AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1235670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1235670 MtrunA17_Chr8g0345671 67.500 400 37 6 1 307 1 400 5.64e-177 494
Msa1235670 MtrunA17_Chr8g0345691 56.265 407 71 5 6 305 13 419 2.33e-142 407
Msa1235670 MtrunA17_Chr8g0345731 67.133 143 43 2 5 143 24 166 6.75e-66 204
Msa1235670 MtrunA17_Chr8g0345711 64.667 150 45 2 1 142 1 150 3.52e-65 202
Msa1235670 MtrunA17_Chr8g0345721 57.143 175 41 2 1 141 26 200 1.15e-63 200
Msa1235670 MtrunA17_Chr8g0345741 69.841 126 38 0 16 141 2 127 1.56e-61 192
Msa1235670 MtrunA17_Chr8g0345701 55.844 154 50 5 2 141 4 153 2.30e-49 162
Msa1235670 MtrunA17_Chr5g0428991 61.194 134 48 3 3 135 23 153 3.12e-49 173
Msa1235670 MtrunA17_Chr3g0128111 62.016 129 45 4 8 135 45 170 9.73e-49 162
Msa1235670 MtrunA17_Chr3g0128151 60.448 134 49 4 3 135 20 150 1.39e-48 171
Msa1235670 MtrunA17_Chr6g0481091 51.678 149 65 4 4 151 5 147 6.10e-43 147
Msa1235670 MtrunA17_Chr2g0309891 56.154 130 53 3 4 132 5 131 5.64e-42 148
Msa1235670 MtrunA17_Chr5g0433781 57.692 130 51 3 4 132 5 131 2.34e-41 151
Msa1235670 MtrunA17_Chr7g0252971 37.559 213 119 5 5 206 8 217 7.91e-40 142
Msa1235670 MtrunA17_Chr3g0109821 56.923 130 52 3 4 132 5 131 9.92e-40 147
Msa1235670 MtrunA17_Chr5g0400461 52.941 136 57 3 4 133 5 139 1.26e-39 141
Msa1235670 MtrunA17_Chr1g0197361 56.349 126 52 2 8 132 11 134 4.54e-39 144
Msa1235670 MtrunA17_Chr4g0054791 52.985 134 60 3 4 135 5 137 6.27e-39 139
Msa1235670 MtrunA17_Chr2g0318101 50.769 130 60 3 4 132 14 140 1.53e-38 139
Msa1235670 MtrunA17_Chr4g0047841 46.452 155 78 4 5 158 15 165 9.76e-38 137
Msa1235670 MtrunA17_Chr8g0364791 44.667 150 75 5 8 156 9 151 1.86e-37 138
Msa1235670 MtrunA17_Chr8g0361731 46.207 145 74 3 8 151 17 158 2.98e-37 136
Msa1235670 MtrunA17_Chr2g0326361 39.362 188 107 4 4 187 13 197 6.09e-37 134
Msa1235670 MtrunA17_Chr8g0385991 44.156 154 79 4 5 156 14 162 9.55e-37 131
Msa1235670 MtrunA17_Chr3g0130731 51.852 135 58 4 5 138 7 135 2.47e-36 132
Msa1235670 MtrunA17_Chr7g0217721 55.814 129 51 5 5 132 19 142 2.69e-36 133
Msa1235670 MtrunA17_Chr2g0316971 53.488 129 56 3 5 132 23 148 3.73e-36 133
Msa1235670 MtrunA17_Chr7g0217711 55.039 129 52 5 5 132 19 142 4.35e-36 128
Msa1235670 MtrunA17_Chr8g0384721 44.444 153 78 4 5 156 7 153 4.48e-36 131
Msa1235670 MtrunA17_Chr3g0091921 55.039 129 52 5 5 132 16 139 5.53e-36 131
Msa1235670 MtrunA17_Chr3g0130101 50.794 126 58 3 8 132 10 132 6.21e-36 132
Msa1235670 MtrunA17_Chr4g0060931 54.135 133 47 6 5 132 17 140 7.08e-36 132
Msa1235670 MtrunA17_Chr6g0484441 51.128 133 59 4 1 132 1 128 1.79e-35 130
Msa1235670 MtrunA17_Chr7g0214071 48.175 137 64 3 5 140 15 145 1.99e-35 128
Msa1235670 MtrunA17_Chr3g0124761 45.752 153 75 5 5 156 7 152 2.21e-35 129
Msa1235670 MtrunA17_Chr4g0042561 40.323 186 85 5 2 186 6 166 4.26e-35 128
Msa1235670 MtrunA17_Chr6g0453131 46.207 145 73 4 8 151 18 158 1.21e-34 129
Msa1235670 MtrunA17_Chr1g0147421 49.231 130 63 2 4 132 26 153 1.36e-34 129
Msa1235670 MtrunA17_Chr7g0253011 50.000 134 61 4 2 132 14 144 1.65e-34 129
Msa1235670 MtrunA17_Chr3g0092671 53.968 126 55 2 8 132 8 131 1.72e-34 131
Msa1235670 MtrunA17_Chr5g0398971 49.630 135 60 5 6 136 8 138 2.97e-34 127
Msa1235670 MtrunA17_Chr3g0139331 50.000 142 64 5 4 141 10 148 3.28e-34 127
Msa1235670 MtrunA17_Chr6g0461661 48.837 129 62 3 5 132 18 143 3.71e-34 128
Msa1235670 MtrunA17_Chr8g0384201 42.667 150 78 5 8 156 9 151 3.84e-34 130
Msa1235670 MtrunA17_Chr1g0201021 51.880 133 59 4 1 132 16 144 4.29e-34 130
Msa1235670 MtrunA17_Chr7g0263931 46.512 129 65 3 5 132 11 136 4.49e-34 127
Msa1235670 MtrunA17_Chr1g0183741 47.761 134 66 3 4 136 9 139 4.58e-34 125
Msa1235670 MtrunA17_Chr2g0318081 50.769 130 58 4 4 132 15 139 6.21e-34 127
Msa1235670 MtrunA17_Chr6g0453451 51.938 129 56 4 5 132 20 143 6.99e-34 126
Msa1235670 MtrunA17_Chr1g0197351 53.077 130 57 3 4 132 41 167 8.62e-34 129
Msa1235670 MtrunA17_Chr7g0261411 47.015 134 67 3 4 136 9 139 9.88e-34 125
Msa1235670 MtrunA17_Chr8g0359921 45.513 156 73 6 4 156 13 159 1.70e-33 125
Msa1235670 MtrunA17_Chr5g0417001 44.056 143 76 3 8 149 17 156 1.92e-33 126
Msa1235670 MtrunA17_Chr4g0018391 48.872 133 63 4 6 136 8 137 2.38e-33 125
Msa1235670 MtrunA17_Chr3g0144271 48.529 136 65 3 5 137 23 156 2.96e-33 126
Msa1235670 MtrunA17_Chr2g0311661 49.219 128 60 4 8 132 24 149 5.16e-33 123
Msa1235670 MtrunA17_Chr2g0311651 48.438 128 61 4 8 132 25 150 8.82e-33 123
Msa1235670 MtrunA17_Chr2g0312321 48.837 129 58 4 5 132 11 132 1.31e-32 122
Msa1235670 MtrunA17_Chr8g0372121 43.972 141 74 4 1 139 2 139 1.79e-32 122
Msa1235670 MtrunA17_Chr4g0076731 48.413 126 60 4 8 132 57 178 3.53e-32 124
