AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1235710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1235710 MtrunA17_Chr8g0345691 68.571 280 84 3 12 290 1 277 4.10e-132 381
Msa1235710 MtrunA17_Chr8g0345671 65.972 288 96 1 12 299 1 286 2.84e-131 378
Msa1235710 MtrunA17_Chr8g0345721 65.241 187 35 2 1 158 15 200 4.20e-83 249
Msa1235710 MtrunA17_Chr8g0345741 82.609 138 24 0 33 170 2 139 3.08e-81 242
Msa1235710 MtrunA17_Chr8g0345711 64.286 154 53 2 12 163 1 154 1.90e-66 205
Msa1235710 MtrunA17_Chr8g0345731 62.500 152 51 4 21 166 22 173 1.47e-59 187
Msa1235710 MtrunA17_Chr3g0128111 47.126 174 77 6 23 189 43 208 7.54e-46 155
Msa1235710 MtrunA17_Chr8g0345701 51.948 154 52 5 11 150 2 147 9.90e-44 147
Msa1235710 MtrunA17_Chr5g0428991 50.000 160 69 5 24 176 27 182 1.64e-43 157
Msa1235710 MtrunA17_Chr3g0128151 49.686 159 69 5 24 175 24 178 1.89e-43 156
Msa1235710 MtrunA17_Chr8g0364791 43.506 154 78 5 22 169 6 156 1.02e-39 144
Msa1235710 MtrunA17_Chr8g0384201 44.156 154 77 5 22 169 6 156 1.26e-38 142
Msa1235710 MtrunA17_Chr2g0309891 45.752 153 73 4 25 170 9 158 3.92e-38 137
Msa1235710 MtrunA17_Chr1g0197361 45.695 151 75 4 25 170 11 159 1.12e-37 140
Msa1235710 MtrunA17_Chr6g0481091 38.362 232 122 7 25 248 9 227 3.89e-37 132
Msa1235710 MtrunA17_Chr3g0130101 43.506 154 78 5 22 169 7 157 1.80e-36 133
Msa1235710 MtrunA17_Chr5g0433781 44.785 163 75 5 14 170 4 157 2.11e-36 137
Msa1235710 MtrunA17_Chr5g0400461 42.442 172 84 5 14 177 4 168 2.17e-36 132
Msa1235710 MtrunA17_Chr3g0109821 37.915 211 107 6 14 209 4 205 3.40e-36 137
Msa1235710 MtrunA17_Chr4g0054791 39.819 221 113 9 14 225 4 213 6.06e-36 131
Msa1235710 MtrunA17_Chr2g0318101 34.354 294 170 12 7 297 2 275 6.67e-34 126
Msa1235710 MtrunA17_Chr3g0092671 42.384 151 80 3 25 170 8 156 1.43e-33 129
Msa1235710 MtrunA17_Chr1g0197351 43.949 157 73 4 25 169 45 198 5.03e-33 126
Msa1235710 MtrunA17_Chr1g0183741 38.068 176 96 6 10 181 4 170 6.64e-32 119
Msa1235710 MtrunA17_Chr3g0139331 41.333 150 81 4 25 170 14 160 2.93e-31 119
Msa1235710 MtrunA17_Chr3g0124761 39.080 174 90 6 20 184 5 171 9.80e-31 117
Msa1235710 MtrunA17_Chr1g0147421 37.647 170 94 4 5 170 16 177 1.21e-30 118
Msa1235710 MtrunA17_Chr2g0321741 48.462 130 60 6 43 171 13 136 1.22e-30 118
Msa1235710 MtrunA17_Chr4g0017921 43.624 149 77 5 25 169 11 156 1.78e-30 117
Msa1235710 MtrunA17_Chr4g0018391 33.103 290 162 12 25 291 10 290 2.60e-30 117
Msa1235710 MtrunA17_Chr8g0385991 40.741 162 80 4 25 175 17 173 2.83e-30 114
Msa1235710 MtrunA17_Chr4g0047841 35.149 202 97 5 13 185 6 202 3.00e-30 116
Msa1235710 MtrunA17_Chr7g0263931 39.355 155 81 5 25 169 14 165 3.38e-30 116
Msa1235710 MtrunA17_Chr1g0201021 43.871 155 76 6 16 168 13 158 4.88e-30 119
Msa1235710 MtrunA17_Chr2g0311661 31.071 280 149 8 25 281 24 282 5.23e-30 115
Msa1235710 MtrunA17_Chr3g0130731 41.358 162 80 5 20 172 5 160 5.92e-30 114
Msa1235710 MtrunA17_Chr6g0453131 38.788 165 82 5 21 170 14 174 9.31e-30 116
Msa1235710 MtrunA17_Chr8g0384721 35.385 195 107 6 19 200 4 192 1.07e-29 114
Msa1235710 MtrunA17_Chr5g0405211 38.286 175 94 6 12 181 4 169 1.15e-29 115
Msa1235710 MtrunA17_Chr8g0372121 39.877 163 84 6 12 169 2 155 1.16e-29 114
Msa1235710 MtrunA17_Chr7g0252971 37.430 179 78 7 14 171 6 171 1.28e-29 115
Msa1235710 MtrunA17_Chr2g0326361 37.234 188 95 7 15 198 13 181 1.76e-29 114
Msa1235710 MtrunA17_Chr1g0200561 40.000 170 88 6 5 169 8 168 1.85e-29 114
Msa1235710 MtrunA17_Chr8g0361731 36.747 166 87 4 25 175 17 179 2.02e-29 115
Msa1235710 MtrunA17_Chr2g0309331 40.828 169 87 6 25 182 13 179 2.05e-29 114
Msa1235710 MtrunA17_Chr4g0038751 39.189 148 85 4 25 170 18 162 2.18e-29 113
Msa1235710 MtrunA17_Chr7g0261411 38.994 159 86 5 10 166 4 153 2.29e-29 113
Msa1235710 MtrunA17_Chr4g0042561 42.138 159 69 6 25 169 12 161 2.49e-29 112
Msa1235710 MtrunA17_Chr2g0316971 45.238 126 65 3 25 149 26 148 4.41e-29 114
Msa1235710 MtrunA17_Chr6g0461661 40.909 132 74 3 20 150 16 144 5.42e-29 114
Msa1235710 MtrunA17_Chr4g0076731 39.286 168 91 7 21 183 52 213 6.18e-29 114
Msa1235710 MtrunA17_Chr7g0217721 42.384 151 78 6 1 150 1 143 6.24e-29 113
Msa1235710 MtrunA17_Chr4g0026141 37.349 166 86 5 12 166 1 159 7.24e-29 111
Msa1235710 MtrunA17_Chr4g0060931 37.736 159 86 7 20 170 15 168 9.47e-29 113
Msa1235710 MtrunA17_Chr5g0398971 42.484 153 76 6 25 169 10 158 1.42e-28 112
Msa1235710 MtrunA17_Chr5g0417001 36.875 160 84 4 25 170 17 173 1.63e-28 112
Msa1235710 MtrunA17_Chr5g0417791 40.571 175 79 8 20 180 1 164 1.65e-28 110
Msa1235710 MtrunA17_Chr4g0056541 39.744 156 86 5 25 175 10 162 2.00e-28 112
Msa1235710 MtrunA17_Chr2g0318081 37.079 178 87 7 15 182 15 177 2.86e-28 111
Msa1235710 MtrunA17_Chr7g0214071 40.268 149 79 4 25 169 18 160 3.26e-28 109
Msa1235710 MtrunA17_Chr6g0484441 38.037 163 86 7 12 170 1 152 7.26e-28 110
Msa1235710 MtrunA17_Chr7g0253011 40.559 143 78 5 19 157 14 153 7.77e-28 110
Msa1235710 MtrunA17_Chr3g0091921 39.610 154 80 7 25 170 19 167 7.80e-28 109
Msa1235710 MtrunA17_Chr7g0217711 44.275 131 67 5 20 149 17 142 8.22e-28 106
Msa1235710 MtrunA17_Chr2g0312321 36.782 174 94 6 25 189 14 180 8.67e-28 109
