AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1235650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1235650 MtrunA17_Chr8g0345691 88.065 310 31 1 1 304 1 310 0.0 540
Msa1235650 MtrunA17_Chr8g0345691 85.135 222 27 1 300 515 198 419 1.71e-126 375
Msa1235650 MtrunA17_Chr8g0345671 66.873 323 85 6 1 304 1 320 1.20e-138 405
Msa1235650 MtrunA17_Chr8g0345671 53.419 234 58 5 300 515 198 398 9.54e-64 213
Msa1235650 MtrunA17_Chr8g0345721 61.017 177 38 2 1 148 26 200 3.95e-69 220
Msa1235650 MtrunA17_Chr8g0345741 69.565 138 42 0 23 160 2 139 9.15e-66 209
Msa1235650 MtrunA17_Chr8g0345711 59.740 154 61 1 1 153 1 154 1.22e-61 199
Msa1235650 MtrunA17_Chr8g0345731 61.039 154 55 2 10 160 22 173 2.46e-61 199
Msa1235650 MtrunA17_Chr5g0428991 43.348 233 104 7 8 229 21 236 1.05e-51 186
Msa1235650 MtrunA17_Chr3g0128151 53.659 164 67 4 8 165 18 178 1.24e-50 182
Msa1235650 MtrunA17_Chr3g0128111 52.071 169 68 5 15 177 45 206 2.95e-50 172
Msa1235650 MtrunA17_Chr8g0345701 56.291 151 48 5 12 148 7 153 7.10e-47 161
Msa1235650 MtrunA17_Chr6g0481091 50.649 154 67 5 12 159 6 156 2.20e-41 148
Msa1235650 MtrunA17_Chr3g0109821 44.505 182 91 4 12 186 6 184 1.43e-40 155
Msa1235650 MtrunA17_Chr5g0400461 44.910 167 83 4 12 170 6 171 1.80e-39 146
Msa1235650 MtrunA17_Chr2g0309891 46.795 156 73 4 12 160 6 158 5.27e-39 145
Msa1235650 MtrunA17_Chr1g0197361 45.029 171 84 5 15 177 11 179 1.04e-37 146
Msa1235650 MtrunA17_Chr5g0433781 44.578 166 83 4 12 171 6 168 1.75e-37 146
Msa1235650 MtrunA17_Chr4g0054791 45.652 184 84 7 12 185 6 183 5.03e-37 139
Msa1235650 MtrunA17_Chr3g0139331 46.405 153 75 4 12 160 11 160 5.17e-37 139
Msa1235650 MtrunA17_Chr4g0018391 45.223 157 78 5 8 159 3 156 1.40e-35 135
Msa1235650 MtrunA17_Chr8g0364791 42.384 151 78 5 15 159 9 156 2.22e-35 137
Msa1235650 MtrunA17_Chr5g0398971 33.220 295 169 11 9 295 4 278 2.24e-35 135
Msa1235650 MtrunA17_Chr2g0318101 40.120 167 80 4 11 160 14 177 6.86e-35 134
Msa1235650 MtrunA17_Chr3g0130101 43.046 151 77 5 15 159 10 157 1.15e-34 133
Msa1235650 MtrunA17_Chr3g0091921 46.497 157 71 7 12 160 16 167 1.19e-34 132
Msa1235650 MtrunA17_Chr2g0316971 50.382 131 61 3 11 140 22 149 2.15e-34 133
Msa1235650 MtrunA17_Chr1g0147421 42.484 153 82 3 12 160 27 177 2.24e-34 132
Msa1235650 MtrunA17_Chr8g0384201 43.046 151 77 5 15 159 9 156 2.39e-34 135
Msa1235650 MtrunA17_Chr2g0326361 44.304 158 75 5 13 160 15 169 6.15e-34 130
Msa1235650 MtrunA17_Chr4g0060931 44.586 157 74 7 12 160 17 168 6.57e-34 131
Msa1235650 MtrunA17_Chr6g0484441 43.030 165 83 7 10 168 3 162 6.81e-34 130
Msa1235650 MtrunA17_Chr3g0092671 42.169 166 86 4 15 172 8 171 7.12e-34 134
Msa1235650 MtrunA17_Chr7g0263931 40.881 159 81 5 11 159 10 165 1.08e-33 130
Msa1235650 MtrunA17_Chr1g0183741 41.447 152 84 4 12 161 10 158 1.34e-33 128
Msa1235650 MtrunA17_Chr4g0047841 44.366 142 75 3 11 151 14 152 1.35e-33 130
Msa1235650 MtrunA17_Chr4g0056541 41.379 174 92 6 8 174 3 173 1.71e-33 130
Msa1235650 MtrunA17_Chr4g0017921 46.452 155 70 6 12 159 8 156 1.78e-33 130
Msa1235650 MtrunA17_Chr1g0200561 39.535 172 96 5 12 178 19 187 4.03e-33 129
Msa1235650 MtrunA17_Chr8g0385991 42.767 159 75 5 9 156 11 164 6.20e-33 125
Msa1235650 MtrunA17_Chr7g0252971 40.000 170 78 6 11 161 7 171 7.87e-33 128
Msa1235650 MtrunA17_Chr1g0201021 47.097 155 72 6 5 158 13 158 8.00e-33 132
Msa1235650 MtrunA17_Chr7g0217721 52.344 128 55 5 14 140 21 143 8.14e-33 128
Msa1235650 MtrunA17_Chr7g0217711 50.394 127 57 4 14 139 21 142 1.24e-32 122
Msa1235650 MtrunA17_Chr8g0361731 39.521 167 83 5 15 166 17 180 1.55e-32 128
Msa1235650 MtrunA17_Chr2g0309331 33.058 242 139 9 12 239 10 242 3.38e-32 126
Msa1235650 MtrunA17_Chr6g0453451 45.752 153 71 6 12 163 20 161 4.24e-32 125
Msa1235650 MtrunA17_Chr2g0312321 40.237 169 87 5 12 173 11 172 4.80e-32 125
Msa1235650 MtrunA17_Chr7g0261411 41.892 148 81 4 12 157 10 154 5.17e-32 124
Msa1235650 MtrunA17_Chr8g0372121 41.830 153 81 5 12 159 6 155 7.27e-32 124
Msa1235650 MtrunA17_Chr1g0197351 43.949 157 73 4 15 159 45 198 8.12e-32 127
Msa1235650 MtrunA17_Chr4g0076731 43.226 155 80 5 10 160 52 202 1.11e-31 126
Msa1235650 MtrunA17_Chr4g0042561 43.750 160 71 7 12 159 9 161 1.40e-31 122
Msa1235650 MtrunA17_Chr3g0124761 41.139 158 78 5 11 159 6 157 1.43e-31 123
Msa1235650 MtrunA17_Chr5g0417001 38.150 173 89 5 9 166 10 179 1.47e-31 125
Msa1235650 MtrunA17_Chr5g0405211 43.137 153 79 5 12 159 8 157 2.21e-31 124
Msa1235650 MtrunA17_Chr6g0461661 43.846 130 69 3 12 140 18 144 3.55e-31 124
Msa1235650 MtrunA17_Chr7g0214071 39.623 159 86 4 11 165 14 166 5.27e-31 120
Msa1235650 MtrunA17_Chr2g0311661 38.824 170 82 6 10 159 18 185 5.47e-31 121
Msa1235650 MtrunA17_Chr6g0453131 40.719 167 80 6 9 160 12 174 5.73e-31 124
Msa1235650 MtrunA17_Chr7g0253011 46.667 135 65 5 8 139 14 144 6.19e-31 123
Msa1235650 MtrunA17_Chr3g0130731 41.250 160 79 5 12 162 7 160 7.24e-31 121
Msa1235650 MtrunA17_Chr3g0144271 45.736 129 67 2 12 139 23 149 7.44e-31 124
Msa1235650 MtrunA17_Chr2g0311651 39.227 181 88 6 10 170 19 197 7.71e-31 122
Msa1235650 MtrunA17_Chr8g0384721 33.945 218 110 9 12 209 7 210 9.07e-31 120
Msa1235650 MtrunA17_Chr4g0026141 39.521 167 82 5 1 156 1 159 2.47e-30 119
