AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1235640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1235640 MtrunA17_Chr8g0345671 84.938 405 45 3 1 394 1 400 0.0 689
Msa1235640 MtrunA17_Chr8g0345691 60.870 437 108 8 1 392 1 419 9.21e-173 488
Msa1235640 MtrunA17_Chr8g0345711 66.000 150 48 2 1 147 1 150 8.17e-66 207
Msa1235640 MtrunA17_Chr8g0345731 66.897 145 44 2 8 148 22 166 1.17e-65 206
Msa1235640 MtrunA17_Chr8g0345721 57.143 175 46 1 1 146 26 200 1.86e-62 199
Msa1235640 MtrunA17_Chr8g0345741 69.048 126 39 0 21 146 2 127 1.81e-59 190
Msa1235640 MtrunA17_Chr8g0345701 57.616 151 46 5 10 146 7 153 3.73e-49 164
Msa1235640 MtrunA17_Chr5g0428991 61.194 134 48 3 8 140 23 153 1.42e-47 171
Msa1235640 MtrunA17_Chr3g0128111 53.939 165 61 6 13 165 45 206 8.87e-47 160
Msa1235640 MtrunA17_Chr3g0128151 59.701 134 50 4 8 140 20 150 2.46e-46 167
Msa1235640 MtrunA17_Chr2g0309891 57.364 129 51 3 10 137 6 131 6.31e-42 150
Msa1235640 MtrunA17_Chr6g0481091 51.351 148 65 4 10 156 6 147 1.05e-41 147
Msa1235640 MtrunA17_Chr7g0252971 36.929 241 126 7 6 236 4 228 2.76e-40 145
Msa1235640 MtrunA17_Chr5g0433781 57.364 129 51 3 10 137 6 131 3.84e-40 150
Msa1235640 MtrunA17_Chr2g0318101 40.500 200 103 6 10 199 15 208 4.75e-39 143
Msa1235640 MtrunA17_Chr4g0047841 47.468 158 78 4 6 162 11 164 5.07e-39 142
Msa1235640 MtrunA17_Chr3g0109821 57.364 129 51 3 10 137 6 131 5.73e-39 147
Msa1235640 MtrunA17_Chr1g0197361 56.349 126 52 2 13 137 11 134 1.05e-38 146
Msa1235640 MtrunA17_Chr5g0400461 51.852 135 58 3 10 138 6 139 1.11e-37 139
Msa1235640 MtrunA17_Chr4g0054791 38.756 209 101 5 10 192 6 213 1.11e-36 135
Msa1235640 MtrunA17_Chr3g0130731 49.673 153 68 5 10 161 7 151 1.84e-36 134
Msa1235640 MtrunA17_Chr2g0316971 53.846 130 56 3 9 137 22 148 2.23e-36 136
Msa1235640 MtrunA17_Chr5g0398971 50.355 141 64 5 3 141 2 138 4.90e-36 134
Msa1235640 MtrunA17_Chr8g0384721 45.098 153 77 4 10 161 7 153 5.70e-36 133
Msa1235640 MtrunA17_Chr8g0385991 43.506 154 80 4 10 161 14 162 1.42e-35 130
Msa1235640 MtrunA17_Chr8g0361731 45.517 145 75 3 13 156 17 158 2.85e-35 134
Msa1235640 MtrunA17_Chr3g0124761 46.405 153 74 5 10 161 7 152 3.21e-35 131
Msa1235640 MtrunA17_Chr4g0018391 49.645 141 64 5 3 141 2 137 4.80e-35 132
Msa1235640 MtrunA17_Chr2g0326361 41.176 170 93 4 11 176 15 181 5.05e-35 131
Msa1235640 MtrunA17_Chr3g0092671 53.846 130 57 2 9 137 4 131 9.89e-35 134
Msa1235640 MtrunA17_Chr3g0130101 50.000 126 59 3 13 137 10 132 9.92e-35 131
Msa1235640 MtrunA17_Chr6g0484441 51.938 129 56 4 10 137 5 128 1.62e-34 130
Msa1235640 MtrunA17_Chr1g0147421 50.388 129 61 2 10 137 27 153 2.42e-34 130
Msa1235640 MtrunA17_Chr8g0364791 42.000 150 79 5 13 161 9 151 3.54e-34 131
Msa1235640 MtrunA17_Chr4g0042561 51.163 129 57 4 10 137 9 132 4.07e-34 127
Msa1235640 MtrunA17_Chr7g0214071 48.175 137 64 3 10 145 15 145 4.92e-34 127
Msa1235640 MtrunA17_Chr3g0139331 43.820 178 88 6 10 183 11 180 5.37e-34 129
Msa1235640 MtrunA17_Chr7g0263931 45.926 135 67 4 6 137 5 136 7.61e-34 128
Msa1235640 MtrunA17_Chr3g0091921 53.488 129 54 5 10 137 16 139 8.16e-34 127
Msa1235640 MtrunA17_Chr2g0318081 51.163 129 57 4 10 137 16 139 1.17e-33 128
Msa1235640 MtrunA17_Chr4g0056541 48.905 137 63 5 3 137 2 133 1.27e-33 128
Msa1235640 MtrunA17_Chr1g0197351 54.762 126 53 3 13 137 45 167 1.65e-33 130
Msa1235640 MtrunA17_Chr4g0060931 51.538 130 57 5 10 138 17 141 1.76e-33 128
Msa1235640 MtrunA17_Chr8g0359921 45.098 153 76 5 10 161 14 159 3.26e-33 126
Msa1235640 MtrunA17_Chr7g0217721 55.118 127 51 5 12 137 21 142 3.78e-33 127
Msa1235640 MtrunA17_Chr1g0183741 47.368 133 66 3 10 141 10 139 5.17e-33 124
Msa1235640 MtrunA17_Chr7g0261411 46.617 133 67 3 10 141 10 139 7.04e-33 125
Msa1235640 MtrunA17_Chr8g0372121 45.985 137 69 4 10 144 6 139 7.94e-33 125
Msa1235640 MtrunA17_Chr7g0217711 53.543 127 53 5 12 137 21 142 8.51e-33 121
Msa1235640 MtrunA17_Chr6g0453131 45.517 145 74 4 13 156 18 158 1.12e-32 126
Msa1235640 MtrunA17_Chr3g0144271 48.529 136 65 3 10 142 23 156 1.32e-32 127
Msa1235640 MtrunA17_Chr6g0453451 51.938 129 56 4 10 137 20 143 1.37e-32 124
Msa1235640 MtrunA17_Chr2g0312321 48.462 130 59 4 10 138 11 133 1.66e-32 124
Msa1235640 MtrunA17_Chr5g0405211 48.855 131 62 4 10 138 8 135 1.79e-32 125
Msa1235640 MtrunA17_Chr1g0200561 42.857 154 77 5 10 161 19 163 1.80e-32 125
Msa1235640 MtrunA17_Chr4g0017921 50.769 130 59 4 10 137 8 134 1.94e-32 125
Msa1235640 MtrunA17_Chr4g0076731 48.507 134 60 5 7 137 51 178 2.11e-32 126
Msa1235640 MtrunA17_Chr2g0309331 45.455 154 74 6 10 161 10 155 2.99e-32 124
Msa1235640 MtrunA17_Chr1g0201021 52.381 126 56 3 13 137 22 144 3.72e-32 127
Msa1235640 MtrunA17_Chr7g0253011 48.855 131 61 4 10 137 17 144 4.70e-32 124
Msa1235640 MtrunA17_Chr6g0461661 46.923 130 65 3 10 138 18 144 8.32e-32 124
Msa1235640 MtrunA17_Chr2g0321741 55.556 108 43 4 31 137 13 116 2.29e-31 122
Msa1235640 MtrunA17_Chr5g0417001 43.357 143 77 3 13 154 17 156 2.47e-31 122