Msa1235670 MtrunA17_Chr5g0417791 49.612 129 59 5 5 132 3 126 3.68e-32 120
Msa1235670 MtrunA17_Chr1g0200561 41.139 158 82 5 1 156 15 163 3.68e-32 122
Msa1235670 MtrunA17_Chr5g0405211 47.015 134 66 4 1 132 4 134 5.96e-32 121
Msa1235670 MtrunA17_Chr4g0017921 49.612 129 60 4 6 132 9 134 1.24e-31 120
Msa1235670 MtrunA17_Chr4g0056541 47.287 129 63 4 6 132 8 133 1.43e-31 120
Msa1235670 MtrunA17_Chr4g0026141 45.255 137 71 3 1 134 1 136 2.12e-31 118
Msa1235670 MtrunA17_Chr2g0309331 45.455 143 71 5 4 144 9 146 2.28e-31 120
Msa1235670 MtrunA17_Chr2g0321741 54.630 108 44 4 26 132 13 116 3.09e-31 119
Msa1235670 MtrunA17_Chr5g0442771 47.244 127 62 4 8 132 21 144 6.28e-30 115
Msa1235670 MtrunA17_Chr3g0131911 39.490 157 85 5 5 156 14 165 6.62e-30 113
Msa1235670 MtrunA17_Chr4g0038751 47.244 127 62 4 8 132 18 141 8.52e-30 114
Msa1235670 MtrunA17_Chr8g0346001 45.652 138 67 5 5 140 15 146 1.73e-29 116
Msa1235670 MtrunA17_Chr2g0321631 44.203 138 72 4 6 139 5 141 1.29e-28 110
Msa1235670 MtrunA17_Chr7g0266701 36.242 149 90 4 3 147 2 149 1.15e-23 97.4
Msa1235670 MtrunA17_Chr3g0113001 53.846 78 33 3 56 132 13 88 1.61e-19 86.7
Msa1235670 MtrunA17_Chr4g0050701 34.091 132 69 5 5 132 11 128 9.20e-18 79.7
Msa1235670 MtrunA17_Chr3g0130321 33.951 162 91 6 2 156 4 156 9.65e-17 77.4
Msa1235670 MtrunA17_Chr7g0243371 40.476 84 48 2 51 132 6 89 1.84e-15 71.6
Msa1235670 MtrunA17_Chr8g0384351 35.036 137 68 6 5 140 10 126 1.59e-14 70.9
Msa1235670 MtrunA17_Chr7g0251651 33.333 129 80 4 5 132 18 141 2.35e-14 70.5
Msa1235670 MtrunA17_Chr3g0113011 63.265 49 17 1 5 53 19 66 9.67e-13 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1235670 AT4G35580.3 62.500 136 47 3 4 138 8 140 2.27e-53 182
Msa1235670 AT4G35580.1 62.500 136 47 3 4 138 8 140 2.51e-53 182
Msa1235670 AT4G35580.2 62.500 136 47 3 4 138 8 140 2.52e-53 182
Msa1235670 AT1G33060.1 59.398 133 50 3 4 135 23 152 7.28e-50 175
Msa1235670 AT1G33060.2 59.398 133 50 3 4 135 23 152 7.55e-50 175
Msa1235670 AT3G49530.2 56.204 137 57 3 3 138 11 145 7.42e-49 168
Msa1235670 AT3G49530.1 56.204 137 57 3 3 138 11 145 2.76e-48 168
Msa1235670 AT5G24590.2 56.618 136 56 3 4 138 12 145 1.04e-47 166
Msa1235670 AT4G01550.1 54.348 138 61 2 7 142 6 143 6.17e-46 161
Msa1235670 AT5G17260.1 59.231 130 49 3 4 132 5 131 5.42e-44 156
Msa1235670 AT4G17980.1 50.000 142 69 2 2 142 3 143 2.66e-43 149
Msa1235670 AT3G03200.1 58.462 130 50 3 4 132 5 131 9.43e-43 153
Msa1235670 AT4G17980.2 50.000 142 69 2 2 142 3 143 1.07e-42 149
Msa1235670 AT3G17730.1 56.489 131 53 3 4 133 5 132 1.43e-42 147
Msa1235670 AT1G65910.1 58.462 130 50 3 4 132 5 131 3.22e-41 151
Msa1235670 AT5G46590.2 49.315 146 71 3 5 149 6 149 5.68e-40 141
Msa1235670 AT5G46590.1 50.355 141 67 3 5 144 6 144 1.51e-39 140
Msa1235670 AT5G39610.1 56.589 129 50 5 5 132 20 143 2.38e-39 140
Msa1235670 AT3G10480.1 50.735 136 63 3 4 138 26 158 3.05e-39 143
Msa1235670 AT3G10480.2 50.735 136 63 3 4 138 26 158 3.33e-39 143
Msa1235670 AT3G10490.1 48.921 139 67 3 1 138 23 158 5.69e-39 137
Msa1235670 AT4G01520.1 46.429 140 72 3 6 142 5 144 8.49e-39 139
Msa1235670 AT1G01720.1 45.752 153 76 4 5 156 7 153 1.83e-38 137
Msa1235670 AT5G09330.5 48.667 150 69 5 8 156 9 151 2.75e-38 141
Msa1235670 AT5G09330.2 48.667 150 69 5 8 156 9 151 2.75e-38 141
Msa1235670 AT5G09330.4 48.667 150 69 5 8 156 9 151 2.75e-38 141
Msa1235670 AT5G09330.3 48.667 150 69 5 8 156 9 151 2.75e-38 141
Msa1235670 AT5G09330.1 48.667 150 69 5 8 156 9 151 2.75e-38 141
Msa1235670 AT3G10490.2 48.921 139 67 3 1 138 23 158 3.17e-38 140
Msa1235670 AT3G29035.1 53.731 134 46 6 5 132 24 147 5.12e-38 137
Msa1235670 AT5G08790.1 45.752 153 76 4 5 156 7 153 1.14e-37 135
Msa1235670 AT1G02230.1 46.405 153 71 4 6 149 4 154 1.63e-37 137
Msa1235670 AT4G01540.4 46.763 139 71 3 7 142 6 144 2.06e-37 137
Msa1235670 AT4G01540.2 46.763 139 71 3 7 142 6 144 2.06e-37 138
Msa1235670 AT3G04070.2 51.128 133 58 4 4 132 9 138 2.27e-37 136
Msa1235670 AT5G61430.1 54.264 129 53 5 5 132 16 139 2.61e-37 135
Msa1235670 AT1G54330.1 54.887 133 56 3 4 135 5 134 3.35e-37 134
Msa1235670 AT3G04070.1 51.128 133 58 4 4 132 9 138 3.95e-37 136
Msa1235670 AT4G01540.1 46.763 139 71 3 7 142 6 144 3.99e-37 138
Msa1235670 AT4G01540.3 46.763 139 71 3 7 142 6 144 5.00e-37 137
Msa1235670 AT5G39820.1 47.445 137 68 3 8 143 23 156 5.78e-37 135
Msa1235670 AT3G04060.1 53.488 129 55 4 5 132 20 144 7.12e-37 135
Msa1235670 AT3G44290.2 51.128 133 59 5 1 132 11 138 1.69e-36 130
Msa1235670 AT5G53950.1 54.264 129 55 3 5 132 17 142 2.26e-36 134
Msa1235670 AT5G64060.1 47.682 151 71 5 2 151 4 147 3.33e-36 133
Msa1235670 AT5G07680.2 52.713 129 55 5 5 132 3 126 9.22e-36 131
Msa1235670 AT5G07680.1 52.713 129 55 5 5 132 17 140 1.04e-35 131
