Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1235730 | KYP75561.1 | 57.971 | 138 | 55 | 2 | 1 | 135 | 1 | 138 | 4.58e-46 | 162 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1235730 | sp|Q9SCK6|NAC62_ARATH | 42.405 | 158 | 85 | 3 | 1 | 153 | 13 | 169 | 5.84e-36 | 132 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1235730 | A0A151U8J7 | 57.971 | 138 | 55 | 2 | 1 | 135 | 1 | 138 | 2.19e-46 | 162 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1235730 | TF | NAC |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1235730 | MtrunA17_Chr8g0345701 | 59.310 | 145 | 41 | 3 | 1 | 130 | 7 | 148 | 2.18e-49 | 156 |
| Msa1235730 | MtrunA17_Chr8g0345691 | 53.846 | 130 | 58 | 2 | 1 | 129 | 12 | 140 | 1.90e-40 | 140 |
| Msa1235730 | MtrunA17_Chr8g0345671 | 52.672 | 131 | 60 | 2 | 1 | 130 | 11 | 140 | 9.13e-40 | 138 |
| Msa1235730 | MtrunA17_Chr8g0345711 | 49.242 | 132 | 65 | 2 | 1 | 131 | 12 | 142 | 8.98e-39 | 129 |
| Msa1235730 | MtrunA17_Chr8g0345731 | 51.515 | 132 | 61 | 2 | 1 | 129 | 24 | 155 | 1.12e-38 | 129 |
| Msa1235730 | MtrunA17_Chr5g0428991 | 46.154 | 143 | 69 | 2 | 1 | 143 | 25 | 159 | 5.86e-36 | 130 |
| Msa1235730 | MtrunA17_Chr3g0128151 | 44.755 | 143 | 71 | 3 | 1 | 143 | 22 | 156 | 4.25e-33 | 122 |
| Msa1235730 | MtrunA17_Chr3g0128111 | 42.282 | 149 | 79 | 4 | 4 | 147 | 45 | 191 | 2.96e-32 | 115 |
| Msa1235730 | MtrunA17_Chr2g0316971 | 43.750 | 128 | 70 | 1 | 1 | 128 | 23 | 148 | 7.03e-32 | 117 |
| Msa1235730 | MtrunA17_Chr1g0197361 | 41.985 | 131 | 73 | 2 | 4 | 133 | 11 | 139 | 8.89e-32 | 119 |
| Msa1235730 | MtrunA17_Chr2g0309891 | 41.549 | 142 | 80 | 2 | 1 | 141 | 6 | 145 | 5.76e-31 | 114 |
| Msa1235730 | MtrunA17_Chr5g0433781 | 42.969 | 128 | 71 | 1 | 1 | 128 | 6 | 131 | 2.15e-30 | 115 |
| Msa1235730 | MtrunA17_Chr3g0139331 | 42.969 | 128 | 71 | 1 | 1 | 128 | 11 | 136 | 2.42e-30 | 112 |
| Msa1235730 | MtrunA17_Chr8g0345721 | 39.623 | 159 | 65 | 3 | 3 | 131 | 37 | 194 | 3.11e-30 | 108 |
| Msa1235730 | MtrunA17_Chr8g0345741 | 47.899 | 119 | 60 | 2 | 12 | 129 | 2 | 119 | 6.72e-30 | 106 |
| Msa1235730 | MtrunA17_Chr3g0092671 | 40.458 | 131 | 75 | 2 | 4 | 133 | 8 | 136 | 9.00e-30 | 113 |
| Msa1235730 | MtrunA17_Chr6g0481091 | 41.353 | 133 | 76 | 1 | 1 | 133 | 6 | 136 | 1.37e-29 | 107 |
| Msa1235730 | MtrunA17_Chr1g0147421 | 38.889 | 162 | 85 | 5 | 1 | 154 | 27 | 182 | 2.85e-29 | 109 |
| Msa1235730 | MtrunA17_Chr1g0183741 | 39.844 | 128 | 75 | 1 | 1 | 128 | 10 | 135 | 4.86e-29 | 107 |
| Msa1235730 | MtrunA17_Chr3g0144271 | 41.538 | 130 | 71 | 3 | 1 | 128 | 23 | 149 | 6.39e-29 | 109 |
| Msa1235730 | MtrunA17_Chr7g0261411 | 39.844 | 128 | 75 | 1 | 1 | 128 | 10 | 135 | 1.00e-28 | 107 |
| Msa1235730 | MtrunA17_Chr3g0109821 | 39.189 | 148 | 84 | 2 | 1 | 144 | 6 | 151 | 1.05e-28 | 110 |
| Msa1235730 | MtrunA17_Chr5g0400461 | 37.333 | 150 | 89 | 1 | 1 | 145 | 6 | 155 | 1.12e-28 | 107 |
| Msa1235730 | MtrunA17_Chr4g0054791 | 40.876 | 137 | 64 | 3 | 1 | 128 | 6 | 134 | 3.67e-28 | 105 |
| Msa1235730 | MtrunA17_Chr6g0461661 | 39.844 | 128 | 75 | 1 | 1 | 128 | 18 | 143 | 1.03e-27 | 105 |
| Msa1235730 | MtrunA17_Chr6g0453451 | 42.188 | 128 | 70 | 2 | 1 | 128 | 20 | 143 | 1.86e-27 | 104 |
| Msa1235730 | MtrunA17_Chr7g0253011 | 41.538 | 130 | 72 | 2 | 1 | 128 | 17 | 144 | 2.18e-27 | 105 |
| Msa1235730 | MtrunA17_Chr7g0217711 | 44.800 | 125 | 65 | 3 | 4 | 128 | 22 | 142 | 3.75e-27 | 100 |
| Msa1235730 | MtrunA17_Chr2g0318101 | 42.222 | 135 | 75 | 2 | 1 | 134 | 15 | 147 | 4.67e-27 | 103 |
| Msa1235730 | MtrunA17_Chr6g0484441 | 40.602 | 133 | 75 | 2 | 1 | 133 | 5 | 133 | 5.51e-27 | 103 |
| Msa1235730 | MtrunA17_Chr4g0047841 | 41.985 | 131 | 74 | 1 | 1 | 131 | 15 | 143 | 1.19e-26 | 102 |
| Msa1235730 | MtrunA17_Chr4g0060931 | 42.188 | 128 | 70 | 3 | 1 | 128 | 17 | 140 | 1.51e-26 | 102 |
| Msa1235730 | MtrunA17_Chr4g0056541 | 39.535 | 129 | 75 | 2 | 1 | 128 | 7 | 133 | 1.68e-26 | 102 |
| Msa1235730 | MtrunA17_Chr8g0385991 | 37.879 | 132 | 78 | 1 | 1 | 132 | 14 | 141 | 1.85e-26 | 99.8 |
| Msa1235730 | MtrunA17_Chr4g0018391 | 37.984 | 129 | 77 | 2 | 1 | 128 | 7 | 133 | 1.93e-26 | 102 |
| Msa1235730 | MtrunA17_Chr3g0130101 | 39.231 | 130 | 77 | 1 | 4 | 133 | 10 | 137 | 2.10e-26 | 102 |
| Msa1235730 | MtrunA17_Chr7g0214071 | 40.625 | 128 | 71 | 1 | 1 | 128 | 15 | 137 | 2.38e-26 | 100 |
| Msa1235730 | MtrunA17_Chr7g0217721 | 44.800 | 125 | 65 | 3 | 4 | 128 | 22 | 142 | 2.47e-26 | 101 |
