Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240140 | XP_004510954.1 | 54.341 | 668 | 180 | 11 | 1 | 544 | 1 | 667 | 0.0 | 580 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240140 | sp|Q10EL1|C3H24_ORYSJ | 41.161 | 379 | 150 | 14 | 209 | 520 | 331 | 703 | 6.06e-59 | 212 |
| Msa1240140 | sp|Q10EL1|C3H24_ORYSJ | 48.026 | 152 | 74 | 1 | 3 | 154 | 58 | 204 | 1.01e-27 | 121 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240140 | A0A1S2YWC5 | 54.341 | 668 | 180 | 11 | 1 | 544 | 1 | 667 | 0.0 | 580 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1240140 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240140 | MtrunA17_Chr1g0171151 | 61.969 | 589 | 105 | 9 | 1 | 470 | 17 | 605 | 0.0 | 578 |
| Msa1240140 | MtrunA17_Chr3g0088521 | 41.354 | 694 | 240 | 23 | 1 | 543 | 31 | 708 | 6.47e-113 | 352 |
| Msa1240140 | MtrunA17_Chr7g0257831 | 38.519 | 675 | 253 | 26 | 1 | 530 | 33 | 690 | 2.61e-104 | 329 |
| Msa1240140 | MtrunA17_Chr5g0437251 | 35.127 | 316 | 158 | 5 | 15 | 286 | 30 | 342 | 5.70e-50 | 182 |
| Msa1240140 | MtrunA17_Chr5g0430211 | 35.276 | 326 | 158 | 4 | 15 | 288 | 35 | 359 | 1.56e-46 | 173 |
| Msa1240140 | MtrunA17_Chr1g0187591 | 29.520 | 542 | 304 | 15 | 14 | 495 | 32 | 555 | 1.08e-45 | 170 |
| Msa1240140 | MtrunA17_Chr3g0113651 | 35.507 | 276 | 155 | 6 | 14 | 273 | 9 | 277 | 2.34e-42 | 159 |
| Msa1240140 | MtrunA17_Chr3g0092171 | 33.414 | 413 | 164 | 15 | 1 | 334 | 69 | 449 | 3.35e-41 | 155 |
| Msa1240140 | MtrunA17_Chr3g0105101 | 37.063 | 286 | 155 | 8 | 1 | 276 | 11 | 281 | 3.32e-40 | 150 |
| Msa1240140 | MtrunA17_Chr3g0105131 | 31.158 | 475 | 290 | 14 | 36 | 495 | 37 | 489 | 4.53e-38 | 146 |
| Msa1240140 | MtrunA17_Chr3g0092221 | 40.523 | 153 | 71 | 2 | 209 | 341 | 208 | 360 | 2.12e-26 | 111 |
| Msa1240140 | MtrunA17_Chr3g0105141 | 52.632 | 57 | 27 | 0 | 209 | 265 | 87 | 143 | 1.77e-17 | 80.1 |
| Msa1240140 | MtrunA17_Chr6g0487481 | 59.259 | 54 | 22 | 0 | 209 | 262 | 153 | 206 | 2.54e-17 | 84.0 |
| Msa1240140 | MtrunA17_Chr8g0389561 | 50.769 | 65 | 32 | 0 | 209 | 273 | 131 | 195 | 4.23e-17 | 83.2 |
| Msa1240140 | MtrunA17_Chr2g0324781 | 51.786 | 56 | 27 | 0 | 209 | 264 | 127 | 182 | 1.08e-16 | 82.4 |
| Msa1240140 | MtrunA17_Chr3g0105121 | 40.860 | 93 | 50 | 1 | 208 | 295 | 59 | 151 | 7.65e-16 | 79.3 |
| Msa1240140 | MtrunA17_Chr3g0135351 | 50.877 | 57 | 28 | 0 | 206 | 262 | 101 | 157 | 3.03e-15 | 76.3 |
| Msa1240140 | MtrunA17_Chr4g0040391 | 44.444 | 54 | 30 | 0 | 209 | 262 | 110 | 163 | 2.32e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240140 | AT5G58620.1 | 30.523 | 593 | 305 | 16 | 12 | 516 | 11 | 584 | 5.23e-56 | 198 |