Msa1235650 MtrunA17_Chr2g0321741 44.286 140 72 4 23 161 2 136 5.39e-30 120
Msa1235650 MtrunA17_Chr2g0318081 35.784 204 111 8 12 206 16 208 1.35e-29 119
Msa1235650 MtrunA17_Chr5g0417791 41.139 158 78 7 12 159 3 155 2.46e-29 116
Msa1235650 MtrunA17_Chr8g0346001 38.830 188 93 8 11 182 14 195 6.38e-29 119
Msa1235650 MtrunA17_Chr4g0038751 42.568 148 80 4 15 160 18 162 6.96e-29 116
Msa1235650 MtrunA17_Chr8g0359921 35.321 218 123 9 12 218 14 224 1.21e-28 116
Msa1235650 MtrunA17_Chr5g0442771 31.481 270 146 10 15 252 21 283 3.08e-27 111
Msa1235650 MtrunA17_Chr3g0131911 36.257 171 90 5 9 165 11 176 3.63e-27 109
Msa1235650 MtrunA17_Chr7g0266701 36.310 168 90 6 9 161 1 166 2.79e-26 107
Msa1235650 MtrunA17_Chr2g0321631 37.821 156 84 5 13 156 5 159 1.72e-25 105
Msa1235650 MtrunA17_Chr8g0384351 32.727 165 90 6 12 175 10 154 1.26e-18 84.0
Msa1235650 MtrunA17_Chr4g0050701 27.841 176 100 7 12 173 11 173 2.89e-18 83.2
Msa1235650 MtrunA17_Chr3g0113001 27.586 290 151 12 63 342 13 253 5.00e-17 81.6
Msa1235650 MtrunA17_Chr7g0251651 30.636 173 99 7 12 174 18 179 3.80e-16 77.0
Msa1235650 MtrunA17_Chr3g0130321 30.682 176 97 4 12 171 7 173 2.54e-15 75.1
Msa1235650 MtrunA17_Chr7g0243371 38.095 84 50 2 58 139 6 89 3.51e-14 68.9
Msa1235650 MtrunA17_Chr3g0113031 39.423 104 51 5 78 171 3 104 5.08e-13 69.3
Msa1235650 MtrunA17_Chr7g0251661 30.827 133 78 5 12 139 10 133 7.82e-13 66.6
Msa1235650 MtrunA17_Chr7g0274971 25.481 208 134 8 18 213 11 209 1.11e-11 64.3
Msa1235650 MtrunA17_Chr3g0113011 62.500 48 17 1 13 60 20 66 1.28e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1235650 AT4G01550.1 52.299 174 78 3 14 185 6 176 1.06e-53 188
Msa1235650 AT4G35580.2 51.852 162 69 4 8 163 5 163 4.08e-50 180
Msa1235650 AT4G35580.3 51.852 162 69 4 8 163 5 163 4.31e-50 180
Msa1235650 AT4G35580.1 51.852 162 69 4 8 163 5 163 5.29e-50 179
Msa1235650 AT3G49530.2 51.235 162 67 5 8 161 9 166 1.51e-49 176
Msa1235650 AT3G49530.1 51.235 162 67 5 8 161 9 166 6.19e-49 175
Msa1235650 AT5G24590.2 51.875 160 69 4 8 161 9 166 4.14e-48 173
Msa1235650 AT1G33060.1 53.165 158 65 4 8 159 20 174 1.23e-47 175
Msa1235650 AT1G33060.2 53.165 158 65 4 8 159 20 174 1.33e-47 175
Msa1235650 AT4G01520.1 38.428 229 120 7 13 228 5 225 1.92e-44 159
Msa1235650 AT4G01540.4 38.596 228 119 7 14 228 6 225 7.33e-43 157
Msa1235650 AT4G01540.2 38.596 228 119 7 14 228 6 225 1.04e-42 157
Msa1235650 AT4G01540.3 37.885 227 122 6 14 228 6 225 1.48e-42 157
Msa1235650 AT4G01540.1 38.596 228 119 7 14 228 6 225 2.37e-42 157
Msa1235650 AT4G17980.1 47.468 158 74 3 12 161 6 162 4.61e-41 149
Msa1235650 AT3G10490.1 48.684 152 68 4 15 159 30 178 5.00e-41 148
Msa1235650 AT4G17980.2 47.468 158 74 3 12 161 6 162 1.36e-40 148
Msa1235650 AT3G10480.2 48.344 151 69 4 15 159 30 177 2.83e-40 151
Msa1235650 AT3G10480.1 48.026 152 69 4 15 159 30 178 3.03e-40 151
Msa1235650 AT3G10490.2 48.684 152 68 4 15 159 30 178 4.85e-40 150
Msa1235650 AT5G17260.1 48.387 155 70 4 12 159 6 157 2.13e-39 149
Msa1235650 AT3G17730.1 44.693 179 80 6 12 184 6 171 6.39e-39 142
Msa1235650 AT3G03200.1 45.882 170 80 5 12 172 6 172 8.20e-39 148
Msa1235650 AT5G46590.1 48.125 160 74 5 12 164 6 163 1.18e-37 140
Msa1235650 AT1G02230.1 46.053 152 77 4 13 161 4 153 1.99e-37 141
Msa1235650 AT1G65910.1 48.387 155 71 4 12 160 6 157 2.42e-37 146
Msa1235650 AT5G61430.1 46.497 157 71 7 12 160 16 167 1.97e-36 138
Msa1235650 AT2G27300.1 39.594 197 101 7 1 193 11 193 2.66e-36 138
Msa1235650 AT2G24430.2 45.161 155 77 5 12 161 16 167 3.55e-36 137
Msa1235650 AT2G24430.1 45.161 155 77 5 12 161 16 167 3.55e-36 137
Msa1235650 AT1G32510.1 44.444 171 74 6 12 166 6 171 4.27e-35 133
Msa1235650 AT1G12260.2 43.312 157 81 5 8 159 3 156 5.96e-35 134
Msa1235650 AT1G12260.1 43.312 157 81 5 8 159 3 156 8.34e-35 135
Msa1235650 AT5G46590.2 50.769 130 61 3 12 140 6 133 9.05e-35 132
Msa1235650 AT5G62380.2 36.797 231 124 8 8 228 3 221 1.03e-34 134
Msa1235650 AT5G62380.1 36.797 231 124 8 8 228 3 221 1.03e-34 134
Msa1235650 AT5G39610.1 44.872 156 73 6 12 159 20 170 1.31e-34 132
Msa1235650 AT5G04410.1 43.353 173 84 6 15 177 12 180 1.35e-34 137
Msa1235650 AT5G07680.2 45.570 158 71 7 12 160 3 154 1.61e-34 132
Msa1235650 AT5G07680.1 45.570 158 71 7 12 160 17 168 1.94e-34 132
Msa1235650 AT5G39820.1 48.551 138 67 3 10 146 18 152 2.18e-34 132
Msa1235650 AT3G10480.3 40.541 185 67 6 15 159 30 211 3.19e-34 135
Msa1235650 AT3G15170.1 45.223 157 75 5 12 160 20 173 7.24e-34 130
Msa1235650 AT1G62700.1 39.891 183 99 6 8 185 3 179 8.00e-34 132
Msa1235650 AT1G62700.2 39.891 183 99 6 8 185 3 179 8.00e-34 132
Msa1235650 AT3G10500.1 47.368 152 71 5 15 160 12 160 9.01e-34 134
Msa1235650 AT1G01720.1 42.857 161 76 6 9 159 4 158 1.34e-33 129
Msa1235650 AT3G44290.2 42.593 162 78 6 1 161 11 158 1.61e-33 127
Msa1235650 AT5G53950.1 49.242 132 63 3 10 140 15 143 1.73e-33 131
Msa1235650 AT3G04060.1 42.308 156 78 6 12 159 20 171 2.21e-33 130
Msa1235650 AT1G54330.1 47.020 151 74 4 12 159 6 153 2.27e-33 129
Msa1235650 AT1G33280.1 46.053 152 75 5 12 159 8 156 3.56e-33 128
Msa1235650 AT1G26870.1 42.857 161 74 5 15 160 19 176 4.15e-33 130
Msa1235650 AT1G76420.1 42.038 157 77 5 12 160 22 172 4.44e-33 129
Msa1235650 AT1G71930.2 43.137 153 79 5 12 159 9 158 4.73e-33 128