Msa1235670 AT1G26870.1 50.794 126 58 3 8 132 19 141 1.41e-35 133
Msa1235670 AT3G18400.1 50.376 133 60 4 1 132 1 128 1.54e-35 130
Msa1235670 AT2G27300.1 51.163 129 57 5 5 132 15 138 1.73e-35 131
Msa1235670 AT1G32510.1 45.399 163 78 5 1 156 1 159 1.77e-35 129
Msa1235670 AT5G66300.1 50.376 133 61 4 4 134 11 140 1.99e-35 130
Msa1235670 AT3G15510.1 52.000 125 56 3 9 132 21 142 2.09e-35 131
Msa1235670 AT3G44290.1 51.128 133 59 5 1 132 11 138 3.26e-35 130
Msa1235670 AT1G12260.2 48.201 139 64 5 3 136 2 137 3.53e-35 130
Msa1235670 AT3G15500.1 50.769 130 58 4 4 132 13 137 4.92e-35 129
Msa1235670 AT1G71930.2 44.304 158 77 5 1 156 5 153 5.94e-35 129
Msa1235670 AT1G71930.1 44.304 158 77 5 1 156 5 153 5.94e-35 129
Msa1235670 AT5G04410.1 53.030 132 58 3 2 132 6 134 8.82e-35 133
Msa1235670 AT3G15170.1 52.344 128 57 3 6 132 21 145 9.11e-35 128
Msa1235670 AT1G62700.1 41.624 197 97 7 3 184 2 195 1.06e-34 130
Msa1235670 AT1G62700.2 41.624 197 97 7 3 184 2 195 1.06e-34 130
Msa1235670 AT1G12260.1 48.201 139 64 5 3 136 2 137 1.08e-34 130
Msa1235670 AT1G69490.1 46.897 145 68 6 3 146 7 143 1.26e-34 127
Msa1235670 AT5G18270.2 51.938 129 57 4 5 132 21 145 1.40e-34 129
Msa1235670 AT5G22290.1 48.551 138 63 6 5 139 22 154 1.55e-34 129
Msa1235670 AT3G10500.1 47.436 156 74 5 2 156 6 154 2.04e-34 132
Msa1235670 AT1G76420.1 47.692 130 64 3 4 132 21 147 2.63e-34 128
Msa1235670 AT1G34190.1 49.306 144 66 4 8 150 19 156 2.68e-34 131
Msa1235670 AT1G61110.1 47.333 150 68 6 5 151 16 157 2.88e-34 127
Msa1235670 AT4G27410.2 49.231 130 60 4 4 132 13 137 2.91e-34 127
Msa1235670 AT5G04395.1 43.046 151 72 4 3 140 26 175 3.70e-34 123
Msa1235670 AT5G18270.1 51.163 129 58 4 5 132 21 145 4.06e-34 127
Msa1235670 AT3G12910.1 48.148 135 64 4 8 139 24 155 4.18e-34 126
Msa1235670 AT2G24430.2 49.231 130 62 3 4 132 15 141 5.39e-34 126
Msa1235670 AT2G24430.1 49.231 130 62 3 4 132 15 141 5.39e-34 126
Msa1235670 AT1G52890.1 50.769 130 58 4 4 132 13 137 6.17e-34 126
Msa1235670 AT5G63790.1 43.506 154 80 4 4 156 49 196 6.99e-34 126
Msa1235670 AT5G63790.2 43.506 154 80 4 4 156 59 206 7.91e-34 126
Msa1235670 AT1G77450.1 43.791 153 78 5 5 156 10 155 1.22e-33 124
Msa1235670 AT1G34180.3 52.381 126 56 3 8 132 19 141 1.64e-33 128
Msa1235670 AT2G17040.1 50.000 128 59 4 8 133 9 133 1.91e-33 124
Msa1235670 AT1G34180.1 48.611 144 67 4 8 150 19 156 3.80e-33 128
Msa1235670 AT5G13180.1 46.154 130 63 3 5 133 14 137 7.52e-33 122
Msa1235670 AT2G33480.1 50.000 130 56 4 5 133 15 136 1.11e-32 122
Msa1235670 AT2G33480.2 50.000 130 56 4 5 133 15 136 1.16e-32 122
Msa1235670 AT2G02450.1 47.518 141 65 6 8 144 54 189 2.15e-32 124
Msa1235670 AT3G10480.3 41.420 169 62 5 4 138 26 191 2.60e-32 125
Msa1235670 AT4G10350.1 47.826 138 67 4 6 141 10 144 3.21e-32 122
Msa1235670 AT2G02450.2 47.518 141 65 6 8 144 54 189 3.60e-32 124
Msa1235670 AT1G02250.1 45.652 138 71 3 6 141 4 139 3.72e-32 122
Msa1235670 AT2G43000.1 47.183 142 65 6 8 144 21 157 3.89e-32 120
Msa1235670 AT4G27410.3 44.828 145 61 5 4 132 13 154 1.83e-31 120
Msa1235670 AT2G18060.3 47.328 131 64 4 4 132 8 135 1.95e-31 120
Msa1235670 AT2G18060.1 47.328 131 64 4 4 132 8 135 1.95e-31 120
Msa1235670 AT5G62380.2 46.923 130 64 4 5 132 7 133 3.25e-31 120
Msa1235670 AT5G62380.1 46.923 130 64 4 5 132 7 133 3.25e-31 120
Msa1235670 AT1G33280.1 46.715 137 68 4 6 140 9 142 3.98e-31 119
Msa1235670 AT4G36160.1 46.565 131 65 4 4 132 9 136 5.00e-31 120
Msa1235670 AT4G36160.3 46.565 131 65 4 4 132 9 136 5.00e-31 120
Msa1235670 AT4G36160.2 46.565 131 65 4 4 132 13 140 5.16e-31 120
Msa1235670 AT1G56010.2 45.736 129 65 3 5 132 19 143 6.46e-31 118
Msa1235670 AT1G34180.4 47.826 138 56 4 8 132 19 153 3.80e-30 119
Msa1235670 AT1G34180.2 44.872 156 67 5 8 150 19 168 5.45e-30 119
Msa1235670 AT2G46770.1 45.652 138 67 5 5 140 16 147 6.62e-30 117
Msa1235670 AT1G79580.3 47.328 131 65 4 4 132 16 144 1.25e-29 116
Msa1235670 AT1G79580.5 47.328 131 65 4 4 132 16 144 1.25e-29 116
Msa1235670 AT1G79580.4 47.328 131 65 4 4 132 16 144 1.25e-29 116
Msa1235670 AT1G79580.2 47.328 131 65 4 4 132 16 144 1.25e-29 116
Msa1235670 AT1G79580.1 47.328 131 65 4 4 132 16 144 1.25e-29 116
Msa1235670 AT3G61910.1 39.873 158 87 5 5 160 11 162 1.35e-29 115
Msa1235670 AT4G28530.1 42.953 149 57 4 5 132 10 151 3.35e-29 114
Msa1235670 AT1G52880.1 50.758 132 55 5 9 135 21 147 1.69e-28 112
Msa1235670 AT1G32770.1 46.970 132 61 5 5 132 16 142 4.40e-28 111
Msa1235670 AT3G12977.1 43.182 132 65 5 4 132 17 141 1.03e-27 109
Msa1235670 AT5G22380.1 41.727 139 76 4 1 135 1 138 1.48e-27 107
Msa1235670 AT1G02220.1 45.255 137 68 4 6 141 4 134 1.32e-26 108
Msa1235670 AT3G04420.1 44.275 131 69 4 6 134 4 132 4.66e-26 105
Msa1235670 AT3G04420.2 44.275 131 69 4 6 134 4 132 5.92e-26 104