| Msa1240140 | AT5G12850.1 | 38.978 | 372 | 145 | 16 | 209 | 518 | 307 | 658 | 5.94e-54 | 194 |
| Msa1240140 | AT5G12850.1 | 50.000 | 144 | 70 | 1 | 11 | 154 | 38 | 179 | 2.03e-38 | 150 |
| Msa1240140 | AT2G40140.2 | 29.542 | 589 | 290 | 16 | 15 | 530 | 33 | 569 | 1.02e-53 | 192 |
| Msa1240140 | AT2G40140.1 | 29.542 | 589 | 290 | 16 | 15 | 530 | 33 | 569 | 1.02e-53 | 192 |
| Msa1240140 | AT2G41900.1 | 39.386 | 391 | 143 | 16 | 209 | 529 | 311 | 677 | 9.81e-53 | 191 |
| Msa1240140 | AT2G41900.1 | 51.299 | 154 | 74 | 1 | 1 | 154 | 34 | 186 | 5.41e-45 | 169 |
| Msa1240140 | AT3G55980.1 | 34.069 | 317 | 165 | 6 | 15 | 293 | 30 | 340 | 1.04e-45 | 169 |
| Msa1240140 | AT3G55980.2 | 34.069 | 317 | 165 | 6 | 15 | 293 | 97 | 407 | 1.44e-45 | 170 |
| Msa1240140 | AT2G25900.2 | 57.143 | 56 | 24 | 0 | 209 | 264 | 140 | 195 | 3.34e-19 | 89.0 |
| Msa1240140 | AT2G25900.1 | 57.143 | 56 | 24 | 0 | 209 | 264 | 140 | 195 | 3.34e-19 | 89.0 |
| Msa1240140 | AT1G03790.1 | 38.095 | 126 | 66 | 3 | 158 | 274 | 79 | 201 | 2.10e-17 | 84.7 |
| Msa1240140 | AT2G19810.1 | 52.632 | 57 | 27 | 0 | 209 | 265 | 128 | 184 | 5.40e-17 | 83.2 |
| Msa1240140 | AT4G29190.1 | 50.909 | 55 | 27 | 0 | 209 | 263 | 129 | 183 | 9.13e-16 | 79.3 |
| Msa1240140 | AT5G44260.1 | 47.692 | 65 | 31 | 1 | 200 | 264 | 105 | 166 | 4.69e-15 | 77.4 |
| Msa1240140 | AT5G07500.1 | 50.943 | 53 | 26 | 0 | 209 | 261 | 102 | 154 | 7.80e-13 | 68.9 |
Find 116 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACAGACCCATGGTCTTATT+TGG | 0.112209 | 8_2:-22500252 | Msa1240140:CDS |
| CCTTTCAAGCCTTGCATATT+AGG | 0.156225 | 8_2:+22501459 | None:intergenic |
| AACAACTGAGGAAGGGATTT+TGG | 0.189164 | 8_2:+22500283 | None:intergenic |
| AGACGATGCTCAACTTTCTT+TGG | 0.209782 | 8_2:+22500458 | None:intergenic |
| AGGGGACTAGTTGTGATAAA+AGG | 0.245519 | 8_2:-22501024 | Msa1240140:CDS |
| CACTTCTCTTTAATCATCTT+AGG | 0.282189 | 8_2:+22500083 | None:intergenic |
| AGTTCTCGAGAAACTTCTTT+TGG | 0.284620 | 8_2:-22501436 | Msa1240140:CDS |
| AATAGATTAAATTTGTGAAT+TGG | 0.288759 | 8_2:+22500019 | None:intergenic |
| TTGATGGTTGCTGCTACTTA+TGG | 0.295175 | 8_2:-22501693 | Msa1240140:CDS |
| TGTTTCTTCTCAGTAAATTT+CGG | 0.296317 | 8_2:+22501276 | None:intergenic |
| GAGATTGGTTCAAGACTTCT+AGG | 0.304933 | 8_2:+22500392 | None:intergenic |
| GCCCTTCACTATGTTGCTTC+TGG | 0.308832 | 8_2:-22501591 | Msa1240140:CDS |
| ATGTTTGATTGGTCCGTAAA+TGG | 0.311412 | 8_2:-22500215 | Msa1240140:CDS |
| ACTTAGTTCGTCTCCATTTA+CGG | 0.315395 | 8_2:+22500202 | None:intergenic |