Msa1235640 MtrunA17_Chr5g0417791 48.462 130 61 5 10 138 3 127 2.90e-31 119
Msa1235640 MtrunA17_Chr8g0384201 40.667 150 81 5 13 161 9 151 2.98e-31 124
Msa1235640 MtrunA17_Chr4g0026141 48.120 133 63 4 11 139 6 136 5.45e-31 119
Msa1235640 MtrunA17_Chr2g0311661 47.727 132 63 5 10 137 20 149 1.16e-30 119
Msa1235640 MtrunA17_Chr2g0311651 46.970 132 64 5 10 137 21 150 2.24e-30 118
Msa1235640 MtrunA17_Chr8g0346001 47.101 138 65 5 10 145 15 146 2.69e-30 120
Msa1235640 MtrunA17_Chr2g0321631 44.928 138 71 4 11 144 5 141 7.15e-29 113
Msa1235640 MtrunA17_Chr4g0038751 46.457 127 63 4 13 137 18 141 1.92e-28 113
Msa1235640 MtrunA17_Chr3g0131911 38.217 157 87 5 10 161 14 165 4.32e-28 110
Msa1235640 MtrunA17_Chr5g0442771 46.457 127 63 4 13 137 21 144 1.24e-27 111
Msa1235640 MtrunA17_Chr7g0266701 38.514 148 84 5 10 152 4 149 1.11e-22 96.3
Msa1235640 MtrunA17_Chr3g0113001 50.633 79 36 3 61 138 13 89 2.41e-17 82.0
Msa1235640 MtrunA17_Chr4g0050701 35.115 131 69 5 10 137 11 128 1.45e-16 77.4
Msa1235640 MtrunA17_Chr7g0243371 42.353 85 47 2 56 138 6 90 1.49e-16 75.5
Msa1235640 MtrunA17_Chr3g0130321 32.738 168 97 6 10 170 7 165 4.02e-16 76.6
Msa1235640 MtrunA17_Chr8g0384351 35.036 137 68 6 10 145 10 126 9.62e-14 69.3
Msa1235640 MtrunA17_Chr7g0251651 32.558 129 81 4 10 137 18 141 1.17e-13 69.3
Msa1235640 MtrunA17_Chr7g0251661 33.077 130 79 5 10 137 10 133 8.68e-12 63.2
Msa1235640 MtrunA17_Chr3g0113011 62.500 48 17 1 11 58 20 66 9.37e-12 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1235640 AT4G35580.2 62.963 135 46 3 10 143 9 140 1.50e-51 181
Msa1235640 AT4G35580.3 62.963 135 46 3 10 143 9 140 1.63e-51 181
Msa1235640 AT4G35580.1 62.963 135 46 3 10 143 9 140 2.02e-51 180
Msa1235640 AT1G33060.1 60.606 132 48 3 10 140 24 152 1.89e-48 174
Msa1235640 AT1G33060.2 60.606 132 48 3 10 140 24 152 2.04e-48 174
Msa1235640 AT3G49530.2 56.296 135 56 3 10 143 13 145 2.87e-46 164
Msa1235640 AT3G49530.1 56.296 135 56 3 10 143 13 145 9.60e-46 164
Msa1235640 AT4G01550.1 42.601 223 105 7 12 225 6 214 4.28e-45 162
Msa1235640 AT5G24590.2 55.556 135 57 3 10 143 13 145 8.57e-45 160
Msa1235640 AT5G17260.1 60.465 129 47 3 10 137 6 131 3.36e-44 160
Msa1235640 AT3G03200.1 59.690 129 48 3 10 137 6 131 4.59e-43 157
Msa1235640 AT3G17730.1 56.154 130 53 3 10 138 6 132 8.88e-42 147
Msa1235640 AT4G17980.1 50.360 139 67 2 10 147 6 143 7.17e-41 145
Msa1235640 AT1G65910.1 58.915 129 49 3 10 137 6 131 1.53e-40 152
Msa1235640 AT4G17980.2 50.360 139 67 2 10 147 6 143 2.36e-40 145
Msa1235640 AT4G01520.1 38.813 219 108 7 11 206 5 220 5.82e-40 144
Msa1235640 AT3G10480.1 53.030 132 58 3 13 143 30 158 3.00e-39 145
Msa1235640 AT3G10480.2 53.030 132 58 3 13 143 30 158 3.17e-39 145
Msa1235640 AT4G01540.4 38.991 218 107 7 12 206 6 220 8.95e-39 143
Msa1235640 AT3G10490.1 52.273 132 59 3 13 143 30 158 1.14e-38 139
Msa1235640 AT4G01540.2 37.838 222 104 7 12 206 6 220 1.70e-38 143
Msa1235640 AT4G01540.3 38.991 218 107 7 12 206 6 220 2.21e-38 143
Msa1235640 AT1G02230.1 48.366 153 68 4 11 154 4 154 2.41e-38 141
Msa1235640 AT1G01720.1 46.405 153 75 4 10 161 7 153 2.62e-38 139
Msa1235640 AT4G01540.1 37.838 222 104 7 12 206 6 220 3.47e-38 143
Msa1235640 AT3G10490.2 52.273 132 59 3 13 143 30 158 4.90e-38 142
Msa1235640 AT5G08790.1 47.059 153 74 4 10 161 7 153 7.43e-38 138
Msa1235640 AT5G46590.2 48.630 146 72 3 10 154 6 149 9.57e-38 138
Msa1235640 AT5G46590.1 49.645 141 68 3 10 149 6 144 2.33e-37 137
Msa1235640 AT3G04070.2 49.645 141 64 4 1 137 1 138 2.96e-37 138
Msa1235640 AT5G53950.1 55.385 130 54 3 9 137 16 142 3.17e-37 139
Msa1235640 AT1G12260.2 49.645 141 64 5 3 141 2 137 3.59e-37 138
Msa1235640 AT3G04070.1 49.645 141 64 4 1 137 1 138 5.89e-37 137
Msa1235640 AT1G12260.1 49.645 141 64 5 3 141 2 137 7.53e-37 138
Msa1235640 AT5G09330.5 48.667 150 69 5 13 161 9 151 3.68e-36 138
Msa1235640 AT5G09330.2 48.667 150 69 5 13 161 9 151 3.68e-36 138
Msa1235640 AT5G09330.4 48.667 150 69 5 13 161 9 151 3.68e-36 138
Msa1235640 AT5G09330.3 48.667 150 69 5 13 161 9 151 3.68e-36 138
Msa1235640 AT5G09330.1 48.667 150 69 5 13 161 9 151 3.68e-36 138
Msa1235640 AT5G39610.1 53.788 132 55 5 7 137 17 143 4.36e-36 133
Msa1235640 AT1G54330.1 54.545 132 56 3 10 140 6 134 5.30e-36 134
Msa1235640 AT3G29035.1 52.985 134 47 6 10 137 24 147 7.98e-36 134
Msa1235640 AT5G66300.1 50.758 132 60 4 10 139 12 140 2.64e-35 132
Msa1235640 AT5G39820.1 48.148 135 66 3 13 146 23 154 4.06e-35 132
Msa1235640 AT5G61430.1 53.488 129 54 5 10 137 16 139 4.06e-35 132
Msa1235640 AT5G63790.2 35.249 261 136 8 10 248 60 309 7.19e-35 131
Msa1235640 AT5G63790.1 35.249 261 136 8 10 248 50 299 8.50e-35 130
Msa1235640 AT1G61110.1 47.712 153 69 6 7 156 13 157 1.19e-34 130
Msa1235640 AT5G07680.2 53.488 129 54 5 10 137 3 126 1.23e-34 130
Msa1235640 AT5G07680.1 53.488 129 54 5 10 137 17 140 1.24e-34 130
Msa1235640 AT3G18400.1 51.163 129 57 4 10 137 5 128 1.25e-34 130
Msa1235640 AT3G15510.1 41.954 174 87 5 14 176 21 191 1.25e-34 131
