Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238920 | XP_013444938.1 | 90.213 | 235 | 22 | 1 | 1 | 234 | 1 | 235 | 1.43e-139 | 403 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238920 | sp|K4BIZ9|WRK70_SOLLC | 36.364 | 176 | 100 | 4 | 5 | 177 | 10 | 176 | 1.00e-27 | 109 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa1238920 | TF | WRKY |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238920 | MtrunA17_Chr8g0350621 | 62.605 | 238 | 70 | 8 | 1 | 234 | 1 | 223 | 1.27e-96 | 283 |
| Msa1238920 | MtrunA17_Chr8g0350641 | 88.489 | 139 | 15 | 1 | 1 | 138 | 1 | 139 | 5.12e-79 | 234 |
| Msa1238920 | MtrunA17_Chr8g0334541 | 54.460 | 213 | 74 | 8 | 7 | 214 | 4 | 198 | 4.80e-67 | 208 |
| Msa1238920 | MtrunA17_Chr7g0244981 | 48.372 | 215 | 98 | 7 | 7 | 215 | 13 | 220 | 3.41e-62 | 196 |
| Msa1238920 | MtrunA17_Chr7g0244971 | 48.131 | 214 | 98 | 7 | 7 | 214 | 14 | 220 | 3.47e-62 | 196 |
| Msa1238920 | MtrunA17_Chr8g0350631 | 92.708 | 96 | 7 | 0 | 139 | 234 | 5 | 100 | 4.67e-55 | 173 |
| Msa1238920 | MtrunA17_Chr2g0315371 | 40.000 | 220 | 107 | 7 | 4 | 201 | 11 | 227 | 6.67e-44 | 149 |
| Msa1238920 | MtrunA17_Chr2g0315381 | 40.078 | 257 | 121 | 11 | 7 | 234 | 13 | 265 | 1.65e-39 | 138 |
| Msa1238920 | MtrunA17_Chr2g0315361 | 37.903 | 248 | 112 | 9 | 4 | 217 | 11 | 250 | 1.35e-37 | 133 |
| Msa1238920 | MtrunA17_Chr5g0428351 | 36.207 | 174 | 91 | 5 | 9 | 181 | 92 | 246 | 3.90e-26 | 103 |
| Msa1238920 | MtrunA17_Chr3g0128671 | 38.095 | 189 | 98 | 6 | 14 | 192 | 23 | 202 | 5.38e-26 | 103 |
| Msa1238920 | MtrunA17_Chr3g0126391 | 30.208 | 192 | 104 | 8 | 9 | 177 | 8 | 192 | 1.66e-17 | 80.1 |
| Msa1238920 | MtrunA17_Chr7g0275531 | 30.435 | 184 | 94 | 7 | 9 | 177 | 13 | 177 | 5.74e-17 | 78.6 |
| Msa1238920 | MtrunA17_Chr8g0387981 | 26.000 | 200 | 104 | 6 | 5 | 177 | 9 | 191 | 1.27e-15 | 75.1 |
| Msa1238920 | MtrunA17_Chr2g0315401 | 50.000 | 74 | 33 | 3 | 146 | 217 | 19 | 90 | 1.63e-15 | 71.2 |
| Msa1238920 | MtrunA17_Chr8g0347251 | 48.333 | 60 | 31 | 0 | 118 | 177 | 136 | 195 | 4.85e-15 | 73.2 |
| Msa1238920 | MtrunA17_Chr2g0315341 | 52.308 | 65 | 27 | 3 | 155 | 217 | 2 | 64 | 1.69e-13 | 65.5 |
| Msa1238920 | MtrunA17_Chr5g0443131 | 51.724 | 58 | 25 | 1 | 118 | 175 | 157 | 211 | 1.77e-13 | 68.6 |
| Msa1238920 | MtrunA17_Chr4g0051881 | 41.111 | 90 | 44 | 3 | 118 | 207 | 178 | 258 | 6.26e-13 | 67.0 |
| Msa1238920 | MtrunA17_Chr5g0418781 | 41.111 | 90 | 43 | 4 | 118 | 204 | 124 | 206 | 9.21e-13 | 66.2 |
| Msa1238920 | MtrunA17_Chr7g0270191 | 48.485 | 66 | 28 | 2 | 118 | 183 | 145 | 204 | 2.31e-12 | 65.1 |
| Msa1238920 | MtrunA17_Chr3g0129321 | 48.276 | 58 | 27 | 1 | 118 | 175 | 118 | 172 | 8.52e-12 | 62.4 |
| Msa1238920 | MtrunA17_Chr1g0194481 | 39.286 | 84 | 46 | 2 | 95 | 176 | 133 | 213 | 1.01e-11 | 63.5 |
| Msa1238920 | MtrunA17_Chr7g0224801 | 47.458 | 59 | 28 | 1 | 118 | 176 | 93 | 148 | 1.73e-11 | 60.8 |
| Msa1238920 | MtrunA17_Chr5g0401821 | 35.789 | 95 | 49 | 3 | 89 | 175 | 164 | 254 | 2.51e-11 | 62.0 |
| Msa1238920 | MtrunA17_Chr8g0383351 | 41.538 | 65 | 35 | 1 | 112 | 176 | 154 | 215 | 3.44e-11 | 61.2 |
| Msa1238920 | MtrunA17_Chr2g0294231 | 47.458 | 59 | 28 | 1 | 118 | 176 | 203 | 258 | 3.54e-11 | 62.4 |
| Msa1238920 | MtrunA17_Chr4g0071521 | 39.535 | 86 | 40 | 4 | 98 | 175 | 219 | 300 | 4.04e-11 | 61.6 |
| Msa1238920 | MtrunA17_Chr4g0068541 | 44.828 | 58 | 29 | 1 | 118 | 175 | 208 | 262 | 5.05e-11 | 62.0 |
| Msa1238920 | MtrunA17_Chr7g0238921 | 50.000 | 58 | 26 | 1 | 118 | 175 | 124 | 178 | 5.69e-11 | 61.2 |
| Msa1238920 | MtrunA17_Chr1g0150801 | 49.153 | 59 | 27 | 1 | 118 | 176 | 102 | 157 | 8.92e-11 | 58.9 |
| Msa1238920 | MtrunA17_Chr5g0418191 | 40.000 | 85 | 45 | 2 | 91 | 175 | 296 | 374 | 9.79e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238920 | AT3G56400.1 | 30.108 | 186 | 101 | 4 | 6 | 177 | 9 | 179 | 6.93e-23 | 94.7 |
| Msa1238920 | AT5G22570.1 | 31.148 | 183 | 116 | 3 | 5 | 187 | 7 | 179 | 7.94e-23 | 94.4 |
| Msa1238920 | AT5G01900.1 | 33.523 | 176 | 99 | 5 | 7 | 177 | 7 | 169 | 1.01e-22 | 93.6 |
| Msa1238920 | AT2G46400.1 | 32.022 | 178 | 107 | 6 | 9 | 183 | 3 | 169 | 2.13e-22 | 93.6 |
| Msa1238920 | AT1G66560.1 | 34.104 | 173 | 92 | 4 | 8 | 177 | 9 | 162 | 1.71e-21 | 90.1 |
| Msa1238920 | AT1G66550.2 | 30.542 | 203 | 114 | 5 | 7 | 206 | 8 | 186 | 2.81e-21 | 89.4 |
| Msa1238920 | AT1G66600.1 | 33.918 | 171 | 97 | 5 | 7 | 177 | 8 | 162 | 5.74e-21 | 88.6 |
| Msa1238920 | AT1G66550.1 | 30.583 | 206 | 115 | 5 | 7 | 206 | 8 | 191 | 6.34e-21 | 88.6 |
| Msa1238920 | AT1G80590.1 | 32.164 | 171 | 82 | 4 | 7 | 177 | 8 | 144 | 9.75e-21 | 87.8 |
| Msa1238920 | AT2G40750.1 | 27.053 | 207 | 106 | 4 | 7 | 177 | 14 | 211 | 2.83e-20 | 88.6 |
| Msa1238920 | AT4G11070.1 | 28.283 | 198 | 119 | 5 | 9 | 184 | 12 | 208 | 2.32e-18 | 82.8 |
| Msa1238920 | AT5G24110.1 | 27.143 | 210 | 117 | 6 | 1 | 192 | 1 | 192 | 1.93e-15 | 74.3 |
| Msa1238920 | AT4G11070.2 | 30.055 | 183 | 103 | 6 | 9 | 184 | 12 | 176 | 6.13e-14 | 70.1 |
| Msa1238920 | AT2G40740.1 | 45.833 | 72 | 38 | 1 | 112 | 183 | 168 | 238 | 1.39e-13 | 68.9 |
| Msa1238920 | AT2G40740.3 | 45.833 | 72 | 38 | 1 | 112 | 183 | 177 | 247 | 1.57e-13 | 68.9 |
| Msa1238920 | AT4G23810.1 | 40.698 | 86 | 44 | 2 | 99 | 177 | 132 | 217 | 1.57e-13 | 69.3 |
| Msa1238920 | AT1G29860.1 | 36.190 | 105 | 57 | 2 | 102 | 199 | 120 | 221 | 8.56e-13 | 66.6 |
| Msa1238920 | AT5G49520.1 | 37.037 | 135 | 54 | 5 | 118 | 239 | 221 | 337 | 1.01e-12 | 67.4 |