Msa1235710 MtrunA17_Chr3g0144271 37.333 150 85 3 1 149 8 149 9.95e-28 111
Msa1235710 MtrunA17_Chr8g0359921 39.264 163 80 7 15 169 13 164 8.86e-27 107
Msa1235710 MtrunA17_Chr2g0311651 37.195 164 82 5 25 169 25 186 1.69e-26 105
Msa1235710 MtrunA17_Chr6g0453451 40.940 149 76 5 25 172 23 160 1.83e-26 106
Msa1235710 MtrunA17_Chr8g0346001 36.957 184 94 8 25 192 18 195 1.02e-25 105
Msa1235710 MtrunA17_Chr2g0321631 37.662 154 83 5 25 166 7 159 5.01e-25 100
Msa1235710 MtrunA17_Chr3g0131911 36.970 165 85 5 25 175 17 176 7.64e-25 100
Msa1235710 MtrunA17_Chr7g0266701 35.404 161 89 5 25 171 7 166 3.50e-24 98.6
Msa1235710 MtrunA17_Chr5g0442771 40.945 127 70 4 25 149 21 144 1.34e-23 98.2
Msa1235710 MtrunA17_Chr3g0113001 36.986 146 67 7 80 216 20 149 3.99e-17 80.1
Msa1235710 MtrunA17_Chr4g0050701 27.011 174 98 7 25 183 14 173 1.33e-15 73.6
Msa1235710 MtrunA17_Chr7g0243371 40.000 85 49 2 68 150 6 90 7.19e-14 67.0
Msa1235710 MtrunA17_Chr3g0130321 26.606 218 120 7 13 206 4 205 7.76e-14 69.3
Msa1235710 MtrunA17_Chr8g0384351 30.872 149 82 7 25 172 13 141 1.47e-13 67.8
Msa1235710 MtrunA17_Chr7g0274971 29.341 167 82 8 28 173 11 162 6.12e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1235710 AT4G01550.1 37.884 293 135 10 23 292 5 273 1.86e-48 167
Msa1235710 AT3G49530.2 54.194 155 61 5 24 171 15 166 1.26e-47 164
Msa1235710 AT3G49530.1 54.194 155 61 5 24 171 15 166 5.06e-47 164
Msa1235710 AT4G35580.1 52.201 159 67 4 24 176 11 166 3.45e-46 163
Msa1235710 AT4G35580.3 52.866 157 65 4 24 174 11 164 3.72e-46 163
Msa1235710 AT4G35580.2 52.866 157 65 4 24 174 11 164 3.90e-46 163
Msa1235710 AT5G24590.2 50.307 163 72 5 24 179 15 175 2.21e-45 159
Msa1235710 AT1G33060.1 54.605 152 60 5 24 169 26 174 6.19e-45 161
Msa1235710 AT1G33060.2 54.605 152 60 5 24 169 26 174 6.49e-45 161
Msa1235710 AT4G01520.1 38.710 217 116 7 25 229 7 218 8.31e-44 152
Msa1235710 AT4G01540.4 39.796 196 106 5 23 206 5 200 1.30e-42 150
Msa1235710 AT4G01540.2 37.900 219 119 7 23 229 5 218 2.70e-42 150
Msa1235710 AT4G01540.3 37.900 219 119 7 23 229 5 218 5.81e-42 150
Msa1235710 AT4G01540.1 37.900 219 119 7 23 229 5 218 7.45e-42 150
Msa1235710 AT4G17980.1 47.097 155 73 3 25 171 9 162 6.53e-41 143
Msa1235710 AT4G17980.2 47.097 155 73 3 25 171 9 162 9.58e-41 143
Msa1235710 AT3G10490.1 42.604 169 81 5 8 169 19 178 5.30e-40 140
Msa1235710 AT5G17260.1 46.512 172 74 6 14 178 4 164 8.52e-40 145
Msa1235710 AT3G10480.1 46.053 152 72 4 25 169 30 178 8.56e-40 144
Msa1235710 AT3G03200.1 46.784 171 73 6 15 178 5 164 2.54e-39 144
Msa1235710 AT3G10480.2 45.695 151 73 4 25 169 30 177 3.73e-39 143
Msa1235710 AT3G10490.2 43.636 165 77 5 12 169 23 178 1.80e-38 141
Msa1235710 AT2G27300.1 37.788 217 114 8 5 215 4 205 6.26e-38 137
Msa1235710 AT3G10500.1 45.833 168 76 7 9 170 2 160 1.12e-36 137
Msa1235710 AT3G17730.1 43.182 176 81 6 25 194 9 171 1.41e-36 131
Msa1235710 AT1G65910.1 45.679 162 73 6 15 170 5 157 7.11e-36 136
Msa1235710 AT5G04410.1 42.857 168 81 5 9 170 2 160 8.59e-36 135
Msa1235710 AT5G08790.1 34.058 276 152 9 20 271 5 274 8.70e-36 130
Msa1235710 AT5G46590.1 45.455 154 75 4 25 171 9 160 1.93e-35 129
Msa1235710 AT3G44290.2 42.236 161 79 6 12 171 11 158 5.20e-35 127
Msa1235710 AT5G22290.1 40.571 175 87 7 2 173 8 168 9.18e-35 129
Msa1235710 AT5G09330.5 46.753 154 67 5 25 169 9 156 9.89e-35 131
Msa1235710 AT5G09330.2 46.753 154 67 5 25 169 9 156 9.89e-35 131
Msa1235710 AT5G09330.4 46.753 154 67 5 25 169 9 156 9.89e-35 131
Msa1235710 AT5G09330.3 46.753 154 67 5 25 169 9 156 9.89e-35 131
Msa1235710 AT5G09330.1 46.753 154 67 5 25 169 9 156 9.89e-35 131
Msa1235710 AT1G02230.1 41.722 151 83 4 24 171 5 153 5.82e-34 127
Msa1235710 AT3G44290.1 42.236 161 79 6 12 171 11 158 6.03e-34 127
Msa1235710 AT5G64060.1 43.709 151 76 4 25 169 9 156 1.24e-33 126
Msa1235710 AT3G10480.3 37.563 197 74 7 13 169 24 211 1.73e-33 129
Msa1235710 AT5G46590.2 48.031 127 63 3 25 150 9 133 9.92e-33 122
Msa1235710 AT5G39820.1 43.662 142 75 4 21 160 18 156 2.04e-32 122
Msa1235710 AT5G61430.1 41.509 159 80 7 20 170 14 167 3.43e-32 122
Msa1235710 AT1G01720.1 41.875 160 77 5 20 169 5 158 7.76e-32 120
Msa1235710 AT5G07680.2 39.766 171 90 7 20 182 1 166 1.35e-31 120
Msa1235710 AT5G07680.1 39.766 171 90 7 20 182 15 180 1.68e-31 120
Msa1235710 AT1G54330.1 43.038 158 78 5 15 169 5 153 1.90e-31 119
Msa1235710 AT3G04070.2 36.649 191 95 7 9 183 3 183 2.08e-31 120
Msa1235710 AT1G32510.1 35.652 230 121 8 12 223 1 221 2.77e-31 118
Msa1235710 AT1G26870.1 35.468 203 99 6 22 195 16 215 4.46e-31 120
Msa1235710 AT1G69490.1 39.759 166 79 7 14 169 7 161 5.11e-31 117
Msa1235710 AT5G63790.1 39.205 176 87 6 8 169 33 202 5.23e-31 118
Msa1235710 AT5G63790.2 39.205 176 87 6 8 169 43 212 6.28e-31 118
Msa1235710 AT5G66300.1 41.212 165 78 7 13 169 9 162 7.55e-31 117
Msa1235710 AT2G17040.1 40.541 148 83 4 25 170 9 153 8.25e-31 117
Msa1235710 AT5G62380.2 36.585 205 115 8 25 223 10 205 8.71e-31 118
Msa1235710 AT5G62380.1 36.585 205 115 8 25 223 10 205 8.71e-31 118
Msa1235710 AT5G04395.1 40.385 156 73 5 14 156 26 174 9.95e-31 114
Msa1235710 AT3G12910.1 35.233 193 102 5 25 197 24 213 1.13e-30 117