Msa1235640 AT3G15500.1 51.163 129 57 4 10 137 14 137 1.46e-34 130
Msa1235640 AT3G15170.1 51.938 129 58 3 10 137 20 145 2.12e-34 129
Msa1235640 AT1G62700.1 43.169 183 87 7 3 173 2 179 2.56e-34 131
Msa1235640 AT1G62700.2 43.169 183 87 7 3 173 2 179 2.56e-34 131
Msa1235640 AT5G64060.1 46.897 145 70 4 13 156 9 147 3.58e-34 130
Msa1235640 AT5G04395.1 42.405 158 77 4 1 145 19 175 3.93e-34 125
Msa1235640 AT5G04410.1 54.331 127 54 3 13 138 12 135 4.53e-34 133
Msa1235640 AT1G71930.2 44.805 154 74 5 10 161 9 153 7.12e-34 129
Msa1235640 AT1G71930.1 44.805 154 74 5 10 161 9 153 7.12e-34 129
Msa1235640 AT2G24430.2 44.444 153 76 4 10 161 16 160 7.47e-34 128
Msa1235640 AT2G24430.1 44.444 153 76 4 10 161 16 160 7.47e-34 128
Msa1235640 AT3G04060.1 51.938 129 57 4 10 137 20 144 7.70e-34 129
Msa1235640 AT1G69490.1 47.552 143 66 6 10 151 9 143 7.92e-34 127
Msa1235640 AT3G10500.1 55.556 126 52 4 13 137 12 134 1.02e-33 132
Msa1235640 AT3G44290.2 48.551 138 60 5 1 137 11 138 1.05e-33 125
Msa1235640 AT4G27410.2 49.612 129 59 4 10 137 14 137 1.07e-33 127
Msa1235640 AT1G32510.1 43.750 160 80 4 8 161 4 159 1.50e-33 127
Msa1235640 AT1G52890.1 51.163 129 57 4 10 137 14 137 1.53e-33 127
Msa1235640 AT1G76420.1 48.062 129 63 3 10 137 22 147 1.77e-33 128
Msa1235640 AT1G34180.3 52.381 126 56 3 13 137 19 141 2.59e-33 129
Msa1235640 AT1G34190.1 48.611 144 67 4 13 155 19 156 2.84e-33 131
Msa1235640 AT1G26870.1 49.206 126 60 3 13 137 19 141 4.39e-33 128
Msa1235640 AT2G27300.1 50.000 126 58 4 13 137 17 138 5.07e-33 126
Msa1235640 AT1G34180.1 48.611 144 67 4 13 155 19 156 5.28e-33 130
Msa1235640 AT4G10350.1 48.921 139 66 4 10 146 9 144 5.64e-33 126
Msa1235640 AT2G33480.1 50.769 130 55 4 10 138 15 136 8.79e-33 124
Msa1235640 AT2G33480.2 50.769 130 55 4 10 138 15 136 9.20e-33 124
Msa1235640 AT5G18270.2 51.163 129 58 4 10 137 21 145 1.18e-32 125
Msa1235640 AT3G10480.3 43.030 165 57 5 13 143 30 191 1.33e-32 129
Msa1235640 AT3G44290.1 48.551 138 60 5 1 137 11 138 1.57e-32 125
Msa1235640 AT1G77450.1 44.079 152 77 5 11 161 11 155 2.31e-32 122
Msa1235640 AT5G13180.1 46.154 130 63 3 10 138 14 137 2.80e-32 122
Msa1235640 AT5G62380.2 46.667 135 67 4 9 141 6 137 2.88e-32 125
Msa1235640 AT5G62380.1 46.667 135 67 4 9 141 6 137 2.88e-32 125
Msa1235640 AT5G18270.1 50.388 129 59 4 10 137 21 145 3.11e-32 124
Msa1235640 AT1G02250.1 46.377 138 70 3 11 146 4 139 3.52e-32 125
Msa1235640 AT2G18060.3 48.092 131 63 4 10 138 9 136 4.88e-32 124
Msa1235640 AT2G18060.1 48.092 131 63 4 10 138 9 136 4.88e-32 124
Msa1235640 AT1G33280.1 47.826 138 67 4 10 145 8 142 7.50e-32 122
Msa1235640 AT5G22290.1 47.407 135 64 5 13 144 24 154 7.58e-32 123
Msa1235640 AT4G36160.2 47.692 130 63 4 10 137 14 140 1.26e-31 124
Msa1235640 AT2G02450.1 43.275 171 85 7 13 177 54 218 1.28e-31 124
Msa1235640 AT4G36160.1 47.692 130 63 4 10 137 10 136 1.35e-31 124
Msa1235640 AT4G36160.3 47.692 130 63 4 10 137 10 136 1.35e-31 124
Msa1235640 AT3G12910.1 47.407 135 65 4 13 144 24 155 1.49e-31 122
Msa1235640 AT1G56010.2 47.287 129 63 3 10 137 19 143 1.97e-31 122
Msa1235640 AT2G02450.2 43.023 172 88 7 13 179 54 220 1.97e-31 124
Msa1235640 AT2G17040.1 49.219 128 60 4 13 138 9 133 2.96e-31 120
Msa1235640 AT4G27410.3 45.139 144 60 5 10 137 14 154 5.16e-31 120
Msa1235640 AT2G46770.1 47.101 138 65 5 10 145 16 147 1.66e-30 120
Msa1235640 AT3G61910.1 41.290 155 83 5 10 162 11 159 2.84e-30 119
Msa1235640 AT1G34180.4 47.826 138 56 4 13 137 19 153 5.14e-30 120
Msa1235640 AT1G79580.3 48.462 130 63 4 10 137 17 144 5.48e-30 119
Msa1235640 AT1G79580.5 48.462 130 63 4 10 137 17 144 5.48e-30 119
Msa1235640 AT1G79580.4 48.462 130 63 4 10 137 17 144 5.48e-30 119
Msa1235640 AT1G79580.2 48.462 130 63 4 10 137 17 144 5.48e-30 119
Msa1235640 AT1G79580.1 48.462 130 63 4 10 137 17 144 5.48e-30 119
Msa1235640 AT2G43000.1 46.479 142 66 6 13 149 21 157 5.63e-30 117
Msa1235640 AT1G34180.2 44.872 156 67 5 13 155 19 168 8.07e-30 121
Msa1235640 AT1G32770.1 48.485 132 59 5 10 137 16 142 5.79e-29 116
Msa1235640 AT4G28530.1 42.361 144 65 4 10 137 10 151 1.18e-28 115
Msa1235640 AT1G52880.1 51.515 132 54 5 14 140 21 147 2.48e-28 113
Msa1235640 AT3G12977.1 44.275 131 63 5 10 137 18 141 5.41e-28 111
Msa1235640 AT3G04420.2 45.802 131 67 4 11 139 4 132 1.08e-26 108
Msa1235640 AT3G04420.1 45.802 131 67 4 11 139 4 132 1.16e-26 109
Msa1235640 AT5G22380.1 42.963 135 72 4 10 140 5 138 2.34e-26 106
Msa1235640 AT1G02220.1 45.255 137 68 4 11 146 4 134 4.34e-26 108
Msa1235640 AT1G01010.1 43.448 145 72 4 12 148 5 147 5.96e-26 108
Msa1235640 AT1G32870.1 50.794 126 56 4 13 137 13 133 2.35e-25 108
Msa1235640 AT1G32870.2 50.794 126 56 4 13 137 13 133 2.73e-25 107
Msa1235640 AT1G32870.3 50.794 126 56 4 13 137 49 169 3.61e-25 107
Msa1235640 AT3G44350.1 42.857 133 70 4 12 140 7 137 7.17e-25 100
Msa1235640 AT3G44350.2 42.857 133 70 4 12 140 7 137 1.54e-24 101
Msa1235640 AT3G04430.1 41.176 136 64 5 16 139 6 137 1.43e-20 89.4
Msa1235640 AT4G28530.2 43.119 109 45 3 10 103 10 116 1.11e-18 86.7