Msa1235670 AT1G32870.1 50.794 126 56 4 8 132 13 133 6.41e-26 107
Msa1235670 AT1G32870.2 50.794 126 56 4 8 132 13 133 6.73e-26 107
Msa1235670 AT3G44350.1 39.855 138 79 3 1 135 1 137 7.65e-26 100
Msa1235670 AT1G32870.3 50.794 126 56 4 8 132 49 169 9.05e-26 107
Msa1235670 AT3G44350.2 39.855 138 79 3 1 135 1 137 1.40e-25 102
Msa1235670 AT1G01010.1 42.069 145 74 4 7 143 5 147 2.03e-25 105
Msa1235670 AT5G61430.2 56.410 78 31 3 56 132 1 76 1.28e-20 89.7
Msa1235670 AT3G04430.1 40.441 136 65 5 11 134 6 137 3.04e-20 87.0
Msa1235670 AT4G28530.2 43.860 114 37 3 5 98 10 116 8.19e-19 85.5
Msa1235670 AT5G64530.2 34.351 131 66 5 5 132 3 116 1.17e-17 79.0
Msa1235670 AT5G64530.1 34.091 132 67 5 4 132 2 116 1.75e-17 79.3
Msa1235670 AT4G10350.2 46.067 89 45 2 54 141 11 97 4.27e-17 80.5
Msa1235670 AT3G12977.2 50.704 71 32 2 63 132 20 88 5.03e-17 79.0
Msa1235670 AT1G56010.1 52.113 71 31 2 63 132 8 76 7.52e-17 79.0
Msa1235670 AT3G56530.1 35.897 156 87 7 4 156 51 196 1.45e-16 79.3
Msa1235670 AT2G33480.3 52.055 73 32 2 61 132 8 78 3.04e-16 76.6
Msa1235670 AT4G29230.2 29.268 164 87 8 5 144 47 205 4.16e-12 67.0
Msa1235670 AT4G29230.1 29.268 164 87 8 5 144 48 206 4.17e-12 67.0
Msa1235670 AT4G29230.3 29.268 164 87 8 5 144 48 206 5.51e-12 66.6
Msa1235670 AT3G55210.1 33.775 151 81 8 5 139 11 158 8.36e-12 65.1
Msa1235670 AT5G14490.4 30.667 150 80 6 5 136 55 198 3.87e-11 63.5
Msa1235670 AT5G14490.1 30.667 150 80 6 5 136 58 201 4.18e-11 63.5
Msa1235670 AT5G14490.2 30.667 150 80 6 5 136 55 198 6.53e-11 62.4
Msa1235670 AT5G14490.3 30.667 150 80 6 5 136 58 201 6.91e-11 62.8

Find 55 sgRNAs with CRISPR-Local

Find 204 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCATTTCGAGATGATTTC+GGG 0.227385 8_2:+13769713 Msa1235670:CDS
ACAAATACGCAAATAGTAAA+AGG 0.269504 8_2:+13768710 Msa1235670:CDS
GCATCATTTCGAGATGATTT+CGG 0.275502 8_2:+13769712 Msa1235670:CDS
AGAGGTACAAACAATGTTAT+TGG 0.278639 8_2:+13768796 Msa1235670:CDS
TGGTCTTGACCGTAAGATTA+AGG 0.284539 8_2:+13768771 Msa1235670:CDS
CTCCTGGTGTTAAAAGCAAC+TGG 0.345111 8_2:+13768854 Msa1235670:CDS
TACTATAATGGTTGTGCTCC+TGG 0.345726 8_2:+13768838 Msa1235670:CDS
TTTCTTGAACATCCTAGTTC+AGG 0.346685 8_2:+13769679 Msa1235670:CDS
GTTCGAACCTTGGGACTTAC+CGG 0.351183 8_2:+13768554 Msa1235670:CDS
GAGGTACAAACAATGTTATT+GGG 0.353644 8_2:+13768797 Msa1235670:CDS
AAAACACTTGTGTACTATAA+TGG 0.357000 8_2:+13768826 Msa1235670:CDS
GACATGAAGGTGGCTGGTCT+TGG 0.374690 8_2:-13769850 None:intergenic
TGGCTGGTCTTGGATGATAC+TGG 0.427061 8_2:-13769840 None:intergenic
GAAGGACAGAGTGTGGATAC+TGG 0.428296 8_2:+13768740 Msa1235670:CDS
TACCTCTAACCTTAATCTTA+CGG 0.431946 8_2:-13768780 None:intergenic
TCGTTGAGAATGATCTACTA+TGG 0.438845 8_2:+13769513 Msa1235670:CDS
TGTTTGCAAGTTCGAACCTT+GGG 0.438935 8_2:+13768545 Msa1235670:CDS
GACCGTAAGATTAAGGTTAG+AGG 0.442904 8_2:+13768778 Msa1235670:CDS
CAAGCTCTTCATCTGTTGGT+TGG 0.449162 8_2:-13768452 None:intergenic
TTGTTTCTTCTTAGAGTGGA+AGG 0.456022 8_2:-13769814 None:intergenic
AATGTTTCAGGAACCTCATC+AGG 0.458637 8_2:+13769253 Msa1235670:intron
TCGGAACTCATGTGTTTACT+TGG 0.464802 8_2:-13769095 None:intergenic
TTTACAAGCTCTTCATCTGT+TGG 0.472698 8_2:-13768456 None:intergenic
GAAAATCAAGAAGCAGTTGA+AGG 0.489171 8_2:+13769122 Msa1235670:CDS
GGTTGGAATCTGAATCCAAC+AGG 0.493475 8_2:-13768435 None:intergenic
TTCAATCTCTGAAAATGAGA+TGG 0.499943 8_2:+13769310 Msa1235670:CDS
ATGACAAACTCATTTCCTGT+TGG 0.502565 8_2:+13768420 Msa1235670:CDS
GCATAGTATTCTCCTGAACT+AGG 0.503449 8_2:-13769691 None:intergenic
GAAGACTGGTATGTTGAGAA+AGG 0.511939 8_2:-13769290 None:intergenic
AGCTATAAAATTGTTGACAA+TGG 0.512549 8_2:-13768514 None:intergenic
GATAGAATGATATGTGATGA+AGG 0.532647 8_2:+13769068 Msa1235670:CDS
TAGAATGATATGTGATGAAG+GGG 0.540119 8_2:+13769070 Msa1235670:CDS
ACACAATTGATCATCTCCCT+AGG 0.542532 8_2:-13769775 None:intergenic
TTCGAACCTTGGGACTTACC+GGG 0.549304 8_2:+13768555 Msa1235670:CDS
TAAAATCCAATGATCCAGAA+TGG 0.550077 8_2:+13768665 Msa1235670:CDS
ATAGAATGATATGTGATGAA+GGG 0.555622 8_2:+13769069 Msa1235670:CDS
ACAAACCTGGTTATCATCAA+AGG 0.564326 8_2:-13768902 None:intergenic
TACCACCTTTGATGATAACC+AGG 0.567592 8_2:+13768897 Msa1235670:CDS
ATGTTTGCAAGTTCGAACCT+TGG 0.568862 8_2:+13768544 Msa1235670:CDS
ATAGTAAAAGGTTTAACAGA+AGG 0.579914 8_2:+13768722 Msa1235670:CDS
TGTGGATACTGGAAAGCCAC+TGG 0.585586 8_2:+13768751 Msa1235670:CDS
ACTCGACTGCAGATAAACCT+AGG 0.586479 8_2:+13769758 Msa1235670:CDS
ATCTGCAGTCGAGTCACAAG+AGG 0.603959 8_2:-13769749 None:intergenic
TCCTGGTGTTAAAAGCAACT+GGG 0.605841 8_2:+13768855 Msa1235670:CDS
TTTAACAGAAGGACAGAGTG+TGG 0.612656 8_2:+13768733 Msa1235670:CDS
CTACTAGAATGGAACTTCAA+CGG 0.619240 8_2:+13769654 Msa1235670:intron
CTCGACTGCAGATAAACCTA+GGG 0.625064 8_2:+13769759 Msa1235670:CDS