| TGCTGCTGCAATGAATCTTT+TGG | 0.317820 | 8_2:-22500891 | Msa1240140:intron |
| CAATTAACGAGGTGGGGATT+TGG | 0.323539 | 8_2:-22501767 | Msa1240140:CDS |
| AATTTAGGAAAGGGGCTTGT+AGG | 0.332058 | 8_2:-22501129 | Msa1240140:intron |
| TGAGCACAAAACTCCTTTGA+TGG | 0.333522 | 8_2:-22501709 | Msa1240140:CDS |
| TGTTGGTGACTTCTCTATTT+CGG | 0.334204 | 8_2:-22501391 | Msa1240140:CDS |
| AAGAGATCTTCAAGATTTGA+TGG | 0.337434 | 8_2:+22500614 | None:intergenic |
| AACTGAAGAGTGTTAGTTCT+AGG | 0.342883 | 8_2:-22500316 | Msa1240140:CDS |
| AAAATCCCTTCCTCAGTTGT+TGG | 0.358560 | 8_2:-22500281 | Msa1240140:CDS |
| ATTTGGTACGGTCGACAAAA+TGG | 0.359038 | 8_2:-22501750 | Msa1240140:CDS |
| ATGAGGATGTATTCTGCATT+TGG | 0.385658 | 8_2:+22500177 | None:intergenic |
| TCCTAGTTCTAGTCGGTCTA+AGG | 0.397408 | 8_2:-22500645 | Msa1240140:CDS |
| CTGCCTTCGTTAACTAGATC+TGG | 0.406650 | 8_2:-22500962 | Msa1240140:CDS |
| ACAGACCCATGGTCTTATTT+GGG | 0.407519 | 8_2:-22500251 | Msa1240140:CDS |
| TGAGGGCTCATTGAGGAGAT+TGG | 0.413555 | 8_2:+22500377 | None:intergenic |
| CATTGCTGGGTCAGAATACT+TGG | 0.414751 | 8_2:+22500568 | None:intergenic |
| AATCTAGCAGAAGATGTGAT+AGG | 0.419792 | 8_2:+22500047 | None:intergenic |
| CCTAATATGCAAGGCTTGAA+AGG | 0.433365 | 8_2:-22501459 | Msa1240140:CDS |
| GGCGACACTGAAGGAGAGTA+TGG | 0.454326 | 8_2:+22501318 | None:intergenic |
| CGCCTAATGAGATGTTTGAT+TGG | 0.454473 | 8_2:-22500226 | Msa1240140:CDS |
| TCAATTGGTGTCCCTTCATT+CGG | 0.455164 | 8_2:-22500425 | Msa1240140:CDS |
| GGGGACTAGTTGTGATAAAA+GGG | 0.457864 | 8_2:-22501023 | Msa1240140:CDS |
| CGTCTGTCACAGTCTTCAAT+TGG | 0.460123 | 8_2:-22500440 | Msa1240140:CDS |
| GGAACAACGATGACATCAAC+AGG | 0.461567 | 8_2:+22501483 | None:intergenic |
| CTTCACTATGTTGCTTCTGG+TGG | 0.463871 | 8_2:-22501588 | Msa1240140:CDS |
| TGGTAGTATTGATGTTATGA+AGG | 0.465621 | 8_2:-22501673 | Msa1240140:CDS |
| ACGAAGAGCCTCATCTATCA+TGG | 0.468682 | 8_2:-22500133 | Msa1240140:CDS |
| TTCACTATGTTGCTTCTGGT+GGG | 0.469531 | 8_2:-22501587 | Msa1240140:CDS |
| ATGTGCTGAGCTATTTAGAT+TGG | 0.473706 | 8_2:-22500712 | Msa1240140:CDS |
| AGGATTCCTTCAGTAGGACT+TGG | 0.476658 | 8_2:+22500108 | None:intergenic |
| GACGGCATATTAGTATTTGA+AGG | 0.485410 | 8_2:+22500482 | None:intergenic |
| CGAAGCAAGTACTAGTAAGC+TGG | 0.486150 | 8_2:+22501842 | None:intergenic |
| GAGGAAATGCATACATTTGA+GGG | 0.492219 | 8_2:+22500360 | None:intergenic |
| CTCATGGAATATTCAAGTGC+TGG | 0.492428 | 8_2:-22501084 | Msa1240140:CDS |
| TGAGGAAATGCATACATTTG+AGG | 0.493617 | 8_2:+22500359 | None:intergenic |