| Msa1235730 | MtrunA17_Chr3g0091921 | 42.188 | 128 | 70 | 3 | 1 | 128 | 16 | 139 | 6.23e-26 | 99.8 |
| Msa1235730 | MtrunA17_Chr1g0201021 | 41.406 | 128 | 72 | 2 | 1 | 128 | 20 | 144 | 1.57e-25 | 101 |
| Msa1235730 | MtrunA17_Chr2g0312321 | 40.625 | 128 | 70 | 3 | 1 | 128 | 11 | 132 | 1.63e-25 | 99.0 |
| Msa1235730 | MtrunA17_Chr4g0017921 | 39.535 | 129 | 75 | 2 | 1 | 128 | 8 | 134 | 1.71e-25 | 99.4 |
| Msa1235730 | MtrunA17_Chr5g0398971 | 39.535 | 129 | 76 | 2 | 1 | 128 | 7 | 134 | 1.88e-25 | 99.4 |
| Msa1235730 | MtrunA17_Chr8g0384201 | 34.615 | 130 | 83 | 1 | 4 | 133 | 9 | 136 | 2.30e-25 | 100 |
| Msa1235730 | MtrunA17_Chr3g0124761 | 40.625 | 128 | 71 | 2 | 1 | 128 | 7 | 129 | 8.81e-25 | 96.7 |
| Msa1235730 | MtrunA17_Chr3g0130731 | 40.909 | 132 | 73 | 2 | 1 | 132 | 7 | 133 | 1.12e-24 | 96.3 |
| Msa1235730 | MtrunA17_Chr1g0197351 | 40.800 | 125 | 72 | 1 | 4 | 128 | 45 | 167 | 1.13e-24 | 98.6 |
| Msa1235730 | MtrunA17_Chr7g0252971 | 37.063 | 143 | 81 | 2 | 1 | 136 | 8 | 148 | 1.98e-24 | 96.7 |
| Msa1235730 | MtrunA17_Chr8g0372121 | 36.434 | 129 | 79 | 2 | 1 | 128 | 6 | 132 | 2.79e-24 | 95.5 |
| Msa1235730 | MtrunA17_Chr1g0200561 | 37.984 | 129 | 77 | 2 | 1 | 128 | 19 | 145 | 2.93e-24 | 96.3 |
| Msa1235730 | MtrunA17_Chr7g0263931 | 39.844 | 128 | 75 | 1 | 1 | 128 | 11 | 136 | 3.09e-24 | 95.9 |
| Msa1235730 | MtrunA17_Chr2g0309331 | 37.984 | 129 | 78 | 2 | 1 | 128 | 10 | 137 | 3.21e-24 | 95.9 |
| Msa1235730 | MtrunA17_Chr5g0405211 | 36.154 | 130 | 80 | 2 | 1 | 129 | 8 | 135 | 3.80e-24 | 95.9 |
| Msa1235730 | MtrunA17_Chr4g0042561 | 38.519 | 135 | 79 | 2 | 1 | 135 | 9 | 139 | 4.24e-24 | 94.4 |
| Msa1235730 | MtrunA17_Chr4g0026141 | 36.364 | 154 | 88 | 4 | 1 | 145 | 5 | 157 | 4.67e-24 | 94.0 |
| Msa1235730 | MtrunA17_Chr8g0359921 | 39.259 | 135 | 78 | 2 | 1 | 135 | 14 | 144 | 6.08e-24 | 95.1 |
| Msa1235730 | MtrunA17_Chr8g0364791 | 34.615 | 130 | 83 | 1 | 4 | 133 | 9 | 136 | 7.30e-24 | 95.9 |
| Msa1235730 | MtrunA17_Chr5g0417791 | 36.170 | 141 | 86 | 2 | 1 | 141 | 3 | 139 | 1.42e-23 | 92.8 |
| Msa1235730 | MtrunA17_Chr8g0384721 | 39.394 | 132 | 75 | 2 | 1 | 132 | 7 | 133 | 2.81e-23 | 92.4 |
| Msa1235730 | MtrunA17_Chr2g0321741 | 41.880 | 117 | 65 | 2 | 22 | 138 | 13 | 126 | 3.32e-23 | 93.6 |
| Msa1235730 | MtrunA17_Chr2g0318081 | 38.519 | 135 | 79 | 2 | 1 | 135 | 16 | 146 | 3.99e-23 | 93.2 |
| Msa1235730 | MtrunA17_Chr8g0346001 | 34.884 | 129 | 81 | 2 | 1 | 128 | 15 | 141 | 8.56e-23 | 93.2 |
| Msa1235730 | MtrunA17_Chr4g0076731 | 40.625 | 128 | 72 | 3 | 1 | 128 | 55 | 178 | 1.21e-22 | 92.4 |
| Msa1235730 | MtrunA17_Chr2g0321631 | 36.765 | 136 | 81 | 3 | 2 | 133 | 5 | 139 | 1.38e-22 | 90.1 |
| Msa1235730 | MtrunA17_Chr2g0326361 | 36.364 | 132 | 82 | 1 | 1 | 132 | 14 | 143 | 3.73e-22 | 90.1 |
| Msa1235730 | MtrunA17_Chr8g0361731 | 36.800 | 125 | 77 | 1 | 4 | 128 | 17 | 139 | 5.37e-22 | 90.5 |
| Msa1235730 | MtrunA17_Chr2g0311661 | 36.220 | 127 | 78 | 2 | 4 | 128 | 24 | 149 | 9.89e-22 | 88.6 |
| Msa1235730 | MtrunA17_Chr2g0311651 | 37.008 | 127 | 77 | 2 | 4 | 128 | 25 | 150 | 1.42e-21 | 88.6 |
| Msa1235730 | MtrunA17_Chr7g0266701 | 36.306 | 157 | 87 | 4 | 1 | 145 | 4 | 159 | 4.83e-21 | 86.3 |
| Msa1235730 | MtrunA17_Chr6g0453131 | 38.760 | 129 | 75 | 3 | 1 | 129 | 16 | 140 | 7.50e-21 | 87.4 |
| Msa1235730 | MtrunA17_Chr5g0417001 | 34.921 | 126 | 80 | 1 | 4 | 129 | 17 | 140 | 1.08e-19 | 84.0 |
| Msa1235730 | MtrunA17_Chr5g0442771 | 35.461 | 141 | 88 | 2 | 4 | 143 | 21 | 159 | 3.36e-19 | 82.0 |
| Msa1235730 | MtrunA17_Chr3g0131911 | 32.090 | 134 | 85 | 2 | 1 | 132 | 14 | 143 | 4.22e-19 | 80.5 |
| Msa1235730 | MtrunA17_Chr4g0038751 | 37.778 | 135 | 80 | 3 | 4 | 136 | 18 | 150 | 3.30e-18 | 79.3 |
| Msa1235730 | MtrunA17_Chr7g0251651 | 32.031 | 128 | 83 | 4 | 1 | 128 | 18 | 141 | 1.11e-15 | 70.9 |
| Msa1235730 | MtrunA17_Chr7g0251661 | 28.906 | 128 | 87 | 4 | 1 | 128 | 10 | 133 | 3.23e-14 | 65.9 |
| Msa1235730 | MtrunA17_Chr4g0050701 | 28.906 | 128 | 81 | 2 | 1 | 128 | 11 | 128 | 5.27e-13 | 63.5 |
| Msa1235730 | MtrunA17_Chr7g0243371 | 38.356 | 73 | 45 | 0 | 56 | 128 | 17 | 89 | 1.81e-12 | 60.5 |
| Msa1235730 | MtrunA17_Chr3g0113001 | 46.575 | 73 | 37 | 2 | 56 | 128 | 18 | 88 | 3.76e-12 | 62.4 |
| Msa1235730 | MtrunA17_Chr7g0251671 | 26.562 | 128 | 90 | 3 | 1 | 128 | 10 | 133 | 1.75e-11 | 58.9 |
| Msa1235730 | MtrunA17_Chr3g0113031 | 50.820 | 61 | 28 | 2 | 68 | 128 | 5 | 63 | 7.05e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1235730 | AT3G49530.1 | 42.405 | 158 | 85 | 3 | 1 | 153 | 13 | 169 | 5.94e-37 | 132 |