AATCTTACGGTCAAGACCAG+TGG 0.626820 8_2:-13768767 None:intergenic
ATCATTTCGAGATGATTTCG+GGG 0.650121 8_2:+13769714 Msa1235670:CDS
TTTGCGTATTTGTAATCGCG+AGG 0.654879 8_2:-13768700 None:intergenic
AACCTGGTTATCATCAAAGG+TGG 0.663139 8_2:-13768899 None:intergenic
GAATGATATGTGATGAAGGG+GGG 0.665909 8_2:+13769072 Msa1235670:CDS
TCATTTCGAGATGATTTCGG+GGG 0.671935 8_2:+13769715 Msa1235670:CDS
GTAGATCATTCTCAACGACT+CGG 0.673640 8_2:-13769508 None:intergenic
AGAATGATATGTGATGAAGG+GGG 0.758539 8_2:+13769071 Msa1235670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTATCAAAGAAAATATTTA+CGG - chr8_2:13769574-13769593 None:intergenic 15.0%
!! TGTATCAAAGAAAATATTTA+CGG - chr8_2:13769574-13769593 None:intergenic 15.0%
!! TATCTCAAAAACAAGTTATT+TGG + chr8_2:13768483-13768502 Msa1235670:CDS 20.0%
!!! TTTTTACGAGAAAATAATGA+CGG - chr8_2:13768599-13768618 None:intergenic 20.0%
!! GTATCAAAGAAAATATTTAC+GGG - chr8_2:13769573-13769592 None:intergenic 20.0%
!! TATCTCAAAAACAAGTTATT+TGG + chr8_2:13768483-13768502 Msa1235670:CDS 20.0%
!!! TTTTTACGAGAAAATAATGA+CGG - chr8_2:13768599-13768618 None:intergenic 20.0%
!! GTATCAAAGAAAATATTTAC+GGG - chr8_2:13769573-13769592 None:intergenic 20.0%
!!! ATAACTTGTTTTTGAGATAG+TGG - chr8_2:13768482-13768501 None:intergenic 25.0%
! AGCTATAAAATTGTTGACAA+TGG - chr8_2:13768517-13768536 None:intergenic 25.0%
!! TTTTACGAGAAAATAATGAC+GGG - chr8_2:13768598-13768617 None:intergenic 25.0%
! ACAAATACGCAAATAGTAAA+AGG + chr8_2:13768710-13768729 Msa1235670:CDS 25.0%
! ATAGTAAAAGGTTTAACAGA+AGG + chr8_2:13768722-13768741 Msa1235670:CDS 25.0%
! AAAACACTTGTGTACTATAA+TGG + chr8_2:13768826-13768845 Msa1235670:CDS 25.0%
! ATGTTTAAACTTTATGAGCA+TGG + chr8_2:13768937-13768956 Msa1235670:intron 25.0%
! ATAGAATGATATGTGATGAA+GGG + chr8_2:13769069-13769088 Msa1235670:CDS 25.0%
! ATCAATTCGATGTTAAATGA+CGG + chr8_2:13769428-13769447 Msa1235670:intron 25.0%
!!! ATAACTTGTTTTTGAGATAG+TGG - chr8_2:13768482-13768501 None:intergenic 25.0%
! AGCTATAAAATTGTTGACAA+TGG - chr8_2:13768517-13768536 None:intergenic 25.0%
!! TTTTACGAGAAAATAATGAC+GGG - chr8_2:13768598-13768617 None:intergenic 25.0%
! ACAAATACGCAAATAGTAAA+AGG + chr8_2:13768710-13768729 Msa1235670:CDS 25.0%
! ATAGTAAAAGGTTTAACAGA+AGG + chr8_2:13768722-13768741 Msa1235670:CDS 25.0%
! AAAACACTTGTGTACTATAA+TGG + chr8_2:13768826-13768845 Msa1235670:CDS 25.0%
! ATGTTTAAACTTTATGAGCA+TGG + chr8_2:13768937-13768956 Msa1235670:intron 25.0%
! ATAGAATGATATGTGATGAA+GGG + chr8_2:13769069-13769088 Msa1235670:CDS 25.0%
! ATCAATTCGATGTTAAATGA+CGG + chr8_2:13769428-13769447 Msa1235670:intron 25.0%
!!! GGTTTATTTGGTTTTTTACC+CGG - chr8_2:13768576-13768595 None:intergenic 30.0%
! AAATAATGACGGGGTTTATT+TGG - chr8_2:13768588-13768607 None:intergenic 30.0%
TTTACGAGAAAATAATGACG+GGG - chr8_2:13768597-13768616 None:intergenic 30.0%
TAAAATCCAATGATCCAGAA+TGG + chr8_2:13768665-13768684 Msa1235670:CDS 30.0%
TACCTCTAACCTTAATCTTA+CGG - chr8_2:13768783-13768802 None:intergenic 30.0%
! AGAGGTACAAACAATGTTAT+TGG + chr8_2:13768796-13768815 Msa1235670:CDS 30.0%
GAGGTACAAACAATGTTATT+GGG + chr8_2:13768797-13768816 Msa1235670:CDS 30.0%
TTGTTGTAACAAAACAAACC+TGG - chr8_2:13768918-13768937 None:intergenic 30.0%
! AAAAGTCCTCTACGAAATTT+TGG - chr8_2:13768997-13769016 None:intergenic 30.0%
GATAGAATGATATGTGATGA+AGG + chr8_2:13769068-13769087 Msa1235670:CDS 30.0%
TAGAATGATATGTGATGAAG+GGG + chr8_2:13769070-13769089 Msa1235670:CDS 30.0%
TTGAAGGAATTCTTGATGTA+AGG + chr8_2:13769138-13769157 Msa1235670:intron 30.0%
AAGCATGTTTCATGTAAGAA+CGG - chr8_2:13769220-13769239 None:intergenic 30.0%
CATGAAACATGCTTAGAATA+TGG + chr8_2:13769226-13769245 Msa1235670:intron 30.0%
!!! TGAGAAAGGAAAGTACTTTT+CGG - chr8_2:13769279-13769298 None:intergenic 30.0%
! TTCAATCTCTGAAAATGAGA+TGG + chr8_2:13769310-13769329 Msa1235670:CDS 30.0%
! AAAAGAAGACACACTTTTGT+CGG + chr8_2:13769470-13769489 Msa1235670:intron 30.0%
CATTCTAGTAGCATTTCAAA+AGG - chr8_2:13769645-13769664 None:intergenic 30.0%
!!! CTTTTGAAATGCTACTAGAA+TGG + chr8_2:13769643-13769662 Msa1235670:intron 30.0%
!! GTTTTTGTTTCTTCTTAGAG+TGG - chr8_2:13769821-13769840 None:intergenic 30.0%
!!! GGTTTATTTGGTTTTTTACC+CGG - chr8_2:13768576-13768595 None:intergenic 30.0%
! AAATAATGACGGGGTTTATT+TGG - chr8_2:13768588-13768607 None:intergenic 30.0%
TTTACGAGAAAATAATGACG+GGG - chr8_2:13768597-13768616 None:intergenic 30.0%
TAAAATCCAATGATCCAGAA+TGG + chr8_2:13768665-13768684 Msa1235670:CDS 30.0%
TACCTCTAACCTTAATCTTA+CGG - chr8_2:13768783-13768802 None:intergenic 30.0%
! AGAGGTACAAACAATGTTAT+TGG + chr8_2:13768796-13768815 Msa1235670:CDS 30.0%
GAGGTACAAACAATGTTATT+GGG + chr8_2:13768797-13768816 Msa1235670:CDS 30.0%
TTGTTGTAACAAAACAAACC+TGG - chr8_2:13768918-13768937 None:intergenic 30.0%