Msa1235640 AT5G61430.2 53.165 79 34 3 61 138 1 77 2.22e-18 84.7
Msa1235640 AT4G10350.2 47.191 89 44 2 59 146 11 97 1.36e-17 82.8
Msa1235640 AT5G64530.2 36.923 130 64 5 10 137 3 116 1.38e-17 79.7
Msa1235640 AT3G12977.2 52.113 71 31 2 68 137 20 88 1.85e-17 81.3
Msa1235640 AT1G56010.1 53.521 71 30 2 68 137 8 76 2.10e-17 81.6
Msa1235640 AT5G64530.1 36.923 130 64 5 10 137 3 116 3.55e-17 79.3
Msa1235640 AT2G33480.3 52.703 74 32 2 66 138 8 79 8.64e-17 79.0
Msa1235640 AT3G56530.1 35.065 154 87 7 11 161 53 196 1.40e-14 74.3
Msa1235640 AT4G29230.1 29.412 170 89 9 6 149 42 206 4.95e-12 67.8
Msa1235640 AT4G29230.2 29.268 164 87 8 10 149 47 205 5.70e-12 67.4
Msa1235640 AT4G29230.3 29.268 164 87 8 10 149 48 206 7.18e-12 67.0
Msa1235640 AT3G55210.1 34.043 141 77 7 10 137 11 148 9.87e-12 65.5
Msa1235640 AT5G14490.4 31.818 154 81 6 6 141 51 198 1.27e-11 65.9
Msa1235640 AT5G14490.1 31.818 154 81 6 6 141 54 201 1.36e-11 65.9
Msa1235640 AT5G14490.2 31.818 154 81 6 6 141 51 198 1.93e-11 64.7
Msa1235640 AT5G14490.3 31.818 154 81 6 6 141 54 201 2.31e-11 65.1

Find 69 sgRNAs with CRISPR-Local

Find 214 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCATTTCGAGATGATTTC+GGG 0.227385 8_2:+13749211 Msa1235640:CDS
ACAAATACGCAAATAGTAAA+AGG 0.269504 8_2:+13748115 Msa1235640:CDS
GCATCATTTCGAGATGATTT+CGG 0.275502 8_2:+13749210 Msa1235640:CDS
TGGTCTTGACCGTAAGATTA+AGG 0.284539 8_2:+13748176 Msa1235640:CDS
GAATATGGAACCAATGTTTC+AGG 0.286511 8_2:+13748666 Msa1235640:CDS
AGAGGTACTGACAATGTTAT+TGG 0.291344 8_2:+13748201 Msa1235640:CDS
TTTACAGTGTGGCAATGTTC+TGG 0.292487 8_2:+13749140 Msa1235640:intron
TTCCTCTTCAGCTTTCTTCT+CGG 0.325142 8_2:-13748445 None:intergenic
TACCACCTTTGATGATAATC+AGG 0.334501 8_2:+13748302 Msa1235640:CDS
CTCCTGGTGTTAAAAGCAAC+TGG 0.345111 8_2:+13748259 Msa1235640:CDS
TACTATAATGGTTGTGCTCC+TGG 0.345726 8_2:+13748243 Msa1235640:CDS
AAAACACTTGTGTACTATAA+TGG 0.357000 8_2:+13748231 Msa1235640:CDS
GACATGGTGGTGGTTGGTCT+TGG 0.361614 8_2:-13749348 None:intergenic
CATATCGATGTGTCCACTTT+CGG 0.387067 8_2:-13748791 None:intergenic
TCGTTGAGAATGATTTACTA+TGG 0.400930 8_2:+13748952 Msa1235640:CDS
CTTCTTGAACATCCTAGTTC+AGG 0.401435 8_2:+13749177 Msa1235640:CDS
GAGGTACTGACAATGTTATT+GGG 0.406699 8_2:+13748202 Msa1235640:CDS
TGATGAGGTTCCTGAAACAT+TGG 0.411707 8_2:-13748676 None:intergenic
TGTTTGCAAGTTTGAACCTT+GGG 0.419989 8_2:+13747951 Msa1235640:CDS
GAAGGACACAGTGTGGATAC+TGG 0.428296 8_2:+13748145 Msa1235640:CDS
GACCGTAAGATTAAGGTTAG+AGG 0.442904 8_2:+13748183 Msa1235640:CDS
TGGTTGGTCTTGGATGATAC+TGG 0.447272 8_2:-13749338 None:intergenic
TACCTCGCCAGAAAAGAATA+TGG 0.459100 8_2:+13748651 Msa1235640:CDS
CTCGGACTGGACAGGAAAGC+TGG 0.467178 8_2:-13748929 None:intergenic
TCATTCTCAACGACTCGGAC+TGG 0.469733 8_2:-13748942 None:intergenic
CCTCATAACTATGTTCCTGT+TGG 0.475870 8_2:+13747826 Msa1235640:CDS
CAATTGTTTCAGGTAATATG+TGG 0.486296 8_2:+13748628 Msa1235640:intron
TTTACAAGCTCTTCATCTGT+TGG 0.494683 8_2:-13747862 None:intergenic
GATAGAATGGTATGTGATGA+AGG 0.494733 8_2:+13748471 Msa1235640:CDS
GGACGGAATCTGAATCCAAC+AGG 0.495067 8_2:-13747841 None:intergenic
TACCTCTAACCTTAATCTTA+CGG 0.495515 8_2:-13748185 None:intergenic
TCGGAACTCATGTGTCTACT+TGG 0.499283 8_2:-13748498 None:intergenic
TTCAATCTCTGAAAATGAGA+TGG 0.499943 8_2:+13748735 Msa1235640:CDS
AGCTATAAAATTGTTGACAA+TGG 0.512549 8_2:-13747920 None:intergenic
TGAAGAGGAAACTGATAGAA+TGG 0.513653 8_2:+13748458 Msa1235640:CDS
TTTGAACCTTGGGACTTACC+AGG 0.514968 8_2:+13747961 Msa1235640:CDS
GAAAATCAAGAAACAGTTGA+AGG 0.516420 8_2:+13748525 Msa1235640:CDS
CCAACAGGAACATAGTTATG+AGG 0.518146 8_2:-13747826 None:intergenic
AGCCGAGAAGAAAGCTGAAG+AGG 0.521986 8_2:+13748443 Msa1235640:CDS
TTGTTTCTTCGTAGAGTGGA+AGG 0.522631 8_2:-13749312 None:intergenic
GAAGCATCTTTATCGAACTC+AGG 0.527450 8_2:+13748757 Msa1235640:CDS
GTTATTGTTTCTTCGTAGAG+TGG 0.529521 8_2:-13749316 None:intergenic
ATCAATTCAATGTTAAATGA+CGG 0.532646 8_2:+13748853 Msa1235640:CDS
TGCTGAATTAGTCTCTATGC+CGG 0.535468 8_2:+13748990 Msa1235640:CDS
TCCTCATCAATAGTTTCGAA+CGG 0.541580 8_2:-13748820 None:intergenic
TATTTACCTGGTAAGTCCCA+AGG 0.553197 8_2:-13747967 None:intergenic
CTCAACGACTCGGACTGGAC+AGG 0.555897 8_2:-13748937 None:intergenic
AAGCATCTTTATCGAACTCA+GGG 0.557608 8_2:+13748758 Msa1235640:CDS
CAAGCTCTTCATCTGTTGGA+CGG 0.560584 8_2:-13747858 None:intergenic
CAATGTTCTGGATACTTCAA+CGG 0.563840 8_2:+13749152 Msa1235640:CDS
ATGTTTGCAAGTTTGAACCT+TGG 0.568862 8_2:+13747950 Msa1235640:CDS
ATAGTAAAAGGTTTAACAGA+AGG 0.579914 8_2:+13748127 Msa1235640:CDS
ATAGAATGGTATGTGATGAA+GGG 0.580154 8_2:+13748472 Msa1235640:CDS
ACAAACCTGATTATCATCAA+AGG 0.588827 8_2:-13748307 None:intergenic
TGTGGATACTGGAAAGCCAC+TGG 0.602459 8_2:+13748156 Msa1235640:CDS
TCCTGGTGTTAAAAGCAACT+GGG 0.605841 8_2:+13748260 Msa1235640:CDS
TTGCAATTGATCATCTCTAG+AGG 0.607895 8_2:-13749273 None:intergenic
TCCGTTCGAAACTATTGATG+AGG 0.608684 8_2:+13748819 Msa1235640:CDS
ATGATTTACTATGGAAGCAG+TGG 0.614801 8_2:+13748961 Msa1235640:CDS
