AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1239370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1239370 MtrunA17_Chr8g0351051 98.333 240 4 0 1 240 12 251 9.28e-179 490
Msa1239370 MtrunA17_Chr3g0122251 48.374 246 108 7 1 239 12 245 8.94e-66 204
Msa1239370 MtrunA17_Chr6g0455511 47.755 245 117 7 1 240 12 250 2.78e-64 200
Msa1239370 MtrunA17_Chr7g0220111 45.714 245 121 7 1 240 12 249 2.17e-60 190
Msa1239370 MtrunA17_Chr5g0420091 61.350 163 60 2 1 161 12 173 2.06e-59 186
Msa1239370 MtrunA17_Chr7g0246401 68.889 135 32 3 110 240 1 129 5.39e-59 182
Msa1239370 MtrunA17_Chr1g0204111 44.495 218 101 2 2 218 29 227 2.22e-55 177
Msa1239370 MtrunA17_Chr6g0474371 56.790 162 68 2 1 160 12 173 2.75e-52 167
Msa1239370 MtrunA17_Chr4g0061671 56.173 162 68 3 1 161 12 171 4.08e-52 167
Msa1239370 MtrunA17_Chr4g0061691 56.051 157 68 1 1 156 12 168 8.88e-51 165
Msa1239370 MtrunA17_Chr2g0284911 48.750 160 82 0 1 160 27 186 1.69e-47 157
Msa1239370 MtrunA17_Chr3g0097101 50.000 160 80 0 1 160 27 186 5.20e-46 153
Msa1239370 MtrunA17_Chr8g0366231 44.498 209 107 5 1 204 12 216 7.48e-46 152
Msa1239370 MtrunA17_Chr8g0380021 43.229 192 102 2 1 191 28 213 1.88e-45 152
Msa1239370 MtrunA17_Chr5g0420081 44.279 201 108 4 1 198 12 211 1.84e-43 146
Msa1239370 MtrunA17_Chr4g0057151 51.220 164 64 3 1 156 12 167 4.70e-43 144
Msa1239370 MtrunA17_Chr3g0077501 43.316 187 96 1 1 177 12 198 5.48e-43 145
Msa1239370 MtrunA17_Chr7g0246431 49.359 156 79 0 1 156 12 167 2.38e-42 143
Msa1239370 MtrunA17_Chr8g0351031 49.045 157 79 1 1 156 12 168 3.75e-42 142
Msa1239370 MtrunA17_Chr2g0279821 38.865 229 121 5 1 222 12 228 9.75e-41 139
Msa1239370 MtrunA17_Chr8g0351041 48.667 150 76 1 1 149 12 161 1.19e-40 137
Msa1239370 MtrunA17_Chr7g0220121 47.826 161 73 3 1 156 12 166 1.12e-38 135
Msa1239370 MtrunA17_Chr5g0411691 42.331 163 86 2 1 160 12 169 1.98e-35 126
Msa1239370 MtrunA17_Chr1g0164791 36.607 224 118 5 1 215 12 220 2.38e-35 125
Msa1239370 MtrunA17_Chr8g0377551 37.234 188 106 4 53 239 3 179 5.86e-34 120
Msa1239370 MtrunA17_Chr4g0049541 45.270 148 74 2 1 145 12 155 9.25e-34 121
Msa1239370 MtrunA17_Chr4g0020221 44.848 165 85 2 1 161 12 174 2.38e-31 115
Msa1239370 MtrunA17_Chr3g0125241 44.853 136 68 2 1 134 37 167 2.86e-30 111
Msa1239370 MtrunA17_Chr4g0018421 42.593 162 85 3 1 157 12 170 2.94e-30 111
Msa1239370 MtrunA17_Chr5g0412461 41.622 185 97 4 1 180 12 190 1.90e-29 110
Msa1239370 MtrunA17_Chr5g0427401 40.104 192 96 5 1 188 12 188 3.58e-29 109
Msa1239370 MtrunA17_Chr4g0049901 37.436 195 106 5 1 188 38 223 3.61e-29 109
Msa1239370 MtrunA17_Chr5g0412271 41.420 169 85 3 1 162 12 173 3.76e-29 109
Msa1239370 MtrunA17_Chr3g0142191 34.234 222 126 5 1 207 12 228 4.83e-27 103
Msa1239370 MtrunA17_Chr5g0404951 38.596 171 86 5 1 161 12 173 1.39e-26 102
Msa1239370 MtrunA17_Chr1g0159661 39.333 150 82 3 1 146 12 156 2.11e-25 98.2
Msa1239370 MtrunA17_Chr7g0246381 93.750 48 3 0 1 48 12 59 6.98e-25 93.6
Msa1239370 MtrunA17_Chr8g0377561 95.652 46 2 0 1 46 12 57 3.46e-24 92.8
Msa1239370 MtrunA17_Chr2g0308251 83.333 48 8 0 1 48 12 59 3.84e-22 87.0
Msa1239370 MtrunA17_Chr1g0173161 83.333 48 8 0 1 48 12 59 1.61e-19 80.1
Msa1239370 MtrunA17_Chr2g0308271 40.741 108 64 0 53 160 36 143 1.69e-18 80.9
Msa1239370 MtrunA17_Chr1g0166611 44.762 105 48 3 5 109 20 114 1.73e-18 79.0
Msa1239370 MtrunA17_Chr5g0427921 70.833 48 14 0 1 48 12 59 1.56e-16 71.6
Msa1239370 MtrunA17_Chr4g0044071 65.957 47 16 0 1 47 12 58 5.55e-16 71.6
Msa1239370 MtrunA17_Chr1g0208581 34.437 151 81 4 2 144 20 160 5.88e-16 74.3
Msa1239370 MtrunA17_Chr2g0292791 36.364 154 82 5 2 148 20 164 7.18e-16 74.3
Msa1239370 MtrunA17_Chr3g0134451 62.712 59 21 1 1 58 12 70 7.18e-16 75.5
Msa1239370 MtrunA17_Chr5g0425191 68.085 47 15 0 1 47 12 58 1.67e-15 70.1
Msa1239370 MtrunA17_Chr7g0246391 53.521 71 30 3 32 101 26 94 3.02e-15 69.3
Msa1239370 MtrunA17_Chr2g0325971 33.113 151 83 5 2 144 20 160 7.23e-15 71.2
Msa1239370 MtrunA17_Chr1g0208561 50.000 68 32 1 2 69 20 85 9.12e-15 71.2
Msa1239370 MtrunA17_Chr3g0089141 40.000 95 55 1 2 96 20 112 9.59e-15 70.9
Msa1239370 MtrunA17_Chr5g0419601 54.412 68 29 1 2 69 20 85 3.04e-14 69.7
Msa1239370 MtrunA17_Chr4g0018951 57.407 54 23 0 5 58 26 79 3.46e-14 68.2
Msa1239370 MtrunA17_Chr2g0317481 52.941 68 30 1 2 69 20 85 6.18e-14 68.9
Msa1239370 MtrunA17_Chr3g0099411 54.386 57 26 0 2 58 20 76 6.19e-14 68.6
Msa1239370 MtrunA17_Chr2g0317451 52.941 68 30 1 2 69 20 85 6.30e-14 68.9
Msa1239370 MtrunA17_Chr8g0376821 56.604 53 23 0 6 58 17 69 7.11e-14 67.8
Msa1239370 MtrunA17_Chr1g0206721 54.386 57 26 0 2 58 20 76 1.06e-13 68.2
Msa1239370 MtrunA17_Chr3g0099421 35.714 154 83 5 2 148 45 189 1.10e-13 68.6
Msa1239370 MtrunA17_Chr1g0169761 56.604 53 23 0 6 58 17 69 1.16e-13 67.0
Msa1239370 MtrunA17_Chr1g0206701 54.386 57 26 0 2 58 20 76 1.26e-13 68.2
Msa1239370 MtrunA17_Chr8g0355091 54.386 57 26 0 2 58 20 76 1.71e-13 67.8
Msa1239370 MtrunA17_Chr8g0379021 51.724 58 28 0 1 58 22 79 2.21e-13 66.2
Msa1239370 MtrunA17_Chr1g0187361 54.386 57 26 0 2 58 20 76 2.55e-13 67.4
Msa1239370 MtrunA17_Chr1g0149391 56.140 57 25 0 2 58 20 76 2.93e-13 67.0