! AAAAGTCCTCTACGAAATTT+TGG - chr8_2:13768997-13769016 None:intergenic 30.0%
GATAGAATGATATGTGATGA+AGG + chr8_2:13769068-13769087 Msa1235670:CDS 30.0%
TAGAATGATATGTGATGAAG+GGG + chr8_2:13769070-13769089 Msa1235670:CDS 30.0%
TTGAAGGAATTCTTGATGTA+AGG + chr8_2:13769138-13769157 Msa1235670:intron 30.0%
AAGCATGTTTCATGTAAGAA+CGG - chr8_2:13769220-13769239 None:intergenic 30.0%
CATGAAACATGCTTAGAATA+TGG + chr8_2:13769226-13769245 Msa1235670:intron 30.0%
!!! TGAGAAAGGAAAGTACTTTT+CGG - chr8_2:13769279-13769298 None:intergenic 30.0%
! TTCAATCTCTGAAAATGAGA+TGG + chr8_2:13769310-13769329 Msa1235670:CDS 30.0%
! AAAAGAAGACACACTTTTGT+CGG + chr8_2:13769470-13769489 Msa1235670:intron 30.0%
CATTCTAGTAGCATTTCAAA+AGG - chr8_2:13769645-13769664 None:intergenic 30.0%
!!! CTTTTGAAATGCTACTAGAA+TGG + chr8_2:13769643-13769662 Msa1235670:intron 30.0%
!! GTTTTTGTTTCTTCTTAGAG+TGG - chr8_2:13769821-13769840 None:intergenic 30.0%
ATGACAAACTCATTTCCTGT+TGG + chr8_2:13768420-13768439 Msa1235670:CDS 35.0%
TTTACAAGCTCTTCATCTGT+TGG - chr8_2:13768459-13768478 None:intergenic 35.0%
GAAAAACCATTCTGGATCAT+TGG - chr8_2:13768674-13768693 None:intergenic 35.0%
GGACAAAAGAAAAACCATTC+TGG - chr8_2:13768682-13768701 None:intergenic 35.0%
ACAAACCTGGTTATCATCAA+AGG - chr8_2:13768905-13768924 None:intergenic 35.0%
!!! GAGCATGGTATGAGTTTTTT+CGG + chr8_2:13768952-13768971 Msa1235670:intron 35.0%
TATCCTCCAAAATTTCGTAG+AGG + chr8_2:13768988-13769007 Msa1235670:intron 35.0%
!!! TTCCTCTTCAGCTTTTTTCT+CGG - chr8_2:13769045-13769064 None:intergenic 35.0%
AGAATGATATGTGATGAAGG+GGG + chr8_2:13769071-13769090 Msa1235670:CDS 35.0%
GAAAATCAAGAAGCAGTTGA+AGG + chr8_2:13769122-13769141 Msa1235670:CDS 35.0%
GAATATGGAACCAATGTTTC+AGG + chr8_2:13769241-13769260 Msa1235670:intron 35.0%
! CATTTTCAGAGATTGAAGAC+TGG - chr8_2:13769307-13769326 None:intergenic 35.0%
! GAAGTATCTTTATCGAACTC+AGG + chr8_2:13769332-13769351 Msa1235670:intron 35.0%
! GGATTTTATGATTCCGAAAG+TGG + chr8_2:13769353-13769372 Msa1235670:intron 35.0%
CATATCAATGTGTCCACTTT+CGG - chr8_2:13769369-13769388 None:intergenic 35.0%
TCCTCGTCAATAGTTTCAAA+CGG - chr8_2:13769398-13769417 None:intergenic 35.0%
TCGTTGAGAATGATCTACTA+TGG + chr8_2:13769513-13769532 Msa1235670:CDS 35.0%
! GCTTTATTCATACTGTGATG+TGG + chr8_2:13769606-13769625 Msa1235670:intron 35.0%
CTACTAGAATGGAACTTCAA+CGG + chr8_2:13769654-13769673 Msa1235670:intron 35.0%
TTTCTTGAACATCCTAGTTC+AGG + chr8_2:13769679-13769698 Msa1235670:CDS 35.0%
GCATCATTTCGAGATGATTT+CGG + chr8_2:13769712-13769731 Msa1235670:CDS 35.0%
CATCATTTCGAGATGATTTC+GGG + chr8_2:13769713-13769732 Msa1235670:CDS 35.0%
ATCATTTCGAGATGATTTCG+GGG + chr8_2:13769714-13769733 Msa1235670:CDS 35.0%
! TTGTTTCTTCTTAGAGTGGA+AGG - chr8_2:13769817-13769836 None:intergenic 35.0%
ATGACAAACTCATTTCCTGT+TGG + chr8_2:13768420-13768439 Msa1235670:CDS 35.0%
TTTACAAGCTCTTCATCTGT+TGG - chr8_2:13768459-13768478 None:intergenic 35.0%
GAAAAACCATTCTGGATCAT+TGG - chr8_2:13768674-13768693 None:intergenic 35.0%
GGACAAAAGAAAAACCATTC+TGG - chr8_2:13768682-13768701 None:intergenic 35.0%
ACAAACCTGGTTATCATCAA+AGG - chr8_2:13768905-13768924 None:intergenic 35.0%
!!! GAGCATGGTATGAGTTTTTT+CGG + chr8_2:13768952-13768971 Msa1235670:intron 35.0%
TATCCTCCAAAATTTCGTAG+AGG + chr8_2:13768988-13769007 Msa1235670:intron 35.0%
!!! TTCCTCTTCAGCTTTTTTCT+CGG - chr8_2:13769045-13769064 None:intergenic 35.0%
AGAATGATATGTGATGAAGG+GGG + chr8_2:13769071-13769090 Msa1235670:CDS 35.0%
GAAAATCAAGAAGCAGTTGA+AGG + chr8_2:13769122-13769141 Msa1235670:CDS 35.0%
GAATATGGAACCAATGTTTC+AGG + chr8_2:13769241-13769260 Msa1235670:intron 35.0%
! CATTTTCAGAGATTGAAGAC+TGG - chr8_2:13769307-13769326 None:intergenic 35.0%
! GAAGTATCTTTATCGAACTC+AGG + chr8_2:13769332-13769351 Msa1235670:intron 35.0%
! GGATTTTATGATTCCGAAAG+TGG + chr8_2:13769353-13769372 Msa1235670:intron 35.0%
CATATCAATGTGTCCACTTT+CGG - chr8_2:13769369-13769388 None:intergenic 35.0%
TCCTCGTCAATAGTTTCAAA+CGG - chr8_2:13769398-13769417 None:intergenic 35.0%
TCGTTGAGAATGATCTACTA+TGG + chr8_2:13769513-13769532 Msa1235670:CDS 35.0%
! GCTTTATTCATACTGTGATG+TGG + chr8_2:13769606-13769625 Msa1235670:intron 35.0%
CTACTAGAATGGAACTTCAA+CGG + chr8_2:13769654-13769673 Msa1235670:intron 35.0%
TTTCTTGAACATCCTAGTTC+AGG + chr8_2:13769679-13769698 Msa1235670:CDS 35.0%
GCATCATTTCGAGATGATTT+CGG + chr8_2:13769712-13769731 Msa1235670:CDS 35.0%
CATCATTTCGAGATGATTTC+GGG + chr8_2:13769713-13769732 Msa1235670:CDS 35.0%
ATCATTTCGAGATGATTTCG+GGG + chr8_2:13769714-13769733 Msa1235670:CDS 35.0%
! TTGTTTCTTCTTAGAGTGGA+AGG - chr8_2:13769817-13769836 None:intergenic 35.0%
ATGTTTGCAAGTTCGAACCT+TGG + chr8_2:13768544-13768563 Msa1235670:CDS 40.0%