| Msa1235730 | AT3G49530.2 | 42.405 | 158 | 85 | 3 | 1 | 153 | 13 | 169 | 2.68e-36 | 129 |
| Msa1235730 | AT1G33060.2 | 46.715 | 137 | 71 | 1 | 1 | 137 | 24 | 158 | 1.10e-35 | 130 |
| Msa1235730 | AT1G33060.1 | 46.715 | 137 | 71 | 1 | 1 | 137 | 24 | 158 | 1.34e-35 | 130 |
| Msa1235730 | AT4G35580.3 | 45.455 | 143 | 70 | 2 | 1 | 143 | 9 | 143 | 3.56e-35 | 128 |
| Msa1235730 | AT4G35580.2 | 45.455 | 143 | 70 | 2 | 1 | 143 | 9 | 143 | 4.14e-35 | 128 |
| Msa1235730 | AT4G35580.1 | 45.455 | 143 | 70 | 2 | 1 | 143 | 9 | 143 | 5.23e-35 | 127 |
| Msa1235730 | AT5G24590.2 | 42.208 | 154 | 83 | 2 | 1 | 149 | 13 | 165 | 1.36e-34 | 125 |
| Msa1235730 | AT3G15170.1 | 42.969 | 128 | 71 | 1 | 1 | 128 | 20 | 145 | 2.60e-31 | 114 |
| Msa1235730 | AT5G17260.1 | 44.531 | 128 | 69 | 1 | 1 | 128 | 6 | 131 | 3.16e-31 | 117 |
| Msa1235730 | AT2G27300.1 | 40.741 | 135 | 77 | 2 | 4 | 138 | 17 | 148 | 3.48e-31 | 114 |
| Msa1235730 | AT1G65910.1 | 44.531 | 128 | 69 | 1 | 1 | 128 | 6 | 131 | 1.88e-30 | 115 |
| Msa1235730 | AT3G03200.1 | 43.750 | 128 | 70 | 1 | 1 | 128 | 6 | 131 | 7.91e-30 | 113 |
| Msa1235730 | AT5G53950.1 | 42.969 | 128 | 71 | 1 | 1 | 128 | 17 | 142 | 1.36e-29 | 111 |
| Msa1235730 | AT3G10500.1 | 40.769 | 130 | 75 | 1 | 4 | 133 | 12 | 139 | 1.65e-29 | 112 |
| Msa1235730 | AT2G24430.2 | 41.406 | 128 | 73 | 1 | 1 | 128 | 16 | 141 | 2.09e-29 | 109 |
| Msa1235730 | AT2G24430.1 | 41.406 | 128 | 73 | 1 | 1 | 128 | 16 | 141 | 2.09e-29 | 109 |
| Msa1235730 | AT5G04410.1 | 43.200 | 125 | 69 | 1 | 4 | 128 | 12 | 134 | 2.67e-29 | 112 |
| Msa1235730 | AT3G17730.1 | 40.602 | 133 | 77 | 1 | 1 | 133 | 6 | 136 | 4.63e-29 | 107 |
| Msa1235730 | AT5G46590.1 | 39.394 | 132 | 79 | 1 | 1 | 132 | 6 | 136 | 4.69e-29 | 108 |
| Msa1235730 | AT5G46590.2 | 39.394 | 132 | 79 | 1 | 1 | 132 | 6 | 136 | 4.89e-29 | 107 |
| Msa1235730 | AT4G17980.1 | 40.152 | 132 | 79 | 0 | 1 | 132 | 6 | 137 | 5.73e-29 | 107 |
| Msa1235730 | AT5G18270.2 | 42.188 | 128 | 71 | 2 | 1 | 128 | 21 | 145 | 9.39e-29 | 108 |
| Msa1235730 | AT1G76420.1 | 40.152 | 132 | 77 | 1 | 1 | 132 | 22 | 151 | 9.74e-29 | 108 |
| Msa1235730 | AT3G44290.2 | 43.750 | 128 | 69 | 2 | 4 | 131 | 17 | 141 | 1.56e-28 | 105 |
| Msa1235730 | AT4G17980.2 | 40.152 | 132 | 79 | 0 | 1 | 132 | 6 | 137 | 1.83e-28 | 106 |
| Msa1235730 | AT5G22290.1 | 43.200 | 125 | 68 | 2 | 4 | 128 | 24 | 145 | 2.39e-28 | 107 |
| Msa1235730 | AT1G54330.1 | 38.621 | 145 | 87 | 1 | 1 | 145 | 6 | 148 | 3.13e-28 | 106 |
| Msa1235730 | AT3G10490.1 | 39.844 | 128 | 75 | 1 | 4 | 131 | 30 | 155 | 3.90e-28 | 104 |
| Msa1235730 | AT5G18270.1 | 41.406 | 128 | 72 | 2 | 1 | 128 | 21 | 145 | 4.11e-28 | 106 |
| Msa1235730 | AT3G44290.1 | 43.750 | 128 | 69 | 2 | 4 | 131 | 17 | 141 | 1.72e-27 | 105 |
| Msa1235730 | AT3G10480.1 | 41.406 | 128 | 73 | 1 | 4 | 131 | 30 | 155 | 1.91e-27 | 106 |
| Msa1235730 | AT3G10480.2 | 41.406 | 128 | 73 | 1 | 4 | 131 | 30 | 155 | 2.07e-27 | 106 |
| Msa1235730 | AT3G18400.1 | 40.625 | 128 | 72 | 2 | 1 | 128 | 5 | 128 | 3.20e-27 | 103 |
| Msa1235730 | AT5G61430.1 | 39.241 | 158 | 85 | 5 | 1 | 151 | 16 | 169 | 3.66e-27 | 103 |
| Msa1235730 | AT3G04060.1 | 40.625 | 128 | 73 | 2 | 1 | 128 | 20 | 144 | 8.07e-27 | 103 |
| Msa1235730 | AT3G10490.2 | 39.844 | 128 | 75 | 1 | 4 | 131 | 30 | 155 | 9.05e-27 | 104 |
| Msa1235730 | AT5G04395.1 | 37.589 | 141 | 76 | 2 | 1 | 129 | 28 | 168 | 1.90e-26 | 99.0 |
| Msa1235730 | AT5G08790.1 | 40.909 | 132 | 73 | 2 | 1 | 132 | 7 | 133 | 2.42e-26 | 100 |
| Msa1235730 | AT3G29035.1 | 44.531 | 128 | 67 | 3 | 1 | 128 | 24 | 147 | 2.50e-26 | 101 |
| Msa1235730 | AT5G07680.2 | 42.188 | 128 | 70 | 3 | 1 | 128 | 3 | 126 | 2.56e-26 | 101 |
| Msa1235730 | AT1G71930.2 | 36.567 | 134 | 82 | 2 | 1 | 133 | 9 | 140 | 3.01e-26 | 101 |
| Msa1235730 | AT1G71930.1 | 36.567 | 134 | 82 | 2 | 1 | 133 | 9 | 140 | 3.01e-26 | 101 |
| Msa1235730 | AT5G07680.1 | 42.188 | 128 | 70 | 3 | 1 | 128 | 17 | 140 | 3.27e-26 | 101 |
| Msa1235730 | AT5G39610.1 | 43.750 | 128 | 68 | 3 | 1 | 128 | 20 | 143 | 3.45e-26 | 100 |
| Msa1235730 | AT1G12260.2 | 37.984 | 129 | 77 | 2 | 1 | 128 | 7 | 133 | 4.28e-26 | 101 |
| Msa1235730 | AT2G33480.2 | 38.095 | 147 | 84 | 2 | 1 | 147 | 15 | 154 | 6.70e-26 | 99.4 |
| Msa1235730 | AT1G01720.1 | 41.860 | 129 | 70 | 2 | 1 | 129 | 7 | 130 | 7.64e-26 | 99.8 |