Msa1239370 MtrunA17_Chr5g0422941 35.075 134 58 3 2 135 20 124 2.96e-13 67.0
Msa1239370 MtrunA17_Chr1g0188671 54.386 57 26 0 2 58 58 114 6.01e-13 66.6
Msa1239370 MtrunA17_Chr1g0206691 52.632 57 27 0 2 58 3 59 6.39e-13 65.9
Msa1239370 MtrunA17_Chr4g0074101 52.830 53 25 0 6 58 17 69 7.88e-13 65.1
Msa1239370 MtrunA17_Chr1g0187351 50.000 66 32 1 2 67 3 67 9.68e-13 61.6
Msa1239370 MtrunA17_Chr3g0119901 47.222 72 34 2 3 72 21 90 1.21e-12 64.7
Msa1239370 MtrunA17_Chr1g0175611 54.717 53 24 0 6 58 17 69 1.22e-12 63.9
Msa1239370 MtrunA17_Chr5g0422421 51.471 68 32 1 2 69 20 86 1.42e-12 65.1
Msa1239370 MtrunA17_Chr1g0206991 50.877 57 28 0 2 58 20 76 1.86e-12 63.9
Msa1239370 MtrunA17_Chr8g0357771 58.696 46 19 0 2 47 13 58 2.29e-12 63.5
Msa1239370 MtrunA17_Chr1g0180591 52.830 53 25 0 6 58 17 69 3.19e-12 63.2
Msa1239370 MtrunA17_Chr2g0333981 51.724 58 28 0 1 58 22 79 4.86e-12 62.8
Msa1239370 MtrunA17_Chr1g0175601 34.351 131 70 5 6 124 17 143 5.10e-12 62.8
Msa1239370 MtrunA17_Chr2g0300441 50.877 57 28 0 2 58 20 76 7.74e-12 63.2
Msa1239370 MtrunA17_Chr3g0085241 44.444 72 36 2 3 72 53 122 1.08e-11 62.8
Msa1239370 MtrunA17_Chr3g0089151 35.455 110 65 3 2 108 20 126 1.33e-11 60.5
Msa1239370 MtrunA17_Chr4g0071601 52.830 53 25 0 6 58 27 79 1.35e-11 61.6
Msa1239370 MtrunA17_Chr4g0052061 56.250 48 21 0 1 48 12 59 1.37e-11 60.8
Msa1239370 MtrunA17_Chr2g0300421 32.593 135 71 5 5 130 23 146 3.00e-11 60.5
Msa1239370 MtrunA17_Chr3g0111841 49.231 65 32 1 2 66 7 70 6.83e-11 57.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1239370 AT2G45650.1 64.754 244 79 5 1 240 12 252 7.29e-104 301
Msa1239370 AT3G61120.1 55.187 241 95 6 1 236 12 244 5.81e-78 235
Msa1239370 AT3G02310.1 46.281 242 125 3 1 240 12 250 3.40e-65 203
Msa1239370 AT5G15800.1 45.643 241 129 2 1 240 12 251 3.02e-63 198
Msa1239370 AT1G24260.2 46.964 247 109 7 1 239 12 244 1.89e-61 193
Msa1239370 AT5G15800.2 49.763 211 104 2 1 210 12 221 4.29e-61 193
Msa1239370 AT1G24260.1 47.541 244 111 7 1 239 12 243 1.43e-60 191
Msa1239370 AT3G02310.2 58.750 160 65 1 1 159 12 171 2.54e-57 181
Msa1239370 AT2G03710.1 41.538 260 119 8 1 240 12 258 2.01e-55 178
Msa1239370 AT2G03710.2 41.923 260 117 9 1 240 12 257 1.07e-54 176
Msa1239370 AT1G24260.3 44.130 247 102 7 1 239 12 230 3.51e-54 174
Msa1239370 AT2G03710.3 52.469 162 74 2 1 160 12 172 1.44e-50 163
Msa1239370 AT3G58780.5 48.555 173 88 1 1 172 33 205 1.20e-48 160
Msa1239370 AT3G58780.1 48.555 173 88 1 1 172 27 199 1.51e-48 160
Msa1239370 AT1G26310.1 44.907 216 109 5 1 210 12 223 1.35e-47 158
Msa1239370 AT2G42830.1 50.000 160 80 0 1 160 27 186 2.93e-47 157
Msa1239370 AT1G69120.2 44.749 219 113 5 1 214 12 227 6.41e-47 155
Msa1239370 AT1G69120.1 53.797 158 70 3 1 156 12 168 6.08e-46 154
Msa1239370 AT4G18960.1 41.379 232 115 5 1 229 28 241 9.35e-46 153
Msa1239370 AT2G42830.2 49.664 149 75 0 1 149 27 175 2.21e-45 152
Msa1239370 AT5G60910.1 48.765 162 82 1 1 161 12 173 1.67e-44 150
Msa1239370 AT3G58780.2 46.821 173 84 2 1 172 27 192 1.81e-44 149
Msa1239370 AT4G22950.2 50.311 161 79 1 1 161 12 171 2.49e-44 147
Msa1239370 AT4G22950.3 50.610 164 80 1 1 164 12 174 4.82e-44 148
Msa1239370 AT4G22950.1 50.610 164 80 1 1 164 12 174 4.82e-44 148
Msa1239370 AT4G09960.6 42.708 192 98 2 1 180 13 204 1.65e-43 147
Msa1239370 AT4G09960.1 42.708 192 98 2 1 180 12 203 2.26e-43 146
Msa1239370 AT4G09960.5 41.667 192 100 1 1 180 22 213 2.33e-43 147
Msa1239370 AT3G58780.3 42.929 198 87 2 1 172 27 224 4.01e-43 147
Msa1239370 AT4G09960.3 42.708 192 98 2 1 180 38 229 9.22e-43 145
Msa1239370 AT5G62165.3 47.799 159 83 0 1 159 12 170 9.90e-43 144
Msa1239370 AT5G62165.1 47.799 159 83 0 1 159 12 170 9.90e-43 144
Msa1239370 AT5G62165.2 47.799 159 83 0 1 159 12 170 9.90e-43 144
Msa1239370 AT3G58780.4 40.777 206 88 2 1 172 27 232 6.09e-42 144
Msa1239370 AT2G45660.1 48.447 161 73 2 1 156 12 167 1.47e-41 141
Msa1239370 AT5G62165.17 48.951 143 73 0 1 143 12 154 1.55e-41 139
Msa1239370 AT5G62165.12 48.951 143 73 0 1 143 12 154 1.55e-41 139
Msa1239370 AT5G62165.11 48.951 143 73 0 1 143 12 154 1.55e-41 139
Msa1239370 AT2G45660.2 49.333 150 66 2 1 145 12 156 3.40e-40 136
Msa1239370 AT5G62165.6 49.630 135 68 0 1 135 12 146 1.05e-39 134
Msa1239370 AT5G62165.9 49.630 135 68 0 1 135 12 146 1.05e-39 134
Msa1239370 AT5G62165.7 49.630 135 68 0 1 135 12 146 1.05e-39 134
Msa1239370 AT5G62165.8 49.630 135 68 0 1 135 12 146 1.05e-39 134
Msa1239370 AT5G62165.13 49.630 135 68 0 1 135 12 146 1.05e-39 134
Msa1239370 AT4G09960.4 40.816 196 100 2 1 180 107 302 5.66e-39 138
Msa1239370 AT5G62165.10 46.897 145 77 0 1 145 12 156 3.95e-38 132
Msa1239370 AT5G62165.4 46.897 145 77 0 1 145 12 156 3.95e-38 132
Msa1239370 AT4G11880.2 50.000 146 71 2 1 145 12 156 6.23e-38 131
Msa1239370 AT4G11880.3 50.000 146 71 2 1 145 12 156 6.23e-38 131
Msa1239370 AT4G09960.2 48.092 131 68 0 1 131 12 142 8.05e-38 132
Msa1239370 AT3G57230.1 46.154 143 76 1 2 144 13 154 3.03e-36 128
Msa1239370 AT3G57230.4 46.154 143 76 1 2 144 13 154 3.03e-36 128
Msa1239370 AT4G11880.4 50.000 162 79 2 1 161 12 172 7.96e-36 127
Msa1239370 AT4G11880.1 50.000 162 79 2 1 161 12 172 7.96e-36 127