| TGCTCAACTTTCTTTGGAGA+CGG | 0.493672 | 8_2:+22500464 | None:intergenic |
| ATAGCTCAGCACATTGAAGT+TGG | 0.494530 | 8_2:+22500721 | None:intergenic |
| TCGAACACGACTCTGTAAAG+AGG | 0.495482 | 8_2:-22501044 | Msa1240140:CDS |
| TTGAGCTGTTTCTCAAAAGC+CGG | 0.496747 | 8_2:-22500668 | Msa1240140:CDS |
| GCCTCTGATAATAGATCTGT+TGG | 0.506636 | 8_2:-22501408 | Msa1240140:CDS |
| AGGAAAGGGGCTTGTAGGCA+TGG | 0.515731 | 8_2:-22501124 | Msa1240140:CDS |
| CTTCTTCAATTAACGAGGTG+GGG | 0.517672 | 8_2:-22501773 | Msa1240140:CDS |
| GCGAAGATTCTTATATCTGC+GGG | 0.517780 | 8_2:-22501543 | Msa1240140:CDS |
| AACAGCTCAAGTCACTCATA+AGG | 0.519911 | 8_2:+22500681 | None:intergenic |
| TTCAAGCCTTGCATATTAGG+AGG | 0.531465 | 8_2:+22501462 | None:intergenic |
| GCTTCTTCAATTAACGAGGT+GGG | 0.531800 | 8_2:-22501774 | Msa1240140:CDS |
| CTCTTTAATCATCTTAGGTG+AGG | 0.532869 | 8_2:+22500088 | None:intergenic |
| ATCTAGCAGAAGATGTGATA+GGG | 0.545866 | 8_2:+22500048 | None:intergenic |
| GAAGCAAGTACTAGTAAGCT+GGG | 0.551582 | 8_2:+22501843 | None:intergenic |
| ACTGAAGAGTGTTAGTTCTA+GGG | 0.551618 | 8_2:-22500315 | Msa1240140:CDS |
| GGTGATCCAACAACTGAGGA+AGG | 0.555330 | 8_2:+22500275 | None:intergenic |
| GACCAATCAAACATCTCATT+AGG | 0.557481 | 8_2:+22500224 | None:intergenic |
| TAGCAGCTGATTCACGTGAA+GGG | 0.557874 | 8_2:+22500531 | None:intergenic |
| AACGAGGTGGGGATTTGGTA+CGG | 0.563680 | 8_2:-22501762 | Msa1240140:CDS |
| TAAGTAGCAGCAACCATCAA+AGG | 0.566012 | 8_2:+22501696 | None:intergenic |
| CGAACACGACTCTGTAAAGA+GGG | 0.566742 | 8_2:-22501043 | Msa1240140:CDS |
| GCCTTAGACCGACTAGAACT+AGG | 0.573068 | 8_2:+22500644 | None:intergenic |
| GGTGACATGCTACCGAATGA+AGG | 0.573431 | 8_2:+22500413 | None:intergenic |
| AAATAAGACCATGGGTCTGT+AGG | 0.574531 | 8_2:+22500254 | None:intergenic |
| TTCGGATCCACTACAAGAGA+AGG | 0.576380 | 8_2:+22501294 | None:intergenic |
| GTTAGTTGTGTCGATAGCAA+TGG | 0.577902 | 8_2:-22501513 | Msa1240140:CDS |
| AGCAGCTGATTCACGTGAAG+GGG | 0.579111 | 8_2:+22500532 | None:intergenic |
| GCTTCGTACAATGACTCTGA+AGG | 0.579529 | 8_2:-22501825 | Msa1240140:CDS |
| ATAGCAGCTGATTCACGTGA+AGG | 0.579797 | 8_2:+22500530 | None:intergenic |
| AGCTTCTTCAATTAACGAGG+TGG | 0.579937 | 8_2:-22501775 | Msa1240140:CDS |
| TTGCCCTGAATTTAGGAAAG+GGG | 0.586309 | 8_2:-22501137 | Msa1240140:intron |
| GATAAGTGTGAATATGCTCA+TGG | 0.587938 | 8_2:-22501100 | Msa1240140:CDS |
| GTTGTTCCTCCTAATATGCA+AGG | 0.592085 | 8_2:-22501468 | Msa1240140:CDS |
| GTCGCCGCCTTCTCTTGTAG+TGG | 0.592373 | 8_2:-22501301 | Msa1240140:CDS |
| GTGACATGCTACCGAATGAA+GGG | 0.596307 | 8_2:+22500414 | None:intergenic |