| Msa1235730 | AT1G34180.1 | 41.600 | 125 | 71 | 1 | 4 | 128 | 19 | 141 | 8.12e-26 | 102 |
| Msa1235730 | AT1G12260.1 | 37.984 | 129 | 77 | 2 | 1 | 128 | 7 | 133 | 8.98e-26 | 101 |
| Msa1235730 | AT1G62700.1 | 39.535 | 129 | 75 | 2 | 1 | 128 | 7 | 133 | 1.07e-25 | 100 |
| Msa1235730 | AT1G62700.2 | 39.535 | 129 | 75 | 2 | 1 | 128 | 7 | 133 | 1.07e-25 | 100 |
| Msa1235730 | AT1G02230.1 | 38.806 | 134 | 76 | 3 | 2 | 132 | 4 | 134 | 1.10e-25 | 100 |
| Msa1235730 | AT5G63790.1 | 40.909 | 132 | 73 | 2 | 1 | 132 | 50 | 176 | 1.36e-25 | 99.4 |
| Msa1235730 | AT5G63790.2 | 40.909 | 132 | 73 | 2 | 1 | 132 | 60 | 186 | 1.60e-25 | 99.4 |
| Msa1235730 | AT5G13180.1 | 37.984 | 129 | 75 | 1 | 1 | 129 | 14 | 137 | 1.71e-25 | 98.2 |
| Msa1235730 | AT2G33480.1 | 39.130 | 138 | 77 | 2 | 1 | 138 | 15 | 145 | 2.64e-25 | 97.8 |
| Msa1235730 | AT1G33280.1 | 39.535 | 129 | 75 | 2 | 1 | 128 | 8 | 134 | 3.36e-25 | 98.2 |
| Msa1235730 | AT1G69490.1 | 39.062 | 128 | 74 | 2 | 1 | 128 | 9 | 132 | 3.36e-25 | 97.4 |
| Msa1235730 | AT4G10350.1 | 37.226 | 137 | 83 | 2 | 1 | 136 | 9 | 143 | 3.73e-25 | 99.0 |
| Msa1235730 | AT5G09330.5 | 37.692 | 130 | 79 | 1 | 4 | 133 | 9 | 136 | 3.73e-25 | 100 |
| Msa1235730 | AT5G09330.2 | 37.692 | 130 | 79 | 1 | 4 | 133 | 9 | 136 | 3.73e-25 | 100 |
| Msa1235730 | AT5G09330.4 | 37.692 | 130 | 79 | 1 | 4 | 133 | 9 | 136 | 3.73e-25 | 100 |
| Msa1235730 | AT5G09330.3 | 37.692 | 130 | 79 | 1 | 4 | 133 | 9 | 136 | 3.73e-25 | 100 |
| Msa1235730 | AT5G09330.1 | 37.692 | 130 | 79 | 1 | 4 | 133 | 9 | 136 | 3.73e-25 | 100 |
| Msa1235730 | AT5G66300.1 | 34.586 | 133 | 84 | 2 | 1 | 132 | 12 | 142 | 4.46e-25 | 97.8 |
| Msa1235730 | AT3G15500.1 | 41.985 | 131 | 72 | 2 | 1 | 131 | 14 | 140 | 5.02e-25 | 98.2 |
| Msa1235730 | AT5G62380.2 | 37.984 | 129 | 77 | 2 | 1 | 128 | 7 | 133 | 7.50e-25 | 98.2 |
| Msa1235730 | AT5G62380.1 | 37.984 | 129 | 77 | 2 | 1 | 128 | 7 | 133 | 7.50e-25 | 98.2 |
| Msa1235730 | AT1G34180.3 | 41.600 | 125 | 71 | 1 | 4 | 128 | 19 | 141 | 7.52e-25 | 99.4 |
| Msa1235730 | AT1G77450.1 | 40.625 | 128 | 71 | 2 | 2 | 129 | 11 | 133 | 1.74e-24 | 95.5 |
| Msa1235730 | AT3G61910.1 | 34.884 | 129 | 81 | 2 | 1 | 128 | 11 | 137 | 1.84e-24 | 97.1 |
| Msa1235730 | AT1G34190.1 | 40.000 | 125 | 73 | 1 | 4 | 128 | 19 | 141 | 2.25e-24 | 98.2 |
| Msa1235730 | AT4G01520.1 | 38.971 | 136 | 80 | 3 | 2 | 134 | 5 | 140 | 2.76e-24 | 95.9 |
| Msa1235730 | AT4G01550.1 | 40.132 | 152 | 88 | 3 | 3 | 151 | 6 | 157 | 3.80e-24 | 97.4 |
| Msa1235730 | AT1G32510.1 | 34.731 | 167 | 97 | 2 | 1 | 155 | 6 | 172 | 5.23e-24 | 94.7 |
| Msa1235730 | AT4G36160.1 | 36.434 | 129 | 79 | 2 | 1 | 128 | 10 | 136 | 5.48e-24 | 96.3 |
| Msa1235730 | AT4G36160.3 | 36.434 | 129 | 79 | 2 | 1 | 128 | 10 | 136 | 5.48e-24 | 96.3 |
| Msa1235730 | AT4G36160.2 | 36.434 | 129 | 79 | 2 | 1 | 128 | 14 | 140 | 5.93e-24 | 96.3 |
| Msa1235730 | AT4G28530.1 | 34.722 | 144 | 76 | 2 | 1 | 128 | 10 | 151 | 6.18e-24 | 95.9 |
| Msa1235730 | AT2G46770.1 | 34.884 | 129 | 81 | 2 | 1 | 128 | 16 | 142 | 7.21e-24 | 95.5 |
| Msa1235730 | AT1G52890.1 | 41.221 | 131 | 73 | 2 | 1 | 131 | 14 | 140 | 7.28e-24 | 95.1 |
| Msa1235730 | AT4G01540.4 | 40.741 | 135 | 77 | 3 | 3 | 134 | 6 | 140 | 7.75e-24 | 95.9 |
| Msa1235730 | AT4G01540.2 | 40.741 | 135 | 77 | 3 | 3 | 134 | 6 | 140 | 8.48e-24 | 96.3 |
| Msa1235730 | AT4G01540.3 | 40.741 | 135 | 77 | 3 | 3 | 134 | 6 | 140 | 8.79e-24 | 95.9 |
| Msa1235730 | AT4G01540.1 | 40.741 | 135 | 77 | 3 | 3 | 134 | 6 | 140 | 1.07e-23 | 96.3 |
| Msa1235730 | AT3G15510.1 | 39.695 | 131 | 76 | 2 | 5 | 134 | 21 | 149 | 1.15e-23 | 95.1 |
| Msa1235730 | AT1G79580.3 | 37.209 | 129 | 79 | 2 | 1 | 128 | 17 | 144 | 1.25e-23 | 95.1 |
| Msa1235730 | AT1G79580.5 | 37.209 | 129 | 79 | 2 | 1 | 128 | 17 | 144 | 1.25e-23 | 95.1 |
| Msa1235730 | AT1G79580.4 | 37.209 | 129 | 79 | 2 | 1 | 128 | 17 | 144 | 1.25e-23 | 95.1 |
| Msa1235730 | AT1G79580.2 | 37.209 | 129 | 79 | 2 | 1 | 128 | 17 | 144 | 1.25e-23 | 95.1 |
| Msa1235730 | AT1G79580.1 | 37.209 | 129 | 79 | 2 | 1 | 128 | 17 | 144 | 1.25e-23 | 95.1 |
| Msa1235730 | AT1G61110.1 | 41.406 | 128 | 72 | 2 | 1 | 128 | 16 | 140 | 1.34e-23 | 94.4 |
| Msa1235730 | AT3G04420.2 | 39.850 | 133 | 76 | 2 | 2 | 132 | 4 | 134 | 1.62e-23 | 93.6 |
| Msa1235730 | AT4G27410.2 | 40.458 | 131 | 74 | 2 | 1 | 131 | 14 | 140 | 1.62e-23 | 93.6 |
| Msa1235730 | AT3G04420.1 | 39.850 | 133 | 76 | 2 | 2 | 132 | 4 | 134 | 1.80e-23 | 94.4 |