Msa1235650 AT1G71930.1 43.137 153 79 5 12 159 9 158 4.73e-33 128
Msa1235650 AT3G18400.1 42.593 162 81 6 10 164 3 159 4.82e-33 128
Msa1235650 AT3G29035.1 49.231 130 60 5 12 140 24 148 7.90e-33 127
Msa1235650 AT5G08790.1 41.875 160 76 6 11 159 6 159 7.99e-33 127
Msa1235650 AT1G69490.1 41.772 158 77 6 12 159 9 161 8.84e-33 126
Msa1235650 AT1G56010.2 36.453 203 98 5 12 187 19 217 1.21e-32 127
Msa1235650 AT3G04070.2 35.616 219 113 7 12 214 10 216 1.48e-32 127
Msa1235650 AT1G61110.1 41.520 171 78 6 7 159 11 177 1.66e-32 127
Msa1235650 AT3G44290.1 42.593 162 78 6 1 161 11 158 1.80e-32 127
Msa1235650 AT5G66300.1 42.857 154 79 5 12 159 12 162 1.95e-32 126
Msa1235650 AT3G15510.1 39.583 192 90 7 16 184 21 209 2.01e-32 127
Msa1235650 AT2G18060.3 40.113 177 94 6 12 179 9 182 2.62e-32 127
Msa1235650 AT2G18060.1 40.113 177 94 6 12 179 9 182 2.62e-32 127
Msa1235650 AT1G34190.1 46.753 154 69 5 15 160 19 167 2.94e-32 130
Msa1235650 AT1G79580.3 45.395 152 77 5 12 159 17 166 3.45e-32 127
Msa1235650 AT1G79580.5 45.395 152 77 5 12 159 17 166 3.45e-32 127
Msa1235650 AT1G79580.4 45.395 152 77 5 12 159 17 166 3.45e-32 127
Msa1235650 AT1G79580.2 45.395 152 77 5 12 159 17 166 3.45e-32 127
Msa1235650 AT1G79580.1 45.395 152 77 5 12 159 17 166 3.45e-32 127
Msa1235650 AT5G22290.1 33.333 249 142 9 2 247 19 246 5.26e-32 126
Msa1235650 AT5G09330.5 45.033 151 74 4 15 159 9 156 5.90e-32 129
Msa1235650 AT5G09330.2 45.033 151 74 4 15 159 9 156 5.90e-32 129
Msa1235650 AT5G09330.4 45.033 151 74 4 15 159 9 156 5.90e-32 129
Msa1235650 AT5G09330.3 45.033 151 74 4 15 159 9 156 5.90e-32 129
Msa1235650 AT5G09330.1 45.033 151 74 4 15 159 9 156 5.90e-32 129
Msa1235650 AT3G15500.1 35.780 218 121 9 12 220 14 221 1.10e-31 124
Msa1235650 AT1G34180.3 46.053 152 73 4 15 160 19 167 1.84e-31 126
Msa1235650 AT5G18270.2 41.667 156 79 5 12 159 21 172 1.85e-31 124
Msa1235650 AT2G02450.1 43.624 149 76 5 15 159 54 198 2.26e-31 125
Msa1235650 AT2G02450.2 43.624 149 76 5 15 159 54 198 2.28e-31 125
Msa1235650 AT4G27410.2 35.545 211 109 9 12 210 14 209 2.58e-31 123
Msa1235650 AT4G36160.1 36.449 214 106 9 12 199 10 219 2.76e-31 125
Msa1235650 AT4G36160.3 36.449 214 106 9 12 199 10 219 2.76e-31 125
Msa1235650 AT4G36160.2 36.449 214 106 9 12 199 14 223 2.87e-31 125
Msa1235650 AT2G17040.1 40.741 162 85 5 15 168 9 167 3.53e-31 122
Msa1235650 AT1G34180.1 45.395 152 74 4 15 160 19 167 4.83e-31 127
Msa1235650 AT5G64060.1 42.857 154 73 5 15 159 9 156 6.53e-31 123
Msa1235650 AT4G10350.1 42.604 169 86 6 12 172 9 174 6.86e-31 123
Msa1235650 AT5G18270.1 41.026 156 80 5 12 159 21 172 7.10e-31 122
Msa1235650 AT5G04395.1 42.958 142 67 4 12 140 28 168 1.24e-30 118
Msa1235650 AT1G52890.1 38.462 182 97 6 6 179 8 182 1.93e-30 121
Msa1235650 AT3G04070.1 45.455 132 65 4 12 139 10 138 2.03e-30 122
Msa1235650 AT1G02250.1 42.857 154 83 4 13 163 4 155 2.10e-30 122
Msa1235650 AT5G63790.1 40.000 160 79 6 11 159 49 202 1.32e-29 119
Msa1235650 AT5G63790.2 40.000 160 79 6 11 159 59 212 1.79e-29 118
Msa1235650 AT5G13180.1 38.462 156 85 4 11 161 13 162 3.35e-29 116
Msa1235650 AT3G04420.2 40.588 170 97 4 13 180 4 171 3.63e-29 117
Msa1235650 AT4G27410.3 33.628 226 110 10 12 210 14 226 4.02e-29 117
Msa1235650 AT3G12910.1 34.715 193 103 5 15 187 24 213 4.38e-29 117
Msa1235650 AT3G04420.1 42.384 151 83 4 13 161 4 152 5.63e-29 117
Msa1235650 AT1G01010.1 42.949 156 79 4 14 161 5 158 6.44e-29 119
Msa1235650 AT1G77450.1 38.095 168 89 5 11 169 9 170 8.20e-29 115
Msa1235650 AT2G43000.1 41.176 153 78 6 15 160 21 168 1.07e-28 115
Msa1235650 AT3G61910.1 39.053 169 80 6 11 159 10 175 1.21e-28 116
Msa1235650 AT4G28530.1 37.725 167 85 5 12 161 10 174 1.49e-28 116
Msa1235650 AT5G22380.1 40.506 158 82 5 10 156 3 159 1.89e-28 113
Msa1235650 AT1G34180.4 42.683 164 73 5 15 160 19 179 2.78e-28 117
Msa1235650 AT3G12977.1 36.957 184 96 7 12 184 18 192 2.97e-28 114
Msa1235650 AT1G34180.2 42.073 164 74 5 15 160 19 179 6.27e-28 117
Msa1235650 AT1G02220.1 43.537 147 78 4 12 157 3 145 6.59e-28 115
Msa1235650 AT2G46770.1 38.690 168 80 6 12 159 16 180 7.39e-28 115
Msa1235650 AT2G33480.2 40.000 155 81 5 11 161 14 160 9.65e-28 112
Msa1235650 AT2G33480.1 39.490 157 81 5 11 161 14 162 1.57e-27 112
Msa1235650 AT1G52880.1 35.849 212 111 7 16 211 21 223 3.67e-27 112
Msa1235650 AT1G32770.1 40.476 168 74 8 12 159 16 177 4.99e-27 112
Msa1235650 AT3G44350.2 32.418 182 110 6 10 179 3 183 1.90e-25 105
Msa1235650 AT1G32870.1 44.156 154 73 6 15 160 13 161 1.59e-24 107
Msa1235650 AT1G32870.2 44.156 154 73 6 15 160 13 161 1.67e-24 107
Msa1235650 AT1G32870.3 44.156 154 73 6 15 160 49 197 2.23e-24 107
Msa1235650 AT3G44350.1 36.842 133 80 3 10 139 3 134 1.38e-23 97.4
Msa1235650 AT3G04430.1 37.778 135 68 5 18 140 6 136 2.01e-21 92.8
Msa1235650 AT1G56010.1 34.483 145 66 4 70 187 8 150 3.00e-18 85.1
Msa1235650 AT5G61430.2 41.509 106 52 5 63 160 1 104 3.43e-18 85.1
Msa1235650 AT3G12977.2 37.600 125 63 5 70 184 20 139 1.50e-17 82.4
Msa1235650 AT5G64530.2 35.878 131 66 6 11 139 2 116 1.52e-17 80.5
Msa1235650 AT5G64530.1 35.385 130 66 6 12 139 3 116 1.71e-17 81.3
Msa1235650 AT4G28530.2 41.284 109 47 3 12 105 10 116 6.02e-17 82.4
Msa1235650 AT4G10350.2 38.655 119 64 4 61 172 11 127 9.68e-17 81.3