Msa1239370 AT5G13790.2 48.428 159 74 2 1 157 12 164 1.19e-35 127
Msa1239370 AT3G30260.1 48.630 146 62 4 1 139 12 151 1.33e-35 127
Msa1239370 AT2G14210.1 36.207 232 128 5 1 228 12 227 8.49e-35 124
Msa1239370 AT2G14210.2 36.207 232 128 5 1 228 12 227 8.52e-35 124
Msa1239370 AT3G57230.2 48.092 131 67 1 2 132 13 142 1.86e-34 120
Msa1239370 AT5G13790.1 48.125 160 70 3 1 157 12 161 2.45e-34 124
Msa1239370 AT4G24540.1 40.291 206 115 4 1 201 12 214 6.93e-34 122
Msa1239370 AT4G37940.1 42.759 145 82 1 1 145 12 155 2.72e-33 120
Msa1239370 AT2G22630.1 45.205 146 78 2 1 145 12 156 8.48e-33 119
Msa1239370 AT2G22630.2 45.205 146 78 2 1 145 12 156 8.48e-33 119
Msa1239370 AT5G51870.1 35.961 203 114 4 1 201 12 200 1.00e-31 115
Msa1239370 AT4G37940.4 40.385 156 92 1 1 156 12 166 1.04e-31 116
Msa1239370 AT5G51860.2 40.491 163 92 2 1 160 12 172 1.06e-31 115
Msa1239370 AT4G37940.3 45.113 133 72 1 1 133 12 143 1.80e-31 114
Msa1239370 AT5G51860.1 40.741 162 91 2 1 159 12 171 2.13e-31 115
Msa1239370 AT5G51870.4 41.875 160 88 3 1 158 12 168 6.57e-31 114
Msa1239370 AT5G51870.3 41.875 160 88 3 1 158 22 178 6.78e-31 114
Msa1239370 AT3G57390.3 41.341 179 96 4 1 170 12 190 3.25e-30 112
Msa1239370 AT3G57390.1 41.341 179 96 4 1 170 12 190 5.14e-30 112
Msa1239370 AT2G22540.3 44.720 161 81 3 1 157 12 168 1.85e-29 110
Msa1239370 AT2G22540.1 44.720 161 81 3 1 157 12 168 1.85e-29 110
Msa1239370 AT5G10140.4 41.558 154 78 4 1 150 12 157 6.73e-28 105
Msa1239370 AT5G20240.1 39.264 163 88 3 1 161 12 165 7.75e-28 105
Msa1239370 AT5G23260.2 40.506 158 89 2 1 156 12 166 1.98e-27 105
Msa1239370 AT5G51870.2 42.336 137 76 2 1 135 12 147 2.21e-27 103
Msa1239370 AT1G71692.1 37.561 205 106 6 1 194 12 205 3.59e-27 104
Msa1239370 AT5G23260.4 40.506 158 89 2 1 156 28 182 3.99e-27 105
Msa1239370 AT5G51870.5 42.336 137 76 2 1 135 35 170 6.53e-27 103
Msa1239370 AT5G10140.2 43.262 141 71 3 1 140 12 144 1.26e-26 101
Msa1239370 AT5G62165.14 60.241 83 29 1 1 83 12 90 1.44e-26 99.4
Msa1239370 AT5G10140.1 43.262 141 71 3 1 140 12 144 1.47e-26 102
Msa1239370 AT5G10140.3 43.262 141 71 3 1 140 12 144 2.05e-26 101
Msa1239370 AT2G22540.2 43.478 161 78 4 1 157 12 163 2.43e-26 102
Msa1239370 AT3G54340.1 38.235 170 84 3 1 161 12 169 4.56e-26 101
Msa1239370 AT5G20240.2 41.176 136 73 2 1 134 12 142 7.65e-25 96.3
Msa1239370 AT5G23260.1 39.241 158 86 3 1 156 28 177 1.31e-23 95.9
Msa1239370 AT5G23260.3 40.288 139 78 2 1 137 12 147 8.68e-23 93.2
Msa1239370 AT5G65060.3 36.306 157 91 2 1 156 12 160 2.37e-22 90.9
Msa1239370 AT5G65070.1 35.233 193 115 4 1 192 12 195 3.54e-22 90.9
Msa1239370 AT5G65060.1 36.306 157 91 2 1 156 12 160 3.67e-22 90.5
Msa1239370 AT5G65050.2 36.943 157 90 2 1 156 12 160 6.37e-22 89.4
Msa1239370 AT5G65080.3 40.127 157 82 4 1 156 19 164 1.07e-21 89.4
Msa1239370 AT5G65050.3 36.943 157 90 2 1 156 12 160 1.64e-21 89.0
Msa1239370 AT1G31140.1 40.559 143 70 4 1 135 12 147 2.07e-20 86.3
Msa1239370 AT1G31140.2 40.580 138 79 2 1 135 12 149 2.68e-20 86.3
Msa1239370 AT5G65050.1 36.552 145 83 2 1 144 12 148 3.22e-20 85.1
Msa1239370 AT5G65070.2 32.870 216 120 5 1 192 12 226 3.81e-20 86.3
Msa1239370 AT5G65050.5 37.580 157 78 3 1 156 12 149 5.51e-20 84.7
Msa1239370 AT1G77080.11 40.127 157 85 3 1 156 12 160 1.09e-19 83.6
Msa1239370 AT5G65060.2 35.669 157 81 3 1 156 12 149 1.37e-19 83.6
Msa1239370 AT1G77080.4 40.127 157 85 3 1 156 12 160 2.15e-19 83.2
Msa1239370 AT1G77080.5 40.127 157 85 3 1 156 12 160 2.97e-19 82.4
Msa1239370 AT5G65070.5 36.646 161 78 4 1 137 12 172 8.16e-19 82.0
Msa1239370 AT5G65080.2 38.732 142 79 3 1 142 19 152 1.15e-18 81.6
Msa1239370 AT1G77080.2 36.538 156 88 2 1 156 12 156 2.74e-18 80.1
Msa1239370 AT1G69120.3 45.714 105 55 2 53 156 3 106 5.78e-18 79.3
Msa1239370 AT5G65070.4 37.956 137 76 3 1 136 12 140 6.12e-18 78.2
Msa1239370 AT5G65070.3 30.667 225 114 5 1 192 12 227 2.89e-17 78.6
Msa1239370 AT1G77080.12 35.862 145 82 2 1 145 12 145 9.45e-17 75.1
Msa1239370 AT1G77080.8 34.807 181 88 3 1 156 12 187 2.44e-16 75.9
Msa1239370 AT1G22130.1 54.412 68 29 1 1 68 12 77 1.50e-15 75.1
Msa1239370 AT5G60910.2 35.780 109 70 0 53 161 3 111 1.63e-15 72.4
Msa1239370 AT4G18960.3 31.111 180 103 5 53 229 66 227 3.48e-15 72.8
Msa1239370 AT4G18960.2 31.111 180 103 5 53 229 66 227 3.48e-15 72.8
Msa1239370 AT1G77980.1 56.667 60 24 1 1 60 12 69 8.68e-15 72.8
Msa1239370 AT4G18960.4 33.945 109 72 0 53 161 66 174 1.75e-14 69.7
Msa1239370 AT1G01530.1 55.357 56 25 0 2 57 18 73 8.19e-14 69.3
Msa1239370 AT1G65360.1 35.052 97 60 1 5 98 21 117 3.67e-13 67.0
Msa1239370 AT4G36590.1 47.887 71 37 0 1 71 17 87 1.01e-12 66.2
Msa1239370 AT5G60440.1 51.724 58 28 0 1 58 17 74 1.03e-12 66.6
Msa1239370 AT2G34440.1 50.909 55 27 0 6 60 17 71 1.32e-12 64.3
Msa1239370 AT1G72350.1 56.364 55 22 1 6 60 58 110 1.95e-12 65.1
Msa1239370 AT2G24840.1 51.852 54 26 0 5 58 77 130 6.37e-12 63.9
Msa1239370 AT1G77950.3 50.847 59 28 1 1 58 12 70 6.70e-12 63.9
Msa1239370 AT1G77950.2 50.847 59 28 1 1 58 12 70 6.70e-12 63.9
Msa1239370 AT1G77950.1 50.847 59 28 1 1 58 12 70 6.70e-12 63.9
Msa1239370 AT1G77950.4 50.847 59 28 1 1 58 12 70 6.70e-12 63.9