| Msa1235730 | AT2G18060.3 | 35.659 | 129 | 80 | 2 | 1 | 128 | 9 | 135 | 2.25e-23 | 94.4 |
| Msa1235730 | AT2G18060.1 | 35.659 | 129 | 80 | 2 | 1 | 128 | 9 | 135 | 2.25e-23 | 94.4 |
| Msa1235730 | AT2G02450.1 | 39.062 | 128 | 74 | 3 | 1 | 128 | 52 | 175 | 3.91e-23 | 94.0 |
| Msa1235730 | AT2G02450.2 | 39.062 | 128 | 74 | 3 | 1 | 128 | 52 | 175 | 5.44e-23 | 94.0 |
| Msa1235730 | AT3G10480.3 | 32.919 | 161 | 73 | 2 | 4 | 131 | 30 | 188 | 6.75e-23 | 94.0 |
| Msa1235730 | AT1G56010.2 | 35.135 | 148 | 77 | 5 | 1 | 135 | 19 | 160 | 9.21e-23 | 92.0 |
| Msa1235730 | AT1G34180.2 | 37.956 | 137 | 71 | 2 | 4 | 128 | 19 | 153 | 1.00e-22 | 93.6 |
| Msa1235730 | AT1G02250.1 | 42.424 | 132 | 70 | 4 | 2 | 130 | 4 | 132 | 1.73e-22 | 92.0 |
| Msa1235730 | AT3G12977.1 | 36.719 | 128 | 77 | 2 | 1 | 128 | 18 | 141 | 2.13e-22 | 90.5 |
| Msa1235730 | AT5G22380.1 | 37.037 | 135 | 80 | 3 | 3 | 133 | 7 | 140 | 3.47e-22 | 89.0 |
| Msa1235730 | AT1G32770.1 | 34.074 | 135 | 86 | 2 | 1 | 134 | 16 | 148 | 5.38e-22 | 90.5 |
| Msa1235730 | AT3G04070.2 | 36.691 | 139 | 83 | 2 | 1 | 136 | 10 | 146 | 6.54e-22 | 90.1 |
| Msa1235730 | AT3G04070.1 | 36.691 | 139 | 83 | 2 | 1 | 136 | 10 | 146 | 1.11e-21 | 89.7 |
| Msa1235730 | AT1G34180.4 | 38.849 | 139 | 67 | 3 | 4 | 128 | 19 | 153 | 1.14e-21 | 90.5 |
| Msa1235730 | AT4G27410.3 | 36.986 | 146 | 75 | 2 | 1 | 131 | 14 | 157 | 1.19e-21 | 89.0 |
| Msa1235730 | AT5G64060.1 | 35.385 | 130 | 82 | 1 | 4 | 133 | 9 | 136 | 1.67e-21 | 89.4 |
| Msa1235730 | AT1G26870.1 | 37.600 | 125 | 76 | 1 | 4 | 128 | 19 | 141 | 1.73e-21 | 89.7 |
| Msa1235730 | AT5G39820.1 | 37.600 | 125 | 76 | 1 | 4 | 128 | 23 | 145 | 1.89e-21 | 89.0 |
| Msa1235730 | AT3G12910.1 | 37.500 | 128 | 74 | 4 | 4 | 128 | 24 | 148 | 2.34e-20 | 85.5 |
| Msa1235730 | AT2G17040.1 | 38.583 | 127 | 75 | 2 | 4 | 129 | 9 | 133 | 6.74e-20 | 83.6 |
| Msa1235730 | AT1G32870.1 | 41.270 | 126 | 68 | 3 | 4 | 128 | 13 | 133 | 7.09e-20 | 85.5 |
| Msa1235730 | AT1G32870.2 | 41.270 | 126 | 68 | 3 | 4 | 128 | 13 | 133 | 8.08e-20 | 85.5 |
| Msa1235730 | AT1G02220.1 | 37.500 | 136 | 72 | 4 | 2 | 132 | 4 | 131 | 1.71e-19 | 84.0 |
| Msa1235730 | AT1G32870.3 | 41.270 | 126 | 68 | 3 | 4 | 128 | 49 | 169 | 2.29e-19 | 84.0 |
| Msa1235730 | AT3G44350.1 | 31.111 | 135 | 89 | 3 | 1 | 132 | 5 | 138 | 4.31e-18 | 76.6 |
| Msa1235730 | AT1G01010.1 | 36.296 | 135 | 76 | 3 | 3 | 129 | 5 | 137 | 9.39e-18 | 79.3 |
| Msa1235730 | AT2G43000.1 | 30.612 | 147 | 95 | 3 | 4 | 147 | 21 | 163 | 1.31e-17 | 77.4 |
| Msa1235730 | AT3G44350.2 | 31.343 | 134 | 88 | 3 | 1 | 131 | 5 | 137 | 1.90e-17 | 76.6 |
| Msa1235730 | AT3G04430.1 | 39.259 | 135 | 68 | 4 | 7 | 130 | 6 | 137 | 5.82e-17 | 74.3 |
| Msa1235730 | AT1G52880.1 | 37.594 | 133 | 78 | 3 | 5 | 134 | 21 | 151 | 2.98e-16 | 74.3 |
| Msa1235730 | AT4G28530.2 | 31.061 | 132 | 73 | 2 | 1 | 116 | 10 | 139 | 4.74e-14 | 68.2 |
| Msa1235730 | AT2G33480.3 | 38.554 | 83 | 49 | 1 | 56 | 138 | 8 | 88 | 5.05e-13 | 64.3 |
| Msa1235730 | AT1G56010.1 | 35.227 | 88 | 45 | 2 | 58 | 135 | 8 | 93 | 2.14e-12 | 63.2 |
| Msa1235730 | AT5G64530.2 | 32.031 | 128 | 73 | 3 | 1 | 128 | 3 | 116 | 2.64e-12 | 61.2 |
| Msa1235730 | AT5G61430.2 | 37.864 | 103 | 55 | 4 | 56 | 151 | 6 | 106 | 2.80e-12 | 63.2 |
| Msa1235730 | AT3G01600.1 | 30.137 | 146 | 80 | 6 | 1 | 129 | 55 | 195 | 3.63e-12 | 63.2 |
| Msa1235730 | AT5G64530.1 | 32.031 | 128 | 73 | 3 | 1 | 128 | 3 | 116 | 1.07e-11 | 60.5 |
| Msa1235730 | AT3G12977.2 | 39.437 | 71 | 41 | 1 | 58 | 128 | 20 | 88 | 1.49e-11 | 60.5 |
| Msa1235730 | AT4G10350.2 | 35.000 | 80 | 50 | 1 | 57 | 136 | 19 | 96 | 3.78e-11 | 60.1 |
Find 30 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAACATTGTTGGTTCCTT+TGG | 0.265893 | 8_2:-13907744 | None:intergenic |
| AAAGGAACCAACAATGTTAT+TGG | 0.267087 | 8_2:+13907746 | Msa1235730:CDS |
| CCTGGCCTGCGGTCTGTTAT+AGG | 0.279779 | 8_2:+13908042 | Msa1235730:CDS |
| TCCAAGAAACAATGCCTATA+GGG | 0.341997 | 8_2:+13907324 | None:intergenic |
| ATCCAAGAAACAATGCCTAT+AGG | 0.418860 | 8_2:+13907323 | None:intergenic |
| TTCACAAGCTCTTCATCTGT+TGG | 0.419604 | 8_2:-13907359 | None:intergenic |
| CTCATCATGAAAAGACCAAC+TGG | 0.423731 | 8_2:+13907807 | Msa1235730:CDS |
| TCACAAGCTCTTCATCTGTT+GGG | 0.425279 | 8_2:-13907358 | None:intergenic |
| CCTATAACAGACCGCAGGCC+AGG | 0.440466 | 8_2:-13908042 | None:intergenic |
| AGAGCTTGTGAAATTCTACT+TGG | 0.462581 | 8_2:+13907370 | Msa1235730:CDS |
| ATTCTACTTGGAACACAAGT+TGG | 0.488440 | 8_2:+13907382 | Msa1235730:CDS |