Msa1235650 AT3G10490.4 46.250 80 34 3 87 159 1 78 2.04e-15 78.2
Msa1235650 AT3G10490.3 46.250 80 34 3 87 159 1 78 2.04e-15 78.2
Msa1235650 AT3G56530.1 32.000 150 94 5 12 156 52 198 4.14e-13 70.9
Msa1235650 AT2G33480.3 36.735 98 54 3 68 159 8 103 1.13e-12 67.8
Msa1235650 AT3G55210.1 30.723 166 97 9 6 156 4 166 2.94e-12 67.8
Msa1235650 AT2G18060.2 39.362 94 47 4 94 179 3 94 8.17e-12 66.2
Msa1235650 AT5G14490.1 28.409 176 102 6 12 169 58 227 7.93e-11 64.3
Msa1235650 AT5G14490.4 28.409 176 102 6 12 169 55 224 8.84e-11 63.9

Find 104 sgRNAs with CRISPR-Local

Find 192 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGATTCCATATTTATTTC+TGG 0.145339 8_2:-13756559 None:intergenic
ATTGATTCCATATTTATTTC+TGG 0.145339 8_2:-13757000 None:intergenic
AGTACCTTTCGAGATGATTT+TGG 0.182200 8_2:+13757754 Msa1235650:CDS
AGGGGTAGCAATAATATTAT+TGG 0.231520 8_2:+13755670 Msa1235650:CDS
CTTAATCTTTCGATCCTTTC+CGG 0.233046 8_2:-13755644 None:intergenic
GCATCGTGAATTGGCGAGTT+TGG 0.245634 8_2:-13756646 None:intergenic
GCATCGTGAATTGGCGAGTT+TGG 0.245634 8_2:-13757087 None:intergenic
AAGTTTAGTTCTAACATATT+AGG 0.259365 8_2:+13758011 Msa1235650:three_prime_UTR
AAATATGGAATCAATATTTC+AGG 0.281347 8_2:+13756567 Msa1235650:CDS
AAATATGGAATCAATATTTC+AGG 0.281347 8_2:+13757008 Msa1235650:CDS
ATAATATCATAGGCTACTTT+TGG 0.286296 8_2:-13755091 None:intergenic
AATGATTATTGACGGGGATT+TGG 0.293193 8_2:+13756744 Msa1235650:CDS
AATGATTATTGACGGGGATT+TGG 0.293193 8_2:+13757185 Msa1235650:CDS
GATGTTGTCATTTCTAAAAT+AGG 0.297612 8_2:-13756668 None:intergenic
GATGTTGTCATTTCTAAAAT+AGG 0.297612 8_2:-13757109 None:intergenic
TACTATAGTGGTCGTGTTCC+TGG 0.304206 8_2:+13755712 Msa1235650:CDS
GACATAGTTCTAATTCCTTT+AGG 0.307549 8_2:+13758083 Msa1235650:three_prime_UTR
AAAACTAAAATTGAGGAATA+AGG 0.314591 8_2:-13758153 None:intergenic
CGGAAAGGATCGAAAGATTA+AGG 0.317340 8_2:+13755645 Msa1235650:CDS
CTTTAGGAACAGTTGTAAAA+TGG 0.324765 8_2:+13758099 Msa1235650:three_prime_UTR
TTTAAAAGGACAACTAATAA+TGG 0.327657 8_2:+13755607 Msa1235650:CDS
GGGGTAGCAATAATATTATT+GGG 0.331309 8_2:+13755671 Msa1235650:CDS
TTCAACTGCAGATATATCTT+TGG 0.332842 8_2:+13757801 Msa1235650:CDS
CGATAGTTACATGCTTAATA+TGG 0.334833 8_2:+13758188 Msa1235650:three_prime_UTR
CTAAAATAGGCATCGTGAAT+TGG 0.340882 8_2:-13756655 None:intergenic
CTAAAATAGGCATCGTGAAT+TGG 0.340882 8_2:-13757096 None:intergenic
CAAAGAGTAAGAGGTTTAAA+AGG 0.342416 8_2:+13755593 Msa1235650:CDS
GTCAAGAGTCGGAGGAAATA+AGG 0.354940 8_2:-13755283 None:intergenic
ACCGCTAAGCTAACACTTCA+TGG 0.360550 8_2:-13758034 None:intergenic
CATCGTGAATTGGCGAGTTT+GGG 0.364030 8_2:-13756645 None:intergenic
CATCGTGAATTGGCGAGTTT+GGG 0.364030 8_2:-13757086 None:intergenic
TCAACGCATGGTAATGTTCC+TGG 0.366029 8_2:+13757679 Msa1235650:CDS
TACTTTGCCAGAAATAAATA+TGG 0.372071 8_2:+13756552 Msa1235650:CDS
TACTTTGCCAGAAATAAATA+TGG 0.372071 8_2:+13756993 Msa1235650:CDS
TCCTCTTCAATGGTTTCAAA+TGG 0.379573 8_2:-13756703 None:intergenic
TCCTCTTCAATGGTTTCAAA+TGG 0.379573 8_2:-13757144 None:intergenic
GGATCGAAAGATTAAGGTTA+GGG 0.381317 8_2:+13755651 Msa1235650:CDS
TTTCTTGAACATCCTAGTTC+AGG 0.382346 8_2:+13757628 Msa1235650:CDS
GATAGAAAACAGGTGCTTCC+AGG 0.383330 8_2:-13757697 None:intergenic
ATAAGTATGCAAAGAGTAAG+AGG 0.388091 8_2:+13755584 Msa1235650:CDS
TTTGCATACTTATAATCAAT+AGG 0.393689 8_2:-13755574 None:intergenic
ATGAATCATTTGATCAAGAT+AGG 0.394555 8_2:-13757981 None:intergenic
TTCCTGGTGTTAACAGCAGC+TGG 0.401870 8_2:+13755728 Msa1235650:CDS
GAACTTATCTTCCTCTTCAA+TGG 0.404183 8_2:-13756713 None:intergenic
GAACTTATCTTCCTCTTCAA+TGG 0.404183 8_2:-13757154 None:intergenic
GAGGTTGATCATAATATCAT+AGG 0.407299 8_2:-13755101 None:intergenic
AAGACTCTTGTTTACTATAG+TGG 0.415807 8_2:+13755700 Msa1235650:CDS
CCAGTCCGAGTCGTTGAAAA+TGG 0.421990 8_2:+13756780 Msa1235650:CDS
CCAGTCCGAGTCGTTGAAAA+TGG 0.421990 8_2:+13757221 Msa1235650:CDS
TGGCTGGTCTTGGATGATAC+TGG 0.422975 8_2:-13757882 None:intergenic
TCATTATTAGTTCAGTTGCT+TGG 0.431816 8_2:-13757953 None:intergenic
AGAGAGATATGAAGAGATAG+TGG 0.436096 8_2:-13755192 None:intergenic
GACATGAAGATGGCTGGTCT+TGG 0.436307 8_2:-13757892 None:intergenic
CGATATTCTTGATACTTCAA+TGG 0.439525 8_2:+13757603 Msa1235650:CDS
AGGATCGAAAGATTAAGGTT+AGG 0.440394 8_2:+13755650 Msa1235650:CDS
TCGTTGAAAATGGTCTACTA+TGG 0.448952 8_2:+13756790 Msa1235650:CDS
TCGTTGAAAATGGTCTACTA+TGG 0.448952 8_2:+13757231 Msa1235650:CDS
CGTATTGTGAATTTCTGATA+AGG 0.449947 8_2:+13758211 Msa1235650:three_prime_UTR
ATTCTTTAAAGATAGAAAAC+AGG 0.461828 8_2:-13757707 None:intergenic
GTCAGTTCAATGATTATTGA+CGG 0.463736 8_2:+13756736 Msa1235650:CDS
GTCAGTTCAATGATTATTGA+CGG 0.463736 8_2:+13757177 Msa1235650:CDS
ACTCTTGACCATGTTCCTGT+TGG 0.471228 8_2:+13755297 Msa1235650:CDS
TTCAATCTCTGAAAATGAGC+AGG 0.480194 8_2:+13756612 Msa1235650:CDS
TTCAATCTCTGAAAATGAGC+AGG 0.480194 8_2:+13757053 Msa1235650:CDS
TCAGTTCAATGATTATTGAC+GGG 0.480425 8_2:+13756737 Msa1235650:CDS
TCAGTTCAATGATTATTGAC+GGG 0.480425 8_2:+13757178 Msa1235650:CDS
TCGAAAAGAGCTGCTTTAAG+AGG 0.483514 8_2:+13757913 Msa1235650:CDS
CTTACAAGCTCTTCATCTGT+TGG 0.488308 8_2:-13755333 None:intergenic
GAAATTATCATTAATTAAAG+TGG 0.491758 8_2:-13758131 None:intergenic
TCGGAACTCATGTGTCTACT+TGG 0.499283 8_2:-13756371 None:intergenic