AATCTTACGGTCAAGACCAG+TGG 0.626820 8_2:-13748172 None:intergenic
GAAGACTGGTATGTTGACAA+AGG 0.640048 8_2:-13748715 None:intergenic
TAGAATGGTATGTGATGAAG+GGG 0.641183 8_2:+13748473 Msa1235640:CDS
TAAAATCCGATGATCCCGAA+TGG 0.649145 8_2:+13748070 Msa1235640:CDS
ATCATTTCGAGATGATTTCG+GGG 0.650121 8_2:+13749212 Msa1235640:CDS
AACCTGATTATCATCAAAGG+TGG 0.653329 8_2:-13748304 None:intergenic
GTAAATCATTCTCAACGACT+CGG 0.660341 8_2:-13748947 None:intergenic
TCATTTCGAGATGATTTCGG+GGG 0.671935 8_2:+13749213 Msa1235640:CDS
TTTGCGTATTTGTAATCACG+AGG 0.676971 8_2:-13748105 None:intergenic
TTTAACAGAAGGACACAGTG+TGG 0.694289 8_2:+13748138 Msa1235640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATGAAAAAATAATGAT+GGG - chr8_2:13748003-13748022 None:intergenic 10.0%
!!! TTTTTATGAAAAAATAATGA+TGG - chr8_2:13748004-13748023 None:intergenic 10.0%
!!! TTTTATGAAAAAATAATGAT+GGG - chr8_2:13748003-13748022 None:intergenic 10.0%
!!! TTTTTATGAAAAAATAATGA+TGG - chr8_2:13748004-13748023 None:intergenic 10.0%
!! TTTATGAAAAAATAATGATG+GGG - chr8_2:13748002-13748021 None:intergenic 15.0%
!! TTTAATATCATTCATTCATT+TGG - chr8_2:13749037-13749056 None:intergenic 15.0%
!! TTTATGAAAAAATAATGATG+GGG - chr8_2:13748002-13748021 None:intergenic 15.0%
!! TTTAATATCATTCATTCATT+TGG - chr8_2:13749037-13749056 None:intergenic 15.0%
!! ATCAATTCAATGTTAAATGA+CGG + chr8_2:13748853-13748872 Msa1235640:CDS 20.0%
!! ATCAATTCAATGTTAAATGA+CGG + chr8_2:13748853-13748872 Msa1235640:CDS 20.0%
! TATCTCAAAAACAAGTTACT+TGG + chr8_2:13747889-13747908 Msa1235640:CDS 25.0%
! AGCTATAAAATTGTTGACAA+TGG - chr8_2:13747923-13747942 None:intergenic 25.0%
! ACAAATACGCAAATAGTAAA+AGG + chr8_2:13748115-13748134 Msa1235640:CDS 25.0%
! ATAGTAAAAGGTTTAACAGA+AGG + chr8_2:13748127-13748146 Msa1235640:CDS 25.0%
! AAAACACTTGTGTACTATAA+TGG + chr8_2:13748231-13748250 Msa1235640:CDS 25.0%
!!! AAATGACGGATATTTTGTTA+AGG + chr8_2:13748867-13748886 Msa1235640:CDS 25.0%
!! TTTTGAGCAGAAATATTTAC+CGG - chr8_2:13749012-13749031 None:intergenic 25.0%
!!! CTTATTTTTGAACAAGTACT+TGG + chr8_2:13749067-13749086 Msa1235640:intron 25.0%
!! TTCTTCTAAATTTTACAGTG+TGG + chr8_2:13749129-13749148 Msa1235640:intron 25.0%
! TATCTCAAAAACAAGTTACT+TGG + chr8_2:13747889-13747908 Msa1235640:CDS 25.0%
! AGCTATAAAATTGTTGACAA+TGG - chr8_2:13747923-13747942 None:intergenic 25.0%
! ACAAATACGCAAATAGTAAA+AGG + chr8_2:13748115-13748134 Msa1235640:CDS 25.0%
! ATAGTAAAAGGTTTAACAGA+AGG + chr8_2:13748127-13748146 Msa1235640:CDS 25.0%
! AAAACACTTGTGTACTATAA+TGG + chr8_2:13748231-13748250 Msa1235640:CDS 25.0%
!!! AAATGACGGATATTTTGTTA+AGG + chr8_2:13748867-13748886 Msa1235640:CDS 25.0%
!! TTTTGAGCAGAAATATTTAC+CGG - chr8_2:13749012-13749031 None:intergenic 25.0%
!!! CTTATTTTTGAACAAGTACT+TGG + chr8_2:13749067-13749086 Msa1235640:intron 25.0%
!! TTCTTCTAAATTTTACAGTG+TGG + chr8_2:13749129-13749148 Msa1235640:intron 25.0%
!!! GTAACTTGTTTTTGAGATAG+TGG - chr8_2:13747888-13747907 None:intergenic 30.0%
AGGACTAAAGAAAAACCATT+CGG - chr8_2:13748088-13748107 None:intergenic 30.0%
TACCTCTAACCTTAATCTTA+CGG - chr8_2:13748188-13748207 None:intergenic 30.0%
ACAAACCTGATTATCATCAA+AGG - chr8_2:13748310-13748329 None:intergenic 30.0%
ATGTTTCAACTTCATGAGTA+CGG + chr8_2:13748342-13748361 Msa1235640:intron 30.0%
GTTGATTATCCTCCAAAATT+TGG + chr8_2:13748385-13748404 Msa1235640:intron 30.0%
! AAAAGTCCTCTACCAAATTT+TGG - chr8_2:13748400-13748419 None:intergenic 30.0%
ATAGAATGGTATGTGATGAA+GGG + chr8_2:13748472-13748491 Msa1235640:CDS 30.0%
! TGTTTCTTGATTTTCGTGAT+CGG - chr8_2:13748520-13748539 None:intergenic 30.0%
GAAAATCAAGAAACAGTTGA+AGG + chr8_2:13748525-13748544 Msa1235640:CDS 30.0%
AAGAATGAAATCCTTACATC+AGG - chr8_2:13748555-13748574 None:intergenic 30.0%
ACTTGTTTGTCAATTGTTTC+AGG + chr8_2:13748618-13748637 Msa1235640:intron 30.0%
! CAATTGTTTCAGGTAATATG+TGG + chr8_2:13748628-13748647 Msa1235640:intron 30.0%
!! ATTGGTTCCATATTCTTTTC+TGG - chr8_2:13748661-13748680 None:intergenic 30.0%
!!! TGACAAAGGAAAGTACTTTT+CGG - chr8_2:13748704-13748723 None:intergenic 30.0%
! TTCAATCTCTGAAAATGAGA+TGG + chr8_2:13748735-13748754 Msa1235640:CDS 30.0%
TCGTTGAGAATGATTTACTA+TGG + chr8_2:13748952-13748971 Msa1235640:CDS 30.0%
! ATGAAATCTCTAAGTTGAGT+TGG + chr8_2:13749095-13749114 Msa1235640:intron 30.0%
!!! GTAACTTGTTTTTGAGATAG+TGG - chr8_2:13747888-13747907 None:intergenic 30.0%
AGGACTAAAGAAAAACCATT+CGG - chr8_2:13748088-13748107 None:intergenic 30.0%
TACCTCTAACCTTAATCTTA+CGG - chr8_2:13748188-13748207 None:intergenic 30.0%
ACAAACCTGATTATCATCAA+AGG - chr8_2:13748310-13748329 None:intergenic 30.0%
ATGTTTCAACTTCATGAGTA+CGG + chr8_2:13748342-13748361 Msa1235640:intron 30.0%
GTTGATTATCCTCCAAAATT+TGG + chr8_2:13748385-13748404 Msa1235640:intron 30.0%
! AAAAGTCCTCTACCAAATTT+TGG - chr8_2:13748400-13748419 None:intergenic 30.0%
ATAGAATGGTATGTGATGAA+GGG + chr8_2:13748472-13748491 Msa1235640:CDS 30.0%
! TGTTTCTTGATTTTCGTGAT+CGG - chr8_2:13748520-13748539 None:intergenic 30.0%