TGTTTGCAAGTTCGAACCTT+GGG + chr8_2:13768545-13768564 Msa1235670:CDS 40.0%
TTTGCGTATTTGTAATCGCG+AGG - chr8_2:13768703-13768722 None:intergenic 40.0%
TTTAACAGAAGGACAGAGTG+TGG + chr8_2:13768733-13768752 Msa1235670:CDS 40.0%
! TGGTCTTGACCGTAAGATTA+AGG + chr8_2:13768771-13768790 Msa1235670:CDS 40.0%
GACCGTAAGATTAAGGTTAG+AGG + chr8_2:13768778-13768797 Msa1235670:CDS 40.0%
TACTATAATGGTTGTGCTCC+TGG + chr8_2:13768838-13768857 Msa1235670:CDS 40.0%
! TCCTGGTGTTAAAAGCAACT+GGG + chr8_2:13768855-13768874 Msa1235670:CDS 40.0%
! TACCACCTTTGATGATAACC+AGG + chr8_2:13768897-13768916 Msa1235670:CDS 40.0%
AACCTGGTTATCATCAAAGG+TGG - chr8_2:13768902-13768921 None:intergenic 40.0%
! AGTCCTCTACGAAATTTTGG+AGG - chr8_2:13768994-13769013 None:intergenic 40.0%
GAATGATATGTGATGAAGGG+GGG + chr8_2:13769072-13769091 Msa1235670:CDS 40.0%
TCGGAACTCATGTGTTTACT+TGG - chr8_2:13769098-13769117 None:intergenic 40.0%
! TGCTTCTTGATTTTCGCGAT+CGG - chr8_2:13769117-13769136 None:intergenic 40.0%
TGATGAGGTTCCTGAAACAT+TGG - chr8_2:13769254-13769273 None:intergenic 40.0%
AATGTTTCAGGAACCTCATC+AGG + chr8_2:13769253-13769272 Msa1235670:intron 40.0%
GAAGACTGGTATGTTGAGAA+AGG - chr8_2:13769293-13769312 None:intergenic 40.0%
! TCCGTTTGAAACTATTGACG+AGG + chr8_2:13769394-13769413 Msa1235670:intron 40.0%
GTAGATCATTCTCAACGACT+CGG - chr8_2:13769511-13769530 None:intergenic 40.0%
GCATAGTATTCTCCTGAACT+AGG - chr8_2:13769694-13769713 None:intergenic 40.0%
TCATTTCGAGATGATTTCGG+GGG + chr8_2:13769715-13769734 Msa1235670:CDS 40.0%
ACACAATTGATCATCTCCCT+AGG - chr8_2:13769778-13769797 None:intergenic 40.0%
! AGCTCTTTTTGACATGAAGG+TGG - chr8_2:13769863-13769882 None:intergenic 40.0%
! AGCAGCTCTTTTTGACATGA+AGG - chr8_2:13769866-13769885 None:intergenic 40.0%
ATGTTTGCAAGTTCGAACCT+TGG + chr8_2:13768544-13768563 Msa1235670:CDS 40.0%
TGTTTGCAAGTTCGAACCTT+GGG + chr8_2:13768545-13768564 Msa1235670:CDS 40.0%
TTTGCGTATTTGTAATCGCG+AGG - chr8_2:13768703-13768722 None:intergenic 40.0%
TTTAACAGAAGGACAGAGTG+TGG + chr8_2:13768733-13768752 Msa1235670:CDS 40.0%
! TGGTCTTGACCGTAAGATTA+AGG + chr8_2:13768771-13768790 Msa1235670:CDS 40.0%
GACCGTAAGATTAAGGTTAG+AGG + chr8_2:13768778-13768797 Msa1235670:CDS 40.0%
TACTATAATGGTTGTGCTCC+TGG + chr8_2:13768838-13768857 Msa1235670:CDS 40.0%
! TCCTGGTGTTAAAAGCAACT+GGG + chr8_2:13768855-13768874 Msa1235670:CDS 40.0%
! TACCACCTTTGATGATAACC+AGG + chr8_2:13768897-13768916 Msa1235670:CDS 40.0%
AACCTGGTTATCATCAAAGG+TGG - chr8_2:13768902-13768921 None:intergenic 40.0%
! AGTCCTCTACGAAATTTTGG+AGG - chr8_2:13768994-13769013 None:intergenic 40.0%
GAATGATATGTGATGAAGGG+GGG + chr8_2:13769072-13769091 Msa1235670:CDS 40.0%
TCGGAACTCATGTGTTTACT+TGG - chr8_2:13769098-13769117 None:intergenic 40.0%
! TGCTTCTTGATTTTCGCGAT+CGG - chr8_2:13769117-13769136 None:intergenic 40.0%
TGATGAGGTTCCTGAAACAT+TGG - chr8_2:13769254-13769273 None:intergenic 40.0%
AATGTTTCAGGAACCTCATC+AGG + chr8_2:13769253-13769272 Msa1235670:intron 40.0%
GAAGACTGGTATGTTGAGAA+AGG - chr8_2:13769293-13769312 None:intergenic 40.0%
! TCCGTTTGAAACTATTGACG+AGG + chr8_2:13769394-13769413 Msa1235670:intron 40.0%
GTAGATCATTCTCAACGACT+CGG - chr8_2:13769511-13769530 None:intergenic 40.0%
GCATAGTATTCTCCTGAACT+AGG - chr8_2:13769694-13769713 None:intergenic 40.0%
TCATTTCGAGATGATTTCGG+GGG + chr8_2:13769715-13769734 Msa1235670:CDS 40.0%
ACACAATTGATCATCTCCCT+AGG - chr8_2:13769778-13769797 None:intergenic 40.0%
! AGCTCTTTTTGACATGAAGG+TGG - chr8_2:13769863-13769882 None:intergenic 40.0%
! AGCAGCTCTTTTTGACATGA+AGG - chr8_2:13769866-13769885 None:intergenic 40.0%
GGTTGGAATCTGAATCCAAC+AGG - chr8_2:13768438-13768457 None:intergenic 45.0%
CAAGCTCTTCATCTGTTGGT+TGG - chr8_2:13768455-13768474 None:intergenic 45.0%
! TTTTTACCCGGTAAGTCCCA+AGG - chr8_2:13768564-13768583 None:intergenic 45.0%
AATCTTACGGTCAAGACCAG+TGG - chr8_2:13768770-13768789 None:intergenic 45.0%
! CTCCTGGTGTTAAAAGCAAC+TGG + chr8_2:13768854-13768873 Msa1235670:CDS 45.0%
!!! ACCCAGTTGCTTTTAACACC+AGG - chr8_2:13768859-13768878 None:intergenic 45.0%
AGCCGAGAAAAAAGCTGAAG+AGG + chr8_2:13769040-13769059 Msa1235670:CDS 45.0%
! AAGTACTTTTCGGCCTGATG+AGG - chr8_2:13769269-13769288 None:intergenic 45.0%
AGATGATTTCGGGGGATTTG+AGG + chr8_2:13769723-13769742 Msa1235670:CDS 45.0%
ACTCGACTGCAGATAAACCT+AGG + chr8_2:13769758-13769777 Msa1235670:CDS 45.0%
CTCGACTGCAGATAAACCTA+GGG + chr8_2:13769759-13769778 Msa1235670:CDS 45.0%
! CTTTTTGACATGAAGGTGGC+TGG - chr8_2:13769859-13769878 None:intergenic 45.0%
GGTTGGAATCTGAATCCAAC+AGG - chr8_2:13768438-13768457 None:intergenic 45.0%
CAAGCTCTTCATCTGTTGGT+TGG - chr8_2:13768455-13768474 None:intergenic 45.0%
! TTTTTACCCGGTAAGTCCCA+AGG - chr8_2:13768564-13768583 None:intergenic 45.0%