GGTCTGAATCTGAATCCAAC+AGG 0.502719 8_2:-13755312 None:intergenic
GCCATGAAGTGTTAGCTTAG+CGG 0.516817 8_2:+13758033 Msa1235650:three_prime_UTR
TCCATTTGAAACCATTGAAG+AGG 0.526651 8_2:+13756702 Msa1235650:CDS
TCCATTTGAAACCATTGAAG+AGG 0.526651 8_2:+13757143 Msa1235650:CDS
GATGCATATATATGTGATGA+AGG 0.526843 8_2:+13756344 Msa1235650:CDS
ACAAACCTTGTCATCTTCAA+AGG 0.536374 8_2:-13755776 None:intergenic
GGAATCAATATTTCAGGCAC+AGG 0.539733 8_2:+13756573 Msa1235650:CDS
GGAATCAATATTTCAGGCAC+AGG 0.539733 8_2:+13757014 Msa1235650:CDS
TATGAACCTTGGGAGTTACC+AGG 0.553928 8_2:+13755432 Msa1235650:CDS
TGTATGCAAGTATGAACCTT+GGG 0.557609 8_2:+13755422 Msa1235650:CDS
GTGAATTGGCGAGTTTGGGA+TGG 0.564115 8_2:-13756641 None:intergenic
GTGAATTGGCGAGTTTGGGA+TGG 0.564115 8_2:-13757082 None:intergenic
TAAAATCAGATGACCCAGAA+TGG 0.564520 8_2:+13755539 Msa1235650:CDS
ATTAAGCATGTAACTATCGT+TGG 0.564747 8_2:-13758184 None:intergenic
TGCTGAAGTAGTCTCTATGC+CGG 0.566096 8_2:+13756828 Msa1235650:CDS
AATTAGAACTATGTCTCTTG+AGG 0.567105 8_2:-13758075 None:intergenic
AGCTATAACATTGTCGACAA+TGG 0.576088 8_2:-13755391 None:intergenic
TCCTGGTGTTAACAGCAGCT+GGG 0.577857 8_2:+13755729 Msa1235650:CDS
CAGTTCAATGATTATTGACG+GGG 0.578711 8_2:+13756738 Msa1235650:CDS
CAGTTCAATGATTATTGACG+GGG 0.578711 8_2:+13757179 Msa1235650:CDS
ATCTGCAGTTGAATCACAAG+AGG 0.597794 8_2:-13757791 None:intergenic
ATGCATATATATGTGATGAA+GGG 0.603466 8_2:+13756345 Msa1235650:CDS
TACCACCTTTGAAGATGACA+AGG 0.610149 8_2:+13755771 Msa1235650:CDS
ATCTGAATCCAACAGGAACA+TGG 0.616076 8_2:-13755305 None:intergenic
ACCCAGCTGCTGTTAACACC+AGG 0.624004 8_2:-13755730 None:intergenic
AACCTTGTCATCTTCAAAGG+TGG 0.630537 8_2:-13755773 None:intergenic
ACAGGAACATGGTCAAGAGT+CGG 0.636129 8_2:-13755294 None:intergenic
TGCATATATATGTGATGAAG+GGG 0.640466 8_2:+13756346 Msa1235650:CDS
AAATTGTTGAAATCAACGCA+TGG 0.648209 8_2:+13757667 Msa1235650:CDS
TGCTGAAGTAGTCTCTACGC+CGG 0.650251 8_2:+13757269 Msa1235650:CDS
GCTGCTTTAAGAGGATCTTG+AGG 0.651591 8_2:+13757922 Msa1235650:CDS
ATGTATGCAAGTATGAACCT+TGG 0.657459 8_2:+13755421 Msa1235650:CDS
GGAACATGGTCAAGAGTCGG+AGG 0.664688 8_2:-13755291 None:intergenic
GATCGAAAGATTAAGGTTAG+GGG 0.678144 8_2:+13755652 Msa1235650:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGTTTTGAAATTTGTTT+TGG - chr8_2:13755232-13755251 None:intergenic 15.0%
!!! TTTTATGAGAAAATAATGAT+GGG - chr8_2:13755473-13755492 None:intergenic 15.0%
!!! TTTTTATGAGAAAATAATGA+TGG - chr8_2:13755474-13755493 None:intergenic 15.0%
!! AAAGATGAAAAACATTAAAA+AGG - chr8_2:13755502-13755521 None:intergenic 15.0%
!! ATTTCTATTATCATTTATCA+AGG - chr8_2:13756447-13756466 None:intergenic 15.0%
!!! AGAACTTATATTTGTTTTAT+AGG + chr8_2:13756522-13756541 Msa1235650:intron 15.0%
!! ATTTCTATTATCATTTATCA+AGG - chr8_2:13756447-13756466 None:intergenic 15.0%
!!! AGAACTTATATTTGTTTTAT+AGG + chr8_2:13756522-13756541 Msa1235650:intron 15.0%
!! TTTGAACAATATATATTTAC+CGG - chr8_2:13757291-13757310 None:intergenic 15.0%
!! GAAATTATCATTAATTAAAG+TGG - chr8_2:13758134-13758153 None:intergenic 15.0%
!! AACAAAAACAAAATATAGGA+AGG - chr8_2:13755062-13755081 None:intergenic 20.0%
!! TTTGCATACTTATAATCAAT+AGG - chr8_2:13755577-13755596 None:intergenic 20.0%
!! TTTAAAAGGACAACTAATAA+TGG + chr8_2:13755607-13755626 Msa1235650:CDS 20.0%
!!! ACTATTTTCCTATATATGAT+TGG + chr8_2:13755890-13755909 Msa1235650:intron 20.0%
!! TATGATACCAAAAGAAAAAA+GGG - chr8_2:13755971-13755990 None:intergenic 20.0%
!! ATATGATACCAAAAGAAAAA+AGG - chr8_2:13755972-13755991 None:intergenic 20.0%
!!! TTCAGTTTTTGAATGTTAAT+AGG + chr8_2:13756151-13756170 Msa1235650:intron 20.0%
!!! CAAAAGTTTCTTTATTTTCA+TGG - chr8_2:13756397-13756416 None:intergenic 20.0%
!!! GAAAATAAAGAAACTTTTGA+AGG + chr8_2:13756398-13756417 Msa1235650:CDS 20.0%
!!! ACTTATATTTGTTTTATAGG+TGG + chr8_2:13756525-13756544 Msa1235650:intron 20.0%
!!! CTTATATTTGTTTTATAGGT+GGG + chr8_2:13756526-13756545 Msa1235650:intron 20.0%
!!! ATTGATTCCATATTTATTTC+TGG - chr8_2:13756562-13756581 None:intergenic 20.0%
!! AAATATGGAATCAATATTTC+AGG + chr8_2:13756567-13756586 Msa1235650:CDS 20.0%
!!! ACTTATATTTGTTTTATAGG+TGG + chr8_2:13756525-13756544 Msa1235650:intron 20.0%
!!! CTTATATTTGTTTTATAGGT+GGG + chr8_2:13756526-13756545 Msa1235650:intron 20.0%
!!! ATTGATTCCATATTTATTTC+TGG - chr8_2:13756562-13756581 None:intergenic 20.0%
!! AAATATGGAATCAATATTTC+AGG + chr8_2:13756567-13756586 Msa1235650:CDS 20.0%
!!! ATAAATTGTGAAAAAGTACT+TGG + chr8_2:13757410-13757429 Msa1235650:intron 20.0%
!! AAGAAAATAAGCATTATGAA+AGG - chr8_2:13757564-13757583 None:intergenic 20.0%
!!! ATTCTTTAAAGATAGAAAAC+AGG - chr8_2:13757710-13757729 None:intergenic 20.0%
!!! TGTTTTCTATCTTTAAAGAA+TGG + chr8_2:13757709-13757728 Msa1235650:CDS 20.0%
!!! AAGTTTAGTTCTAACATATT+AGG + chr8_2:13758011-13758030 Msa1235650:three_prime_UTR 20.0%
!! AAAACTAAAATTGAGGAATA+AGG - chr8_2:13758156-13758175 None:intergenic 20.0%
!! ATGTTCAAAAACTAAAATTG+AGG - chr8_2:13758163-13758182 None:intergenic 20.0%
! GCTGAACAAAAACAAAATAT+AGG - chr8_2:13755066-13755085 None:intergenic 25.0%
!!! ATAATATCATAGGCTACTTT+TGG - chr8_2:13755094-13755113 None:intergenic 25.0%
!!! GGGTTTTTTTTTTTTTTACC+TGG - chr8_2:13755453-13755472 None:intergenic 25.0%