Msa1235710 AT2G24430.2 40.123 162 83 5 15 171 15 167 1.13e-30 117
Msa1235710 AT2G24430.1 40.123 162 83 5 15 171 15 167 1.13e-30 117
Msa1235710 AT5G18270.2 34.466 206 113 8 20 216 19 211 2.09e-30 117
Msa1235710 AT1G34190.1 43.226 155 73 5 25 170 19 167 2.40e-30 120
Msa1235710 AT1G76420.1 39.490 157 85 5 25 174 25 178 2.77e-30 117
Msa1235710 AT1G02250.1 42.484 153 81 5 24 172 5 154 3.70e-30 117
Msa1235710 AT5G18270.1 33.981 206 114 8 20 216 19 211 5.80e-30 116
Msa1235710 AT1G34180.3 47.619 126 62 3 25 149 19 141 6.42e-30 117
Msa1235710 AT1G71930.2 38.922 167 88 6 12 173 5 162 8.83e-30 115
Msa1235710 AT1G71930.1 38.922 167 88 6 12 173 5 162 8.83e-30 115
Msa1235710 AT1G33280.1 44.295 149 76 5 25 169 11 156 9.54e-30 115
Msa1235710 AT1G34180.1 47.619 126 62 3 25 149 19 141 1.33e-29 118
Msa1235710 AT3G15170.1 40.909 154 80 5 25 170 23 173 1.71e-29 114
Msa1235710 AT4G10350.1 41.304 184 90 8 25 201 12 184 1.82e-29 115
Msa1235710 AT5G39610.1 39.873 158 82 6 20 169 18 170 1.83e-29 114
Msa1235710 AT2G02450.1 41.611 149 79 5 25 169 54 198 2.76e-29 115
Msa1235710 AT2G02450.2 41.611 149 79 5 25 169 54 198 2.87e-29 115
Msa1235710 AT3G04070.1 34.300 207 94 8 9 183 3 199 3.22e-29 114
Msa1235710 AT1G79580.3 42.767 159 79 6 15 169 16 166 4.04e-29 114
Msa1235710 AT1G79580.5 42.767 159 79 6 15 169 16 166 4.04e-29 114
Msa1235710 AT1G79580.4 42.767 159 79 6 15 169 16 166 4.04e-29 114
Msa1235710 AT1G79580.2 42.767 159 79 6 15 169 16 166 4.04e-29 114
Msa1235710 AT1G79580.1 42.767 159 79 6 15 169 16 166 4.04e-29 114
Msa1235710 AT1G12260.2 39.333 150 83 5 25 169 10 156 4.34e-29 114
Msa1235710 AT4G36160.1 37.705 183 95 7 13 185 7 180 4.74e-29 114
Msa1235710 AT4G36160.3 37.705 183 95 7 13 185 7 180 4.74e-29 114
Msa1235710 AT4G36160.2 37.705 183 95 7 13 185 11 184 5.28e-29 114
Msa1235710 AT3G15510.1 37.079 178 90 6 26 184 21 195 6.43e-29 114
Msa1235710 AT1G12260.1 39.333 150 83 5 25 169 10 156 6.89e-29 114
Msa1235710 AT2G18060.3 37.912 182 95 7 13 185 6 178 7.23e-29 114
Msa1235710 AT2G18060.1 37.912 182 95 7 13 185 6 178 7.23e-29 114
Msa1235710 AT1G77450.1 40.881 159 79 5 20 169 8 160 7.55e-29 111
Msa1235710 AT3G29035.1 42.466 146 72 6 5 149 13 147 8.24e-29 112
Msa1235710 AT3G04060.1 33.488 215 116 9 20 225 18 214 8.67e-29 113
Msa1235710 AT1G62700.1 40.667 150 81 5 25 169 10 156 1.24e-28 113
Msa1235710 AT1G62700.2 40.667 150 81 5 25 169 10 156 1.24e-28 113
Msa1235710 AT3G15500.1 39.394 165 75 7 15 169 13 162 2.15e-28 111
Msa1235710 AT4G27410.2 38.415 164 78 7 15 169 13 162 2.44e-28 110
Msa1235710 AT5G53950.1 44.444 126 66 3 25 149 20 142 3.74e-28 112
Msa1235710 AT5G22380.1 31.081 222 126 9 21 222 4 218 7.05e-28 108
Msa1235710 AT1G02220.1 42.759 145 78 4 24 167 5 145 9.05e-28 111
Msa1235710 AT3G04420.2 40.000 150 86 4 24 171 5 152 1.56e-27 108
Msa1235710 AT1G52890.1 37.297 185 91 7 15 189 13 182 1.83e-27 108
Msa1235710 AT3G04420.1 40.000 150 86 4 24 171 5 152 3.61e-27 108
Msa1235710 AT2G33480.2 41.558 154 76 7 25 173 18 162 5.81e-27 106
Msa1235710 AT5G13180.1 39.355 155 82 5 25 173 17 165 7.75e-27 105
Msa1235710 AT1G34180.4 43.478 138 62 4 25 149 19 153 1.09e-26 109
Msa1235710 AT1G01010.1 40.385 156 83 4 24 171 5 158 1.17e-26 108
Msa1235710 AT3G18400.1 35.976 164 89 6 12 170 1 153 1.20e-26 107
Msa1235710 AT2G43000.1 33.503 197 112 8 25 207 21 212 1.20e-26 105
Msa1235710 AT2G33480.1 40.127 157 76 7 25 173 18 164 1.37e-26 105
Msa1235710 AT1G56010.2 34.536 194 106 7 7 189 9 192 1.92e-26 106
Msa1235710 AT1G34180.2 43.478 138 62 4 25 149 19 153 2.02e-26 109
Msa1235710 AT4G27410.3 35.754 179 79 8 15 169 13 179 6.52e-26 104
Msa1235710 AT1G61110.1 38.788 165 75 7 25 169 19 177 8.11e-26 104
Msa1235710 AT2G46770.1 32.273 220 119 8 9 203 3 217 2.01e-25 104
Msa1235710 AT4G28530.1 34.637 179 92 6 10 171 4 174 2.82e-25 103
Msa1235710 AT3G61910.1 36.970 165 81 6 25 169 14 175 8.12e-25 102
Msa1235710 AT3G04430.1 44.030 134 61 4 28 150 6 136 2.07e-24 98.2
Msa1235710 AT3G12977.1 34.270 178 103 7 25 194 21 192 2.29e-24 100
Msa1235710 AT1G32870.1 41.558 154 77 6 25 170 13 161 4.16e-24 102
Msa1235710 AT1G32870.3 41.558 154 77 6 25 170 49 197 4.84e-24 102
Msa1235710 AT1G32870.2 41.558 154 77 6 25 170 13 161 5.13e-24 102
Msa1235710 AT3G44350.2 32.704 159 97 4 21 170 4 161 5.62e-24 98.2
Msa1235710 AT3G44350.1 35.606 132 81 3 21 149 4 134 2.73e-23 94.0
Msa1235710 AT1G52880.1 39.506 162 75 6 26 169 21 177 1.25e-22 95.9
Msa1235710 AT1G32770.1 35.802 162 84 6 25 169 19 177 1.56e-22 96.3
Msa1235710 AT5G61430.2 40.594 101 50 5 78 170 6 104 3.90e-17 80.1
Msa1235710 AT4G10350.2 37.956 137 69 6 71 201 11 137 6.53e-17 79.7
Msa1235710 AT3G12977.2 34.959 123 71 4 79 194 19 139 1.65e-16 77.4
Msa1235710 AT1G56010.1 33.884 121 68 4 79 189 7 125 8.99e-16 75.9
Msa1235710 AT5G64530.2 34.375 128 64 6 25 149 6 116 1.15e-15 73.6
Msa1235710 AT5G64530.1 34.375 128 64 6 25 149 6 116 1.25e-15 73.9
Msa1235710 AT4G28530.2 35.537 121 55 4 10 115 4 116 4.28e-14 72.0
Msa1235710 AT3G10490.4 42.500 80 37 3 97 169 1 78 2.31e-13 70.1
Msa1235710 AT3G10490.3 42.500 80 37 3 97 169 1 78 2.31e-13 70.1