AATCTTACGGTCAAGACCAG+TGG - chr8_2:13768770-13768789 None:intergenic 45.0%
! CTCCTGGTGTTAAAAGCAAC+TGG + chr8_2:13768854-13768873 Msa1235670:CDS 45.0%
!!! ACCCAGTTGCTTTTAACACC+AGG - chr8_2:13768859-13768878 None:intergenic 45.0%
AGCCGAGAAAAAAGCTGAAG+AGG + chr8_2:13769040-13769059 Msa1235670:CDS 45.0%
! AAGTACTTTTCGGCCTGATG+AGG - chr8_2:13769269-13769288 None:intergenic 45.0%
AGATGATTTCGGGGGATTTG+AGG + chr8_2:13769723-13769742 Msa1235670:CDS 45.0%
ACTCGACTGCAGATAAACCT+AGG + chr8_2:13769758-13769777 Msa1235670:CDS 45.0%
CTCGACTGCAGATAAACCTA+GGG + chr8_2:13769759-13769778 Msa1235670:CDS 45.0%
! CTTTTTGACATGAAGGTGGC+TGG - chr8_2:13769859-13769878 None:intergenic 45.0%
GTTCGAACCTTGGGACTTAC+CGG + chr8_2:13768554-13768573 Msa1235670:CDS 50.0%
TTCGAACCTTGGGACTTACC+GGG + chr8_2:13768555-13768574 Msa1235670:CDS 50.0%
GAAGGACAGAGTGTGGATAC+TGG + chr8_2:13768740-13768759 Msa1235670:CDS 50.0%
TGTGGATACTGGAAAGCCAC+TGG + chr8_2:13768751-13768770 Msa1235670:CDS 50.0%
! TCATTCTCAACGACTCGGAC+TGG - chr8_2:13769506-13769525 None:intergenic 50.0%
ATCTGCAGTCGAGTCACAAG+AGG - chr8_2:13769752-13769771 None:intergenic 50.0%
!! TGGCTGGTCTTGGATGATAC+TGG - chr8_2:13769843-13769862 None:intergenic 50.0%
GTTCGAACCTTGGGACTTAC+CGG + chr8_2:13768554-13768573 Msa1235670:CDS 50.0%
TTCGAACCTTGGGACTTACC+GGG + chr8_2:13768555-13768574 Msa1235670:CDS 50.0%
GAAGGACAGAGTGTGGATAC+TGG + chr8_2:13768740-13768759 Msa1235670:CDS 50.0%
TGTGGATACTGGAAAGCCAC+TGG + chr8_2:13768751-13768770 Msa1235670:CDS 50.0%
! TCATTCTCAACGACTCGGAC+TGG - chr8_2:13769506-13769525 None:intergenic 50.0%
ATCTGCAGTCGAGTCACAAG+AGG - chr8_2:13769752-13769771 None:intergenic 50.0%
!! TGGCTGGTCTTGGATGATAC+TGG - chr8_2:13769843-13769862 None:intergenic 50.0%
!! GACATGAAGGTGGCTGGTCT+TGG - chr8_2:13769853-13769872 None:intergenic 55.0%
!! GACATGAAGGTGGCTGGTCT+TGG - chr8_2:13769853-13769872 None:intergenic 55.0%
! CTCAACGACTCGGACTGGAC+AGG - chr8_2:13769501-13769520 None:intergenic 60.0%
! CTCAACGACTCGGACTGGAC+AGG - chr8_2:13769501-13769520 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 13768420 13769906 13768420 ID=Msa1235670;Name=Msa1235670
chr8_2 mRNA 13768420 13769906 13768420 ID=Msa1235670-mRNA-1;Parent=Msa1235670;Name=Msa1235670-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0|0|1|1|1|6|0|307
chr8_2 exon 13768420 13768576 13768420 ID=Msa1235670-mRNA-1:exon:5291;Parent=Msa1235670-mRNA-1
chr8_2 exon 13768653 13768918 13768653 ID=Msa1235670-mRNA-1:exon:5292;Parent=Msa1235670-mRNA-1
chr8_2 exon 13769038 13769154 13769038 ID=Msa1235670-mRNA-1:exon:5293;Parent=Msa1235670-mRNA-1
chr8_2 exon 13769263 13769334 13769263 ID=Msa1235670-mRNA-1:exon:5294;Parent=Msa1235670-mRNA-1
chr8_2 exon 13769507 13769572 13769507 ID=Msa1235670-mRNA-1:exon:5295;Parent=Msa1235670-mRNA-1
chr8_2 exon 13769661 13769906 13769661 ID=Msa1235670-mRNA-1:exon:5296;Parent=Msa1235670-mRNA-1
chr8_2 CDS 13768420 13768576 13768420 ID=Msa1235670-mRNA-1:cds;Parent=Msa1235670-mRNA-1
chr8_2 CDS 13768653 13768918 13768653 ID=Msa1235670-mRNA-1:cds;Parent=Msa1235670-mRNA-1
chr8_2 CDS 13769038 13769154 13769038 ID=Msa1235670-mRNA-1:cds;Parent=Msa1235670-mRNA-1
chr8_2 CDS 13769263 13769334 13769263 ID=Msa1235670-mRNA-1:cds;Parent=Msa1235670-mRNA-1
chr8_2 CDS 13769507 13769572 13769507 ID=Msa1235670-mRNA-1:cds;Parent=Msa1235670-mRNA-1
chr8_2 CDS 13769661 13769906 13769661 ID=Msa1235670-mRNA-1:cds;Parent=Msa1235670-mRNA-1
Gene Sequence

>Msa1235670

ATGACAAACTCATTTCCTGTTGGATTCAGATTCCAACCAACAGATGAAGAGCTTGTAAACCACTATCTCAAAAACAAGTTATTTGGTAATGATTCCATTGTCAACAATTTTATAGCTGAAGTCGATGTTTGCAAGTTCGAACCTTGGGACTTACCGGCTTGTTCAATCATAAAATCCAATGATCCAGAATGGTTTTTCTTTTGTCCTCGCGATTACAAATACGCAAATAGTAAAAGGTTTAACAGAAGGACAGAGTGTGGATACTGGAAAGCCACTGGTCTTGACCGTAAGATTAAGGTTAGAGGTACAAACAATGTTATTGGGACTAAGAAAACACTTGTGTACTATAATGGTTGTGCTCCTGGTGTTAAAAGCAACTGGGTGATTCATGAATATCATTCTACCACCTTTGATGATAACCAGAAAGCCGAGAAAAAAGCTGAAGAGGAAACTGATAGAATGATATGTGATGAAGGGGGGCCAAGTAAACACATGAGTTCCGATCGCGAAAATCAAGAAGCAGTTGAAGGAATTCTTGATGAACCTCATCAGGCCGAAAAGTACTTTCCTTTCTCAACATACCAGTCTTCAATCTCTGAAAATGAGATGGAATCCGAGTCGTTGAGAATGATCTACTATGGAAGCAGTGACACAGATGTTGAATTAGTCTCTACGCCCAATGGAACTTCAACGGCATTTCTTGAACATCCTAGTTCAGGAGAATACTATGCATCATTTCGAGATGATTTCGGGGGATTTGAGGCATCCTCTTGTGACTCGACTGCAGATAAACCTAGGGAGATGATCAATTGTGTTGAAATTTCTAGTGCACCTTCCACTCTAAGAAGAAACAAAAACCAGTATCATCCAAGACCAGCCACCTTCATGTCAAAAAGAGCTGCTTCAAGACGATCTCAAACATAG
Protein sequence

>Msa1235670

MTNSFPVGFRFQPTDEELVNHYLKNKLFGNDSIVNNFIAEVDVCKFEPWDLPACSIIKSNDPEWFFFCPRDYKYANSKRFNRRTECGYWKATGLDRKIKVRGTNNVIGTKKTLVYYNGCAPGVKSNWVIHEYHSTTFDDNQKAEKKAEEETDRMICDEGGPSKHMSSDRENQEAVEGILDEPHQAEKYFPFSTYQSSISENEMESESLRMIYYGSSDTDVELVSTPNGTSTAFLEHPSSGEYYASFRDDFGGFEASSCDSTADKPREMINCVEISSAPSTLRRNKNQYHPRPATFMSKRAASRRSQT*