| Msa1238920 | AT1G13960.1 | 36.937 | 111 | 63 | 3 | 66 | 175 | 359 | 463 | 1.53e-12 | 67.0 |
| Msa1238920 | AT4G18170.1 | 51.724 | 58 | 25 | 1 | 118 | 175 | 172 | 226 | 3.32e-12 | 65.5 |
| Msa1238920 | AT1G13960.2 | 36.937 | 111 | 63 | 3 | 66 | 175 | 206 | 310 | 6.06e-12 | 64.7 |
| Msa1238920 | AT1G69310.4 | 34.884 | 129 | 52 | 6 | 118 | 218 | 147 | 271 | 7.85e-12 | 63.9 |
| Msa1238920 | AT1G69310.2 | 34.884 | 129 | 52 | 6 | 118 | 218 | 147 | 271 | 7.85e-12 | 63.9 |
| Msa1238920 | AT1G69310.1 | 34.884 | 129 | 52 | 6 | 118 | 218 | 147 | 271 | 7.85e-12 | 63.9 |
| Msa1238920 | AT5G46350.1 | 47.761 | 67 | 30 | 2 | 111 | 175 | 174 | 237 | 9.08e-12 | 64.3 |
| Msa1238920 | AT2G37260.1 | 33.607 | 122 | 60 | 4 | 88 | 197 | 307 | 419 | 9.88e-12 | 64.3 |
| Msa1238920 | AT2G37260.2 | 33.607 | 122 | 60 | 4 | 88 | 197 | 225 | 337 | 1.41e-11 | 63.5 |
| Msa1238920 | AT2G37260.3 | 33.607 | 122 | 60 | 4 | 88 | 197 | 227 | 339 | 1.43e-11 | 63.5 |
| Msa1238920 | AT5G26170.1 | 45.312 | 64 | 32 | 1 | 112 | 175 | 107 | 167 | 2.17e-11 | 61.2 |
| Msa1238920 | AT5G64810.1 | 31.646 | 158 | 87 | 7 | 41 | 182 | 19 | 171 | 2.74e-11 | 61.2 |
| Msa1238920 | AT3G62340.1 | 45.455 | 77 | 35 | 3 | 118 | 194 | 118 | 187 | 3.95e-11 | 62.0 |
| Msa1238920 | AT2G03340.1 | 36.735 | 98 | 56 | 2 | 78 | 175 | 378 | 469 | 4.24e-11 | 62.8 |
| Msa1238920 | AT2G46130.1 | 46.552 | 58 | 28 | 1 | 118 | 175 | 30 | 84 | 4.52e-11 | 58.5 |
| Msa1238920 | AT2G47260.1 | 40.000 | 80 | 43 | 2 | 99 | 176 | 153 | 229 | 9.63e-11 | 61.2 |
Find 43 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTTTGCTCATGAGAAAT+AGG | 0.194845 | 8_2:+19877590 | None:intergenic |
| TATGCACATGCTTGGTTGTT+AGG | 0.241140 | 8_2:+19875692 | None:intergenic |
| ATTAATTCTCGCCTTAAGTA+TGG | 0.286370 | 8_2:+19877075 | None:intergenic |
| GTTATTAAAGCTAAATAATA+AGG | 0.301902 | 8_2:+19875564 | None:intergenic |
| ACAAGTGTGGTGACCATAAT+AGG | 0.313678 | 8_2:+19875636 | None:intergenic |
| ATATGATGGTGATGACAAAA+AGG | 0.316699 | 8_2:+19875510 | None:intergenic |
| TTGTATAAGACAACCTATTA+TGG | 0.320161 | 8_2:-19875649 | Msa1238920:CDS |
| GGGCATCAATGGAGAAAATA+TGG | 0.334994 | 8_2:-19877120 | Msa1238920:CDS |
| TTCTTTGCTCATGAGAAATA+GGG | 0.390076 | 8_2:+19877591 | None:intergenic |
| AATAAGGAAGAAGTGTCATT+AGG | 0.410992 | 8_2:+19875580 | None:intergenic |
| TCAACAATTCTCCATACTTA+AGG | 0.425227 | 8_2:-19877086 | Msa1238920:intron |
| CAGATGATGATGGGCATCAA+TGG | 0.436426 | 8_2:-19877131 | Msa1238920:CDS |
| GGGCAGGTTAGTATCATCTA+AGG | 0.437756 | 8_2:+19875434 | None:intergenic |
| AATGGAGAAGTATCACATAA+AGG | 0.439739 | 8_2:-19877758 | Msa1238920:CDS |
| AGATCTAACTACTGGACTAA+TGG | 0.445611 | 8_2:+19877534 | None:intergenic |
| CCCTACTGACCAAATTCAAA+AGG | 0.468673 | 8_2:-19877566 | Msa1238920:CDS |
| TTAGGATCAAGTATGATGTC+AGG | 0.478604 | 8_2:+19875598 | None:intergenic |
| TTGAATTCTATGCACATGCT+TGG | 0.487749 | 8_2:+19875684 | None:intergenic |
| TCAAGTATGATGTCAGGGTT+GGG | 0.501399 | 8_2:+19875604 | None:intergenic |
| AAATCGACAGATCTAACTAC+TGG | 0.502751 | 8_2:+19877526 | None:intergenic |
| ATCAAGTATGATGTCAGGGT+TGG | 0.507868 | 8_2:+19875603 | None:intergenic |
| CTAGAGGATGTAACAAAAGA+AGG | 0.518642 | 8_2:-19877474 | Msa1238920:intron |
| GCAGAAACATTGCACAAACA+TGG | 0.529226 | 8_2:-19877176 | Msa1238920:intron |
| GAAACTCCAACAGATGATGA+TGG | 0.529624 | 8_2:-19877141 | Msa1238920:CDS |
| GAAGTATCACATAAAGGCAA+TGG | 0.530517 | 8_2:-19877752 | Msa1238920:CDS |
| TCACATAAAGGCAATGGAAG+AGG | 0.530916 | 8_2:-19877746 | Msa1238920:CDS |
| TAATAGGTTGTCTTATACAA+GGG | 0.532237 | 8_2:+19875652 | None:intergenic |
| TCTTTCTTCATCACATTCAG+AGG | 0.537015 | 8_2:-19875488 | Msa1238920:CDS |
| TGATGCCCATCATCATCTGT+TGG | 0.549449 | 8_2:+19877135 | None:intergenic |
| TATTATGGTCACCACACTTG+TGG | 0.557212 | 8_2:-19875634 | Msa1238920:CDS |
| ATATATGCAGGAACTACTAC+AGG | 0.562723 | 8_2:-19875741 | Msa1238920:intron |
| TGTGATGAAGAAAGATATGA+TGG | 0.572189 | 8_2:+19875496 | None:intergenic |
| GTATCATCTAAGGTTGATGA+AGG | 0.574597 | 8_2:+19875444 | None:intergenic |
| ATAATAGGTTGTCTTATACA+AGG | 0.590401 | 8_2:+19875651 | None:intergenic |
| TAGGATCAAGTATGATGTCA+GGG | 0.598125 | 8_2:+19875599 | None:intergenic |
| CAGAAACATTGCACAAACAT+GGG | 0.600489 | 8_2:-19877175 | Msa1238920:CDS |
| AAACTCCAACAGATGATGAT+GGG | 0.602197 | 8_2:-19877140 | Msa1238920:CDS |
| TAGGTTGTCTTATACAAGGG+AGG | 0.608017 | 8_2:+19875655 | None:intergenic |
| CAATGGAAGAGGTTATGAGA+GGG | 0.615112 | 8_2:-19877735 | Msa1238920:CDS |
| GCAATGGAAGAGGTTATGAG+AGG | 0.616096 | 8_2:-19877736 | Msa1238920:CDS |
| TGGGCAAGTTTCCACAAGTG+TGG | 0.623696 | 8_2:+19875623 | None:intergenic |
| CATTGCACAAACATGGGAGA+AGG | 0.634829 | 8_2:-19877169 | Msa1238920:CDS |
| AAGAGTACTTCTGCAACTAG+AGG | 0.644488 | 8_2:-19877490 | Msa1238920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAATCTCAAATAAATT+TGG | + | chr8_2:19876220-19876239 | None:intergenic | 10.0% |
| !!! | TATTTGAGATTTATTTAATT+TGG | - | chr8_2:19876224-19876243 | Msa1238920:intron | 10.0% |
| !! | AAATAAATCTCAAATAAATT+TGG | + | chr8_2:19876220-19876239 | None:intergenic | 10.0% |
| !!! | TATTTGAGATTTATTTAATT+TGG | - | chr8_2:19876224-19876243 | Msa1238920:intron | 10.0% |
| !!! | GCATATATGTTTTTTTTTTA+AGG | - | chr8_2:19876270-19876289 | Msa1238920:intron | 15.0% |
| !!! | ATAATTATTTGAAATTTGAG+AGG | + | chr8_2:19876368-19876387 | None:intergenic | 15.0% |