Msa1235710 AT2G33480.3 37.500 104 53 5 78 173 8 107 3.70e-13 67.8
Msa1235710 AT3G55210.1 29.762 168 99 9 15 166 2 166 1.02e-11 64.7

Find 50 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAGGTACCAATAAAATTAT+TGG 0.218802 8_2:+13883986 Msa1235710:CDS
CTTAATGCTACGATCCTTTC+CGG 0.237779 8_2:-13883960 None:intergenic
TATTTGTTTCAGGTAATAAA+TGG 0.260005 8_2:+13885449 Msa1235710:intron
ATTGATTCCATATTTATATC+TGG 0.281669 8_2:-13885479 None:intergenic
ACAAGTATGCAAAGAGTAAA+AGG 0.285734 8_2:+13883900 Msa1235710:CDS
CAAAGAGTAAAAGGTTTAAA+AGG 0.296493 8_2:+13883909 Msa1235710:CDS
GAGGTACCAATAAAATTATT+GGG 0.345928 8_2:+13883987 Msa1235710:CDS
TACTTTGCCAGATATAAATA+TGG 0.355281 8_2:+13885472 Msa1235710:CDS
TTTAAAAGGAAAACTGATAA+GGG 0.381063 8_2:+13883923 Msa1235710:CDS
TTCTCAAACTCACAATTTCA+AGG 0.383262 8_2:+13885587 Msa1235710:CDS
TACCATGAAGATCCTGTTCC+TGG 0.391186 8_2:+13884028 Msa1235710:CDS
AAAAGAGGTTGTCATTTGTC+TGG 0.400238 8_2:-13883580 None:intergenic
GTTTAAAAGGAAAACTGATA+AGG 0.404991 8_2:+13883922 Msa1235710:CDS
TCCTCTTCAATGGTTTCAAA+AGG 0.405479 8_2:-13885647 None:intergenic
AGGGAAAGTATTTGTGTGCT+TGG 0.425738 8_2:-13885517 None:intergenic
GAAAATCAAGACACATTAGA+AGG 0.435447 8_2:+13885323 Msa1235710:CDS
TGAAGATTGTTGAGTAGAGA+AGG 0.435476 8_2:-13885537 None:intergenic
TTCCTGGTGTTAAGACCAAT+TGG 0.438457 8_2:+13884044 Msa1235710:CDS
GAGTTTGAGAAATATACTTC+CGG 0.444068 8_2:-13885575 None:intergenic
TCATCACATATCATTGTATC+CGG 0.462516 8_2:-13885266 None:intergenic
CACCAGGAACAGGATCTTCA+TGG 0.468840 8_2:-13884030 None:intergenic
GATCGTAGCATTAAGATTAG+AGG 0.479770 8_2:+13883968 Msa1235710:CDS
TATACAATGGTGTGTGATGA+AGG 0.485940 8_2:+13883549 None:intergenic
TAGAATCTGATGACCAAGAA+TGG 0.488434 8_2:+13883855 Msa1235710:CDS
ATACTCATGAATGATCCAAT+TGG 0.492502 8_2:-13884059 None:intergenic
TTGGTCTTAACACCAGGAAC+AGG 0.492759 8_2:-13884040 None:intergenic
AAGTATTTGTGTGCTTGGTA+AGG 0.493514 8_2:-13885512 None:intergenic
CAATTCGATGTTTGTTAACG+AGG 0.504710 8_2:+13885682 Msa1235710:CDS
GAAGATTGTTGAGTAGAGAA+GGG 0.509614 8_2:-13885536 None:intergenic
ATCAAGAGTTGGAGGAAAAG+AGG 0.512510 8_2:-13883595 None:intergenic
AAATATGGAATCAATATTTG+AGG 0.513860 8_2:+13885487 Msa1235710:CDS
AGCTATAACATTGTTTACAA+TGG 0.515348 8_2:-13883700 None:intergenic
TGCTACCTTTGATGATCACC+AGG 0.515840 8_2:+13884087 Msa1235710:CDS
GATACAATGATATGTGATGA+AGG 0.517905 8_2:+13885269 Msa1235710:CDS
TATGAACCTTGGGAGTTACC+AGG 0.523366 8_2:+13883741 Msa1235710:CDS
CCAAGAACAAAATCAAGAGT+TGG 0.536381 8_2:-13883606 None:intergenic
TGTATGCAATTATGAACCTT+GGG 0.538601 8_2:+13883731 Msa1235710:CDS
TTCAATCTATGAAAATGAGC+CGG 0.553611 8_2:+13885556 Msa1235710:CDS
ATGTATGCAATTATGAACCT+TGG 0.556333 8_2:+13883730 Msa1235710:CDS
ATACAATGATATGTGATGAA+GGG 0.563785 8_2:+13885270 Msa1235710:CDS
TTTGCATACTTGTATTCAAG+AGG 0.566911 8_2:-13883890 None:intergenic
TATTTACCTGGTAACTCCCA+AGG 0.567135 8_2:-13883747 None:intergenic
ACAAACCTGGTGATCATCAA+AGG 0.571764 8_2:-13884092 None:intergenic
TACAATGGTGTGTGATGAAG+GGG 0.571785 8_2:+13883551 None:intergenic
TACAATGATATGTGATGAAG+GGG 0.583689 8_2:+13885271 Msa1235710:CDS
ATCCAATTGGTCTTAACACC+AGG 0.586994 8_2:-13884046 None:intergenic
AGAACAAAATCAAGAGTTGG+AGG 0.587821 8_2:-13883603 None:intergenic
TTAACAAGCTCTTCATCTGT+AGG 0.590653 8_2:-13883642 None:intergenic
TTGCATACTTGTATTCAAGA+GGG 0.603000 8_2:-13883889 None:intergenic
ATACAATGGTGTGTGATGAA+GGG 0.616411 8_2:+13883550 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTTAAAATATTA+GGG - chr8_2:13885164-13885183 None:intergenic 0.0%
!!! ATTTTTTTTTTAAAATATTA+GGG - chr8_2:13885164-13885183 None:intergenic 0.0%
!! TTTATAAGAAAATAATGATA+GGG - chr8_2:13883784-13883803 None:intergenic 10.0%
!!! TTTTATAAGAAAATAATGAT+AGG - chr8_2:13883785-13883804 None:intergenic 10.0%
!!! TCATTATTTTCTTATAAAAA+TGG + chr8_2:13883786-13883805 Msa1235710:intron 10.0%
!! TTTATAAGAAAATAATGATA+GGG - chr8_2:13883784-13883803 None:intergenic 10.0%
!!! TTTTATAAGAAAATAATGAT+AGG - chr8_2:13883785-13883804 None:intergenic 10.0%
!!! TCATTATTTTCTTATAAAAA+TGG + chr8_2:13883786-13883805 Msa1235710:intron 10.0%
!!! ATTATTTTACAATATCTCAT+TGG - chr8_2:13885105-13885124 None:intergenic 15.0%
!! AGGAAATTAATATTAGTTAA+AGG - chr8_2:13885138-13885157 None:intergenic 15.0%
!!! AAATTTTGAAAACAAAGTTT+TGG + chr8_2:13885378-13885397 Msa1235710:intron 15.0%
!!! ATTATTTTACAATATCTCAT+TGG - chr8_2:13885105-13885124 None:intergenic 15.0%
!! AGGAAATTAATATTAGTTAA+AGG - chr8_2:13885138-13885157 None:intergenic 15.0%
!!! AAATTTTGAAAACAAAGTTT+TGG + chr8_2:13885378-13885397 Msa1235710:intron 15.0%
!! TACCTTAAAAATAAGATACT+TGG + chr8_2:13883669-13883688 Msa1235710:CDS 20.0%
!!! TACCAAGTATCTTATTTTTA+AGG - chr8_2:13883674-13883693 None:intergenic 20.0%
!! TTTAAAAGGAAAACTGATAA+GGG + chr8_2:13883923-13883942 Msa1235710:CDS 20.0%
!! TCATACAAATAAATACTAAG+AGG - chr8_2:13884189-13884208 None:intergenic 20.0%
!! ACAAAGAAAAATCGTAAAAA+TGG - chr8_2:13884321-13884340 None:intergenic 20.0%
!! AAATTTAACACATTTATTCG+TGG - chr8_2:13884441-13884460 None:intergenic 20.0%
!!! ATTAGCAATGTTAATTTTGA+TGG - chr8_2:13884485-13884504 None:intergenic 20.0%