Msa1239370 AT4G37435.1 65.854 41 14 0 6 46 17 57 1.90e-11 61.6
Msa1239370 AT3G66656.1 41.892 74 40 1 6 79 17 87 3.39e-11 60.8

Find 53 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGTACCCTATTTGCAAAA+AGG 0.285817 8_2:+21004133 None:intergenic
AAATGGAAGAGCTTCGTAAA+AGG 0.290591 8_2:-21004646 Msa1239370:CDS
CGTGGCAAACTCTATGAATT+TGG 0.319871 8_2:-21008376 Msa1239370:CDS
CTCTATGAATTTGGAAGTGT+TGG 0.323540 8_2:-21008367 Msa1239370:CDS
GTCATTTCAGGCAGTTGCTT+GGG 0.333279 8_2:-21005034 Msa1239370:intron
ATATCCATACTCATATTCAT+AGG 0.359722 8_2:+21004167 None:intergenic
TGGAGCTCTAATTCAGTTGC+TGG 0.365559 8_2:-21004227 Msa1239370:CDS
CAACCCTATGAATATGAGTA+TGG 0.368330 8_2:-21004171 Msa1239370:CDS
AGAAATTATGATTGAACAAA+TGG 0.370468 8_2:-21004663 Msa1239370:CDS
TTGGTATCGTTCAATGGTTT+TGG 0.371876 8_2:+21006366 None:intergenic
TCTTGGACCTTTGAACATAA+AGG 0.389505 8_2:-21005006 Msa1239370:CDS
CAGTTGCTTGGGGAAGATCT+TGG 0.428496 8_2:-21005023 Msa1239370:CDS
GAGAATTGAACAAGCAACTA+AGG 0.443801 8_2:-21004413 Msa1239370:CDS
TTAAGGCAATGGAAAGTTTG+TGG 0.456921 8_2:-21004247 Msa1239370:CDS
TGCAACTCCTTTATGTTCAA+AGG 0.461252 8_2:+21004999 None:intergenic
ATGCTCTTGGAAACATTAGA+TGG 0.468413 8_2:+21003839 None:intergenic
GCACCGTTGGTATCGTTCAA+TGG 0.471712 8_2:+21006360 None:intergenic
CCTTCAGCTTAGAAACCTCT+TGG 0.471990 8_2:+21005568 None:intergenic
GGGAGAGGGATTTAATCTTA+AGG 0.479351 8_2:-21004264 Msa1239370:CDS
CCTGTGTGTCACAATCAATT+TGG 0.486260 8_2:+21006311 None:intergenic
CATACTCATATTCATAGGGT+TGG 0.487085 8_2:+21004172 None:intergenic
GGGATTTAATCTTAAGGCAA+TGG 0.487191 8_2:-21004258 Msa1239370:CDS
AATGGAAGAGCTTCGTAAAA+GGG 0.488154 8_2:-21004645 Msa1239370:intron
ATGGCTCAGCTTGAACATAC+TGG 0.488446 8_2:+21003858 None:intergenic
GAATAGAGAACAAAATAAAC+CGG 0.490867 8_2:-21008498 None:intergenic
TGTCATTTCAGGCAGTTGCT+TGG 0.500941 8_2:-21005035 Msa1239370:intron
AGTCTCACAAGCCATGCTCT+TGG 0.503465 8_2:+21003826 None:intergenic
CACGGCTAGAGAAAATGATA+AGG 0.506200 8_2:+21008395 None:intergenic
TCTATGAATTTGGAAGTGTT+GGG 0.506329 8_2:-21008366 Msa1239370:intron
ATATTCATAGGGTTGGTTTG+AGG 0.512979 8_2:+21004179 None:intergenic
TTGTGAGACTAACTTCATGC+AGG 0.528929 8_2:-21003813 Msa1239370:CDS
GAACAAGCAACTAAGGATCA+AGG 0.540506 8_2:-21004406 Msa1239370:intron
ATCTAATGTTTCCAAGAGCA+TGG 0.544048 8_2:-21003837 Msa1239370:CDS
ACGGCTAGAGAAAATGATAA+GGG 0.547854 8_2:+21008396 None:intergenic
AGCACAAGCTAGGCAAAGAA+AGG 0.555280 8_2:-21004946 Msa1239370:intron
CAAAGTATGAATCTCTTCAA+AGG 0.555360 8_2:-21005545 Msa1239370:CDS
AGAGAACAAAATAAACCGGC+AGG 0.560471 8_2:-21008494 Msa1239370:CDS
TATCCATACTCATATTCATA+GGG 0.561894 8_2:+21004168 None:intergenic
GAGGATTAAATGAGCACCGT+TGG 0.567469 8_2:+21006347 None:intergenic
CTTGAACATACTGGTACTGT+TGG 0.571481 8_2:+21003867 None:intergenic
CCAAGAGGTTTCTAAGCTGA+AGG 0.572937 8_2:-21005568 Msa1239370:CDS
TCATTTCAGGCAGTTGCTTG+GGG 0.587356 8_2:-21005033 Msa1239370:intron
AAGGTGCATTAGCACAAGCT+AGG 0.590577 8_2:-21004956 Msa1239370:CDS
GTTGGTTTGAGGTGTCTGAA+AGG 0.598161 8_2:+21004190 None:intergenic
ATTTGGTGGTCATCTTGCTG+AGG 0.603360 8_2:+21006328 None:intergenic
AGACTAACTTCATGCAGGGA+TGG 0.615060 8_2:-21003808 Msa1239370:CDS
CAAGCAGAGTTGGTACCAAG+AGG 0.621451 8_2:-21005583 Msa1239370:intron
CAAATTCATAGAGTTTGCCA+CGG 0.640343 8_2:+21008377 None:intergenic
GTGTGTCACAATCAATTTGG+TGG 0.647829 8_2:+21006314 None:intergenic
TGTGAGACTAACTTCATGCA+GGG 0.652522 8_2:-21003812 Msa1239370:CDS
AATCTCTTCAAAGGACTCAG+AGG 0.658923 8_2:-21005536 Msa1239370:intron
CCAAATTGATTGTGACACAC+AGG 0.672500 8_2:-21006311 Msa1239370:intron
AAACCATTGAACGATACCAA+CGG 0.680528 8_2:-21006363 Msa1239370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTTTCAAAAAATTAATAAA+TGG + chr8_2:21003991-21004010 None:intergenic 10.0%
!!! TTTTTATTAATTGTAGTTTT+AGG - chr8_2:21004406-21004425 Msa1239370:intron 10.0%
!!! TTTTATTAATTGTAGTTTTA+GGG - chr8_2:21004407-21004426 Msa1239370:CDS 10.0%
!!! AATTATTTAAAACATGATTT+TGG + chr8_2:21004847-21004866 None:intergenic 10.0%
!!! AGTTCATAATTTTATTTTAT+AGG - chr8_2:21006642-21006661 Msa1239370:intron 10.0%
!!! CTTAGTTTTTTTTTTTTTTT+AGG - chr8_2:21006825-21006844 Msa1239370:intron 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - chr8_2:21006960-21006979 Msa1239370:intron 10.0%
!! AAGAAAAATGTATAAATAAA+GGG - chr8_2:21006961-21006980 Msa1239370:intron 10.0%
!! TAACTATTAAAAATTGAATT+AGG - chr8_2:21007460-21007479 Msa1239370:intron 10.0%
!! TTATTAAAATAAGATCAATA+TGG - chr8_2:21007511-21007530 Msa1239370:intron 10.0%
!! AATAATTGAAATAAAATCAT+AGG + chr8_2:21007735-21007754 None:intergenic 10.0%
!! TACTAATTGAAATTAAAAAA+AGG + chr8_2:21007954-21007973 None:intergenic 10.0%
!!! TTTTTAATTTCAATTAGTAT+AGG - chr8_2:21007955-21007974 Msa1239370:intron 10.0%
!! ATATATTTATTTACTACATT+TGG - chr8_2:21008206-21008225 Msa1239370:intron 10.0%
!!! TTTCTTATAGTTTTGTATTT+TGG - chr8_2:21004075-21004094 Msa1239370:intron 15.0%
!!! TTCTTATAGTTTTGTATTTT+GGG - chr8_2:21004076-21004095 Msa1239370:intron 15.0%
!! AAAAAATTATTAATGTGTCA+TGG + chr8_2:21004390-21004409 None:intergenic 15.0%