GAAAATCAAGAAACAGTTGA+AGG + chr8_2:13748525-13748544 Msa1235640:CDS 30.0%
AAGAATGAAATCCTTACATC+AGG - chr8_2:13748555-13748574 None:intergenic 30.0%
ACTTGTTTGTCAATTGTTTC+AGG + chr8_2:13748618-13748637 Msa1235640:intron 30.0%
! CAATTGTTTCAGGTAATATG+TGG + chr8_2:13748628-13748647 Msa1235640:intron 30.0%
!! ATTGGTTCCATATTCTTTTC+TGG - chr8_2:13748661-13748680 None:intergenic 30.0%
!!! TGACAAAGGAAAGTACTTTT+CGG - chr8_2:13748704-13748723 None:intergenic 30.0%
! TTCAATCTCTGAAAATGAGA+TGG + chr8_2:13748735-13748754 Msa1235640:CDS 30.0%
TCGTTGAGAATGATTTACTA+TGG + chr8_2:13748952-13748971 Msa1235640:CDS 30.0%
! ATGAAATCTCTAAGTTGAGT+TGG + chr8_2:13749095-13749114 Msa1235640:intron 30.0%
TTTACAAGCTCTTCATCTGT+TGG - chr8_2:13747865-13747884 None:intergenic 35.0%
ATGTTTGCAAGTTTGAACCT+TGG + chr8_2:13747950-13747969 Msa1235640:CDS 35.0%
TGTTTGCAAGTTTGAACCTT+GGG + chr8_2:13747951-13747970 Msa1235640:CDS 35.0%
! GGGTTTGTTTGATATTTACC+TGG - chr8_2:13747982-13748001 None:intergenic 35.0%
GGACTAAAGAAAAACCATTC+GGG - chr8_2:13748087-13748106 None:intergenic 35.0%
TTTGCGTATTTGTAATCACG+AGG - chr8_2:13748108-13748127 None:intergenic 35.0%
!! AGAGGTACTGACAATGTTAT+TGG + chr8_2:13748201-13748220 Msa1235640:CDS 35.0%
!! GAGGTACTGACAATGTTATT+GGG + chr8_2:13748202-13748221 Msa1235640:CDS 35.0%
! TACCACCTTTGATGATAATC+AGG + chr8_2:13748302-13748321 Msa1235640:CDS 35.0%
AACCTGATTATCATCAAAGG+TGG - chr8_2:13748307-13748326 None:intergenic 35.0%
TATCCTCCAAAATTTGGTAG+AGG + chr8_2:13748391-13748410 Msa1235640:intron 35.0%
TGAAGAGGAAACTGATAGAA+TGG + chr8_2:13748458-13748477 Msa1235640:CDS 35.0%
GATAGAATGGTATGTGATGA+AGG + chr8_2:13748471-13748490 Msa1235640:CDS 35.0%
TAGAATGGTATGTGATGAAG+GGG + chr8_2:13748473-13748492 Msa1235640:CDS 35.0%
TTGAAGGAATTCCTGATGTA+AGG + chr8_2:13748541-13748560 Msa1235640:intron 35.0%
GAATATGGAACCAATGTTTC+AGG + chr8_2:13748666-13748685 Msa1235640:CDS 35.0%
! CATTTTCAGAGATTGAAGAC+TGG - chr8_2:13748732-13748751 None:intergenic 35.0%
AAGCATCTTTATCGAACTCA+GGG + chr8_2:13748758-13748777 Msa1235640:CDS 35.0%
TCCTCATCAATAGTTTCGAA+CGG - chr8_2:13748823-13748842 None:intergenic 35.0%
GTAAATCATTCTCAACGACT+CGG - chr8_2:13748950-13748969 None:intergenic 35.0%
ATGATTTACTATGGAAGCAG+TGG + chr8_2:13748961-13748980 Msa1235640:CDS 35.0%
!!! TCTCTAAGTTGAGTTGGTTT+TGG + chr8_2:13749101-13749120 Msa1235640:intron 35.0%
! CAATGTTCTGGATACTTCAA+CGG + chr8_2:13749152-13749171 Msa1235640:CDS 35.0%
GCATCATTTCGAGATGATTT+CGG + chr8_2:13749210-13749229 Msa1235640:CDS 35.0%
CATCATTTCGAGATGATTTC+GGG + chr8_2:13749211-13749230 Msa1235640:CDS 35.0%
ATCATTTCGAGATGATTTCG+GGG + chr8_2:13749212-13749231 Msa1235640:CDS 35.0%
TTGCAATTGATCATCTCTAG+AGG - chr8_2:13749276-13749295 None:intergenic 35.0%
! GTTATTGTTTCTTCGTAGAG+TGG - chr8_2:13749319-13749338 None:intergenic 35.0%
! TGAAGCAGATCTTTTTGACA+TGG - chr8_2:13749367-13749386 None:intergenic 35.0%
TTTACAAGCTCTTCATCTGT+TGG - chr8_2:13747865-13747884 None:intergenic 35.0%
ATGTTTGCAAGTTTGAACCT+TGG + chr8_2:13747950-13747969 Msa1235640:CDS 35.0%
TGTTTGCAAGTTTGAACCTT+GGG + chr8_2:13747951-13747970 Msa1235640:CDS 35.0%
! GGGTTTGTTTGATATTTACC+TGG - chr8_2:13747982-13748001 None:intergenic 35.0%
GGACTAAAGAAAAACCATTC+GGG - chr8_2:13748087-13748106 None:intergenic 35.0%
TTTGCGTATTTGTAATCACG+AGG - chr8_2:13748108-13748127 None:intergenic 35.0%
!! AGAGGTACTGACAATGTTAT+TGG + chr8_2:13748201-13748220 Msa1235640:CDS 35.0%
!! GAGGTACTGACAATGTTATT+GGG + chr8_2:13748202-13748221 Msa1235640:CDS 35.0%
! TACCACCTTTGATGATAATC+AGG + chr8_2:13748302-13748321 Msa1235640:CDS 35.0%
AACCTGATTATCATCAAAGG+TGG - chr8_2:13748307-13748326 None:intergenic 35.0%
TATCCTCCAAAATTTGGTAG+AGG + chr8_2:13748391-13748410 Msa1235640:intron 35.0%
TGAAGAGGAAACTGATAGAA+TGG + chr8_2:13748458-13748477 Msa1235640:CDS 35.0%
GATAGAATGGTATGTGATGA+AGG + chr8_2:13748471-13748490 Msa1235640:CDS 35.0%
TAGAATGGTATGTGATGAAG+GGG + chr8_2:13748473-13748492 Msa1235640:CDS 35.0%
TTGAAGGAATTCCTGATGTA+AGG + chr8_2:13748541-13748560 Msa1235640:intron 35.0%
GAATATGGAACCAATGTTTC+AGG + chr8_2:13748666-13748685 Msa1235640:CDS 35.0%
! CATTTTCAGAGATTGAAGAC+TGG - chr8_2:13748732-13748751 None:intergenic 35.0%
AAGCATCTTTATCGAACTCA+GGG + chr8_2:13748758-13748777 Msa1235640:CDS 35.0%
TCCTCATCAATAGTTTCGAA+CGG - chr8_2:13748823-13748842 None:intergenic 35.0%
GTAAATCATTCTCAACGACT+CGG - chr8_2:13748950-13748969 None:intergenic 35.0%
ATGATTTACTATGGAAGCAG+TGG + chr8_2:13748961-13748980 Msa1235640:CDS 35.0%
!!! TCTCTAAGTTGAGTTGGTTT+TGG + chr8_2:13749101-13749120 Msa1235640:intron 35.0%
! CAATGTTCTGGATACTTCAA+CGG + chr8_2:13749152-13749171 Msa1235640:CDS 35.0%
GCATCATTTCGAGATGATTT+CGG + chr8_2:13749210-13749229 Msa1235640:CDS 35.0%
CATCATTTCGAGATGATTTC+GGG + chr8_2:13749211-13749230 Msa1235640:CDS 35.0%
ATCATTTCGAGATGATTTCG+GGG + chr8_2:13749212-13749231 Msa1235640:CDS 35.0%
TTGCAATTGATCATCTCTAG+AGG - chr8_2:13749276-13749295 None:intergenic 35.0%
! GTTATTGTTTCTTCGTAGAG+TGG - chr8_2:13749319-13749338 None:intergenic 35.0%