!!! GGTTTGTTTTGTTACAATAA+AGG + chr8_2:13755792-13755811 Msa1235650:intron 25.0%
!! TTTGGTATCATATTTGTTAG+AGG + chr8_2:13755979-13755998 Msa1235650:intron 25.0%
! AAAACACAAATCACAAACAA+TGG + chr8_2:13756027-13756046 Msa1235650:intron 25.0%
! ACACTGTCTTTGTAATTAAA+AGG - chr8_2:13756060-13756079 None:intergenic 25.0%
! ATGCATATATATGTGATGAA+GGG + chr8_2:13756345-13756364 Msa1235650:CDS 25.0%
!!! AGTTTCTTTATTTTCATGGT+CGG - chr8_2:13756393-13756412 None:intergenic 25.0%
!! AAATTTTGCGAACAAAGTTT+TGG + chr8_2:13756463-13756482 Msa1235650:intron 25.0%
! TACTTTGCCAGAAATAAATA+TGG + chr8_2:13756552-13756571 Msa1235650:CDS 25.0%
!!! GATGTTGTCATTTCTAAAAT+AGG - chr8_2:13756671-13756690 None:intergenic 25.0%
! CAGGAACAATATATATTTAC+CGG - chr8_2:13756850-13756869 None:intergenic 25.0%
! TATATATTGTTCCTGATGTA+AGG + chr8_2:13756855-13756874 Msa1235650:intron 25.0%
!! AAATTTTGCCAACAAAGTTT+TGG + chr8_2:13756904-13756923 Msa1235650:intron 25.0%
! TACTTTGCCAGAAATAAATA+TGG + chr8_2:13756552-13756571 Msa1235650:CDS 25.0%
!!! GATGTTGTCATTTCTAAAAT+AGG - chr8_2:13756671-13756690 None:intergenic 25.0%
! ATACACACTTTCATATCATT+TGG - chr8_2:13757316-13757335 None:intergenic 25.0%
! ATGAATCATTTGATCAAGAT+AGG - chr8_2:13757984-13758003 None:intergenic 25.0%
! GAGGTTGATCATAATATCAT+AGG - chr8_2:13755104-13755123 None:intergenic 30.0%
!!! GTAACTTGTTTTTGAGATAG+TGG - chr8_2:13755359-13755378 None:intergenic 30.0%
!!! TTCATCTTTTTCAGCTTGTT+CGG + chr8_2:13755513-13755532 Msa1235650:intron 30.0%
ATAAGTATGCAAAGAGTAAG+AGG + chr8_2:13755584-13755603 Msa1235650:CDS 30.0%
CAAAGAGTAAGAGGTTTAAA+AGG + chr8_2:13755593-13755612 Msa1235650:CDS 30.0%
! GGACAACTAATAATGGTTTT+TGG + chr8_2:13755614-13755633 Msa1235650:CDS 30.0%
AGGGGTAGCAATAATATTAT+TGG + chr8_2:13755670-13755689 Msa1235650:CDS 30.0%
GGGGTAGCAATAATATTATT+GGG + chr8_2:13755671-13755690 Msa1235650:CDS 30.0%
! AAGACTCTTGTTTACTATAG+TGG + chr8_2:13755700-13755719 Msa1235650:CDS 30.0%
GACAAAACATGAGTTTATTC+AGG + chr8_2:13755863-13755882 Msa1235650:intron 30.0%
!!! CTTTGAACCCTTTTTTCTTT+TGG + chr8_2:13755961-13755980 Msa1235650:intron 30.0%
AAAAGACTAAAAGAGTGACT+TGG - chr8_2:13756132-13756151 None:intergenic 30.0%
! TATCTTCCGAAATTTTGTAG+CGG + chr8_2:13756264-13756283 Msa1235650:intron 30.0%
AAAAGTCCGCTACAAAATTT+CGG - chr8_2:13756273-13756292 None:intergenic 30.0%
GATGCATATATATGTGATGA+AGG + chr8_2:13756344-13756363 Msa1235650:CDS 30.0%
TGCATATATATGTGATGAAG+GGG + chr8_2:13756346-13756365 Msa1235650:CDS 30.0%
GTCAGTTCAATGATTATTGA+CGG + chr8_2:13756736-13756755 Msa1235650:CDS 30.0%
TCAGTTCAATGATTATTGAC+GGG + chr8_2:13756737-13756756 Msa1235650:CDS 30.0%
!! CTTTAAAGCCAAAACTTTGT+TGG - chr8_2:13756474-13756493 None:intergenic 30.0%
GTCAGTTCAATGATTATTGA+CGG + chr8_2:13756736-13756755 Msa1235650:CDS 30.0%
TCAGTTCAATGATTATTGAC+GGG + chr8_2:13756737-13756756 Msa1235650:CDS 30.0%
TTGGATGAAATGAAATGTCT+AGG + chr8_2:13757429-13757448 Msa1235650:intron 30.0%
CATTCTAGTAGCATTTCAAA+AGG - chr8_2:13757540-13757559 None:intergenic 30.0%
! TCTTCTACAATTTTACAGTG+TGG + chr8_2:13757580-13757599 Msa1235650:intron 30.0%
CGATATTCTTGATACTTCAA+TGG + chr8_2:13757603-13757622 Msa1235650:CDS 30.0%
AAATTGTTGAAATCAACGCA+TGG + chr8_2:13757667-13757686 Msa1235650:CDS 30.0%
TTCAACTGCAGATATATCTT+TGG + chr8_2:13757801-13757820 Msa1235650:CDS 30.0%
! GTTTTTGCGTTTTCTTATAG+TGG - chr8_2:13757863-13757882 None:intergenic 30.0%
TCATTATTAGTTCAGTTGCT+TGG - chr8_2:13757956-13757975 None:intergenic 30.0%
AATTAGAACTATGTCTCTTG+AGG - chr8_2:13758078-13758097 None:intergenic 30.0%
!! GACATAGTTCTAATTCCTTT+AGG + chr8_2:13758083-13758102 Msa1235650:three_prime_UTR 30.0%
! CATTTTACAACTGTTCCTAA+AGG - chr8_2:13758101-13758120 None:intergenic 30.0%
! CTTTAGGAACAGTTGTAAAA+TGG + chr8_2:13758099-13758118 Msa1235650:three_prime_UTR 30.0%
ATTAAGCATGTAACTATCGT+TGG - chr8_2:13758187-13758206 None:intergenic 30.0%
CGATAGTTACATGCTTAATA+TGG + chr8_2:13758188-13758207 Msa1235650:three_prime_UTR 30.0%
CGTATTGTGAATTTCTGATA+AGG + chr8_2:13758211-13758230 Msa1235650:three_prime_UTR 30.0%
AGAGAGATATGAAGAGATAG+TGG - chr8_2:13755195-13755214 None:intergenic 35.0%
AGCTATAACATTGTCGACAA+TGG - chr8_2:13755394-13755413 None:intergenic 35.0%
ATGTATGCAAGTATGAACCT+TGG + chr8_2:13755421-13755440 Msa1235650:CDS 35.0%
TGTATGCAAGTATGAACCTT+GGG + chr8_2:13755422-13755441 Msa1235650:CDS 35.0%
TAAAATCAGATGACCCAGAA+TGG + chr8_2:13755539-13755558 Msa1235650:CDS 35.0%
GACACAAGAAAAACCATTCT+GGG - chr8_2:13755555-13755574 None:intergenic 35.0%
!! AATGGTTTTTGGAAAGCTAC+CGG + chr8_2:13755625-13755644 Msa1235650:CDS 35.0%
CTTAATCTTTCGATCCTTTC+CGG - chr8_2:13755647-13755666 None:intergenic 35.0%
AGGATCGAAAGATTAAGGTT+AGG + chr8_2:13755650-13755669 Msa1235650:CDS 35.0%
GGATCGAAAGATTAAGGTTA+GGG + chr8_2:13755651-13755670 Msa1235650:CDS 35.0%
GATCGAAAGATTAAGGTTAG+GGG + chr8_2:13755652-13755671 Msa1235650:CDS 35.0%
ACAAACCTTGTCATCTTCAA+AGG - chr8_2:13755779-13755798 None:intergenic 35.0%
CAGAACAGCCAATCATATAT+AGG - chr8_2:13755901-13755920 None:intergenic 35.0%
!! ACTAAAAGAGTGACTTGGTA+AGG - chr8_2:13756127-13756146 None:intergenic 35.0%
!!! CGCATTAGTTTGTTTTGTCT+TGG + chr8_2:13756204-13756223 Msa1235650:intron 35.0%