| !! | AAAACAATGTAACATAATAA+GGG | + | chr8_2:19876401-19876420 | None:intergenic | 15.0% |
| !! | AAAAACAATGTAACATAATA+AGG | + | chr8_2:19876402-19876421 | None:intergenic | 15.0% |
| !! | GATTTATTTATTTACTCTTA+AGG | + | chr8_2:19876473-19876492 | None:intergenic | 15.0% |
| !! | TTCATTAAAATAAAGAAAGT+TGG | + | chr8_2:19876569-19876588 | None:intergenic | 15.0% |
| !! | GGAAATTAATTTCTTATATT+AGG | - | chr8_2:19877102-19877121 | Msa1238920:CDS | 15.0% |
| !! | TAATTTCTTATATTAGGTTA+TGG | - | chr8_2:19877108-19877127 | Msa1238920:CDS | 15.0% |
| !!! | AATGAAAAAAGAAAATTTTC+CGG | + | chr8_2:19877172-19877191 | None:intergenic | 15.0% |
| !! | TTAAAAAAATTATTGCACTA+AGG | - | chr8_2:19877190-19877209 | Msa1238920:intron | 15.0% |
| !! | AAAAAAAAATTAGAACCAAA+AGG | + | chr8_2:19877430-19877449 | None:intergenic | 15.0% |
| !! | GTTATTAAAGCTAAATAATA+AGG | + | chr8_2:19877643-19877662 | None:intergenic | 15.0% |
| !!! | GCATATATGTTTTTTTTTTA+AGG | - | chr8_2:19876270-19876289 | Msa1238920:intron | 15.0% |
| !!! | ATAATTATTTGAAATTTGAG+AGG | + | chr8_2:19876368-19876387 | None:intergenic | 15.0% |
| !! | AAAACAATGTAACATAATAA+GGG | + | chr8_2:19876401-19876420 | None:intergenic | 15.0% |
| !! | AAAAACAATGTAACATAATA+AGG | + | chr8_2:19876402-19876421 | None:intergenic | 15.0% |
| !! | GATTTATTTATTTACTCTTA+AGG | + | chr8_2:19876473-19876492 | None:intergenic | 15.0% |
| !! | TTCATTAAAATAAAGAAAGT+TGG | + | chr8_2:19876569-19876588 | None:intergenic | 15.0% |
| !! | GGAAATTAATTTCTTATATT+AGG | - | chr8_2:19877102-19877121 | Msa1238920:CDS | 15.0% |
| !! | TAATTTCTTATATTAGGTTA+TGG | - | chr8_2:19877108-19877127 | Msa1238920:CDS | 15.0% |
| !!! | AATGAAAAAAGAAAATTTTC+CGG | + | chr8_2:19877172-19877191 | None:intergenic | 15.0% |
| !! | TTAAAAAAATTATTGCACTA+AGG | - | chr8_2:19877190-19877209 | Msa1238920:intron | 15.0% |
| !! | AAAAAAAAATTAGAACCAAA+AGG | + | chr8_2:19877430-19877449 | None:intergenic | 15.0% |
| !! | GTTATTAAAGCTAAATAATA+AGG | + | chr8_2:19877643-19877662 | None:intergenic | 15.0% |
| !! | ATAAGGACCTTAAATAATTT+GGG | + | chr8_2:19875895-19875914 | None:intergenic | 20.0% |
| !! | TATAAGGACCTTAAATAATT+TGG | + | chr8_2:19875896-19875915 | None:intergenic | 20.0% |
| !!! | TTCCATAATTAGTTTTAGAA+TGG | - | chr8_2:19875971-19875990 | Msa1238920:intron | 20.0% |
| !!! | ATCCATTCTAAAACTAATTA+TGG | + | chr8_2:19875976-19875995 | None:intergenic | 20.0% |
| !! | AAATCTCAAATAAATTTGGT+GGG | + | chr8_2:19876216-19876235 | None:intergenic | 20.0% |
| !! | TAAATCTCAAATAAATTTGG+TGG | + | chr8_2:19876217-19876236 | None:intergenic | 20.0% |
| !! | TATGCTTTATAAATTCACTT+GGG | + | chr8_2:19876255-19876274 | None:intergenic | 20.0% |
| !! | ATATGCTTTATAAATTCACT+TGG | + | chr8_2:19876256-19876275 | None:intergenic | 20.0% |
| !! | TGGAAAAATATTTGTATATG+CGG | - | chr8_2:19876615-19876634 | Msa1238920:intron | 20.0% |
| !! | AAGTATGAATGACATTTAAA+GGG | + | chr8_2:19876965-19876984 | None:intergenic | 20.0% |
| !! | AAAGTATGAATGACATTTAA+AGG | + | chr8_2:19876966-19876985 | None:intergenic | 20.0% |
| !! | TGATTAATCTAATCTATTTG+GGG | + | chr8_2:19877073-19877092 | None:intergenic | 20.0% |
| !! | CTGATTAATCTAATCTATTT+GGG | + | chr8_2:19877074-19877093 | None:intergenic | 20.0% |
| !! | TCTGATTAATCTAATCTATT+TGG | + | chr8_2:19877075-19877094 | None:intergenic | 20.0% |
| !! | AGATTAGATTAATCAGAAAA+TGG | - | chr8_2:19877078-19877097 | Msa1238920:intron | 20.0% |
| !! | AACAAATTAATAAAGAGTGA+AGG | + | chr8_2:19877396-19877415 | None:intergenic | 20.0% |
| !! | ATAAGGACCTTAAATAATTT+GGG | + | chr8_2:19875895-19875914 | None:intergenic | 20.0% |
| !! | TATAAGGACCTTAAATAATT+TGG | + | chr8_2:19875896-19875915 | None:intergenic | 20.0% |
| !!! | TTCCATAATTAGTTTTAGAA+TGG | - | chr8_2:19875971-19875990 | Msa1238920:intron | 20.0% |
| !!! | ATCCATTCTAAAACTAATTA+TGG | + | chr8_2:19875976-19875995 | None:intergenic | 20.0% |
| !! | AAATCTCAAATAAATTTGGT+GGG | + | chr8_2:19876216-19876235 | None:intergenic | 20.0% |
| !! | TAAATCTCAAATAAATTTGG+TGG | + | chr8_2:19876217-19876236 | None:intergenic | 20.0% |
| !! | TATGCTTTATAAATTCACTT+GGG | + | chr8_2:19876255-19876274 | None:intergenic | 20.0% |
| !! | ATATGCTTTATAAATTCACT+TGG | + | chr8_2:19876256-19876275 | None:intergenic | 20.0% |
| !! | TGGAAAAATATTTGTATATG+CGG | - | chr8_2:19876615-19876634 | Msa1238920:intron | 20.0% |
| !! | AAGTATGAATGACATTTAAA+GGG | + | chr8_2:19876965-19876984 | None:intergenic | 20.0% |
| !! | AAAGTATGAATGACATTTAA+AGG | + | chr8_2:19876966-19876985 | None:intergenic | 20.0% |
| !! | TGATTAATCTAATCTATTTG+GGG | + | chr8_2:19877073-19877092 | None:intergenic | 20.0% |
| !! | CTGATTAATCTAATCTATTT+GGG | + | chr8_2:19877074-19877093 | None:intergenic | 20.0% |
| !! | TCTGATTAATCTAATCTATT+TGG | + | chr8_2:19877075-19877094 | None:intergenic | 20.0% |
| !! | AGATTAGATTAATCAGAAAA+TGG | - | chr8_2:19877078-19877097 | Msa1238920:intron | 20.0% |
| !! | AACAAATTAATAAAGAGTGA+AGG | + | chr8_2:19877396-19877415 | None:intergenic | 20.0% |
| !! | TTGAAAAGTCCTTTTGAATT+TGG | + | chr8_2:19875650-19875669 | None:intergenic | 25.0% |
| ! | GGCATATGCATTAAATTTAT+GGG | + | chr8_2:19875874-19875893 | None:intergenic | 25.0% |
| !! | GGTCCTTATACATATATTTT+AGG | - | chr8_2:19875906-19875925 | Msa1238920:intron | 25.0% |
| ! | CAGCCTAAAATATATGTATA+AGG | + | chr8_2:19875912-19875931 | None:intergenic | 25.0% |
| !! | TTTTAGCGCATTCATATTAT+TGG | - | chr8_2:19876180-19876199 | Msa1238920:intron | 25.0% |