!!! ATGTTTTTTCCTCAAAAAAT+AGG - chr8_2:13884598-13884617 None:intergenic 20.0%
!! AAAGAACAAATTAAAACATG+AGG - chr8_2:13884910-13884929 None:intergenic 20.0%
!! TAAATTCAAACTCTTAACAA+AGG - chr8_2:13885010-13885029 None:intergenic 20.0%
!!! TTTTTAAAATATTAGGGAAG+AGG - chr8_2:13885158-13885177 None:intergenic 20.0%
!!! TGTTTTCAAAATTTCTATCA+AGG - chr8_2:13885372-13885391 None:intergenic 20.0%
!!! ACTTGTTTTATATTTGTTTC+AGG + chr8_2:13885439-13885458 Msa1235710:intron 20.0%
!!! TATTTGTTTCAGGTAATAAA+TGG + chr8_2:13885449-13885468 Msa1235710:intron 20.0%
!!! ATTGATTCCATATTTATATC+TGG - chr8_2:13885482-13885501 None:intergenic 20.0%
!! AAATATGGAATCAATATTTG+AGG + chr8_2:13885487-13885506 Msa1235710:CDS 20.0%
!! TACCTTAAAAATAAGATACT+TGG + chr8_2:13883669-13883688 Msa1235710:CDS 20.0%
!!! TACCAAGTATCTTATTTTTA+AGG - chr8_2:13883674-13883693 None:intergenic 20.0%
!! TTTAAAAGGAAAACTGATAA+GGG + chr8_2:13883923-13883942 Msa1235710:CDS 20.0%
!! TCATACAAATAAATACTAAG+AGG - chr8_2:13884189-13884208 None:intergenic 20.0%
!! ACAAAGAAAAATCGTAAAAA+TGG - chr8_2:13884321-13884340 None:intergenic 20.0%
!! AAATTTAACACATTTATTCG+TGG - chr8_2:13884441-13884460 None:intergenic 20.0%
!!! ATTAGCAATGTTAATTTTGA+TGG - chr8_2:13884485-13884504 None:intergenic 20.0%
!!! ATGTTTTTTCCTCAAAAAAT+AGG - chr8_2:13884598-13884617 None:intergenic 20.0%
!! AAAGAACAAATTAAAACATG+AGG - chr8_2:13884910-13884929 None:intergenic 20.0%
!! TAAATTCAAACTCTTAACAA+AGG - chr8_2:13885010-13885029 None:intergenic 20.0%
!!! TTTTTAAAATATTAGGGAAG+AGG - chr8_2:13885158-13885177 None:intergenic 20.0%
!!! TGTTTTCAAAATTTCTATCA+AGG - chr8_2:13885372-13885391 None:intergenic 20.0%
!!! ACTTGTTTTATATTTGTTTC+AGG + chr8_2:13885439-13885458 Msa1235710:intron 20.0%
!!! TATTTGTTTCAGGTAATAAA+TGG + chr8_2:13885449-13885468 Msa1235710:intron 20.0%
!!! ATTGATTCCATATTTATATC+TGG - chr8_2:13885482-13885501 None:intergenic 20.0%
!! AAATATGGAATCAATATTTG+AGG + chr8_2:13885487-13885506 Msa1235710:CDS 20.0%
! AGCTATAACATTGTTTACAA+TGG - chr8_2:13883703-13883722 None:intergenic 25.0%
! GTTTGTTTGATATATTTACC+TGG - chr8_2:13883762-13883781 None:intergenic 25.0%
! CAAAGAGTAAAAGGTTTAAA+AGG + chr8_2:13883909-13883928 Msa1235710:CDS 25.0%
! GTTTAAAAGGAAAACTGATA+AGG + chr8_2:13883922-13883941 Msa1235710:CDS 25.0%
!!! AGAGGTACCAATAAAATTAT+TGG + chr8_2:13883986-13884005 Msa1235710:CDS 25.0%
!! GAGGTACCAATAAAATTATT+GGG + chr8_2:13883987-13884006 Msa1235710:CDS 25.0%
!! CTTAGTCCCAATAATTTTAT+TGG - chr8_2:13883996-13884015 None:intergenic 25.0%
!!! AATTTTGAGTATATTTGTCG+TGG + chr8_2:13884162-13884181 Msa1235710:intron 25.0%
! TATTAAACTAGTCCTATATC+AGG + chr8_2:13884230-13884249 Msa1235710:intron 25.0%
! CTACACTACTCAAAATTTAT+GGG - chr8_2:13884265-13884284 None:intergenic 25.0%
! TCTACACTACTCAAAATTTA+TGG - chr8_2:13884266-13884285 None:intergenic 25.0%
! TACTTCCTTCGTATAAAAAT+AGG + chr8_2:13884293-13884312 Msa1235710:intron 25.0%
! GACTGAAATGCATTTAATAA+TGG - chr8_2:13884407-13884426 None:intergenic 25.0%
! ATAACCGTGTAAAATTCAAA+AGG + chr8_2:13884515-13884534 Msa1235710:intron 25.0%
! TAACCGTGTAAAATTCAAAA+GGG + chr8_2:13884516-13884535 Msa1235710:intron 25.0%
!!! AAACGTAAACCTATTTTTTG+AGG + chr8_2:13884586-13884605 Msa1235710:intron 25.0%
! TGTACATCATAATTGTTATC+TGG + chr8_2:13884621-13884640 Msa1235710:intron 25.0%
! TGACTAAAAATCCATTCTTA+AGG - chr8_2:13884786-13884805 None:intergenic 25.0%
!!! TGTATTGTTTTTTATAGCGT+AGG + chr8_2:13884857-13884876 Msa1235710:intron 25.0%
! ACTCTTAACAAAGGTTATAT+GGG - chr8_2:13885001-13885020 None:intergenic 25.0%
! AACTCTTAACAAAGGTTATA+TGG - chr8_2:13885002-13885021 None:intergenic 25.0%
! AAGAGTTTGAATTTATAACC+TGG + chr8_2:13885015-13885034 Msa1235710:intron 25.0%
! ATACAATGATATGTGATGAA+GGG + chr8_2:13885270-13885289 Msa1235710:CDS 25.0%
! TACTTTGCCAGATATAAATA+TGG + chr8_2:13885472-13885491 Msa1235710:CDS 25.0%
!!! GAATTTATTTTCCTCTTCAA+TGG - chr8_2:13885660-13885679 None:intergenic 25.0%
! AGCTATAACATTGTTTACAA+TGG - chr8_2:13883703-13883722 None:intergenic 25.0%
! GTTTGTTTGATATATTTACC+TGG - chr8_2:13883762-13883781 None:intergenic 25.0%
! CAAAGAGTAAAAGGTTTAAA+AGG + chr8_2:13883909-13883928 Msa1235710:CDS 25.0%
! GTTTAAAAGGAAAACTGATA+AGG + chr8_2:13883922-13883941 Msa1235710:CDS 25.0%
!!! AGAGGTACCAATAAAATTAT+TGG + chr8_2:13883986-13884005 Msa1235710:CDS 25.0%
!! GAGGTACCAATAAAATTATT+GGG + chr8_2:13883987-13884006 Msa1235710:CDS 25.0%
!! CTTAGTCCCAATAATTTTAT+TGG - chr8_2:13883996-13884015 None:intergenic 25.0%
!!! AATTTTGAGTATATTTGTCG+TGG + chr8_2:13884162-13884181 Msa1235710:intron 25.0%
! TATTAAACTAGTCCTATATC+AGG + chr8_2:13884230-13884249 Msa1235710:intron 25.0%
! CTACACTACTCAAAATTTAT+GGG - chr8_2:13884265-13884284 None:intergenic 25.0%
! TCTACACTACTCAAAATTTA+TGG - chr8_2:13884266-13884285 None:intergenic 25.0%
! TACTTCCTTCGTATAAAAAT+AGG + chr8_2:13884293-13884312 Msa1235710:intron 25.0%
! GACTGAAATGCATTTAATAA+TGG - chr8_2:13884407-13884426 None:intergenic 25.0%
! ATAACCGTGTAAAATTCAAA+AGG + chr8_2:13884515-13884534 Msa1235710:intron 25.0%
! TAACCGTGTAAAATTCAAAA+GGG + chr8_2:13884516-13884535 Msa1235710:intron 25.0%
!!! AAACGTAAACCTATTTTTTG+AGG + chr8_2:13884586-13884605 Msa1235710:intron 25.0%