!! GAATATATATGAATATTATG+AGG - chr8_2:21004478-21004497 Msa1239370:intron 15.0%
!! AAAGATAATGTAATGTTTAA+AGG - chr8_2:21004594-21004613 Msa1239370:intron 15.0%
!!! ATCATGTTTTAAATAATTGA+AGG - chr8_2:21004849-21004868 Msa1239370:intron 15.0%
!! AAAAGATTAAACGTTTAAAA+GGG + chr8_2:21004941-21004960 None:intergenic 15.0%
!!! TTATTAGAGTATTTTTTTAG+TGG + chr8_2:21004984-21005003 None:intergenic 15.0%
!! TAAAAGAAATATTCTTTCAT+AGG + chr8_2:21005610-21005629 None:intergenic 15.0%
!! TATGTACATTCTTAATTTAT+AGG - chr8_2:21005772-21005791 Msa1239370:intron 15.0%
!!! TGAGAAAAAAAATTTAGTTT+GGG + chr8_2:21005849-21005868 None:intergenic 15.0%
!! AAATAATACTCATAATATGT+GGG + chr8_2:21006332-21006351 None:intergenic 15.0%
!! TAAATAATACTCATAATATG+TGG + chr8_2:21006333-21006352 None:intergenic 15.0%
!! AAAAAAAACTTGAGAAATTT+GGG + chr8_2:21006364-21006383 None:intergenic 15.0%
!!! TTTTTTTTTTTGTCATCTAA+TGG + chr8_2:21006406-21006425 None:intergenic 15.0%
!!! TTGTACATTATTTTTGTTTT+AGG - chr8_2:21006476-21006495 Msa1239370:intron 15.0%
!!! TGTACATTATTTTTGTTTTA+GGG - chr8_2:21006477-21006496 Msa1239370:intron 15.0%
!! AGTTCTATATTTATGTAAAA+GGG + chr8_2:21006807-21006826 None:intergenic 15.0%
!! AAGTTCTATATTTATGTAAA+AGG + chr8_2:21006808-21006827 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG - chr8_2:21006962-21006981 Msa1239370:intron 15.0%
!! AGTATTAATTAGAGTTATAA+AGG - chr8_2:21007020-21007039 Msa1239370:intron 15.0%
!! GTATTAATTAGAGTTATAAA+GGG - chr8_2:21007021-21007040 Msa1239370:intron 15.0%
!! TATTAATTAGAGTTATAAAG+GGG - chr8_2:21007022-21007041 Msa1239370:intron 15.0%
!!! GTCTTTTATATACATATATA+TGG - chr8_2:21007407-21007426 Msa1239370:intron 15.0%
!! ATGTATATAAAACAATGATT+TGG - chr8_2:21007573-21007592 Msa1239370:intron 15.0%
!! TGTATATAAAACAATGATTT+GGG - chr8_2:21007574-21007593 Msa1239370:intron 15.0%
!!! TTAACTAATAAATTTTGACT+TGG + chr8_2:21007760-21007779 None:intergenic 15.0%
!! AGATAATTATTAGAGAAATT+AGG + chr8_2:21007985-21008004 None:intergenic 15.0%
!!! AAAAAAAATCCAATTAGTTT+TGG - chr8_2:21008344-21008363 Msa1239370:intron 15.0%
!!! AAAAAAATCCAATTAGTTTT+GGG - chr8_2:21008345-21008364 Msa1239370:intron 15.0%
!! AAATGATTCTATTAACCATT+GGG + chr8_2:21004049-21004068 None:intergenic 20.0%
!! AAAATGATTCTATTAACCAT+TGG + chr8_2:21004050-21004069 None:intergenic 20.0%
!!! TTAGGGTTCTAATTTTTTTT+AGG - chr8_2:21004424-21004443 Msa1239370:CDS 20.0%
!!! TAGGGTTCTAATTTTTTTTA+GGG - chr8_2:21004425-21004444 Msa1239370:CDS 20.0%
!! TATATGAATATTATGAGGTT+TGG - chr8_2:21004483-21004502 Msa1239370:intron 20.0%
!! TAAACATTACATTATCTTTC+AGG + chr8_2:21004593-21004612 None:intergenic 20.0%
!! AGAAAAAAGAAAAACAGAAA+AGG - chr8_2:21004679-21004698 Msa1239370:intron 20.0%
!! TTAATTCTCACAACAAAATA+TGG - chr8_2:21004892-21004911 Msa1239370:intron 20.0%
!! CAAAAGATTAAACGTTTAAA+AGG + chr8_2:21004942-21004961 None:intergenic 20.0%
!!! CTTTTAAACGTTTAATCTTT+TGG - chr8_2:21004940-21004959 Msa1239370:intron 20.0%
!!! AATGGAAATTAGTCTTAAAT+TGG + chr8_2:21005312-21005331 None:intergenic 20.0%
!! ACTAATTTCCATTCAAAAAA+AGG - chr8_2:21005319-21005338 Msa1239370:intron 20.0%
!!! ATACTTTTCCTTTTTTTGAA+TGG + chr8_2:21005330-21005349 None:intergenic 20.0%
!! TAGGAAAATTCAAATATTTC+TGG + chr8_2:21005738-21005757 None:intergenic 20.0%
!! ACATAATAAAAGAACAAACT+AGG + chr8_2:21005757-21005776 None:intergenic 20.0%
!! GTGAGAAAAAAAATTTAGTT+TGG + chr8_2:21005850-21005869 None:intergenic 20.0%
!!! CTCACTAATACTTTTTTTAA+TGG - chr8_2:21005865-21005884 Msa1239370:intron 20.0%
!! TGATTGTTAATTTAGTAAGA+TGG + chr8_2:21006185-21006204 None:intergenic 20.0%
!!! TGTAAAGTATTTTCGTTTTA+GGG + chr8_2:21006306-21006325 None:intergenic 20.0%
!!! TTGTAAAGTATTTTCGTTTT+AGG + chr8_2:21006307-21006326 None:intergenic 20.0%
!! GAAAAAAAACTTGAGAAATT+TGG + chr8_2:21006365-21006384 None:intergenic 20.0%
!! AAAAGCAATAAAATTAGCAA+CGG + chr8_2:21006523-21006542 None:intergenic 20.0%
!!! ATTGCTTTTTCAACTTTTTT+CGG - chr8_2:21006534-21006553 Msa1239370:intron 20.0%
!!! CACTTTATATAATTCTGTTT+TGG - chr8_2:21006689-21006708 Msa1239370:intron 20.0%
!! GTTCTATATTTATGTAAAAG+GGG + chr8_2:21006806-21006825 None:intergenic 20.0%
!! AAAAGTGGAATATATTGAAT+TGG - chr8_2:21007046-21007065 Msa1239370:intron 20.0%
!! AAAGTGGAATATATTGAATT+GGG - chr8_2:21007047-21007066 Msa1239370:intron 20.0%
!!! TTTTTTTCAATCATTGTTAC+TGG + chr8_2:21007196-21007215 None:intergenic 20.0%
!! AGAAATTATGATTGAACAAA+TGG - chr8_2:21007632-21007651 Msa1239370:intron 20.0%
!!! TGAATTCATGAAAATTTGTT+TGG - chr8_2:21007708-21007727 Msa1239370:intron 20.0%
!! GATCAAGGTTAAATATATAA+AGG - chr8_2:21007904-21007923 Msa1239370:intron 20.0%
!!! AAAAAGGCATATATGTATAA+TGG + chr8_2:21007938-21007957 None:intergenic 20.0%
!! AAATATATGCAAAAAGATGA+AGG + chr8_2:21008194-21008213 None:intergenic 20.0%
! ACTTTCTCAAAAAGAAGAAA+TGG - chr8_2:21003826-21003845 Msa1239370:CDS 25.0%
!!! TTTTATTGCCTATTTTTGTG+AGG - chr8_2:21004016-21004035 Msa1239370:intron 25.0%
! AAATTATTAATGTGTCATGG+AGG + chr8_2:21004387-21004406 None:intergenic 25.0%
!!! AGGGTTCTAATTTTTTTTAG+GGG - chr8_2:21004426-21004445 Msa1239370:CDS 25.0%
! TAAATATGTCGATCTATGAT+TGG + chr8_2:21004515-21004534 None:intergenic 25.0%