| !!! | CACTAATTTTTTTTCTCTAC+AGG | - | chr8_2:19876339-19876358 | Msa1238920:intron | 25.0% |
| ! | GGAAAAATATTTGTATATGC+GGG | - | chr8_2:19876616-19876635 | Msa1238920:intron | 25.0% |
| ! | AAAACTCATTAAATTGGAGT+GGG | + | chr8_2:19876654-19876673 | None:intergenic | 25.0% |
| !!! | GTACTCGTATTTTAAAATGA+GGG | + | chr8_2:19876677-19876696 | None:intergenic | 25.0% |
| !!! | CTCATTTTAAAATACGAGTA+CGG | - | chr8_2:19876676-19876695 | Msa1238920:intron | 25.0% |
| !!! | TCATTTTAAAATACGAGTAC+GGG | - | chr8_2:19876677-19876696 | Msa1238920:intron | 25.0% |
| ! | CATTTAAAGGGATAATACTT+TGG | + | chr8_2:19876953-19876972 | None:intergenic | 25.0% |
| !! | ATATACTGTGAACATTTTCT+AGG | - | chr8_2:19877006-19877025 | Msa1238920:intron | 25.0% |
| ! | TTAGATTAATCAGAAAATGG+TGG | - | chr8_2:19877081-19877100 | Msa1238920:intron | 25.0% |
| ! | TCTTATATTAGGTTATGGTT+TGG | - | chr8_2:19877113-19877132 | Msa1238920:CDS | 25.0% |
| ! | CTTATATTAGGTTATGGTTT+GGG | - | chr8_2:19877114-19877133 | Msa1238920:CDS | 25.0% |
| ! | AAAAAATTATTGCACTAAGG+AGG | - | chr8_2:19877193-19877212 | Msa1238920:intron | 25.0% |
| ! | TGTAACTATATTTAAAGACG+AGG | - | chr8_2:19877296-19877315 | Msa1238920:intron | 25.0% |
| ! | TTAGAACCAAAAGGATTATT+GGG | + | chr8_2:19877421-19877440 | None:intergenic | 25.0% |
| ! | ATTAGAACCAAAAGGATTAT+TGG | + | chr8_2:19877422-19877441 | None:intergenic | 25.0% |
| ! | TAATAGGTTGTCTTATACAA+GGG | + | chr8_2:19877555-19877574 | None:intergenic | 25.0% |
| ! | ATAATAGGTTGTCTTATACA+AGG | + | chr8_2:19877556-19877575 | None:intergenic | 25.0% |
| ! | TTGTATAAGACAACCTATTA+TGG | - | chr8_2:19877555-19877574 | Msa1238920:CDS | 25.0% |
| !! | TTGAAAAGTCCTTTTGAATT+TGG | + | chr8_2:19875650-19875669 | None:intergenic | 25.0% |
| ! | GGCATATGCATTAAATTTAT+GGG | + | chr8_2:19875874-19875893 | None:intergenic | 25.0% |
| !! | GGTCCTTATACATATATTTT+AGG | - | chr8_2:19875906-19875925 | Msa1238920:intron | 25.0% |
| ! | CAGCCTAAAATATATGTATA+AGG | + | chr8_2:19875912-19875931 | None:intergenic | 25.0% |
| !! | TTTTAGCGCATTCATATTAT+TGG | - | chr8_2:19876180-19876199 | Msa1238920:intron | 25.0% |
| !!! | CACTAATTTTTTTTCTCTAC+AGG | - | chr8_2:19876339-19876358 | Msa1238920:intron | 25.0% |
| ! | GGAAAAATATTTGTATATGC+GGG | - | chr8_2:19876616-19876635 | Msa1238920:intron | 25.0% |
| ! | AAAACTCATTAAATTGGAGT+GGG | + | chr8_2:19876654-19876673 | None:intergenic | 25.0% |
| !!! | GTACTCGTATTTTAAAATGA+GGG | + | chr8_2:19876677-19876696 | None:intergenic | 25.0% |
| !!! | CTCATTTTAAAATACGAGTA+CGG | - | chr8_2:19876676-19876695 | Msa1238920:intron | 25.0% |
| !!! | TCATTTTAAAATACGAGTAC+GGG | - | chr8_2:19876677-19876696 | Msa1238920:intron | 25.0% |
| ! | CATTTAAAGGGATAATACTT+TGG | + | chr8_2:19876953-19876972 | None:intergenic | 25.0% |
| !! | ATATACTGTGAACATTTTCT+AGG | - | chr8_2:19877006-19877025 | Msa1238920:intron | 25.0% |
| ! | TTAGATTAATCAGAAAATGG+TGG | - | chr8_2:19877081-19877100 | Msa1238920:intron | 25.0% |
| ! | TCTTATATTAGGTTATGGTT+TGG | - | chr8_2:19877113-19877132 | Msa1238920:CDS | 25.0% |
| ! | CTTATATTAGGTTATGGTTT+GGG | - | chr8_2:19877114-19877133 | Msa1238920:CDS | 25.0% |
| ! | AAAAAATTATTGCACTAAGG+AGG | - | chr8_2:19877193-19877212 | Msa1238920:intron | 25.0% |
| ! | TGTAACTATATTTAAAGACG+AGG | - | chr8_2:19877296-19877315 | Msa1238920:intron | 25.0% |
| ! | TTAGAACCAAAAGGATTATT+GGG | + | chr8_2:19877421-19877440 | None:intergenic | 25.0% |
| ! | ATTAGAACCAAAAGGATTAT+TGG | + | chr8_2:19877422-19877441 | None:intergenic | 25.0% |
| ! | TAATAGGTTGTCTTATACAA+GGG | + | chr8_2:19877555-19877574 | None:intergenic | 25.0% |
| ! | ATAATAGGTTGTCTTATACA+AGG | + | chr8_2:19877556-19877575 | None:intergenic | 25.0% |
| ! | TTGTATAAGACAACCTATTA+TGG | - | chr8_2:19877555-19877574 | Msa1238920:CDS | 25.0% |
| TTCTTTGCTCATGAGAAATA+GGG | + | chr8_2:19875616-19875635 | None:intergenic | 30.0% | |
| TTTCTTTGCTCATGAGAAAT+AGG | + | chr8_2:19875617-19875636 | None:intergenic | 30.0% | |
| GGGCATATGCATTAAATTTA+TGG | + | chr8_2:19875875-19875894 | None:intergenic | 30.0% | |
| GCATATGCCCAAATTATTTA+AGG | - | chr8_2:19875885-19875904 | Msa1238920:intron | 30.0% | |
| TCAACAATTCTCCATACTTA+AGG | - | chr8_2:19876118-19876137 | Msa1238920:intron | 30.0% | |
| ATTAATTCTCGCCTTAAGTA+TGG | + | chr8_2:19876132-19876151 | None:intergenic | 30.0% | |
| ! | GGATAATTTAGAGAGTATGT+TGG | - | chr8_2:19876291-19876310 | Msa1238920:intron | 30.0% |
| CAATGTAACATAATAAGGGA+TGG | + | chr8_2:19876397-19876416 | None:intergenic | 30.0% | |
| ATGAAAGAGATCCCATATTT+AGG | - | chr8_2:19876584-19876603 | Msa1238920:intron | 30.0% | |
| GAAAACTCATTAAATTGGAG+TGG | + | chr8_2:19876655-19876674 | None:intergenic | 30.0% | |
| TGAGGGAAAACTCATTAAAT+TGG | + | chr8_2:19876660-19876679 | None:intergenic | 30.0% | |
| !!! | CGTACTCGTATTTTAAAATG+AGG | + | chr8_2:19876678-19876697 | None:intergenic | 30.0% |
| ATGGGTAACATGGATATAAT+CGG | - | chr8_2:19876700-19876719 | Msa1238920:intron | 30.0% | |
| GCTATCATGTTGCATATTAA+TGG | + | chr8_2:19876758-19876777 | None:intergenic | 30.0% | |
| CAACATGATAGCCTTTAAAT+GGG | - | chr8_2:19876766-19876785 | Msa1238920:intron | 30.0% | |
| AACATGATAGCCTTTAAATG+GGG | - | chr8_2:19876767-19876786 | Msa1238920:intron | 30.0% | |
| TTGTAATTGACAAGTACACA+TGG | - | chr8_2:19877030-19877049 | Msa1238920:intron | 30.0% | |
| ! | TATGGTTTGGGTTATGAATT+TGG | - | chr8_2:19877126-19877145 | Msa1238920:CDS | 30.0% |