| GTGATGTTTAGCATTGTTGA+AGG | 0.508891 | 8_2:+13907592 | Msa1235730:intron |
| GTTTGGTTATTGGAAGATCA+CGG | 0.513322 | 8_2:+13907700 | Msa1235730:CDS |
| ACAGACCGCAGGCCAGGCTT+AGG | 0.524191 | 8_2:-13908036 | None:intergenic |
| TTTGGTTATTGGAAGATCAC+GGG | 0.525568 | 8_2:+13907701 | Msa1235730:CDS |
| ATAATACATGGTAATTTCCA+AGG | 0.536072 | 8_2:-13907461 | None:intergenic |
| AGCATTGTTGAAGGTAAACT+CGG | 0.565194 | 8_2:+13907601 | Msa1235730:intron |
| GAAGGTAAACTCGGATGACT+CGG | 0.576119 | 8_2:+13907610 | Msa1235730:CDS |
| ACCTTGACATCATTCCACCT+TGG | 0.580282 | 8_2:+13907444 | Msa1235730:CDS |
| TGTTAATTGCATGATACTCG+TGG | 0.595606 | 8_2:-13907835 | None:intergenic |
| TACTTGGAACACAAGTTGGT+CGG | 0.595701 | 8_2:+13907386 | Msa1235730:CDS |
| CGAGTATCATGCAATTAACA+AGG | 0.605092 | 8_2:+13907838 | Msa1235730:CDS |
| TCCAAGGTGGAATGATGTCA+AGG | 0.605627 | 8_2:-13907445 | None:intergenic |
| AAACGTCAAATCAAGACCAA+AGG | 0.640209 | 8_2:+13907728 | Msa1235730:CDS |
| GTAGGCCTATAACAGACCGC+AGG | 0.655637 | 8_2:-13908047 | None:intergenic |
| ATACTCGTGGACAACCCAGT+TGG | 0.659093 | 8_2:-13907822 | None:intergenic |
| TAAAGCCTAAGCCTGGCCTG+CGG | 0.669901 | 8_2:+13908031 | Msa1235730:intron |
| ATACATGGTAATTTCCAAGG+TGG | 0.691316 | 8_2:-13907458 | None:intergenic |
| CTAGTGTTCTATGCAAGTCG+CGG | 0.702431 | 8_2:+13907782 | Msa1235730:CDS |
| TCATCATGAAAAGACCAACT+GGG | 0.704155 | 8_2:+13907808 | Msa1235730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATATAATATTATAATACA+TGG | - | chr8_2:13907476-13907495 | None:intergenic | 10.0% |
| !!! | AAAAATAAAAGACATTATTT+TGG | - | chr8_2:13907512-13907531 | None:intergenic | 10.0% |
| !! | TCTTAAAAAAAAAAAAAAAC+AGG | - | chr8_2:13907929-13907948 | None:intergenic | 10.0% |
| !! | AGATATAATATTATAATACA+TGG | - | chr8_2:13907476-13907495 | None:intergenic | 10.0% |
| !!! | AAAAATAAAAGACATTATTT+TGG | - | chr8_2:13907512-13907531 | None:intergenic | 10.0% |
| !! | TCTTAAAAAAAAAAAAAAAC+AGG | - | chr8_2:13907929-13907948 | None:intergenic | 10.0% |
| !! | TGTAAAAGAAAAAACAAGTT+TGG | + | chr8_2:13907683-13907702 | Msa1235730:CDS | 20.0% |
| !!! | TATGACTTCTTTTTTTGAAA+AGG | + | chr8_2:13907861-13907880 | Msa1235730:intron | 20.0% |
| !!! | TTCTTTTTTTGAAAAGGAAA+AGG | + | chr8_2:13907867-13907886 | Msa1235730:intron | 20.0% |
| !!! | TCTTTTTTTGAAAAGGAAAA+GGG | + | chr8_2:13907868-13907887 | Msa1235730:intron | 20.0% |
| !! | TGTAAAAGAAAAAACAAGTT+TGG | + | chr8_2:13907683-13907702 | Msa1235730:CDS | 20.0% |
| !!! | TATGACTTCTTTTTTTGAAA+AGG | + | chr8_2:13907861-13907880 | Msa1235730:intron | 20.0% |
| !!! | TTCTTTTTTTGAAAAGGAAA+AGG | + | chr8_2:13907867-13907886 | Msa1235730:intron | 20.0% |
| !!! | TCTTTTTTTGAAAAGGAAAA+GGG | + | chr8_2:13907868-13907887 | Msa1235730:intron | 20.0% |
| ! | ATAATACATGGTAATTTCCA+AGG | - | chr8_2:13907464-13907483 | None:intergenic | 25.0% |
| !! | TACTTTTATGATGCACTATA+AGG | + | chr8_2:13907538-13907557 | Msa1235730:intron | 25.0% |
| !!! | TTTTTTGAACTTCAAACCAA+GGG | - | chr8_2:13907654-13907673 | None:intergenic | 25.0% |
| ! | GAAAAAACAAGTTTGGTTAT+TGG | + | chr8_2:13907690-13907709 | Msa1235730:CDS | 25.0% |
| !! | TTTTGTTCCAATAACATTGT+TGG | - | chr8_2:13907756-13907775 | None:intergenic | 25.0% |
| ! | ATAATACATGGTAATTTCCA+AGG | - | chr8_2:13907464-13907483 | None:intergenic | 25.0% |
| !! | TACTTTTATGATGCACTATA+AGG | + | chr8_2:13907538-13907557 | Msa1235730:intron | 25.0% |
| !!! | TTTTTTGAACTTCAAACCAA+GGG | - | chr8_2:13907654-13907673 | None:intergenic | 25.0% |
| ! | GAAAAAACAAGTTTGGTTAT+TGG | + | chr8_2:13907690-13907709 | Msa1235730:CDS | 25.0% |
| !! | TTTTGTTCCAATAACATTGT+TGG | - | chr8_2:13907756-13907775 | None:intergenic | 25.0% |
| ! | TTTTATGATGCACTATAAGG+TGG | + | chr8_2:13907541-13907560 | Msa1235730:intron | 30.0% |
| !! | TTGTTTTTCTTCAATTCCCT+TGG | + | chr8_2:13907635-13907654 | Msa1235730:CDS | 30.0% |
| !!! | CTTTTTTGAACTTCAAACCA+AGG | - | chr8_2:13907655-13907674 | None:intergenic | 30.0% |
| ! | CTTGGTTTGAAGTTCAAAAA+AGG | + | chr8_2:13907653-13907672 | Msa1235730:CDS | 30.0% |
| !! | AATAACATTGTTGGTTCCTT+TGG | - | chr8_2:13907747-13907766 | None:intergenic | 30.0% |
| AAAGGAACCAACAATGTTAT+TGG | + | chr8_2:13907746-13907765 | Msa1235730:CDS | 30.0% | |
| AAGAAAATACCTATGTGACT+AGG | + | chr8_2:13907945-13907964 | Msa1235730:intron | 30.0% | |
| AGAAAATACCTATGTGACTA+GGG | + | chr8_2:13907946-13907965 | Msa1235730:intron | 30.0% | |