!! ACGTTTTCATCAACAAAAAA+AGG + chr8_2:21004551-21004570 None:intergenic 25.0%
! AATAAAGCTGGAAATAAAGA+TGG + chr8_2:21005013-21005032 None:intergenic 25.0%
!!! TTATTTCCAGCTTTATTACA+AGG - chr8_2:21005016-21005035 Msa1239370:CDS 25.0%
! AAAAGTGAAGCTGATTAATT+TGG + chr8_2:21005382-21005401 None:intergenic 25.0%
! TTGAAACTCATAACACATTA+TGG - chr8_2:21005442-21005461 Msa1239370:intron 25.0%
! TCTATGAAAATTATATGCCA+TGG + chr8_2:21005485-21005504 None:intergenic 25.0%
!!! TTCAAATATTTCTGGATTAG+TGG + chr8_2:21005730-21005749 None:intergenic 25.0%
! TACATGCATGTTTAATACTA+CGG - chr8_2:21006112-21006131 Msa1239370:intron 25.0%
!!! TGGTTTTGTTGAAATTATAG+TGG - chr8_2:21006135-21006154 Msa1239370:intron 25.0%
! TGTTAATTTAGTAAGATGGT+GGG + chr8_2:21006181-21006200 None:intergenic 25.0%
! TTGTTAATTTAGTAAGATGG+TGG + chr8_2:21006182-21006201 None:intergenic 25.0%
!!! CTCAAGTTTTTTTTCGTTTT+AGG - chr8_2:21006370-21006389 Msa1239370:CDS 25.0%
! AAAAAAAAAACTCGAGAAAG+TGG - chr8_2:21006417-21006436 Msa1239370:intron 25.0%
! AAAAAAAAACTCGAGAAAGT+GGG - chr8_2:21006418-21006437 Msa1239370:intron 25.0%
! AAATAACACTCATAGTATGT+TGG - chr8_2:21006451-21006470 Msa1239370:intron 25.0%
!!! CATTATTTTTGTTTTAGGGT+CGG - chr8_2:21006481-21006500 Msa1239370:intron 25.0%
!! TTGAAATGACTCAGTTATTT+TGG - chr8_2:21007093-21007112 Msa1239370:intron 25.0%
!!! TGAAATGACTCAGTTATTTT+GGG - chr8_2:21007094-21007113 Msa1239370:intron 25.0%
! CATCTACATATATATATGCA+TGG - chr8_2:21007385-21007404 Msa1239370:intron 25.0%
!! TGTGATACAATTTAGAACAA+TGG - chr8_2:21007544-21007563 Msa1239370:intron 25.0%
!! AATAATTGAAGTGCTTAACT+TGG + chr8_2:21007796-21007815 None:intergenic 25.0%
! TATCCATACTCATATTCATA+GGG + chr8_2:21008130-21008149 None:intergenic 25.0%
! ATATCCATACTCATATTCAT+AGG + chr8_2:21008131-21008150 None:intergenic 25.0%
!!! TTTTGGGTTAGAGTTTTTAA+TGG - chr8_2:21008361-21008380 Msa1239370:intron 25.0%
!! CTAATGTTAACCTCTTTTAT+TGG - chr8_2:21008398-21008417 Msa1239370:CDS 25.0%
!! TCTATGAATTTGGAAGTGTT+GGG - chr8_2:21003929-21003948 Msa1239370:intron 30.0%
TTCTATTAACCATTGGGATT+TGG + chr8_2:21004043-21004062 None:intergenic 30.0%
! GAAACTGATTCAAAGAAGAA+AGG + chr8_2:21004150-21004169 None:intergenic 30.0%
ATCAGTTTCTTTCACCAAAA+TGG - chr8_2:21004161-21004180 Msa1239370:CDS 30.0%
! AAAAGCATACAATTCAGTTG+TGG + chr8_2:21004216-21004235 None:intergenic 30.0%
! TTATCTTTCAGGTGTTGTAA+AGG + chr8_2:21004582-21004601 None:intergenic 30.0%
AGGTTTCAGCTTAGAAATAA+TGG - chr8_2:21004614-21004633 Msa1239370:intron 30.0%
CTGAGAAACAAGAAATATCT+AGG + chr8_2:21004650-21004669 None:intergenic 30.0%
!! TAGAATTTGGAAGTACTCTT+TGG - chr8_2:21005051-21005070 Msa1239370:intron 30.0%
! TGGCTTTTTAGATCAATTTG+AGG - chr8_2:21005071-21005090 Msa1239370:intron 30.0%
CTTAAATTGGTCCAAAGAAA+GGG + chr8_2:21005299-21005318 None:intergenic 30.0%
TCTTAAATTGGTCCAAAGAA+AGG + chr8_2:21005300-21005319 None:intergenic 30.0%
AAATCCTTGTGGTTGAAATT+TGG - chr8_2:21005540-21005559 Msa1239370:CDS 30.0%
AATCCTTGTGGTTGAAATTT+GGG - chr8_2:21005541-21005560 Msa1239370:CDS 30.0%
! GGATTAGTGGAATTTATATG+TGG + chr8_2:21005717-21005736 None:intergenic 30.0%
CATGTAACTTCACAAAATCA+CGG + chr8_2:21006098-21006117 None:intergenic 30.0%
AGGGTTGGAAAAAAAGATTA+CGG + chr8_2:21006287-21006306 None:intergenic 30.0%
!!! AAGTATTTTCGTTTTAGGGT+TGG + chr8_2:21006302-21006321 None:intergenic 30.0%
!!! GTTTTTTTTCGTTTTAGGAG+CGG - chr8_2:21006375-21006394 Msa1239370:intron 30.0%
!!! TTTTTTTTCGTTTTAGGAGC+GGG - chr8_2:21006376-21006395 Msa1239370:intron 30.0%
AAAAAAAACTCGAGAAAGTG+GGG - chr8_2:21006419-21006438 Msa1239370:intron 30.0%
CAAAGTATGAATCTCTTCAA+AGG - chr8_2:21006750-21006769 Msa1239370:intron 30.0%
AGTAAATGACTCAGTTAATC+CGG - chr8_2:21007129-21007148 Msa1239370:intron 30.0%
CCTGAAATGACATTACATAT+TGG + chr8_2:21007252-21007271 None:intergenic 30.0%
! CCAATATGTAATGTCATTTC+AGG - chr8_2:21007249-21007268 Msa1239370:intron 30.0%
AATCTTGAAAAACAGCTTGA+AGG - chr8_2:21007320-21007339 Msa1239370:intron 30.0%
! TTCAATTTCAACCATTTTCC+AGG - chr8_2:21007847-21007866 Msa1239370:intron 30.0%
ATGTACCCTATTTGCAAAAA+GGG + chr8_2:21008164-21008183 None:intergenic 30.0%
AACTCTAACCCAAAACTAAT+TGG + chr8_2:21008356-21008375 None:intergenic 30.0%
!! TTTTTGAGAAAGTTACCTGC+CGG + chr8_2:21003819-21003838 None:intergenic 35.0%
ACGGCTAGAGAAAATGATAA+GGG + chr8_2:21003902-21003921 None:intergenic 35.0%
CAAATTCATAGAGTTTGCCA+CGG + chr8_2:21003921-21003940 None:intergenic 35.0%
! CTCTATGAATTTGGAAGTGT+TGG - chr8_2:21003928-21003947 Msa1239370:intron 35.0%
GATTTGGACCTCACAAAAAT+AGG + chr8_2:21004027-21004046 None:intergenic 35.0%
TCTTTCACCAAAATGGTTAC+TGG - chr8_2:21004168-21004187 Msa1239370:CDS 35.0%
! CAGAAAACCAGTAACCATTT+TGG + chr8_2:21004178-21004197 None:intergenic 35.0%
TGTACTGTTGTGTAAGATCT+AGG - chr8_2:21004814-21004833 Msa1239370:intron 35.0%
GTACTGTTGTGTAAGATCTA+GGG - chr8_2:21004815-21004834 Msa1239370:intron 35.0%
!! TTTCCAGCTTTATTACAAGG+TGG - chr8_2:21005019-21005038 Msa1239370:CDS 35.0%
!! GCAAGATGATTTTGATGCTA+AGG - chr8_2:21005215-21005234 Msa1239370:intron 35.0%
GCTAAGGTCTTACAAATCAT+TGG - chr8_2:21005231-21005250 Msa1239370:intron 35.0%