| ! | ATGGTTTGGGTTATGAATTT+GGG | - | chr8_2:19877127-19877146 | Msa1238920:CDS | 30.0% |
| ! | TATGAATTTGGGTTTGTGTT+TGG | - | chr8_2:19877138-19877157 | Msa1238920:CDS | 30.0% |
| ! | ATGAATTTGGGTTTGTGTTT+GGG | - | chr8_2:19877139-19877158 | Msa1238920:CDS | 30.0% |
| ACTATATTTAAAGACGAGGA+TGG | - | chr8_2:19877300-19877319 | Msa1238920:intron | 30.0% | |
| CTATATTTAAAGACGAGGAT+GGG | - | chr8_2:19877301-19877320 | Msa1238920:intron | 30.0% | |
| ! | TGTTTTCCCAATAATCCTTT+TGG | - | chr8_2:19877412-19877431 | Msa1238920:intron | 30.0% |
| CTGCATATATCAAATTGGAT+AGG | + | chr8_2:19877453-19877472 | None:intergenic | 30.0% | |
| CTATCCAATTTGATATATGC+AGG | - | chr8_2:19877451-19877470 | Msa1238920:intron | 30.0% | |
| AGTTCCTGCATATATCAAAT+TGG | + | chr8_2:19877458-19877477 | None:intergenic | 30.0% | |
| !! | AATAAGGAAGAAGTGTCATT+AGG | + | chr8_2:19877627-19877646 | None:intergenic | 30.0% |
| !!! | ATTCTTGTTTTGTTGGAGTT+GGG | + | chr8_2:19877671-19877690 | None:intergenic | 30.0% |
| ! | TATGATGGTGATGACAAAAA+GGG | + | chr8_2:19877696-19877715 | None:intergenic | 30.0% |
| ! | ATATGATGGTGATGACAAAA+AGG | + | chr8_2:19877697-19877716 | None:intergenic | 30.0% |
| TGTGATGAAGAAAGATATGA+TGG | + | chr8_2:19877711-19877730 | None:intergenic | 30.0% | |
| TTCTTTGCTCATGAGAAATA+GGG | + | chr8_2:19875616-19875635 | None:intergenic | 30.0% | |
| TTTCTTTGCTCATGAGAAAT+AGG | + | chr8_2:19875617-19875636 | None:intergenic | 30.0% | |
| GGGCATATGCATTAAATTTA+TGG | + | chr8_2:19875875-19875894 | None:intergenic | 30.0% | |
| GCATATGCCCAAATTATTTA+AGG | - | chr8_2:19875885-19875904 | Msa1238920:intron | 30.0% | |
| TCAACAATTCTCCATACTTA+AGG | - | chr8_2:19876118-19876137 | Msa1238920:intron | 30.0% | |
| ATTAATTCTCGCCTTAAGTA+TGG | + | chr8_2:19876132-19876151 | None:intergenic | 30.0% | |
| ! | GGATAATTTAGAGAGTATGT+TGG | - | chr8_2:19876291-19876310 | Msa1238920:intron | 30.0% |
| CAATGTAACATAATAAGGGA+TGG | + | chr8_2:19876397-19876416 | None:intergenic | 30.0% | |
| ATGAAAGAGATCCCATATTT+AGG | - | chr8_2:19876584-19876603 | Msa1238920:intron | 30.0% | |
| GAAAACTCATTAAATTGGAG+TGG | + | chr8_2:19876655-19876674 | None:intergenic | 30.0% | |
| TGAGGGAAAACTCATTAAAT+TGG | + | chr8_2:19876660-19876679 | None:intergenic | 30.0% | |
| !!! | CGTACTCGTATTTTAAAATG+AGG | + | chr8_2:19876678-19876697 | None:intergenic | 30.0% |
| ATGGGTAACATGGATATAAT+CGG | - | chr8_2:19876700-19876719 | Msa1238920:intron | 30.0% | |
| GCTATCATGTTGCATATTAA+TGG | + | chr8_2:19876758-19876777 | None:intergenic | 30.0% | |
| CAACATGATAGCCTTTAAAT+GGG | - | chr8_2:19876766-19876785 | Msa1238920:intron | 30.0% | |
| AACATGATAGCCTTTAAATG+GGG | - | chr8_2:19876767-19876786 | Msa1238920:intron | 30.0% | |
| TTGTAATTGACAAGTACACA+TGG | - | chr8_2:19877030-19877049 | Msa1238920:intron | 30.0% | |
| ! | TATGGTTTGGGTTATGAATT+TGG | - | chr8_2:19877126-19877145 | Msa1238920:CDS | 30.0% |
| ! | ATGGTTTGGGTTATGAATTT+GGG | - | chr8_2:19877127-19877146 | Msa1238920:CDS | 30.0% |
| ! | TATGAATTTGGGTTTGTGTT+TGG | - | chr8_2:19877138-19877157 | Msa1238920:CDS | 30.0% |
| ! | ATGAATTTGGGTTTGTGTTT+GGG | - | chr8_2:19877139-19877158 | Msa1238920:CDS | 30.0% |
| ACTATATTTAAAGACGAGGA+TGG | - | chr8_2:19877300-19877319 | Msa1238920:intron | 30.0% | |
| CTATATTTAAAGACGAGGAT+GGG | - | chr8_2:19877301-19877320 | Msa1238920:intron | 30.0% | |
| ! | TGTTTTCCCAATAATCCTTT+TGG | - | chr8_2:19877412-19877431 | Msa1238920:intron | 30.0% |
| CTGCATATATCAAATTGGAT+AGG | + | chr8_2:19877453-19877472 | None:intergenic | 30.0% | |
| CTATCCAATTTGATATATGC+AGG | - | chr8_2:19877451-19877470 | Msa1238920:intron | 30.0% | |
| AGTTCCTGCATATATCAAAT+TGG | + | chr8_2:19877458-19877477 | None:intergenic | 30.0% | |
| !! | AATAAGGAAGAAGTGTCATT+AGG | + | chr8_2:19877627-19877646 | None:intergenic | 30.0% |
| !!! | ATTCTTGTTTTGTTGGAGTT+GGG | + | chr8_2:19877671-19877690 | None:intergenic | 30.0% |
| ! | TATGATGGTGATGACAAAAA+GGG | + | chr8_2:19877696-19877715 | None:intergenic | 30.0% |
| ! | ATATGATGGTGATGACAAAA+AGG | + | chr8_2:19877697-19877716 | None:intergenic | 30.0% |
| TGTGATGAAGAAAGATATGA+TGG | + | chr8_2:19877711-19877730 | None:intergenic | 30.0% | |
| ! | GAAGTATCACATAAAGGCAA+TGG | - | chr8_2:19875452-19875471 | Msa1238920:CDS | 35.0% |
| ! | CCTTTTGAATTTGGTCAGTA+GGG | + | chr8_2:19875641-19875660 | None:intergenic | 35.0% |
| ! | TCCTTTTGAATTTGGTCAGT+AGG | + | chr8_2:19875642-19875661 | None:intergenic | 35.0% |
| AGATCTAACTACTGGACTAA+TGG | + | chr8_2:19875673-19875692 | None:intergenic | 35.0% | |
| AAATCGACAGATCTAACTAC+TGG | + | chr8_2:19875681-19875700 | None:intergenic | 35.0% | |
| CTAGAGGATGTAACAAAAGA+AGG | - | chr8_2:19875730-19875749 | Msa1238920:CDS | 35.0% | |
| CAGAAACATTGCACAAACAT+GGG | - | chr8_2:19876029-19876048 | Msa1238920:intron | 35.0% | |
| AAACTCCAACAGATGATGAT+GGG | - | chr8_2:19876064-19876083 | Msa1238920:intron | 35.0% | |
| CCATACCTACTCCTAAATAT+GGG | + | chr8_2:19876598-19876617 | None:intergenic | 35.0% | |
| TCCATACCTACTCCTAAATA+TGG | + | chr8_2:19876599-19876618 | None:intergenic | 35.0% | |
| ! | CATTAAATTGGAGTGGGTTT+GGG | + | chr8_2:19876648-19876667 | None:intergenic | 35.0% |
| ! | TCATTAAATTGGAGTGGGTT+TGG | + | chr8_2:19876649-19876668 | None:intergenic | 35.0% |
| ! | TTTAAAATACGAGTACGGGA+TGG | - | chr8_2:19876681-19876700 | Msa1238920:intron | 35.0% |
| TTAAAATACGAGTACGGGAT+GGG | - | chr8_2:19876682-19876701 | Msa1238920:intron | 35.0% | |