| AAATATGACAGACTAAGCTT+AGG | - | chr8_2:13908008-13908027 | None:intergenic | 30.0% | |
| !!! | ATTTTTTTAAAGCCTAAGCC+TGG | + | chr8_2:13908024-13908043 | Msa1235730:intron | 30.0% |
| ! | TTTTATGATGCACTATAAGG+TGG | + | chr8_2:13907541-13907560 | Msa1235730:intron | 30.0% |
| !! | TTGTTTTTCTTCAATTCCCT+TGG | + | chr8_2:13907635-13907654 | Msa1235730:CDS | 30.0% |
| !!! | CTTTTTTGAACTTCAAACCA+AGG | - | chr8_2:13907655-13907674 | None:intergenic | 30.0% |
| ! | CTTGGTTTGAAGTTCAAAAA+AGG | + | chr8_2:13907653-13907672 | Msa1235730:CDS | 30.0% |
| !! | AATAACATTGTTGGTTCCTT+TGG | - | chr8_2:13907747-13907766 | None:intergenic | 30.0% |
| AAAGGAACCAACAATGTTAT+TGG | + | chr8_2:13907746-13907765 | Msa1235730:CDS | 30.0% | |
| AAGAAAATACCTATGTGACT+AGG | + | chr8_2:13907945-13907964 | Msa1235730:intron | 30.0% | |
| AGAAAATACCTATGTGACTA+GGG | + | chr8_2:13907946-13907965 | Msa1235730:intron | 30.0% | |
| AAATATGACAGACTAAGCTT+AGG | - | chr8_2:13908008-13908027 | None:intergenic | 30.0% | |
| !!! | ATTTTTTTAAAGCCTAAGCC+TGG | + | chr8_2:13908024-13908043 | Msa1235730:intron | 30.0% |
| AGAGCTTGTGAAATTCTACT+TGG | + | chr8_2:13907370-13907389 | Msa1235730:CDS | 35.0% | |
| ATTCTACTTGGAACACAAGT+TGG | + | chr8_2:13907382-13907401 | Msa1235730:CDS | 35.0% | |
| ATACATGGTAATTTCCAAGG+TGG | - | chr8_2:13907461-13907480 | None:intergenic | 35.0% | |
| GTGATGTTTAGCATTGTTGA+AGG | + | chr8_2:13907592-13907611 | Msa1235730:intron | 35.0% | |
| AGCATTGTTGAAGGTAAACT+CGG | + | chr8_2:13907601-13907620 | Msa1235730:intron | 35.0% | |
| GTTTGGTTATTGGAAGATCA+CGG | + | chr8_2:13907700-13907719 | Msa1235730:CDS | 35.0% | |
| TTTGGTTATTGGAAGATCAC+GGG | + | chr8_2:13907701-13907720 | Msa1235730:CDS | 35.0% | |
| AAACGTCAAATCAAGACCAA+AGG | + | chr8_2:13907728-13907747 | Msa1235730:CDS | 35.0% | |
| TCATCATGAAAAGACCAACT+GGG | + | chr8_2:13907808-13907827 | Msa1235730:CDS | 35.0% | |
| TGTTAATTGCATGATACTCG+TGG | - | chr8_2:13907838-13907857 | None:intergenic | 35.0% | |
| CGAGTATCATGCAATTAACA+AGG | + | chr8_2:13907838-13907857 | Msa1235730:CDS | 35.0% | |
| !!! | CTGTTATAGGCCTACTTTTT+AGG | + | chr8_2:13908055-13908074 | Msa1235730:CDS | 35.0% |
| AGAGCTTGTGAAATTCTACT+TGG | + | chr8_2:13907370-13907389 | Msa1235730:CDS | 35.0% | |
| ATTCTACTTGGAACACAAGT+TGG | + | chr8_2:13907382-13907401 | Msa1235730:CDS | 35.0% | |
| ATACATGGTAATTTCCAAGG+TGG | - | chr8_2:13907461-13907480 | None:intergenic | 35.0% | |
| GTGATGTTTAGCATTGTTGA+AGG | + | chr8_2:13907592-13907611 | Msa1235730:intron | 35.0% | |
| AGCATTGTTGAAGGTAAACT+CGG | + | chr8_2:13907601-13907620 | Msa1235730:intron | 35.0% | |
| GTTTGGTTATTGGAAGATCA+CGG | + | chr8_2:13907700-13907719 | Msa1235730:CDS | 35.0% | |
| TTTGGTTATTGGAAGATCAC+GGG | + | chr8_2:13907701-13907720 | Msa1235730:CDS | 35.0% | |
| AAACGTCAAATCAAGACCAA+AGG | + | chr8_2:13907728-13907747 | Msa1235730:CDS | 35.0% | |
| TCATCATGAAAAGACCAACT+GGG | + | chr8_2:13907808-13907827 | Msa1235730:CDS | 35.0% | |
| TGTTAATTGCATGATACTCG+TGG | - | chr8_2:13907838-13907857 | None:intergenic | 35.0% | |
| CGAGTATCATGCAATTAACA+AGG | + | chr8_2:13907838-13907857 | Msa1235730:CDS | 35.0% | |
| !!! | CTGTTATAGGCCTACTTTTT+AGG | + | chr8_2:13908055-13908074 | Msa1235730:CDS | 35.0% |
| TCACAAGCTCTTCATCTGTT+GGG | - | chr8_2:13907361-13907380 | None:intergenic | 40.0% | |
| TTCACAAGCTCTTCATCTGT+TGG | - | chr8_2:13907362-13907381 | None:intergenic | 40.0% | |
| !! | TACTTGGAACACAAGTTGGT+CGG | + | chr8_2:13907386-13907405 | Msa1235730:CDS | 40.0% |
| CTCATCATGAAAAGACCAAC+TGG | + | chr8_2:13907807-13907826 | Msa1235730:CDS | 40.0% | |
| AAAACAGGACGTGCTAGAAA+TGG | - | chr8_2:13907914-13907933 | None:intergenic | 40.0% | |
| AATACCTATGTGACTAGGGA+TGG | + | chr8_2:13907950-13907969 | Msa1235730:intron | 40.0% | |
| ATACCTATGTGACTAGGGAT+GGG | + | chr8_2:13907951-13907970 | Msa1235730:intron | 40.0% | |
| CATGCTCAGACCTAAAAAGT+AGG | - | chr8_2:13908068-13908087 | None:intergenic | 40.0% | |
| !!! | CTACTTTTTAGGTCTGAGCA+TGG | + | chr8_2:13908066-13908085 | Msa1235730:CDS | 40.0% |
| TCACAAGCTCTTCATCTGTT+GGG | - | chr8_2:13907361-13907380 | None:intergenic | 40.0% | |
| TTCACAAGCTCTTCATCTGT+TGG | - | chr8_2:13907362-13907381 | None:intergenic | 40.0% | |
| !! | TACTTGGAACACAAGTTGGT+CGG | + | chr8_2:13907386-13907405 | Msa1235730:CDS | 40.0% |
| CTCATCATGAAAAGACCAAC+TGG | + | chr8_2:13907807-13907826 | Msa1235730:CDS | 40.0% | |