! AAGGGAAGGAAACTTTTGAA+TGG + chr8_2:21005281-21005300 None:intergenic 35.0%
AAAGTTTCCTTCCCTTTCTT+TGG - chr8_2:21005285-21005304 Msa1239370:intron 35.0%
TCAACCACAAGGATTTCATA+GGG + chr8_2:21005536-21005555 None:intergenic 35.0%
TTCAACCACAAGGATTTCAT+AGG + chr8_2:21005537-21005556 None:intergenic 35.0%
TAACCCAAATTTCAACCACA+AGG + chr8_2:21005547-21005566 None:intergenic 35.0%
CAAGAGTAAAGAAACACAGT+AGG - chr8_2:21005670-21005689 Msa1239370:intron 35.0%
! TTGGTATCGTTCAATGGTTT+TGG + chr8_2:21005932-21005951 None:intergenic 35.0%
AAACCATTGAACGATACCAA+CGG - chr8_2:21005932-21005951 Msa1239370:intron 35.0%
ATGCATGTTTAATACTACGG+TGG - chr8_2:21006115-21006134 Msa1239370:intron 35.0%
ATAAGTGTGAAATGAGCCAA+GGG + chr8_2:21006940-21006959 None:intergenic 35.0%
AATAAGTGTGAAATGAGCCA+AGG + chr8_2:21006941-21006960 None:intergenic 35.0%
GAGTTATAAAGGGGAAAAAG+TGG - chr8_2:21007031-21007050 Msa1239370:intron 35.0%
GTAAATGACTCAGTTAATCC+GGG - chr8_2:21007130-21007149 Msa1239370:intron 35.0%
TCTTGGACCTTTGAACATAA+AGG - chr8_2:21007289-21007308 Msa1239370:intron 35.0%
TGCAACTCCTTTATGTTCAA+AGG + chr8_2:21007299-21007318 None:intergenic 35.0%
AAATGGAAGAGCTTCGTAAA+AGG - chr8_2:21007649-21007668 Msa1239370:intron 35.0%
AATGGAAGAGCTTCGTAAAA+GGG - chr8_2:21007650-21007669 Msa1239370:intron 35.0%
GAGAATTGAACAAGCAACTA+AGG - chr8_2:21007882-21007901 Msa1239370:intron 35.0%
GGGATTTAATCTTAAGGCAA+TGG - chr8_2:21008037-21008056 Msa1239370:intron 35.0%
TTAAGGCAATGGAAAGTTTG+TGG - chr8_2:21008048-21008067 Msa1239370:intron 35.0%
!! ATATTCATAGGGTTGGTTTG+AGG + chr8_2:21008119-21008138 None:intergenic 35.0%
CATACTCATATTCATAGGGT+TGG + chr8_2:21008126-21008145 None:intergenic 35.0%
CAACCCTATGAATATGAGTA+TGG - chr8_2:21008124-21008143 Msa1239370:intron 35.0%
! CAGAACCCTTTTTGCAAATA+GGG - chr8_2:21008156-21008175 Msa1239370:intron 35.0%
CATGTACCCTATTTGCAAAA+AGG + chr8_2:21008165-21008184 None:intergenic 35.0%
TGGTATCTGTCCAATAAAAG+AGG + chr8_2:21008411-21008430 None:intergenic 35.0%
ATGCTCTTGGAAACATTAGA+TGG + chr8_2:21008459-21008478 None:intergenic 35.0%
ATCTAATGTTTCCAAGAGCA+TGG - chr8_2:21008458-21008477 Msa1239370:CDS 35.0%
CACGGCTAGAGAAAATGATA+AGG + chr8_2:21003903-21003922 None:intergenic 40.0%
! CTTATCATTTTCTCTAGCCG+TGG - chr8_2:21003901-21003920 Msa1239370:intron 40.0%
CGTGGCAAACTCTATGAATT+TGG - chr8_2:21003919-21003938 Msa1239370:intron 40.0%
! TCCTTTTCTGGATCAGTTGA+TGG - chr8_2:21004352-21004371 Msa1239370:intron 40.0%
TCCATCAACTGATCCAGAAA+AGG + chr8_2:21004356-21004375 None:intergenic 40.0%
CTTTATTACAAGGTGGAGCA+GGG - chr8_2:21005026-21005045 Msa1239370:CDS 40.0%
AATTGGTCCAAAGAAAGGGA+AGG + chr8_2:21005295-21005314 None:intergenic 40.0%
!! TGTGAATGTGTTGACTTCCA+TGG - chr8_2:21005465-21005484 Msa1239370:intron 40.0%
AAAGCCCTATGAAATCCTTG+TGG - chr8_2:21005529-21005548 Msa1239370:intron 40.0%
AAAGAAACACAGTAGGTACC+TGG - chr8_2:21005677-21005696 Msa1239370:intron 40.0%
AAGAAACACAGTAGGTACCT+GGG - chr8_2:21005678-21005697 Msa1239370:intron 40.0%
GTGTGTCACAATCAATTTGG+TGG + chr8_2:21005984-21006003 None:intergenic 40.0%
CCTGTGTGTCACAATCAATT+TGG + chr8_2:21005987-21006006 None:intergenic 40.0%
CCAAATTGATTGTGACACAC+AGG - chr8_2:21005984-21006003 Msa1239370:intron 40.0%
GTAACTTCACAAAATCACGG+TGG + chr8_2:21006095-21006114 None:intergenic 40.0%
TCTCTCTAGTGCATTGAGAT+TGG + chr8_2:21006238-21006257 None:intergenic 40.0%
AATCTCTTCAAAGGACTCAG+AGG - chr8_2:21006759-21006778 Msa1239370:intron 40.0%
! CTCAATTAATTTGGGACGGA+GGG + chr8_2:21006917-21006936 None:intergenic 40.0%
! AGGGCTCAATTAATTTGGGA+CGG + chr8_2:21006921-21006940 None:intergenic 40.0%
TCCCAAATTAATTGAGCCCT+TGG - chr8_2:21006921-21006940 Msa1239370:intron 40.0%
GCCAAGGGCTCAATTAATTT+GGG + chr8_2:21006925-21006944 None:intergenic 40.0%
AGCCAAGGGCTCAATTAATT+TGG + chr8_2:21006926-21006945 None:intergenic 40.0%
TAGATGACGTTCCTGGAAAA+TGG + chr8_2:21007861-21007880 None:intergenic 40.0%
! ATTTTCCAGGAACGTCATCT+AGG - chr8_2:21007860-21007879 Msa1239370:intron 40.0%
GAACAAGCAACTAAGGATCA+AGG - chr8_2:21007889-21007908 Msa1239370:intron 40.0%
! AAAACTCCATTTTCAGCTCG+AGG - chr8_2:21008010-21008029 Msa1239370:intron 40.0%
! AAACTCCATTTTCAGCTCGA+GGG - chr8_2:21008011-21008030 Msa1239370:intron 40.0%
GGGAGAGGGATTTAATCTTA+AGG - chr8_2:21008031-21008050 Msa1239370:intron 40.0%
TTTGCAAAAAGGGTTCTGCT+TGG + chr8_2:21008154-21008173 None:intergenic 40.0%
! GCAGAACCCTTTTTGCAAAT+AGG - chr8_2:21008155-21008174 Msa1239370:intron 40.0%
CTTGAACATACTGGTACTGT+TGG + chr8_2:21008431-21008450 None:intergenic 40.0%
TTGTGAGACTAACTTCATGC+AGG - chr8_2:21008482-21008501 Msa1239370:CDS 40.0%
TGTGAGACTAACTTCATGCA+GGG - chr8_2:21008483-21008502 Msa1239370:CDS 40.0%
TTGTGAGGTCCAAATCCCAA+TGG - chr8_2:21004031-21004050 Msa1239370:intron 45.0%
CCAGAAAAGGAGAGAGATGA+GGG + chr8_2:21004343-21004362 None:intergenic 45.0%
TCCAGAAAAGGAGAGAGATG+AGG + chr8_2:21004344-21004363 None:intergenic 45.0%
GCTCCACCTTGTAATAAAGC+TGG + chr8_2:21005025-21005044 None:intergenic 45.0%
! GCTTTATTACAAGGTGGAGC+AGG - chr8_2:21005025-21005044 Msa1239370:CDS 45.0%