| ATTCAAAACGTGTTCAGTGT+AGG | + | chr8_2:19876728-19876747 | None:intergenic | 35.0% | |
| GCAACATGATAGCCTTTAAA+TGG | - | chr8_2:19876765-19876784 | Msa1238920:intron | 35.0% | |
| GTATGGGTGACATTAAATCT+GGG | + | chr8_2:19876861-19876880 | None:intergenic | 35.0% | |
| TGTATGGGTGACATTAAATC+TGG | + | chr8_2:19876862-19876881 | None:intergenic | 35.0% | |
| ! | TGAATTTGGGTTTGTGTTTG+GGG | - | chr8_2:19877140-19877159 | Msa1238920:CDS | 35.0% |
| TTTCTCACCCCATCAAAAAT+CGG | - | chr8_2:19877262-19877281 | Msa1238920:intron | 35.0% | |
| ! | TACCTTACCCGATTTTTGAT+GGG | + | chr8_2:19877273-19877292 | None:intergenic | 35.0% |
| TGTAAAGCACGTGTCAATAA+TGG | + | chr8_2:19877360-19877379 | None:intergenic | 35.0% | |
| ATATATGCAGGAACTACTAC+AGG | - | chr8_2:19877463-19877482 | Msa1238920:intron | 35.0% | |
| TTGAATTCTATGCACATGCT+TGG | + | chr8_2:19877523-19877542 | None:intergenic | 35.0% | |
| TAGGATCAAGTATGATGTCA+GGG | + | chr8_2:19877608-19877627 | None:intergenic | 35.0% | |
| TTAGGATCAAGTATGATGTC+AGG | + | chr8_2:19877609-19877628 | None:intergenic | 35.0% | |
| !!! | CATTCTTGTTTTGTTGGAGT+TGG | + | chr8_2:19877672-19877691 | None:intergenic | 35.0% |
| !!! | AAGGGACATTCTTGTTTTGT+TGG | + | chr8_2:19877678-19877697 | None:intergenic | 35.0% |
| TCTTTCTTCATCACATTCAG+AGG | - | chr8_2:19877716-19877735 | Msa1238920:CDS | 35.0% | |
| ! | GAAGTATCACATAAAGGCAA+TGG | - | chr8_2:19875452-19875471 | Msa1238920:CDS | 35.0% |
| ! | CCTTTTGAATTTGGTCAGTA+GGG | + | chr8_2:19875641-19875660 | None:intergenic | 35.0% |
| ! | TCCTTTTGAATTTGGTCAGT+AGG | + | chr8_2:19875642-19875661 | None:intergenic | 35.0% |
| AGATCTAACTACTGGACTAA+TGG | + | chr8_2:19875673-19875692 | None:intergenic | 35.0% | |
| AAATCGACAGATCTAACTAC+TGG | + | chr8_2:19875681-19875700 | None:intergenic | 35.0% | |
| CTAGAGGATGTAACAAAAGA+AGG | - | chr8_2:19875730-19875749 | Msa1238920:CDS | 35.0% | |
| CAGAAACATTGCACAAACAT+GGG | - | chr8_2:19876029-19876048 | Msa1238920:intron | 35.0% | |
| AAACTCCAACAGATGATGAT+GGG | - | chr8_2:19876064-19876083 | Msa1238920:intron | 35.0% | |
| CCATACCTACTCCTAAATAT+GGG | + | chr8_2:19876598-19876617 | None:intergenic | 35.0% | |
| TCCATACCTACTCCTAAATA+TGG | + | chr8_2:19876599-19876618 | None:intergenic | 35.0% | |
| ! | CATTAAATTGGAGTGGGTTT+GGG | + | chr8_2:19876648-19876667 | None:intergenic | 35.0% |
| ! | TCATTAAATTGGAGTGGGTT+TGG | + | chr8_2:19876649-19876668 | None:intergenic | 35.0% |
| ! | TTTAAAATACGAGTACGGGA+TGG | - | chr8_2:19876681-19876700 | Msa1238920:intron | 35.0% |
| TTAAAATACGAGTACGGGAT+GGG | - | chr8_2:19876682-19876701 | Msa1238920:intron | 35.0% | |
| ATTCAAAACGTGTTCAGTGT+AGG | + | chr8_2:19876728-19876747 | None:intergenic | 35.0% | |
| GCAACATGATAGCCTTTAAA+TGG | - | chr8_2:19876765-19876784 | Msa1238920:intron | 35.0% | |
| GTATGGGTGACATTAAATCT+GGG | + | chr8_2:19876861-19876880 | None:intergenic | 35.0% | |
| TGTATGGGTGACATTAAATC+TGG | + | chr8_2:19876862-19876881 | None:intergenic | 35.0% | |
| ! | TGAATTTGGGTTTGTGTTTG+GGG | - | chr8_2:19877140-19877159 | Msa1238920:CDS | 35.0% |
| TTTCTCACCCCATCAAAAAT+CGG | - | chr8_2:19877262-19877281 | Msa1238920:intron | 35.0% | |
| ! | TACCTTACCCGATTTTTGAT+GGG | + | chr8_2:19877273-19877292 | None:intergenic | 35.0% |
| TGTAAAGCACGTGTCAATAA+TGG | + | chr8_2:19877360-19877379 | None:intergenic | 35.0% | |
| ATATATGCAGGAACTACTAC+AGG | - | chr8_2:19877463-19877482 | Msa1238920:intron | 35.0% | |
| TTGAATTCTATGCACATGCT+TGG | + | chr8_2:19877523-19877542 | None:intergenic | 35.0% | |
| TAGGATCAAGTATGATGTCA+GGG | + | chr8_2:19877608-19877627 | None:intergenic | 35.0% | |
| TTAGGATCAAGTATGATGTC+AGG | + | chr8_2:19877609-19877628 | None:intergenic | 35.0% | |
| !!! | CATTCTTGTTTTGTTGGAGT+TGG | + | chr8_2:19877672-19877691 | None:intergenic | 35.0% |
| !!! | AAGGGACATTCTTGTTTTGT+TGG | + | chr8_2:19877678-19877697 | None:intergenic | 35.0% |
| TCTTTCTTCATCACATTCAG+AGG | - | chr8_2:19877716-19877735 | Msa1238920:CDS | 35.0% | |
| TCACATAAAGGCAATGGAAG+AGG | - | chr8_2:19875458-19875477 | Msa1238920:CDS | 40.0% | |
| CAATGGAAGAGGTTATGAGA+GGG | - | chr8_2:19875469-19875488 | Msa1238920:CDS | 40.0% | |
| CCCTACTGACCAAATTCAAA+AGG | - | chr8_2:19875638-19875657 | Msa1238920:CDS | 40.0% | |
| !! | AAGAGTACTTCTGCAACTAG+AGG | - | chr8_2:19875714-19875733 | Msa1238920:CDS | 40.0% |
| ! | GTTTGTGCAATGTTTCTGCA+TGG | + | chr8_2:19876027-19876046 | None:intergenic | 40.0% |
| GCAGAAACATTGCACAAACA+TGG | - | chr8_2:19876028-19876047 | Msa1238920:intron | 40.0% | |
| GAAACTCCAACAGATGATGA+TGG | - | chr8_2:19876063-19876082 | Msa1238920:intron | 40.0% | |
| GGGCATCAATGGAGAAAATA+TGG | - | chr8_2:19876084-19876103 | Msa1238920:intron | 40.0% | |
| GAGATCCCATATTTAGGAGT+AGG | - | chr8_2:19876590-19876609 | Msa1238920:intron | 40.0% | |
| CCCATATTTAGGAGTAGGTA+TGG | - | chr8_2:19876595-19876614 | Msa1238920:intron | 40.0% | |
| ATGATAGCCTTTAAATGGGG+TGG | - | chr8_2:19876770-19876789 | Msa1238920:intron | 40.0% | |
| TGTCACCGTGACATTAAATC+TGG | - | chr8_2:19876809-19876828 | Msa1238920:intron | 40.0% | |
| GTCACCGTGACATTAAATCT+GGG | - | chr8_2:19876810-19876829 | Msa1238920:intron | 40.0% | |
| ! | ACACAAAGGTGTATGTTGTG+TGG | + | chr8_2:19876836-19876855 | None:intergenic | 40.0% |
| ACACAACATACACCTTTGTG+TGG | - | chr8_2:19876835-19876854 | Msa1238920:intron | 40.0% | |
| ATTAAATCTGGGCCACACAA+AGG | + | chr8_2:19876821-19876840 | None:intergenic | 40.0% | |