| AGAGAAGGCGGCGACACTGA+AGG | 0.596334 | 8_2:+22501309 | None:intergenic |
| CGAAGAGCCTCATCTATCAT+GGG | 0.597163 | 8_2:-22500132 | Msa1240140:CDS |
| TGTATGCATTTCCTCATCGC+GGG | 0.600220 | 8_2:-22500352 | Msa1240140:CDS |
| CACCAGAAGCAACATAGTGA+AGG | 0.600552 | 8_2:+22501589 | None:intergenic |
| GGCGATCCCAAATAAGACCA+TGG | 0.600972 | 8_2:+22500245 | None:intergenic |
| AGTGTTAGTTCTAGGGAACT+CGG | 0.601888 | 8_2:-22500308 | Msa1240140:CDS |
| CAAGTATTCTGACCCAGCAA+TGG | 0.604078 | 8_2:-22500567 | Msa1240140:CDS |
| TAGGTGAGGATTCCTTCAGT+AGG | 0.610956 | 8_2:+22500102 | None:intergenic |
| AGACCGACTAGAACTAGGAC+CGG | 0.611965 | 8_2:+22500649 | None:intergenic |
| GTCCATCGCATTAAAAGCAG+AGG | 0.612380 | 8_2:+22500916 | None:intergenic |
| TGCGAAGATTCTTATATCTG+CGG | 0.614268 | 8_2:-22501544 | Msa1240140:CDS |
| GCGATCCCAAATAAGACCAT+GGG | 0.615642 | 8_2:+22500246 | None:intergenic |
| ATGGGTCCAAGTCCTACTGA+AGG | 0.618676 | 8_2:-22500114 | Msa1240140:CDS |
| ACCAGAAGCAACATAGTGAA+GGG | 0.629252 | 8_2:+22501590 | None:intergenic |
| GAGGCAGATGAACATGGTGA+AGG | 0.635941 | 8_2:+22500935 | None:intergenic |
| AGTCGTGTTCGATACTGATG+TGG | 0.638739 | 8_2:+22501055 | None:intergenic |
| TGCTGCTGTTTCCCGCGATG+AGG | 0.639578 | 8_2:+22500341 | None:intergenic |
| ACCAACAGATCTATTATCAG+AGG | 0.639774 | 8_2:+22501407 | None:intergenic |
| AAGCCGGTCCTAGTTCTAGT+CGG | 0.644175 | 8_2:-22500652 | Msa1240140:CDS |
| TTGGATCACCTACAGACCCA+TGG | 0.648746 | 8_2:-22500262 | Msa1240140:CDS |
| AAAGCAGAGGCAGATGAACA+TGG | 0.655402 | 8_2:+22500929 | None:intergenic |
| ATGTATGCATTTCCTCATCG+CGG | 0.661457 | 8_2:-22500353 | Msa1240140:CDS |
| GTGATCCAACAACTGAGGAA+GGG | 0.664346 | 8_2:+22500276 | None:intergenic |
| ACTTGGACCCATGATAGATG+AGG | 0.665852 | 8_2:+22500125 | None:intergenic |
| AGGAGCTTCTTCAATTAACG+AGG | 0.677801 | 8_2:-22501778 | Msa1240140:CDS |
| CACACGATGAAAAGGAATCG+AGG | 0.680205 | 8_2:-22500988 | Msa1240140:CDS |
| GTCGTGTTCGATACTGATGT+GGG | 0.690047 | 8_2:+22501056 | None:intergenic |
| ATACATTTGAGGGCTCATTG+AGG | 0.695981 | 8_2:+22500370 | None:intergenic |
| GGATCCACTACAAGAGAAGG+CGG | 0.703662 | 8_2:+22501297 | None:intergenic |
| TGTAGGTGATCCAACAACTG+AGG | 0.709385 | 8_2:+22500271 | None:intergenic |
| ACACCAGATCTAGTTAACGA+AGG | 0.718756 | 8_2:+22500959 | None:intergenic |
| ATTTGAACATAAAATAAACG+AGG | 0.729185 | 8_2:-22500156 | Msa1240140:CDS |
| GAACACGACTCTGTAAAGAG+GGG | 0.748627 | 8_2:-22501042 | Msa1240140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATAAAAGGGTATTTTTTT+TGG | - | chr8_2:22500893-22500912 | Msa1240140:CDS | 20.0% |