! TGAAGCAGATCTTTTTGACA+TGG - chr8_2:13749367-13749386 None:intergenic 35.0%
CCAACAGGAACATAGTTATG+AGG - chr8_2:13747829-13747848 None:intergenic 40.0%
CCTCATAACTATGTTCCTGT+TGG + chr8_2:13747826-13747845 Msa1235640:CDS 40.0%
TATTTACCTGGTAAGTCCCA+AGG - chr8_2:13747970-13747989 None:intergenic 40.0%
TAAAATCCGATGATCCCGAA+TGG + chr8_2:13748070-13748089 Msa1235640:CDS 40.0%
GAAAAACCATTCGGGATCAT+CGG - chr8_2:13748079-13748098 None:intergenic 40.0%
TTTAACAGAAGGACACAGTG+TGG + chr8_2:13748138-13748157 Msa1235640:CDS 40.0%
! TGGTCTTGACCGTAAGATTA+AGG + chr8_2:13748176-13748195 Msa1235640:CDS 40.0%
GACCGTAAGATTAAGGTTAG+AGG + chr8_2:13748183-13748202 Msa1235640:CDS 40.0%
TACTATAATGGTTGTGCTCC+TGG + chr8_2:13748243-13748262 Msa1235640:CDS 40.0%
! TCCTGGTGTTAAAAGCAACT+GGG + chr8_2:13748260-13748279 Msa1235640:CDS 40.0%
! AGTCCTCTACCAAATTTTGG+AGG - chr8_2:13748397-13748416 None:intergenic 40.0%
TTCCTCTTCAGCTTTCTTCT+CGG - chr8_2:13748448-13748467 None:intergenic 40.0%
TACCTCGCCAGAAAAGAATA+TGG + chr8_2:13748651-13748670 Msa1235640:CDS 40.0%
!! TTCCATATTCTTTTCTGGCG+AGG - chr8_2:13748656-13748675 None:intergenic 40.0%
TGATGAGGTTCCTGAAACAT+TGG - chr8_2:13748679-13748698 None:intergenic 40.0%
!! AAGTACTTTTCGGCTTGATG+AGG - chr8_2:13748694-13748713 None:intergenic 40.0%
GAAGACTGGTATGTTGACAA+AGG - chr8_2:13748718-13748737 None:intergenic 40.0%
! GAAGCATCTTTATCGAACTC+AGG + chr8_2:13748757-13748776 Msa1235640:CDS 40.0%
!! GGGTTTTATGATTCCGAAAG+TGG + chr8_2:13748778-13748797 Msa1235640:CDS 40.0%
CATATCGATGTGTCCACTTT+CGG - chr8_2:13748794-13748813 None:intergenic 40.0%
TCCGTTCGAAACTATTGATG+AGG + chr8_2:13748819-13748838 Msa1235640:CDS 40.0%
! TGCTGAATTAGTCTCTATGC+CGG + chr8_2:13748990-13749009 Msa1235640:CDS 40.0%
TTTACAGTGTGGCAATGTTC+TGG + chr8_2:13749140-13749159 Msa1235640:intron 40.0%
CTTCTTGAACATCCTAGTTC+AGG + chr8_2:13749177-13749196 Msa1235640:CDS 40.0%
TCATTTCGAGATGATTTCGG+GGG + chr8_2:13749213-13749232 Msa1235640:CDS 40.0%
! TTGTTTCTTCGTAGAGTGGA+AGG - chr8_2:13749315-13749334 None:intergenic 40.0%
! AGATCTTTTTGACATGGTGG+TGG - chr8_2:13749361-13749380 None:intergenic 40.0%
! AGCAGATCTTTTTGACATGG+TGG - chr8_2:13749364-13749383 None:intergenic 40.0%
CCAACAGGAACATAGTTATG+AGG - chr8_2:13747829-13747848 None:intergenic 40.0%
CCTCATAACTATGTTCCTGT+TGG + chr8_2:13747826-13747845 Msa1235640:CDS 40.0%
TATTTACCTGGTAAGTCCCA+AGG - chr8_2:13747970-13747989 None:intergenic 40.0%
TAAAATCCGATGATCCCGAA+TGG + chr8_2:13748070-13748089 Msa1235640:CDS 40.0%
GAAAAACCATTCGGGATCAT+CGG - chr8_2:13748079-13748098 None:intergenic 40.0%
TTTAACAGAAGGACACAGTG+TGG + chr8_2:13748138-13748157 Msa1235640:CDS 40.0%
! TGGTCTTGACCGTAAGATTA+AGG + chr8_2:13748176-13748195 Msa1235640:CDS 40.0%
GACCGTAAGATTAAGGTTAG+AGG + chr8_2:13748183-13748202 Msa1235640:CDS 40.0%
TACTATAATGGTTGTGCTCC+TGG + chr8_2:13748243-13748262 Msa1235640:CDS 40.0%
! TCCTGGTGTTAAAAGCAACT+GGG + chr8_2:13748260-13748279 Msa1235640:CDS 40.0%
! AGTCCTCTACCAAATTTTGG+AGG - chr8_2:13748397-13748416 None:intergenic 40.0%
TTCCTCTTCAGCTTTCTTCT+CGG - chr8_2:13748448-13748467 None:intergenic 40.0%
TACCTCGCCAGAAAAGAATA+TGG + chr8_2:13748651-13748670 Msa1235640:CDS 40.0%
!! TTCCATATTCTTTTCTGGCG+AGG - chr8_2:13748656-13748675 None:intergenic 40.0%
TGATGAGGTTCCTGAAACAT+TGG - chr8_2:13748679-13748698 None:intergenic 40.0%
!! AAGTACTTTTCGGCTTGATG+AGG - chr8_2:13748694-13748713 None:intergenic 40.0%
GAAGACTGGTATGTTGACAA+AGG - chr8_2:13748718-13748737 None:intergenic 40.0%
! GAAGCATCTTTATCGAACTC+AGG + chr8_2:13748757-13748776 Msa1235640:CDS 40.0%
!! GGGTTTTATGATTCCGAAAG+TGG + chr8_2:13748778-13748797 Msa1235640:CDS 40.0%
CATATCGATGTGTCCACTTT+CGG - chr8_2:13748794-13748813 None:intergenic 40.0%
TCCGTTCGAAACTATTGATG+AGG + chr8_2:13748819-13748838 Msa1235640:CDS 40.0%
! TGCTGAATTAGTCTCTATGC+CGG + chr8_2:13748990-13749009 Msa1235640:CDS 40.0%
TTTACAGTGTGGCAATGTTC+TGG + chr8_2:13749140-13749159 Msa1235640:intron 40.0%
CTTCTTGAACATCCTAGTTC+AGG + chr8_2:13749177-13749196 Msa1235640:CDS 40.0%
TCATTTCGAGATGATTTCGG+GGG + chr8_2:13749213-13749232 Msa1235640:CDS 40.0%
! TTGTTTCTTCGTAGAGTGGA+AGG - chr8_2:13749315-13749334 None:intergenic 40.0%
! AGATCTTTTTGACATGGTGG+TGG - chr8_2:13749361-13749380 None:intergenic 40.0%
! AGCAGATCTTTTTGACATGG+TGG - chr8_2:13749364-13749383 None:intergenic 40.0%
CAAGCTCTTCATCTGTTGGA+CGG - chr8_2:13747861-13747880 None:intergenic 45.0%
TTTGAACCTTGGGACTTACC+AGG + chr8_2:13747961-13747980 Msa1235640:CDS 45.0%
AATCTTACGGTCAAGACCAG+TGG - chr8_2:13748175-13748194 None:intergenic 45.0%
! CTCCTGGTGTTAAAAGCAAC+TGG + chr8_2:13748259-13748278 Msa1235640:CDS 45.0%
!!! ACCCAGTTGCTTTTAACACC+AGG - chr8_2:13748264-13748283 None:intergenic 45.0%
TCGGAACTCATGTGTCTACT+TGG - chr8_2:13748501-13748520 None:intergenic 45.0%
GCATAGTATTCGCCTGAACT+AGG - chr8_2:13749192-13749211 None:intergenic 45.0%
AGATGATTTCGGGGGATTTG+AGG + chr8_2:13749221-13749240 Msa1235640:CDS 45.0%