| ACACAAAGGGTTGTGTTATG+TGG | + | chr8_2:19876896-19876915 | None:intergenic | 40.0% | |
| ACATAACACAACCCTTTGTG+TGG | - | chr8_2:19876895-19876914 | Msa1238920:intron | 40.0% | |
| TTAAATCTGGGCCACACAAA+GGG | + | chr8_2:19876849-19876868 | None:intergenic | 40.0% | |
| ATTAAATCTGGGCCACACAA+AGG | + | chr8_2:19876821-19876840 | None:intergenic | 40.0% | |
| GTCACCGTGACATTAAATCT+GGG | + | chr8_2:19876810-19876829 | None:intergenic | 40.0% | |
| TGTCACCGTGACATTAAATC+TGG | + | chr8_2:19876809-19876828 | None:intergenic | 40.0% | |
| ATACCTAAATCCGTCGAAGA+CGG | - | chr8_2:19877232-19877251 | Msa1238920:intron | 40.0% | |
| TTCTCACCCCATCAAAAATC+GGG | - | chr8_2:19877263-19877282 | Msa1238920:intron | 40.0% | |
| ! | ACCTTACCCGATTTTTGATG+GGG | + | chr8_2:19877272-19877291 | None:intergenic | 40.0% |
| ! | CTACCTTACCCGATTTTTGA+TGG | + | chr8_2:19877274-19877293 | None:intergenic | 40.0% |
| TTTAAAGACGAGGATGGGAA+AGG | - | chr8_2:19877306-19877325 | Msa1238920:intron | 40.0% | |
| TGTCAATAATGGCAATGGAG+CGG | + | chr8_2:19877349-19877368 | None:intergenic | 40.0% | |
| TATGCACATGCTTGGTTGTT+AGG | + | chr8_2:19877515-19877534 | None:intergenic | 40.0% | |
| TAGGTTGTCTTATACAAGGG+AGG | + | chr8_2:19877552-19877571 | None:intergenic | 40.0% | |
| ACAAGTGTGGTGACCATAAT+AGG | + | chr8_2:19877571-19877590 | None:intergenic | 40.0% | |
| TATTATGGTCACCACACTTG+TGG | - | chr8_2:19877570-19877589 | Msa1238920:CDS | 40.0% | |
| TCAAGTATGATGTCAGGGTT+GGG | + | chr8_2:19877603-19877622 | None:intergenic | 40.0% | |
| ATCAAGTATGATGTCAGGGT+TGG | + | chr8_2:19877604-19877623 | None:intergenic | 40.0% | |
| TCACATAAAGGCAATGGAAG+AGG | - | chr8_2:19875458-19875477 | Msa1238920:CDS | 40.0% | |
| CAATGGAAGAGGTTATGAGA+GGG | - | chr8_2:19875469-19875488 | Msa1238920:CDS | 40.0% | |
| CCCTACTGACCAAATTCAAA+AGG | - | chr8_2:19875638-19875657 | Msa1238920:CDS | 40.0% | |
| !! | AAGAGTACTTCTGCAACTAG+AGG | - | chr8_2:19875714-19875733 | Msa1238920:CDS | 40.0% |
| ! | GTTTGTGCAATGTTTCTGCA+TGG | + | chr8_2:19876027-19876046 | None:intergenic | 40.0% |
| GCAGAAACATTGCACAAACA+TGG | - | chr8_2:19876028-19876047 | Msa1238920:intron | 40.0% | |
| GAAACTCCAACAGATGATGA+TGG | - | chr8_2:19876063-19876082 | Msa1238920:intron | 40.0% | |
| GGGCATCAATGGAGAAAATA+TGG | - | chr8_2:19876084-19876103 | Msa1238920:intron | 40.0% | |
| GAGATCCCATATTTAGGAGT+AGG | - | chr8_2:19876590-19876609 | Msa1238920:intron | 40.0% | |
| CCCATATTTAGGAGTAGGTA+TGG | - | chr8_2:19876595-19876614 | Msa1238920:intron | 40.0% | |
| ATGATAGCCTTTAAATGGGG+TGG | - | chr8_2:19876770-19876789 | Msa1238920:intron | 40.0% | |
| TGTCACCGTGACATTAAATC+TGG | - | chr8_2:19876809-19876828 | Msa1238920:intron | 40.0% | |
| GTCACCGTGACATTAAATCT+GGG | - | chr8_2:19876810-19876829 | Msa1238920:intron | 40.0% | |
| ! | ACACAAAGGTGTATGTTGTG+TGG | + | chr8_2:19876836-19876855 | None:intergenic | 40.0% |
| ACACAACATACACCTTTGTG+TGG | - | chr8_2:19876835-19876854 | Msa1238920:intron | 40.0% | |
| ATTAAATCTGGGCCACACAA+AGG | + | chr8_2:19876821-19876840 | None:intergenic | 40.0% | |
| ACACAAAGGGTTGTGTTATG+TGG | + | chr8_2:19876896-19876915 | None:intergenic | 40.0% | |
| ACATAACACAACCCTTTGTG+TGG | - | chr8_2:19876895-19876914 | Msa1238920:intron | 40.0% | |
| TTAAATCTGGGCCACACAAA+GGG | + | chr8_2:19876849-19876868 | None:intergenic | 40.0% | |
| ATTAAATCTGGGCCACACAA+AGG | + | chr8_2:19876821-19876840 | None:intergenic | 40.0% | |
| GTCACCGTGACATTAAATCT+GGG | + | chr8_2:19876810-19876829 | None:intergenic | 40.0% | |
| TGTCACCGTGACATTAAATC+TGG | + | chr8_2:19876809-19876828 | None:intergenic | 40.0% | |
| ATACCTAAATCCGTCGAAGA+CGG | - | chr8_2:19877232-19877251 | Msa1238920:intron | 40.0% | |
| TTCTCACCCCATCAAAAATC+GGG | - | chr8_2:19877263-19877282 | Msa1238920:intron | 40.0% | |
| ! | ACCTTACCCGATTTTTGATG+GGG | + | chr8_2:19877272-19877291 | None:intergenic | 40.0% |
| ! | CTACCTTACCCGATTTTTGA+TGG | + | chr8_2:19877274-19877293 | None:intergenic | 40.0% |
| TTTAAAGACGAGGATGGGAA+AGG | - | chr8_2:19877306-19877325 | Msa1238920:intron | 40.0% | |
| TGTCAATAATGGCAATGGAG+CGG | + | chr8_2:19877349-19877368 | None:intergenic | 40.0% | |
| TATGCACATGCTTGGTTGTT+AGG | + | chr8_2:19877515-19877534 | None:intergenic | 40.0% | |
| TAGGTTGTCTTATACAAGGG+AGG | + | chr8_2:19877552-19877571 | None:intergenic | 40.0% | |
| ACAAGTGTGGTGACCATAAT+AGG | + | chr8_2:19877571-19877590 | None:intergenic | 40.0% | |
| TATTATGGTCACCACACTTG+TGG | - | chr8_2:19877570-19877589 | Msa1238920:CDS | 40.0% | |
| TCAAGTATGATGTCAGGGTT+GGG | + | chr8_2:19877603-19877622 | None:intergenic | 40.0% | |
| ATCAAGTATGATGTCAGGGT+TGG | + | chr8_2:19877604-19877623 | None:intergenic | 40.0% | |
| GCAATGGAAGAGGTTATGAG+AGG | - | chr8_2:19875468-19875487 | Msa1238920:CDS | 45.0% | |
| CATTGCACAAACATGGGAGA+AGG | - | chr8_2:19876035-19876054 | Msa1238920:intron | 45.0% | |
| TGATGCCCATCATCATCTGT+TGG | + | chr8_2:19876072-19876091 | None:intergenic | 45.0% | |
| !! | CAGATGATGATGGGCATCAA+TGG | - | chr8_2:19876073-19876092 | Msa1238920:intron | 45.0% |
| ! | TAAATTGGAGTGGGTTTGGG+CGG | + | chr8_2:19876645-19876664 | None:intergenic | 45.0% |
| ! | CAAAGTGCCACCCCATTTAA+AGG | + | chr8_2:19876780-19876799 | None:intergenic | 45.0% |
| CTTTAAATGGGGTGGCACTT+TGG | - | chr8_2:19876778-19876797 | Msa1238920:intron | 45.0% | |
| GTGGCCCAGATTTAATGTCA+CGG | + | chr8_2:19876854-19876873 | None:intergenic | 45.0% | |