! TGTACATCATAATTGTTATC+TGG + chr8_2:13884621-13884640 Msa1235710:intron 25.0%
! TGACTAAAAATCCATTCTTA+AGG - chr8_2:13884786-13884805 None:intergenic 25.0%
!!! TGTATTGTTTTTTATAGCGT+AGG + chr8_2:13884857-13884876 Msa1235710:intron 25.0%
! ACTCTTAACAAAGGTTATAT+GGG - chr8_2:13885001-13885020 None:intergenic 25.0%
! AACTCTTAACAAAGGTTATA+TGG - chr8_2:13885002-13885021 None:intergenic 25.0%
! AAGAGTTTGAATTTATAACC+TGG + chr8_2:13885015-13885034 Msa1235710:intron 25.0%
! ATACAATGATATGTGATGAA+GGG + chr8_2:13885270-13885289 Msa1235710:CDS 25.0%
! TACTTTGCCAGATATAAATA+TGG + chr8_2:13885472-13885491 Msa1235710:CDS 25.0%
!!! GAATTTATTTTCCTCTTCAA+TGG - chr8_2:13885660-13885679 None:intergenic 25.0%
ATGTATGCAATTATGAACCT+TGG + chr8_2:13883730-13883749 Msa1235710:CDS 30.0%
TGTATGCAATTATGAACCTT+GGG + chr8_2:13883731-13883750 Msa1235710:CDS 30.0%
!!! TTCATCTTTTTCAGCTTGTT+CGG + chr8_2:13883829-13883848 Msa1235710:intron 30.0%
TTGCATACTTGTATTCAAGA+GGG - chr8_2:13883892-13883911 None:intergenic 30.0%
TTTGCATACTTGTATTCAAG+AGG - chr8_2:13883893-13883912 None:intergenic 30.0%
ACAAGTATGCAAAGAGTAAA+AGG + chr8_2:13883900-13883919 Msa1235710:CDS 30.0%
ATACTCATGAATGATCCAAT+TGG - chr8_2:13884062-13884081 None:intergenic 30.0%
TACTGTAAACATAACAAACC+TGG - chr8_2:13884108-13884127 None:intergenic 30.0%
!! GGTTTGTTATGTTTACAGTA+AGG + chr8_2:13884108-13884127 Msa1235710:intron 30.0%
! TGTCCCTTTTGAATTTTACA+CGG - chr8_2:13884522-13884541 None:intergenic 30.0%
ATTCTTAAGGTGAATAAGTG+AGG - chr8_2:13884773-13884792 None:intergenic 30.0%
TCACTTATTCACCTTAAGAA+TGG + chr8_2:13884772-13884791 Msa1235710:intron 30.0%
GAACAAATTAAAACATGAGG+AGG - chr8_2:13884907-13884926 None:intergenic 30.0%
TTGAATTTGAACTTTCATCC+AGG - chr8_2:13885036-13885055 None:intergenic 30.0%
! TCATCATCCAAATTTTGTAG+AGG + chr8_2:13885189-13885208 Msa1235710:intron 30.0%
CAAAAGTCCTCTACAAAATT+TGG - chr8_2:13885199-13885218 None:intergenic 30.0%
! AGAGGACTTTTGTATTATGT+CGG + chr8_2:13885207-13885226 Msa1235710:intron 30.0%
AGCTGAGAAAAATATTGAAG+CGG + chr8_2:13885241-13885260 Msa1235710:CDS 30.0%
TCATCACATATCATTGTATC+CGG - chr8_2:13885269-13885288 None:intergenic 30.0%
GATACAATGATATGTGATGA+AGG + chr8_2:13885269-13885288 Msa1235710:CDS 30.0%
TACAATGATATGTGATGAAG+GGG + chr8_2:13885271-13885290 Msa1235710:CDS 30.0%
GAAAATCAAGACACATTAGA+AGG + chr8_2:13885323-13885342 Msa1235710:CDS 30.0%
TTCAATCTATGAAAATGAGC+CGG + chr8_2:13885556-13885575 Msa1235710:CDS 30.0%
GAGTTTGAGAAATATACTTC+CGG - chr8_2:13885578-13885597 None:intergenic 30.0%
TTCTCAAACTCACAATTTCA+AGG + chr8_2:13885587-13885606 Msa1235710:CDS 30.0%
ATGTATGCAATTATGAACCT+TGG + chr8_2:13883730-13883749 Msa1235710:CDS 30.0%
TGTATGCAATTATGAACCTT+GGG + chr8_2:13883731-13883750 Msa1235710:CDS 30.0%
!!! TTCATCTTTTTCAGCTTGTT+CGG + chr8_2:13883829-13883848 Msa1235710:intron 30.0%
TTGCATACTTGTATTCAAGA+GGG - chr8_2:13883892-13883911 None:intergenic 30.0%
TTTGCATACTTGTATTCAAG+AGG - chr8_2:13883893-13883912 None:intergenic 30.0%
ACAAGTATGCAAAGAGTAAA+AGG + chr8_2:13883900-13883919 Msa1235710:CDS 30.0%
ATACTCATGAATGATCCAAT+TGG - chr8_2:13884062-13884081 None:intergenic 30.0%
TACTGTAAACATAACAAACC+TGG - chr8_2:13884108-13884127 None:intergenic 30.0%
!! GGTTTGTTATGTTTACAGTA+AGG + chr8_2:13884108-13884127 Msa1235710:intron 30.0%
! TGTCCCTTTTGAATTTTACA+CGG - chr8_2:13884522-13884541 None:intergenic 30.0%
ATTCTTAAGGTGAATAAGTG+AGG - chr8_2:13884773-13884792 None:intergenic 30.0%
TCACTTATTCACCTTAAGAA+TGG + chr8_2:13884772-13884791 Msa1235710:intron 30.0%
GAACAAATTAAAACATGAGG+AGG - chr8_2:13884907-13884926 None:intergenic 30.0%
TTGAATTTGAACTTTCATCC+AGG - chr8_2:13885036-13885055 None:intergenic 30.0%
! TCATCATCCAAATTTTGTAG+AGG + chr8_2:13885189-13885208 Msa1235710:intron 30.0%
CAAAAGTCCTCTACAAAATT+TGG - chr8_2:13885199-13885218 None:intergenic 30.0%
! AGAGGACTTTTGTATTATGT+CGG + chr8_2:13885207-13885226 Msa1235710:intron 30.0%
AGCTGAGAAAAATATTGAAG+CGG + chr8_2:13885241-13885260 Msa1235710:CDS 30.0%
TCATCACATATCATTGTATC+CGG - chr8_2:13885269-13885288 None:intergenic 30.0%
GATACAATGATATGTGATGA+AGG + chr8_2:13885269-13885288 Msa1235710:CDS 30.0%
TACAATGATATGTGATGAAG+GGG + chr8_2:13885271-13885290 Msa1235710:CDS 30.0%
GAAAATCAAGACACATTAGA+AGG + chr8_2:13885323-13885342 Msa1235710:CDS 30.0%
TTCAATCTATGAAAATGAGC+CGG + chr8_2:13885556-13885575 Msa1235710:CDS 30.0%
GAGTTTGAGAAATATACTTC+CGG - chr8_2:13885578-13885597 None:intergenic 30.0%
TTCTCAAACTCACAATTTCA+AGG + chr8_2:13885587-13885606 Msa1235710:CDS 30.0%
! AAAAGAGGTTGTCATTTGTC+TGG - chr8_2:13883583-13883602 None:intergenic 35.0%
AGAACAAAATCAAGAGTTGG+AGG - chr8_2:13883606-13883625 None:intergenic 35.0%
CCAAGAACAAAATCAAGAGT+TGG - chr8_2:13883609-13883628 None:intergenic 35.0%
! CCAACTCTTGATTTTGTTCT+TGG + chr8_2:13883606-13883625 Msa1235710:CDS 35.0%
TTAACAAGCTCTTCATCTGT+AGG - chr8_2:13883645-13883664 None:intergenic 35.0%
TAGAATCTGATGACCAAGAA+TGG + chr8_2:13883855-13883874 Msa1235710:CDS 35.0%
! GGAAAACTGATAAGGGTTTT+TGG + chr8_2:13883930-13883949 Msa1235710:CDS 35.0%
GATCGTAGCATTAAGATTAG+AGG + chr8_2:13883968-13883987 Msa1235710:CDS 35.0%