!! TGGTTGGTCTTGGATGATAC+TGG - chr8_2:13749341-13749360 None:intergenic 45.0%
!!! CTTTTTGACATGGTGGTGGT+TGG - chr8_2:13749357-13749376 None:intergenic 45.0%
CAAGCTCTTCATCTGTTGGA+CGG - chr8_2:13747861-13747880 None:intergenic 45.0%
TTTGAACCTTGGGACTTACC+AGG + chr8_2:13747961-13747980 Msa1235640:CDS 45.0%
AATCTTACGGTCAAGACCAG+TGG - chr8_2:13748175-13748194 None:intergenic 45.0%
! CTCCTGGTGTTAAAAGCAAC+TGG + chr8_2:13748259-13748278 Msa1235640:CDS 45.0%
!!! ACCCAGTTGCTTTTAACACC+AGG - chr8_2:13748264-13748283 None:intergenic 45.0%
TCGGAACTCATGTGTCTACT+TGG - chr8_2:13748501-13748520 None:intergenic 45.0%
GCATAGTATTCGCCTGAACT+AGG - chr8_2:13749192-13749211 None:intergenic 45.0%
AGATGATTTCGGGGGATTTG+AGG + chr8_2:13749221-13749240 Msa1235640:CDS 45.0%
!! TGGTTGGTCTTGGATGATAC+TGG - chr8_2:13749341-13749360 None:intergenic 45.0%
!!! CTTTTTGACATGGTGGTGGT+TGG - chr8_2:13749357-13749376 None:intergenic 45.0%
GGACGGAATCTGAATCCAAC+AGG - chr8_2:13747844-13747863 None:intergenic 50.0%
GAAGGACACAGTGTGGATAC+TGG + chr8_2:13748145-13748164 Msa1235640:CDS 50.0%
TGTGGATACTGGAAAGCCAC+TGG + chr8_2:13748156-13748175 Msa1235640:CDS 50.0%
AGCCGAGAAGAAAGCTGAAG+AGG + chr8_2:13748443-13748462 Msa1235640:CDS 50.0%
! TCATTCTCAACGACTCGGAC+TGG - chr8_2:13748945-13748964 None:intergenic 50.0%
GGACGGAATCTGAATCCAAC+AGG - chr8_2:13747844-13747863 None:intergenic 50.0%
GAAGGACACAGTGTGGATAC+TGG + chr8_2:13748145-13748164 Msa1235640:CDS 50.0%
TGTGGATACTGGAAAGCCAC+TGG + chr8_2:13748156-13748175 Msa1235640:CDS 50.0%
AGCCGAGAAGAAAGCTGAAG+AGG + chr8_2:13748443-13748462 Msa1235640:CDS 50.0%
! TCATTCTCAACGACTCGGAC+TGG - chr8_2:13748945-13748964 None:intergenic 50.0%
!! GACATGGTGGTGGTTGGTCT+TGG - chr8_2:13749351-13749370 None:intergenic 55.0%
!! GACATGGTGGTGGTTGGTCT+TGG - chr8_2:13749351-13749370 None:intergenic 55.0%
! CTCGGACTGGACAGGAAAGC+TGG - chr8_2:13748932-13748951 None:intergenic 60.0%
! CTCAACGACTCGGACTGGAC+AGG - chr8_2:13748940-13748959 None:intergenic 60.0%
! CTCGGACTGGACAGGAAAGC+TGG - chr8_2:13748932-13748951 None:intergenic 60.0%
! CTCAACGACTCGGACTGGAC+AGG - chr8_2:13748940-13748959 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 13747811 13749404 13747811 ID=Msa1235640;Name=Msa1235640
chr8_2 mRNA 13747811 13749404 13747811 ID=Msa1235640-mRNA-1;Parent=Msa1235640;Name=Msa1235640-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0.5|0|1|1|1|5|0|394
chr8_2 exon 13747811 13747982 13747811 ID=Msa1235640-mRNA-1:exon:5303;Parent=Msa1235640-mRNA-1
chr8_2 exon 13748058 13748323 13748058 ID=Msa1235640-mRNA-1:exon:5304;Parent=Msa1235640-mRNA-1
chr8_2 exon 13748441 13748557 13748441 ID=Msa1235640-mRNA-1:exon:5305;Parent=Msa1235640-mRNA-1
chr8_2 exon 13748640 13749011 13748640 ID=Msa1235640-mRNA-1:exon:5306;Parent=Msa1235640-mRNA-1
chr8_2 exon 13749147 13749404 13749147 ID=Msa1235640-mRNA-1:exon:5307;Parent=Msa1235640-mRNA-1
chr8_2 CDS 13747811 13747982 13747811 ID=Msa1235640-mRNA-1:cds;Parent=Msa1235640-mRNA-1
chr8_2 CDS 13748058 13748323 13748058 ID=Msa1235640-mRNA-1:cds;Parent=Msa1235640-mRNA-1
chr8_2 CDS 13748441 13748557 13748441 ID=Msa1235640-mRNA-1:cds;Parent=Msa1235640-mRNA-1
chr8_2 CDS 13748640 13749011 13748640 ID=Msa1235640-mRNA-1:cds;Parent=Msa1235640-mRNA-1
chr8_2 CDS 13749147 13749404 13749147 ID=Msa1235640-mRNA-1:cds;Parent=Msa1235640-mRNA-1
Gene Sequence

>Msa1235640

ATGACAAACTCATTTCCTCATAACTATGTTCCTGTTGGATTCAGATTCCGTCCAACAGATGAAGAGCTTGTAAACCACTATCTCAAAAACAAGTTACTTGGTAATGATTCCATTGTCAACAATTTTATAGCTGAAGTCGATGTTTGCAAGTTTGAACCTTGGGACTTACCAGCTTGTTCAATCATAAAATCCGATGATCCCGAATGGTTTTTCTTTAGTCCTCGTGATTACAAATACGCAAATAGTAAAAGGTTTAACAGAAGGACACAGTGTGGATACTGGAAAGCCACTGGTCTTGACCGTAAGATTAAGGTTAGAGGTACTGACAATGTTATTGGGACTAAGAAAACACTTGTGTACTATAATGGTTGTGCTCCTGGTGTTAAAAGCAACTGGGTGATTCATGAATATCATTCTACCACCTTTGATGATAATCAGAAAGCCGAGAAGAAAGCTGAAGAGGAAACTGATAGAATGGTATGTGATGAAGGGGAGCCAAGTAGACACATGAGTTCCGATCACGAAAATCAAGAAACAGTTGAAGGAATTCCTGATGTAATATGTGGTACCTCGCCAGAAAAGAATATGGAACCAATGTTTCAGGAACCTCATCAAGCCGAAAAGTACTTTCCTTTGTCAACATACCAGTCTTCAATCTCTGAAAATGAGATGGAAGCATCTTTATCGAACTCAGGGTTTTATGATTCCGAAAGTGGACACATCGATATGCAGAGTCCGTTCGAAACTATTGATGAGGAAAATCAGTTCATCAATTCAATGTTAAATGACGGATATTTTGTTAAGGATAATGATATGTATAGCGAACAAAGAAGACACACTTTTGCCAGCTTTCCTGTCCAGTCCGAGTCGTTGAGAATGATTTACTATGGAAGCAGTGGCACAAATGCTGAATTAGTCTCTATGCCGTGTGGCAATGTTCTGGATACTTCAACGGCGCTTCTTGAACATCCTAGTTCAGGCGAATACTATGCATCATTTCGAGATGATTTCGGGGGATTTGAGGCATCATCTTGTGATTCAACTGCAGATAAACCTCTAGAGATGATCAATTGCAATGAAATTTCTAGTGCACCTTCCACTCTACGAAGAAACAATAACCAGTATCATCCAAGACCAACCACCACCATGTCAAAAAGATCTGCTTCAAGACGATCTCAAACATAG
Protein sequence

>Msa1235640

MTNSFPHNYVPVGFRFRPTDEELVNHYLKNKLLGNDSIVNNFIAEVDVCKFEPWDLPACSIIKSDDPEWFFFSPRDYKYANSKRFNRRTQCGYWKATGLDRKIKVRGTDNVIGTKKTLVYYNGCAPGVKSNWVIHEYHSTTFDDNQKAEKKAEEETDRMVCDEGEPSRHMSSDHENQETVEGIPDVICGTSPEKNMEPMFQEPHQAEKYFPLSTYQSSISENEMEASLSNSGFYDSESGHIDMQSPFETIDEENQFINSMLNDGYFVKDNDMYSEQRRHTFASFPVQSESLRMIYYGSSGTNAELVSMPCGNVLDTSTALLEHPSSGEYYASFRDDFGGFEASSCDSTADKPLEMINCNEISSAPSTLRRNNNQYHPRPTTTMSKRSASRRSQT*