! GTGGAGCAGGGTTTAGAATT+TGG - chr8_2:21005038-21005057 Msa1239370:intron 45.0%
GTGGACAAAATTACACACCC+AGG + chr8_2:21005698-21005717 None:intergenic 45.0%
! GAGGATTAAATGAGCACCGT+TGG + chr8_2:21005951-21005970 None:intergenic 45.0%
! ATTTGGTGGTCATCTTGCTG+AGG + chr8_2:21005970-21005989 None:intergenic 45.0%
!!! TCTGTTTTGGCAAGCAGAGT+TGG - chr8_2:21006702-21006721 Msa1239370:intron 45.0%
CCTTCAGCTTAGAAACCTCT+TGG + chr8_2:21006730-21006749 None:intergenic 45.0%
CCAAGAGGTTTCTAAGCTGA+AGG - chr8_2:21006727-21006746 Msa1239370:intron 45.0%
! GCTCAATTAATTTGGGACGG+AGG + chr8_2:21006918-21006937 None:intergenic 45.0%
ATGACTCAGTTAATCCGGGA+CGG - chr8_2:21007134-21007153 Msa1239370:intron 45.0%
! TGTCATTTCAGGCAGTTGCT+TGG - chr8_2:21007260-21007279 Msa1239370:intron 45.0%
GTCATTTCAGGCAGTTGCTT+GGG - chr8_2:21007261-21007280 Msa1239370:intron 45.0%
TCATTTCAGGCAGTTGCTTG+GGG - chr8_2:21007262-21007281 Msa1239370:intron 45.0%
AAGGTGCATTAGCACAAGCT+AGG - chr8_2:21007339-21007358 Msa1239370:intron 45.0%
AGCACAAGCTAGGCAAAGAA+AGG - chr8_2:21007349-21007368 Msa1239370:intron 45.0%
ATTCTCCTAGATGACGTTCC+TGG + chr8_2:21007868-21007887 None:intergenic 45.0%
! TGGAGCTCTAATTCAGTTGC+TGG - chr8_2:21008068-21008087 Msa1239370:intron 45.0%
!! GTTGGTTTGAGGTGTCTGAA+AGG + chr8_2:21008108-21008127 None:intergenic 45.0%
ATGGCTCAGCTTGAACATAC+TGG + chr8_2:21008440-21008459 None:intergenic 45.0%
AGACTAACTTCATGCAGGGA+TGG - chr8_2:21008487-21008506 Msa1239370:CDS 45.0%
! CCCTCATCTCTCTCCTTTTC+TGG - chr8_2:21004340-21004359 Msa1239370:intron 50.0%
GCACCGTTGGTATCGTTCAA+TGG + chr8_2:21005938-21005957 None:intergenic 50.0%
!! CAAGCAGAGTTGGTACCAAG+AGG - chr8_2:21006712-21006731 Msa1239370:intron 50.0%
AACATATACTCCCTCCGTCC+CGG + chr8_2:21007151-21007170 None:intergenic 50.0%
CAGTTGCTTGGGGAAGATCT+TGG - chr8_2:21007272-21007291 Msa1239370:intron 50.0%
! CATTTTCAGCTCGAGGGAGA+GGG - chr8_2:21008017-21008036 Msa1239370:intron 50.0%
AGTCTCACAAGCCATGCTCT+TGG + chr8_2:21008472-21008491 None:intergenic 50.0%
ACTCAGTTAATCCGGGACGG+AGG - chr8_2:21007137-21007156 Msa1239370:intron 55.0%
CTCAGTTAATCCGGGACGGA+GGG - chr8_2:21007138-21007157 Msa1239370:intron 55.0%
CCTCTCCCTCGAGCTGAAAA+TGG + chr8_2:21008019-21008038 None:intergenic 55.0%
! CCATTTTCAGCTCGAGGGAG+AGG - chr8_2:21008016-21008035 Msa1239370:intron 55.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 21003802 21008515 21003802 ID=Msa1239370;Name=Msa1239370
chr8_2 mRNA 21003802 21008515 21003802 ID=Msa1239370-mRNA-1;Parent=Msa1239370;Name=Msa1239370-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|1|0.75|1|1|0.75|8|0|240
chr8_2 exon 21003802 21003892 21003802 ID=Msa1239370-mRNA-1:exon:7587;Parent=Msa1239370-mRNA-1
chr8_2 exon 21004140 21004291 21004140 ID=Msa1239370-mRNA-1:exon:7586;Parent=Msa1239370-mRNA-1
chr8_2 exon 21004407 21004448 21004407 ID=Msa1239370-mRNA-1:exon:7585;Parent=Msa1239370-mRNA-1
chr8_2 exon 21004646 21004687 21004646 ID=Msa1239370-mRNA-1:exon:7584;Parent=Msa1239370-mRNA-1
chr8_2 exon 21004947 21005046 21004947 ID=Msa1239370-mRNA-1:exon:7583;Parent=Msa1239370-mRNA-1
chr8_2 exon 21005537 21005598 21005537 ID=Msa1239370-mRNA-1:exon:7582;Parent=Msa1239370-mRNA-1
chr8_2 exon 21006312 21006393 21006312 ID=Msa1239370-mRNA-1:exon:7581;Parent=Msa1239370-mRNA-1
chr8_2 exon 21008367 21008515 21008367 ID=Msa1239370-mRNA-1:exon:7580;Parent=Msa1239370-mRNA-1
chr8_2 CDS 21008367 21008515 21008367 ID=Msa1239370-mRNA-1:cds;Parent=Msa1239370-mRNA-1
chr8_2 CDS 21006312 21006393 21006312 ID=Msa1239370-mRNA-1:cds;Parent=Msa1239370-mRNA-1
chr8_2 CDS 21005537 21005598 21005537 ID=Msa1239370-mRNA-1:cds;Parent=Msa1239370-mRNA-1
chr8_2 CDS 21004947 21005046 21004947 ID=Msa1239370-mRNA-1:cds;Parent=Msa1239370-mRNA-1
chr8_2 CDS 21004646 21004687 21004646 ID=Msa1239370-mRNA-1:cds;Parent=Msa1239370-mRNA-1
chr8_2 CDS 21004407 21004448 21004407 ID=Msa1239370-mRNA-1:cds;Parent=Msa1239370-mRNA-1
chr8_2 CDS 21004140 21004291 21004140 ID=Msa1239370-mRNA-1:cds;Parent=Msa1239370-mRNA-1
chr8_2 CDS 21003802 21003892 21003802 ID=Msa1239370-mRNA-1:cds;Parent=Msa1239370-mRNA-1
Gene Sequence

>Msa1239370

GAGAACAAAATAAACCGGCAGGTAACTTTCTCAAAAAGAAGAAATGGTTTGCTCAAGAAAGCTTATGAACTGTCTGTTCTCTGTGATGCTGAAGTTGCCCTTATCATTTTCTCTAGCCGTGGCAAACTCTATGAATTTGGAAGTGTTGGAACTACCAAAACCATTGAACGATACCAACGGTGCTCATTTAATCCTCAGCAAGATGACCACCAAATTGATTGTGACACACAGAGTTGGTACCAAGAGGTTTCTAAGCTGAAGGCAAAGTATGAATCTCTTCAAAGGACTCAGAGGCAGTTGCTTGGGGAAGATCTTGGACCTTTGAACATAAAGGAGTTGCAGAATCTTGAAAAACAGCTTGAAGGTGCATTAGCACAAGCTAGGCAAAGAAAGACAGAAATTATGATTGAACAAATGGAAGAGCTTCGTAAAAGGGAACGTCATCTAGGAGAATTGAACAAGCAACTAAGGATCAAGCTCGAGGGAGAGGGATTTAATCTTAAGGCAATGGAAAGTTTGTGGAGCTCTAATTCAGTTGCTGGAAATAGCAACTTTACCTTTCAGACACCTCAAACCAACCCTATGAATATGAGTATGGATATCCAAGCAGAACCCTTTTTGCAAATAGGATACCAACAGTACCAGTATGTTCAAGCTGAGCCATCTAATGTTTCCAAGAGCATGGCTTGTGAGACTAACTTCATGCAGGGATGGATGCTT
Protein sequence

>Msa1239370

ENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVGTTKTIERYQRCSFNPQQDDHQIDCDTQSWYQEVSKLKAKYESLQRTQRQLLGEDLGPLNIKELQNLEKQLEGALAQARQRKTEIMIEQMEELRKRERHLGELNKQLRIKLEGEGFNLKAMESLWSSNSVAGNSNFTFQTPQTNPMNMSMDIQAEPFLQIGYQQYQYVQAEPSNVSKSMACETNFMQGWML