AGCTGAGAAAAAAGCTGAAA+AGG + chr8_2:13756316-13756335 Msa1235650:CDS 35.0%
TTGAAGGAATTCCTGATGTA+AGG + chr8_2:13756414-13756433 Msa1235650:intron 35.0%
TCAGCATGTTTCATGTAGAA+AGG - chr8_2:13756503-13756522 None:intergenic 35.0%
! CATTTTCAGAGATTGAAGGA+AGG - chr8_2:13756609-13756628 None:intergenic 35.0%
! TGCTCATTTTCAGAGATTGA+AGG - chr8_2:13756613-13756632 None:intergenic 35.0%
! TTCAATCTCTGAAAATGAGC+AGG + chr8_2:13756612-13756631 Msa1235650:CDS 35.0%
! CTAAAATAGGCATCGTGAAT+TGG - chr8_2:13756658-13756677 None:intergenic 35.0%
! TCCATTTGAAACCATTGAAG+AGG + chr8_2:13756702-13756721 Msa1235650:CDS 35.0%
TCCTCTTCAATGGTTTCAAA+TGG - chr8_2:13756706-13756725 None:intergenic 35.0%
GAACTTATCTTCCTCTTCAA+TGG - chr8_2:13756716-13756735 None:intergenic 35.0%
CAGTTCAATGATTATTGACG+GGG + chr8_2:13756738-13756757 Msa1235650:CDS 35.0%
AATGATTATTGACGGGGATT+TGG + chr8_2:13756744-13756763 Msa1235650:CDS 35.0%
TCGTTGAAAATGGTCTACTA+TGG + chr8_2:13756790-13756809 Msa1235650:CDS 35.0%
TCAGCATGTTTCATGTAGAA+AGG - chr8_2:13756503-13756522 None:intergenic 35.0%
! CATTTTCAGAGATTGAAGGA+AGG - chr8_2:13756609-13756628 None:intergenic 35.0%
! TGCTCATTTTCAGAGATTGA+AGG - chr8_2:13756613-13756632 None:intergenic 35.0%
! TTCAATCTCTGAAAATGAGC+AGG + chr8_2:13756612-13756631 Msa1235650:CDS 35.0%
! CTAAAATAGGCATCGTGAAT+TGG - chr8_2:13756658-13756677 None:intergenic 35.0%
! TCCATTTGAAACCATTGAAG+AGG + chr8_2:13756702-13756721 Msa1235650:CDS 35.0%
TCCTCTTCAATGGTTTCAAA+TGG - chr8_2:13756706-13756725 None:intergenic 35.0%
GAACTTATCTTCCTCTTCAA+TGG - chr8_2:13756716-13756735 None:intergenic 35.0%
CAGTTCAATGATTATTGACG+GGG + chr8_2:13756738-13756757 Msa1235650:CDS 35.0%
AATGATTATTGACGGGGATT+TGG + chr8_2:13756744-13756763 Msa1235650:CDS 35.0%
TCGTTGAAAATGGTCTACTA+TGG + chr8_2:13756790-13756809 Msa1235650:CDS 35.0%
TATTAGTGAACCATCCATTG+CGG + chr8_2:13757340-13757359 Msa1235650:intron 35.0%
TTTCTTGAACATCCTAGTTC+AGG + chr8_2:13757628-13757647 Msa1235650:CDS 35.0%
! AGTACCTTTCGAGATGATTT+TGG + chr8_2:13757754-13757773 Msa1235650:CDS 35.0%
! GTACCTTTCGAGATGATTTT+GGG + chr8_2:13757755-13757774 Msa1235650:CDS 35.0%
! TACCTTTCGAGATGATTTTG+GGG + chr8_2:13757756-13757775 Msa1235650:CDS 35.0%
!! TTGCGTTTTCTTATAGTGGA+AGG - chr8_2:13757859-13757878 None:intergenic 35.0%
! TAGTGTGTGTGAGAGTTTTG+AGG - chr8_2:13755123-13755142 None:intergenic 40.0%
ATCTGAATCCAACAGGAACA+TGG - chr8_2:13755308-13755327 None:intergenic 40.0%
CTTACAAGCTCTTCATCTGT+TGG - chr8_2:13755336-13755355 None:intergenic 40.0%
! TTTTTACCTGGTAACTCCCA+AGG - chr8_2:13755441-13755460 None:intergenic 40.0%
!!! ATCTTTTTCAGCTTGTTCGG+TGG + chr8_2:13755516-13755535 Msa1235650:intron 40.0%
GGACACAAGAAAAACCATTC+TGG - chr8_2:13755556-13755575 None:intergenic 40.0%
!! TTTTTGGAAAGCTACCGGAA+AGG + chr8_2:13755630-13755649 Msa1235650:CDS 40.0%
CGGAAAGGATCGAAAGATTA+AGG + chr8_2:13755645-13755664 Msa1235650:CDS 40.0%
! TACCACCTTTGAAGATGACA+AGG + chr8_2:13755771-13755790 Msa1235650:CDS 40.0%
AACCTTGTCATCTTCAAAGG+TGG - chr8_2:13755776-13755795 None:intergenic 40.0%
AAGGATGAACTCCTTACATC+AGG - chr8_2:13756428-13756447 None:intergenic 40.0%
GGAATCAATATTTCAGGCAC+AGG + chr8_2:13756573-13756592 Msa1235650:CDS 40.0%
! GTAGACCATTTTCAACGACT+CGG - chr8_2:13756788-13756807 None:intergenic 40.0%
AAGGATGAACTCCTTACATC+AGG - chr8_2:13756428-13756447 None:intergenic 40.0%
GGAATCAATATTTCAGGCAC+AGG + chr8_2:13756573-13756592 Msa1235650:CDS 40.0%
! GTAGACCATTTTCAACGACT+CGG - chr8_2:13756788-13756807 None:intergenic 40.0%
!! GACCACATTTTAGCAATGCT+TGG + chr8_2:13757375-13757394 Msa1235650:intron 40.0%
! CACCAAGCATTGCTAAAATG+TGG - chr8_2:13757380-13757399 None:intergenic 40.0%
! ACCTTTCGAGATGATTTTGG+GGG + chr8_2:13757757-13757776 Msa1235650:CDS 40.0%
!! AGATGATTTTGGGGGATTAG+AGG + chr8_2:13757765-13757784 Msa1235650:CDS 40.0%
ATCTGCAGTTGAATCACAAG+AGG - chr8_2:13757794-13757813 None:intergenic 40.0%
! AGCTCTTTTCGACATGAAGA+TGG - chr8_2:13757905-13757924 None:intergenic 40.0%
! TCGAAAAGAGCTGCTTTAAG+AGG + chr8_2:13757913-13757932 Msa1235650:CDS 40.0%
GTCAAGAGTCGGAGGAAATA+AGG - chr8_2:13755286-13755305 None:intergenic 45.0%
ACAGGAACATGGTCAAGAGT+CGG - chr8_2:13755297-13755316 None:intergenic 45.0%
ACTCTTGACCATGTTCCTGT+TGG + chr8_2:13755297-13755316 Msa1235650:CDS 45.0%
GGTCTGAATCTGAATCCAAC+AGG - chr8_2:13755315-13755334 None:intergenic 45.0%
TATGAACCTTGGGAGTTACC+AGG + chr8_2:13755432-13755451 Msa1235650:CDS 45.0%
TACTATAGTGGTCGTGTTCC+TGG + chr8_2:13755712-13755731 Msa1235650:CDS 45.0%
TCGGAACTCATGTGTCTACT+TGG - chr8_2:13756374-13756393 None:intergenic 45.0%
CATCGTGAATTGGCGAGTTT+GGG - chr8_2:13756648-13756667 None:intergenic 45.0%
TGCTGAAGTAGTCTCTATGC+CGG + chr8_2:13756828-13756847 Msa1235650:CDS 45.0%
CATCGTGAATTGGCGAGTTT+GGG - chr8_2:13756648-13756667 None:intergenic 45.0%
TCAAACTCATGTCACCGCAA+TGG - chr8_2:13757357-13757376 None:intergenic 45.0%
GCATAGTATTCGCCTGAACT+AGG - chr8_2:13757643-13757662 None:intergenic 45.0%
! TCAACGCATGGTAATGTTCC+TGG + chr8_2:13757679-13757698 Msa1235650:CDS 45.0%
GATAGAAAACAGGTGCTTCC+AGG - chr8_2:13757700-13757719 None:intergenic 45.0%
TCCCCCAAAATCATCTCGAA+AGG - chr8_2:13757761-13757780 None:intergenic 45.0%
! CTTTTCGACATGAAGATGGC+TGG - chr8_2:13757901-13757920 None:intergenic 45.0%