| AAAACAGGACGTGCTAGAAA+TGG | - | chr8_2:13907914-13907933 | None:intergenic | 40.0% | |
| AATACCTATGTGACTAGGGA+TGG | + | chr8_2:13907950-13907969 | Msa1235730:intron | 40.0% | |
| ATACCTATGTGACTAGGGAT+GGG | + | chr8_2:13907951-13907970 | Msa1235730:intron | 40.0% | |
| CATGCTCAGACCTAAAAAGT+AGG | - | chr8_2:13908068-13908087 | None:intergenic | 40.0% | |
| !!! | CTACTTTTTAGGTCTGAGCA+TGG | + | chr8_2:13908066-13908085 | Msa1235730:CDS | 40.0% |
| ACCTTGACATCATTCCACCT+TGG | + | chr8_2:13907444-13907463 | Msa1235730:CDS | 45.0% | |
| TCCAAGGTGGAATGATGTCA+AGG | - | chr8_2:13907448-13907467 | None:intergenic | 45.0% | |
| GAAGGTAAACTCGGATGACT+CGG | + | chr8_2:13907610-13907629 | Msa1235730:CDS | 45.0% | |
| CTAGTGTTCTATGCAAGTCG+CGG | + | chr8_2:13907782-13907801 | Msa1235730:CDS | 45.0% | |
| GTGCTAGAAATGGATAGCGT+TGG | - | chr8_2:13907904-13907923 | None:intergenic | 45.0% | |
| ATTCCCATCCCTAGTCACAT+AGG | - | chr8_2:13907957-13907976 | None:intergenic | 45.0% | |
| ATGTGACTAGGGATGGGAAT+AGG | + | chr8_2:13907957-13907976 | Msa1235730:intron | 45.0% | |
| ACTAGGGATGGGAATAGGTT+AGG | + | chr8_2:13907962-13907981 | Msa1235730:intron | 45.0% | |
| ACCTTGACATCATTCCACCT+TGG | + | chr8_2:13907444-13907463 | Msa1235730:CDS | 45.0% | |
| TCCAAGGTGGAATGATGTCA+AGG | - | chr8_2:13907448-13907467 | None:intergenic | 45.0% | |
| GAAGGTAAACTCGGATGACT+CGG | + | chr8_2:13907610-13907629 | Msa1235730:CDS | 45.0% | |
| CTAGTGTTCTATGCAAGTCG+CGG | + | chr8_2:13907782-13907801 | Msa1235730:CDS | 45.0% | |
| GTGCTAGAAATGGATAGCGT+TGG | - | chr8_2:13907904-13907923 | None:intergenic | 45.0% | |
| ATTCCCATCCCTAGTCACAT+AGG | - | chr8_2:13907957-13907976 | None:intergenic | 45.0% | |
| ATGTGACTAGGGATGGGAAT+AGG | + | chr8_2:13907957-13907976 | Msa1235730:intron | 45.0% | |
| ACTAGGGATGGGAATAGGTT+AGG | + | chr8_2:13907962-13907981 | Msa1235730:intron | 45.0% | |
| GGGCGAAATCTGTACCCTAT+AGG | - | chr8_2:13907341-13907360 | None:intergenic | 50.0% | |
| ATACTCGTGGACAACCCAGT+TGG | - | chr8_2:13907825-13907844 | None:intergenic | 50.0% | |
| GGAATAGGTTAGGTCGAGCT+AGG | + | chr8_2:13907972-13907991 | Msa1235730:intron | 50.0% | |
| GGGCGAAATCTGTACCCTAT+AGG | - | chr8_2:13907341-13907360 | None:intergenic | 50.0% | |
| ATACTCGTGGACAACCCAGT+TGG | - | chr8_2:13907825-13907844 | None:intergenic | 50.0% | |
| GGAATAGGTTAGGTCGAGCT+AGG | + | chr8_2:13907972-13907991 | Msa1235730:intron | 50.0% | |
| AGGTCGAGCTAGGCTTTGCA+AGG | + | chr8_2:13907982-13908001 | Msa1235730:intron | 55.0% | |
| TAAAGCCTAAGCCTGGCCTG+CGG | + | chr8_2:13908031-13908050 | Msa1235730:intron | 55.0% | |
| GTAGGCCTATAACAGACCGC+AGG | - | chr8_2:13908050-13908069 | None:intergenic | 55.0% | |
| AGGTCGAGCTAGGCTTTGCA+AGG | + | chr8_2:13907982-13908001 | Msa1235730:intron | 55.0% | |
| TAAAGCCTAAGCCTGGCCTG+CGG | + | chr8_2:13908031-13908050 | Msa1235730:intron | 55.0% | |
| GTAGGCCTATAACAGACCGC+AGG | - | chr8_2:13908050-13908069 | None:intergenic | 55.0% | |
| CCTATAACAGACCGCAGGCC+AGG | - | chr8_2:13908045-13908064 | None:intergenic | 60.0% | |
| CCTGGCCTGCGGTCTGTTAT+AGG | + | chr8_2:13908042-13908061 | Msa1235730:CDS | 60.0% | |
| CCTATAACAGACCGCAGGCC+AGG | - | chr8_2:13908045-13908064 | None:intergenic | 60.0% | |
| CCTGGCCTGCGGTCTGTTAT+AGG | + | chr8_2:13908042-13908061 | Msa1235730:CDS | 60.0% | |
| ACAGACCGCAGGCCAGGCTT+AGG | - | chr8_2:13908039-13908058 | None:intergenic | 65.0% | |
| ACAGACCGCAGGCCAGGCTT+AGG | - | chr8_2:13908039-13908058 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 13907335 | 13908104 | 13907335 | ID=Msa1235730;Name=Msa1235730 |
| chr8_2 | mRNA | 13907335 | 13908104 | 13907335 | ID=Msa1235730-mRNA-1;Parent=Msa1235730;Name=Msa1235730-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0|0|0.66|1|1|3|0|155 |
| chr8_2 | exon | 13907335 | 13907476 | 13907335 | ID=Msa1235730-mRNA-1:exon:5349;Parent=Msa1235730-mRNA-1 |
| chr8_2 | exon | 13907603 | 13907859 | 13907603 | ID=Msa1235730-mRNA-1:exon:5350;Parent=Msa1235730-mRNA-1 |
| chr8_2 | exon | 13908036 | 13908104 | 13908036 | ID=Msa1235730-mRNA-1:exon:5351;Parent=Msa1235730-mRNA-1 |
| chr8_2 | CDS | 13907335 | 13907476 | 13907335 | ID=Msa1235730-mRNA-1:cds;Parent=Msa1235730-mRNA-1 |
| chr8_2 | CDS | 13907603 | 13907859 | 13907603 | ID=Msa1235730-mRNA-1:cds;Parent=Msa1235730-mRNA-1 |
| chr8_2 | CDS | 13908036 | 13908104 | 13908036 | ID=Msa1235730-mRNA-1:cds;Parent=Msa1235730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