!!! TGGCACCTATTTTTATACGA+AGG - chr8_2:13884301-13884320 None:intergenic 35.0%
!!! AAGGGACACTTATTTTGAGA+CGG + chr8_2:13884534-13884553 Msa1235710:intron 35.0%
! CTATAAAAGTATATCGTCCC+CGG + chr8_2:13884698-13884717 Msa1235710:intron 35.0%
AGGGACATATGTGATATACA+AGG + chr8_2:13884726-13884745 Msa1235710:intron 35.0%
GGGACATATGTGATATACAA+GGG + chr8_2:13884727-13884746 Msa1235710:intron 35.0%
AACAAAGGTTATATGGGACA+GGG - chr8_2:13884995-13885014 None:intergenic 35.0%
TAACAAAGGTTATATGGGAC+AGG - chr8_2:13884996-13885015 None:intergenic 35.0%
GAAAAATATTGAAGCGGAAC+CGG + chr8_2:13885247-13885266 Msa1235710:CDS 35.0%
AAGTATTTGTGTGCTTGGTA+AGG - chr8_2:13885515-13885534 None:intergenic 35.0%
GAAGATTGTTGAGTAGAGAA+GGG - chr8_2:13885539-13885558 None:intergenic 35.0%
TGAAGATTGTTGAGTAGAGA+AGG - chr8_2:13885540-13885559 None:intergenic 35.0%
!!! TCCTTTTGAAACCATTGAAG+AGG + chr8_2:13885646-13885665 Msa1235710:CDS 35.0%
TCCTCTTCAATGGTTTCAAA+AGG - chr8_2:13885650-13885669 None:intergenic 35.0%
! CAATTCGATGTTTGTTAACG+AGG + chr8_2:13885682-13885701 Msa1235710:CDS 35.0%
! AAAAGAGGTTGTCATTTGTC+TGG - chr8_2:13883583-13883602 None:intergenic 35.0%
AGAACAAAATCAAGAGTTGG+AGG - chr8_2:13883606-13883625 None:intergenic 35.0%
CCAAGAACAAAATCAAGAGT+TGG - chr8_2:13883609-13883628 None:intergenic 35.0%
! CCAACTCTTGATTTTGTTCT+TGG + chr8_2:13883606-13883625 Msa1235710:CDS 35.0%
TTAACAAGCTCTTCATCTGT+AGG - chr8_2:13883645-13883664 None:intergenic 35.0%
TAGAATCTGATGACCAAGAA+TGG + chr8_2:13883855-13883874 Msa1235710:CDS 35.0%
! GGAAAACTGATAAGGGTTTT+TGG + chr8_2:13883930-13883949 Msa1235710:CDS 35.0%
GATCGTAGCATTAAGATTAG+AGG + chr8_2:13883968-13883987 Msa1235710:CDS 35.0%
!!! TGGCACCTATTTTTATACGA+AGG - chr8_2:13884301-13884320 None:intergenic 35.0%
!!! AAGGGACACTTATTTTGAGA+CGG + chr8_2:13884534-13884553 Msa1235710:intron 35.0%
! CTATAAAAGTATATCGTCCC+CGG + chr8_2:13884698-13884717 Msa1235710:intron 35.0%
AGGGACATATGTGATATACA+AGG + chr8_2:13884726-13884745 Msa1235710:intron 35.0%
GGGACATATGTGATATACAA+GGG + chr8_2:13884727-13884746 Msa1235710:intron 35.0%
AACAAAGGTTATATGGGACA+GGG - chr8_2:13884995-13885014 None:intergenic 35.0%
TAACAAAGGTTATATGGGAC+AGG - chr8_2:13884996-13885015 None:intergenic 35.0%
GAAAAATATTGAAGCGGAAC+CGG + chr8_2:13885247-13885266 Msa1235710:CDS 35.0%
AAGTATTTGTGTGCTTGGTA+AGG - chr8_2:13885515-13885534 None:intergenic 35.0%
GAAGATTGTTGAGTAGAGAA+GGG - chr8_2:13885539-13885558 None:intergenic 35.0%
TGAAGATTGTTGAGTAGAGA+AGG - chr8_2:13885540-13885559 None:intergenic 35.0%
!!! TCCTTTTGAAACCATTGAAG+AGG + chr8_2:13885646-13885665 Msa1235710:CDS 35.0%
TCCTCTTCAATGGTTTCAAA+AGG - chr8_2:13885650-13885669 None:intergenic 35.0%
! CAATTCGATGTTTGTTAACG+AGG + chr8_2:13885682-13885701 Msa1235710:CDS 35.0%
ATCAAGAGTTGGAGGAAAAG+AGG - chr8_2:13883598-13883617 None:intergenic 40.0%
TATTTACCTGGTAACTCCCA+AGG - chr8_2:13883750-13883769 None:intergenic 40.0%
GGCACAAGAAAAACCATTCT+TGG - chr8_2:13883871-13883890 None:intergenic 40.0%
!! AAGGGTTTTTGGAAAGCTAC+CGG + chr8_2:13883941-13883960 Msa1235710:CDS 40.0%
!! TTTTTGGAAAGCTACCGGAA+AGG + chr8_2:13883946-13883965 Msa1235710:CDS 40.0%
CTTAATGCTACGATCCTTTC+CGG - chr8_2:13883963-13883982 None:intergenic 40.0%
! TTCCTGGTGTTAAGACCAAT+TGG + chr8_2:13884044-13884063 Msa1235710:CDS 40.0%
!! ATCCAATTGGTCTTAACACC+AGG - chr8_2:13884049-13884068 None:intergenic 40.0%
ACAAACCTGGTGATCATCAA+AGG - chr8_2:13884095-13884114 None:intergenic 40.0%
AATAAGTGAGGAATCAGGGT+TGG - chr8_2:13884761-13884780 None:intergenic 40.0%
GGTGAATAAGTGAGGAATCA+GGG - chr8_2:13884765-13884784 None:intergenic 40.0%
AGGTGAATAAGTGAGGAATC+AGG - chr8_2:13884766-13884785 None:intergenic 40.0%
!! AGGGAAAGTATTTGTGTGCT+TGG - chr8_2:13885520-13885539 None:intergenic 40.0%
ATCAAGAGTTGGAGGAAAAG+AGG - chr8_2:13883598-13883617 None:intergenic 40.0%
TATTTACCTGGTAACTCCCA+AGG - chr8_2:13883750-13883769 None:intergenic 40.0%
GGCACAAGAAAAACCATTCT+TGG - chr8_2:13883871-13883890 None:intergenic 40.0%
!! AAGGGTTTTTGGAAAGCTAC+CGG + chr8_2:13883941-13883960 Msa1235710:CDS 40.0%
!! TTTTTGGAAAGCTACCGGAA+AGG + chr8_2:13883946-13883965 Msa1235710:CDS 40.0%
CTTAATGCTACGATCCTTTC+CGG - chr8_2:13883963-13883982 None:intergenic 40.0%
! TTCCTGGTGTTAAGACCAAT+TGG + chr8_2:13884044-13884063 Msa1235710:CDS 40.0%
!! ATCCAATTGGTCTTAACACC+AGG - chr8_2:13884049-13884068 None:intergenic 40.0%
ACAAACCTGGTGATCATCAA+AGG - chr8_2:13884095-13884114 None:intergenic 40.0%
AATAAGTGAGGAATCAGGGT+TGG - chr8_2:13884761-13884780 None:intergenic 40.0%
GGTGAATAAGTGAGGAATCA+GGG - chr8_2:13884765-13884784 None:intergenic 40.0%
AGGTGAATAAGTGAGGAATC+AGG - chr8_2:13884766-13884785 None:intergenic 40.0%
!! AGGGAAAGTATTTGTGTGCT+TGG - chr8_2:13885520-13885539 None:intergenic 40.0%
TATGAACCTTGGGAGTTACC+AGG + chr8_2:13883741-13883760 Msa1235710:CDS 45.0%
TACCATGAAGATCCTGTTCC+TGG + chr8_2:13884028-13884047 Msa1235710:CDS 45.0%
!! TTGGTCTTAACACCAGGAAC+AGG - chr8_2:13884043-13884062 None:intergenic 45.0%
! TGCTACCTTTGATGATCACC+AGG + chr8_2:13884087-13884106 Msa1235710:CDS 45.0%
! AAAAGTATATCGTCCCCGGT+TGG + chr8_2:13884702-13884721 Msa1235710:intron 45.0%