!! GCTGCTTTAAGAGGATCTTG+AGG + chr8_2:13757922-13757941 Msa1235650:CDS 45.0%
! GCCATGAAGTGTTAGCTTAG+CGG + chr8_2:13758033-13758052 Msa1235650:three_prime_UTR 45.0%
ACCGCTAAGCTAACACTTCA+TGG - chr8_2:13758037-13758056 None:intergenic 45.0%
! TTCCTGGTGTTAACAGCAGC+TGG + chr8_2:13755728-13755747 Msa1235650:CDS 50.0%
! TCCTGGTGTTAACAGCAGCT+GGG + chr8_2:13755729-13755748 Msa1235650:CDS 50.0%
GTGAATTGGCGAGTTTGGGA+TGG - chr8_2:13756644-13756663 None:intergenic 50.0%
GCATCGTGAATTGGCGAGTT+TGG - chr8_2:13756649-13756668 None:intergenic 50.0%
!! CCATTTTCAACGACTCGGAC+TGG - chr8_2:13756783-13756802 None:intergenic 50.0%
CCAGTCCGAGTCGTTGAAAA+TGG + chr8_2:13756780-13756799 Msa1235650:CDS 50.0%
GTGAATTGGCGAGTTTGGGA+TGG - chr8_2:13756644-13756663 None:intergenic 50.0%
GCATCGTGAATTGGCGAGTT+TGG - chr8_2:13756649-13756668 None:intergenic 50.0%
!! CCATTTTCAACGACTCGGAC+TGG - chr8_2:13756783-13756802 None:intergenic 50.0%
CCAGTCCGAGTCGTTGAAAA+TGG + chr8_2:13756780-13756799 Msa1235650:CDS 50.0%
TGCTGAAGTAGTCTCTACGC+CGG + chr8_2:13757269-13757288 Msa1235650:CDS 50.0%
ACTCATGTCACCGCAATGGA+TGG - chr8_2:13757353-13757372 None:intergenic 50.0%
!! TGGCTGGTCTTGGATGATAC+TGG - chr8_2:13757885-13757904 None:intergenic 50.0%
!! GACATGAAGATGGCTGGTCT+TGG - chr8_2:13757895-13757914 None:intergenic 50.0%
GGAACATGGTCAAGAGTCGG+AGG - chr8_2:13755294-13755313 None:intergenic 55.0%
ACCCAGCTGCTGTTAACACC+AGG - chr8_2:13755733-13755752 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 13755051 13758316 13755051 ID=Msa1235650;Name=Msa1235650
chr8_2 mRNA 13755051 13758316 13755051 ID=Msa1235650-mRNA-1;Parent=Msa1235650;Name=Msa1235650-mRNA-1;_AED=0.24;_eAED=0.24;_QI=225|1|1|1|1|1|6|374|515
chr8_2 exon 13755051 13755453 13755051 ID=Msa1235650-mRNA-1:exon:5297;Parent=Msa1235650-mRNA-1
chr8_2 exon 13755527 13755792 13755527 ID=Msa1235650-mRNA-1:exon:5298;Parent=Msa1235650-mRNA-1
chr8_2 exon 13756284 13756430 13756284 ID=Msa1235650-mRNA-1:exon:5299;Parent=Msa1235650-mRNA-1
chr8_2 exon 13756544 13756849 13756544 ID=Msa1235650-mRNA-1:exon:5300;Parent=Msa1235650-mRNA-1
chr8_2 exon 13756985 13757290 13756985 ID=Msa1235650-mRNA-1:exon:5301;Parent=Msa1235650-mRNA-1
chr8_2 exon 13757598 13758316 13757598 ID=Msa1235650-mRNA-1:exon:5302;Parent=Msa1235650-mRNA-1
chr8_2 five_prime_UTR 13755051 13755275 13755051 ID=Msa1235650-mRNA-1:five_prime_utr;Parent=Msa1235650-mRNA-1
chr8_2 CDS 13755276 13755453 13755276 ID=Msa1235650-mRNA-1:cds;Parent=Msa1235650-mRNA-1
chr8_2 CDS 13755527 13755792 13755527 ID=Msa1235650-mRNA-1:cds;Parent=Msa1235650-mRNA-1
chr8_2 CDS 13756284 13756430 13756284 ID=Msa1235650-mRNA-1:cds;Parent=Msa1235650-mRNA-1
chr8_2 CDS 13756544 13756849 13756544 ID=Msa1235650-mRNA-1:cds;Parent=Msa1235650-mRNA-1
chr8_2 CDS 13756985 13757290 13756985 ID=Msa1235650-mRNA-1:cds;Parent=Msa1235650-mRNA-1
chr8_2 CDS 13757598 13757942 13757598 ID=Msa1235650-mRNA-1:cds;Parent=Msa1235650-mRNA-1
chr8_2 three_prime_UTR 13757943 13758316 13757943 ID=Msa1235650-mRNA-1:three_prime_utr;Parent=Msa1235650-mRNA-1
Gene Sequence

>Msa1235650

ATGACAACCTTATTTCCTCCGACTCTTGACCATGTTCCTGTTGGATTCAGATTCAGACCAACAGATGAAGAGCTTGTAAGCCACTATCTCAAAAACAAGTTACTTGATAACGATTCCATTGTCGACAATGTTATAGCTGAAGTTGATGTATGCAAGTATGAACCTTGGGAGTTACCAGCTTGTTCGGTGGTAAAATCAGATGACCCAGAATGGTTTTTCTTGTGTCCTATTGATTATAAGTATGCAAAGAGTAAGAGGTTTAAAAGGACAACTAATAATGGTTTTTGGAAAGCTACCGGAAAGGATCGAAAGATTAAGGTTAGGGGTAGCAATAATATTATTGGGATTAAGAAGACTCTTGTTTACTATAGTGGTCGTGTTCCTGGTGTTAACAGCAGCTGGGTGATTCATGAATATCATGATACCACCTTTGAAGATGACAAGCGGACTTTTGTTTTATGTCGCTTGATGAAGAAAGCTGAGAAAAAAGCTGAAAAGGAAGCTGATGCATATATATGTGATGAAGGGGAGCCAAGTAGACACATGAGTTCCGACCATGAAAATAAAGAAACTTTTGAAGGAATTCCTGATGTGGGTGATACTTTGCCAGAAATAAATATGGAATCAATATTTCAGGCACAGGCAGAAAAATACCTTCCTTCAATCTCTGAAAATGAGCAGGAAGTATCCATCCCAAACTCGCCAATTCACGATGCCTATTTTAGAAATGACAACATCATTGTTCAGAGTCCATTTGAAACCATTGAAGAGGAAGATAAGTTCGTCAGTTCAATGATTATTGACGGGGATTTGGACAACGCTCATGTCCAGTCCGAGTCGTTGAAAATGGTCTACTATGGAAGCAGTGACACAGATGCTGAAGTAGTCTCTATGCCGGTGGGTGATACTTTGCCAGAAATAAATATGGAATCAATATTTCAGGCACAGGCAGAAAAATACCTTCCTTCAATCTCTGAAAATGAGCAGGAAGTATCCATCCCAAACTCGCCAATTCACGATGCCTATTTTAGAAATGACAACATCATTGTTCAGAGTCCATTTGAAACCATTGAAGAGGAAGATAAGTTCGTCAGTTCAATGATTATTGACGGGGATTTGGACAACGCTCATGTCCAGTCCGAGTCGTTGAAAATGGTCTACTATGGAAGCAGTGACACAGATGCTGAAGTAGTCTCTACGCCGTGTGGCGATATTCTTGATACTTCAATGGCATTTCTTGAACATCCTAGTTCAGGCGAATACTATGCATCAAAATTGTTGAAATCAACGCATGGTAATGTTCCTGGAAGCACCTGTTTTCTATCTTTAAAGAATGGTGAAATCGAAGACAACAACGAGAGTACCTTTCGAGATGATTTTGGGGGATTAGAGGCATCCTCTTGTGATTCAACTGCAGATATATCTTTGGAGACGATCAATTGTATTGAAATTTCTAGTTTACCTTCCACTATAAGAAAACGCAAAAACCAGTATCATCCAAGACCAGCCATCTTCATGTCGAAAAGAGCTGCTTTAAGAGGATCTTGA
Protein sequence

>Msa1235650

MTTLFPPTLDHVPVGFRFRPTDEELVSHYLKNKLLDNDSIVDNVIAEVDVCKYEPWELPACSVVKSDDPEWFFLCPIDYKYAKSKRFKRTTNNGFWKATGKDRKIKVRGSNNIIGIKKTLVYYSGRVPGVNSSWVIHEYHDTTFEDDKRTFVLCRLMKKAEKKAEKEADAYICDEGEPSRHMSSDHENKETFEGIPDVGDTLPEINMESIFQAQAEKYLPSISENEQEVSIPNSPIHDAYFRNDNIIVQSPFETIEEEDKFVSSMIIDGDLDNAHVQSESLKMVYYGSSDTDAEVVSMPVGDTLPEINMESIFQAQAEKYLPSISENEQEVSIPNSPIHDAYFRNDNIIVQSPFETIEEEDKFVSSMIIDGDLDNAHVQSESLKMVYYGSSDTDAEVVSTPCGDILDTSMAFLEHPSSGEYYASKLLKSTHGNVPGSTCFLSLKNGEIEDNNESTFRDDFGGLEASSCDSTADISLETINCIEISSLPSTIRKRKNQYHPRPAIFMSKRAALRGS*