| TGTCACCCATACAACACATC+TGG | - | chr8_2:19876869-19876888 | Msa1238920:intron | 45.0% | |
| GTCACCCATACAACACATCT+GGG | - | chr8_2:19876870-19876889 | Msa1238920:intron | 45.0% | |
| GTGGCCCAGATTTAATGTCA+CGG | - | chr8_2:19876854-19876873 | Msa1238920:intron | 45.0% | |
| ! | ATTTGGGTTTGTGTTTGGGG+TGG | - | chr8_2:19877143-19877162 | Msa1238920:CDS | 45.0% |
| ! | TTTGGGTTTGTGTTTGGGGT+GGG | - | chr8_2:19877144-19877163 | Msa1238920:CDS | 45.0% |
| CTAAGGAGGTAGAGACTATG+AGG | - | chr8_2:19877207-19877226 | Msa1238920:intron | 45.0% | |
| TACCTAAATCCGTCGAAGAC+GGG | - | chr8_2:19877233-19877252 | Msa1238920:intron | 45.0% | |
| AAATTGAACCCCGTCTTCGA+CGG | + | chr8_2:19877245-19877264 | None:intergenic | 45.0% | |
| ACCCCATCAAAAATCGGGTA+AGG | - | chr8_2:19877268-19877287 | Msa1238920:intron | 45.0% | |
| TCAATAATGGCAATGGAGCG+GGG | + | chr8_2:19877347-19877366 | None:intergenic | 45.0% | |
| GTCAATAATGGCAATGGAGC+GGG | + | chr8_2:19877348-19877367 | None:intergenic | 45.0% | |
| GCACGTGTCAATAATGGCAA+TGG | + | chr8_2:19877354-19877373 | None:intergenic | 45.0% | |
| GCAATGGAAGAGGTTATGAG+AGG | - | chr8_2:19875468-19875487 | Msa1238920:CDS | 45.0% | |
| CATTGCACAAACATGGGAGA+AGG | - | chr8_2:19876035-19876054 | Msa1238920:intron | 45.0% | |
| TGATGCCCATCATCATCTGT+TGG | + | chr8_2:19876072-19876091 | None:intergenic | 45.0% | |
| !! | CAGATGATGATGGGCATCAA+TGG | - | chr8_2:19876073-19876092 | Msa1238920:intron | 45.0% |
| ! | TAAATTGGAGTGGGTTTGGG+CGG | + | chr8_2:19876645-19876664 | None:intergenic | 45.0% |
| ! | CAAAGTGCCACCCCATTTAA+AGG | + | chr8_2:19876780-19876799 | None:intergenic | 45.0% |
| CTTTAAATGGGGTGGCACTT+TGG | - | chr8_2:19876778-19876797 | Msa1238920:intron | 45.0% | |
| GTGGCCCAGATTTAATGTCA+CGG | + | chr8_2:19876854-19876873 | None:intergenic | 45.0% | |
| TGTCACCCATACAACACATC+TGG | - | chr8_2:19876869-19876888 | Msa1238920:intron | 45.0% | |
| GTCACCCATACAACACATCT+GGG | - | chr8_2:19876870-19876889 | Msa1238920:intron | 45.0% | |
| GTGGCCCAGATTTAATGTCA+CGG | - | chr8_2:19876854-19876873 | Msa1238920:intron | 45.0% | |
| ! | ATTTGGGTTTGTGTTTGGGG+TGG | - | chr8_2:19877143-19877162 | Msa1238920:CDS | 45.0% |
| ! | TTTGGGTTTGTGTTTGGGGT+GGG | - | chr8_2:19877144-19877163 | Msa1238920:CDS | 45.0% |
| CTAAGGAGGTAGAGACTATG+AGG | - | chr8_2:19877207-19877226 | Msa1238920:intron | 45.0% | |
| TACCTAAATCCGTCGAAGAC+GGG | - | chr8_2:19877233-19877252 | Msa1238920:intron | 45.0% | |
| AAATTGAACCCCGTCTTCGA+CGG | + | chr8_2:19877245-19877264 | None:intergenic | 45.0% | |
| ACCCCATCAAAAATCGGGTA+AGG | - | chr8_2:19877268-19877287 | Msa1238920:intron | 45.0% | |
| TCAATAATGGCAATGGAGCG+GGG | + | chr8_2:19877347-19877366 | None:intergenic | 45.0% | |
| GTCAATAATGGCAATGGAGC+GGG | + | chr8_2:19877348-19877367 | None:intergenic | 45.0% | |
| GCACGTGTCAATAATGGCAA+TGG | + | chr8_2:19877354-19877373 | None:intergenic | 45.0% | |
| GTGGCCCAGATGTGTTGTAT+GGG | + | chr8_2:19876877-19876896 | None:intergenic | 50.0% | |
| TGTGGCCCAGATGTGTTGTA+TGG | + | chr8_2:19876878-19876897 | None:intergenic | 50.0% | |
| ! | TTTGTGTTTGGGGTGGGAAC+CGG | - | chr8_2:19877150-19877169 | Msa1238920:CDS | 50.0% |
| ACCTAAATCCGTCGAAGACG+GGG | - | chr8_2:19877234-19877253 | Msa1238920:intron | 50.0% | |
| TGGGCAAGTTTCCACAAGTG+TGG | + | chr8_2:19877584-19877603 | None:intergenic | 50.0% | |
| GTGGCCCAGATGTGTTGTAT+GGG | + | chr8_2:19876877-19876896 | None:intergenic | 50.0% | |
| TGTGGCCCAGATGTGTTGTA+TGG | + | chr8_2:19876878-19876897 | None:intergenic | 50.0% | |
| ! | TTTGTGTTTGGGGTGGGAAC+CGG | - | chr8_2:19877150-19877169 | Msa1238920:CDS | 50.0% |
| ACCTAAATCCGTCGAAGACG+GGG | - | chr8_2:19877234-19877253 | Msa1238920:intron | 50.0% | |
| TGGGCAAGTTTCCACAAGTG+TGG | + | chr8_2:19877584-19877603 | None:intergenic | 50.0% | |
| CGAGTACGGGATGGGTAACA+TGG | - | chr8_2:19876690-19876709 | Msa1238920:intron | 55.0% | |
| ! | ACCCCGTCTTCGACGGATTT+AGG | + | chr8_2:19877238-19877257 | None:intergenic | 55.0% |
| ATAATGGCAATGGAGCGGGG+CGG | + | chr8_2:19877344-19877363 | None:intergenic | 55.0% | |
| CGAGTACGGGATGGGTAACA+TGG | - | chr8_2:19876690-19876709 | Msa1238920:intron | 55.0% | |
| ! | ACCCCGTCTTCGACGGATTT+AGG | + | chr8_2:19877238-19877257 | None:intergenic | 55.0% |
| ATAATGGCAATGGAGCGGGG+CGG | + | chr8_2:19877344-19877363 | None:intergenic | 55.0% | |
| TAATGGCAATGGAGCGGGGC+GGG | + | chr8_2:19877343-19877362 | None:intergenic | 60.0% | |
| TAATGGCAATGGAGCGGGGC+GGG | + | chr8_2:19877343-19877362 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 19875447 | 19877779 | 19875447 | ID=Msa1238920;Name=Msa1238920 |
| chr8_2 | mRNA | 19875447 | 19877779 | 19875447 | ID=Msa1238920-mRNA-1;Parent=Msa1238920;Name=Msa1238920-mRNA-1;_AED=0.08;_eAED=0.11;_QI=0|0|0|1|1|1|3|0|239 |
| chr8_2 | exon | 19877475 | 19877779 | 19877475 | ID=Msa1238920-mRNA-1:exon:7303;Parent=Msa1238920-mRNA-1 |
| chr8_2 | exon | 19877087 | 19877194 | 19877087 | ID=Msa1238920-mRNA-1:exon:7302;Parent=Msa1238920-mRNA-1 |
| chr8_2 | exon | 19875447 | 19875753 | 19875447 | ID=Msa1238920-mRNA-1:exon:7301;Parent=Msa1238920-mRNA-1 |
| chr8_2 | CDS | 19877475 | 19877779 | 19877475 | ID=Msa1238920-mRNA-1:cds;Parent=Msa1238920-mRNA-1 |
| chr8_2 | CDS | 19877087 | 19877194 | 19877087 | ID=Msa1238920-mRNA-1:cds;Parent=Msa1238920-mRNA-1 |
| chr8_2 | CDS | 19875447 | 19875753 | 19875447 | ID=Msa1238920-mRNA-1:cds;Parent=Msa1238920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