TCACATATGTCCCTACCAAC+CGG - chr8_2:13884720-13884739 None:intergenic 45.0%
AAGGTTATATGGGACAGGGA+CGG - chr8_2:13884991-13885010 None:intergenic 45.0%
TATGAACCTTGGGAGTTACC+AGG + chr8_2:13883741-13883760 Msa1235710:CDS 45.0%
TACCATGAAGATCCTGTTCC+TGG + chr8_2:13884028-13884047 Msa1235710:CDS 45.0%
!! TTGGTCTTAACACCAGGAAC+AGG - chr8_2:13884043-13884062 None:intergenic 45.0%
! TGCTACCTTTGATGATCACC+AGG + chr8_2:13884087-13884106 Msa1235710:CDS 45.0%
! AAAAGTATATCGTCCCCGGT+TGG + chr8_2:13884702-13884721 Msa1235710:intron 45.0%
TCACATATGTCCCTACCAAC+CGG - chr8_2:13884720-13884739 None:intergenic 45.0%
AAGGTTATATGGGACAGGGA+CGG - chr8_2:13884991-13885010 None:intergenic 45.0%
!!! CATTTTTTTTTTAAAATATT+AGG - chr8_2:13885165-13885184 None:intergenic 5.0%
!!! CATTTTTTTTTTAAAATATT+AGG - chr8_2:13885165-13885184 None:intergenic 5.0%
CACCAGGAACAGGATCTTCA+TGG - chr8_2:13884033-13884052 None:intergenic 50.0%
! TATATCGTCCCCGGTTGGTA+GGG + chr8_2:13884707-13884726 Msa1235710:intron 50.0%
ACATATGTCCCTACCAACCG+GGG - chr8_2:13884718-13884737 None:intergenic 50.0%
CACATATGTCCCTACCAACC+GGG - chr8_2:13884719-13884738 None:intergenic 50.0%
AGGAATCAGGGTTGGAACTC+TGG - chr8_2:13884753-13884772 None:intergenic 50.0%
CACCAGGAACAGGATCTTCA+TGG - chr8_2:13884033-13884052 None:intergenic 50.0%
! TATATCGTCCCCGGTTGGTA+GGG + chr8_2:13884707-13884726 Msa1235710:intron 50.0%
ACATATGTCCCTACCAACCG+GGG - chr8_2:13884718-13884737 None:intergenic 50.0%
CACATATGTCCCTACCAACC+GGG - chr8_2:13884719-13884738 None:intergenic 50.0%
AGGAATCAGGGTTGGAACTC+TGG - chr8_2:13884753-13884772 None:intergenic 50.0%
GGGTTCGTCGCTCCTGATAT+AGG - chr8_2:13884245-13884264 None:intergenic 55.0%
GTATATCGTCCCCGGTTGGT+AGG + chr8_2:13884706-13884725 Msa1235710:intron 55.0%
GGGTTCGTCGCTCCTGATAT+AGG - chr8_2:13884245-13884264 None:intergenic 55.0%
GTATATCGTCCCCGGTTGGT+AGG + chr8_2:13884706-13884725 Msa1235710:intron 55.0%
! CTCCACGTTGGTGGGTGTGT+GGG - chr8_2:13884968-13884987 None:intergenic 60.0%
! CTCCACGTTGGTGGGTGTGT+GGG - chr8_2:13884968-13884987 None:intergenic 60.0%
AGCCCACACACCCACCAACG+TGG + chr8_2:13884963-13884982 Msa1235710:intron 65.0%
! GCTCCACGTTGGTGGGTGTG+TGG - chr8_2:13884969-13884988 None:intergenic 65.0%
AGGGACGGCTCCACGTTGGT+GGG - chr8_2:13884976-13884995 None:intergenic 65.0%
AGCCCACACACCCACCAACG+TGG + chr8_2:13884963-13884982 Msa1235710:intron 65.0%
! GCTCCACGTTGGTGGGTGTG+TGG - chr8_2:13884969-13884988 None:intergenic 65.0%
AGGGACGGCTCCACGTTGGT+GGG - chr8_2:13884976-13884995 None:intergenic 65.0%
CAGGGACGGCTCCACGTTGG+TGG - chr8_2:13884977-13884996 None:intergenic 70.0%
GGACAGGGACGGCTCCACGT+TGG - chr8_2:13884980-13884999 None:intergenic 70.0%
CAGGGACGGCTCCACGTTGG+TGG - chr8_2:13884977-13884996 None:intergenic 70.0%
GGACAGGGACGGCTCCACGT+TGG - chr8_2:13884980-13884999 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 13883555 13885739 13883555 ID=Msa1235710;Name=Msa1235710
chr8_2 mRNA 13883555 13885739 13883555 ID=Msa1235710-mRNA-1;Parent=Msa1235710;Name=Msa1235710-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.33|0|1|1|1|4|0|299
chr8_2 exon 13883555 13883762 13883555 ID=Msa1235710-mRNA-1:exon:5324;Parent=Msa1235710-mRNA-1
chr8_2 exon 13883843 13884108 13883843 ID=Msa1235710-mRNA-1:exon:5325;Parent=Msa1235710-mRNA-1
chr8_2 exon 13885209 13885355 13885209 ID=Msa1235710-mRNA-1:exon:5326;Parent=Msa1235710-mRNA-1
chr8_2 exon 13885461 13885739 13885461 ID=Msa1235710-mRNA-1:exon:5327;Parent=Msa1235710-mRNA-1
chr8_2 CDS 13883555 13883762 13883555 ID=Msa1235710-mRNA-1:cds;Parent=Msa1235710-mRNA-1
chr8_2 CDS 13883843 13884108 13883843 ID=Msa1235710-mRNA-1:cds;Parent=Msa1235710-mRNA-1
chr8_2 CDS 13885209 13885355 13885209 ID=Msa1235710-mRNA-1:cds;Parent=Msa1235710-mRNA-1
chr8_2 CDS 13885461 13885739 13885461 ID=Msa1235710-mRNA-1:cds;Parent=Msa1235710-mRNA-1
Gene Sequence

>Msa1235710

ATGGTGTGTGATGAAGGGGAGTCTTCCAGACAAATGACAACCTCTTTTCCTCCAACTCTTGATTTTGTTCTTGGACTTAGATTCTGTCCTACAGATGAAGAGCTTGTTAAGTACTACCTTAAAAATAAGATACTTGGTAATGATTCCATTGTAAACAATGTTATAGCTGAAGTTGATGTATGCAATTATGAACCTTGGGAGTTACCAGCTTGTTCGGTTATAGAATCTGATGACCAAGAATGGTTTTTCTTGTGCCCTCTTGAATACAAGTATGCAAAGAGTAAAAGGTTTAAAAGGAAAACTGATAAGGGTTTTTGGAAAGCTACCGGAAAGGATCGTAGCATTAAGATTAGAGGTACCAATAAAATTATTGGGACTAAGAAGACTCTTGTTTACCATGAAGATCCTGTTCCTGGTGTTAAGACCAATTGGATCATTCATGAGTATCATGATGCTACCTTTGATGATCACCAGAGGACTTTTGTATTATGTCGGTTGATGAAGAAAGCTGAGAAAAATATTGAAGCGGAACCGGATACAATGATATGTGATGAAGGGGAGTCGAGTAGACACATGAGTTCTGACTACGAAAATCAAGACACATTAGAAGGAATTTCAAATGTAATAAATGGTACTTTGCCAGATATAAATATGGAATCAATATTTGAGGAACCTTACCAAGCACACAAATACTTTCCCTTCTCTACTCAACAATCTTCAATCTATGAAAATGAGCCGGAAGTATATTTCTCAAACTCACAATTTCAAGGTGCTTATTTTAGAAATGAAGATGTTGTTATTCAGAGTCCTTTTGAAACCATTGAAGAGGAAAATAAATTCGTCAATTCGATGTTTGTTAACGAGGATTTTATTAATAGTGAAAACAGAAGACAATCATAA
Protein sequence

>Msa1235710

MVCDEGESSRQMTTSFPPTLDFVLGLRFCPTDEELVKYYLKNKILGNDSIVNNVIAEVDVCNYEPWELPACSVIESDDQEWFFLCPLEYKYAKSKRFKRKTDKGFWKATGKDRSIKIRGTNKIIGTKKTLVYHEDPVPGVKTNWIIHEYHDATFDDHQRTFVLCRLMKKAEKNIEAEPDTMICDEGESSRHMSSDYENQDTLEGISNVINGTLPDINMESIFEEPYQAHKYFPFSTQQSSIYENEPEVYFSNSQFQGAYFRNEDVVIQSPFETIEEENKFVNSMFVNEDFINSENRRQS*