| !!! | GTTTATTTTATGTTCAAATG+AGG | + | chr8_2:22501747-22501766 | None:intergenic | 20.0% |
| !! | ATTTGAACATAAAATAAACG+AGG | - | chr8_2:22501748-22501767 | Msa1240140:CDS | 20.0% |
| !!! | TGATAAAAGGGTATTTTTTT+TGG | - | chr8_2:22500893-22500912 | Msa1240140:CDS | 20.0% |
| !!! | GTTTATTTTATGTTCAAATG+AGG | + | chr8_2:22501747-22501766 | None:intergenic | 20.0% |
| !! | ATTTGAACATAAAATAAACG+AGG | - | chr8_2:22501748-22501767 | Msa1240140:CDS | 20.0% |
| !! | AAGCTTCTTTTAAACAAAGA+AGG | - | chr8_2:22500106-22500125 | Msa1240140:CDS | 25.0% |
| ! | TGTTTCTTCTCAGTAAATTT+CGG | + | chr8_2:22500631-22500650 | None:intergenic | 25.0% |
| !!! | ATACAAGTTGTTTTTATACC+AGG | + | chr8_2:22500676-22500695 | None:intergenic | 25.0% |
| !! | GAATCAATTTTCAATCTAGT+CGG | - | chr8_2:22501146-22501165 | Msa1240140:intron | 25.0% |
| !! | AAGCTTCTTTTAAACAAAGA+AGG | - | chr8_2:22500106-22500125 | Msa1240140:CDS | 25.0% |
| ! | TGTTTCTTCTCAGTAAATTT+CGG | + | chr8_2:22500631-22500650 | None:intergenic | 25.0% |
| !!! | ATACAAGTTGTTTTTATACC+AGG | + | chr8_2:22500676-22500695 | None:intergenic | 25.0% |
| !! | GAATCAATTTTCAATCTAGT+CGG | - | chr8_2:22501146-22501165 | Msa1240140:intron | 25.0% |
| !! | TGGTAGTATTGATGTTATGA+AGG | - | chr8_2:22500231-22500250 | Msa1240140:CDS | 30.0% |
| !!! | TCTGTTGATTCTTTTAGTTC+TGG | - | chr8_2:22500538-22500557 | Msa1240140:CDS | 30.0% |
| !!! | AGTTCTGGTTTTCTTGAAAA+TGG | - | chr8_2:22500553-22500572 | Msa1240140:CDS | 30.0% |
| !!! | GTTCTGGTTTTCTTGAAAAT+GGG | - | chr8_2:22500554-22500573 | Msa1240140:CDS | 30.0% |
| ! | GTTTTTATACCAGGAAATGA+TGG | + | chr8_2:22500667-22500686 | None:intergenic | 30.0% |
| GGAAAAATTAGGTTTATGCA+CGG | + | chr8_2:22501063-22501082 | None:intergenic | 30.0% | |
| ! | AATTTTCAATCTAGTCGGTT+GGG | - | chr8_2:22501151-22501170 | Msa1240140:intron | 30.0% |
| AAGAGATCTTCAAGATTTGA+TGG | + | chr8_2:22501293-22501312 | None:intergenic | 30.0% | |
| CACTTCTCTTTAATCATCTT+AGG | + | chr8_2:22501824-22501843 | None:intergenic | 30.0% | |
| !! | TGGTAGTATTGATGTTATGA+AGG | - | chr8_2:22500231-22500250 | Msa1240140:CDS | 30.0% |
| !!! | TCTGTTGATTCTTTTAGTTC+TGG | - | chr8_2:22500538-22500557 | Msa1240140:CDS | 30.0% |
| !!! | AGTTCTGGTTTTCTTGAAAA+TGG | - | chr8_2:22500553-22500572 | Msa1240140:CDS | 30.0% |
| !!! | GTTCTGGTTTTCTTGAAAAT+GGG | - | chr8_2:22500554-22500573 | Msa1240140:CDS | 30.0% |
| ! | GTTTTTATACCAGGAAATGA+TGG | + | chr8_2:22500667-22500686 | None:intergenic | 30.0% |
| GGAAAAATTAGGTTTATGCA+CGG | + | chr8_2:22501063-22501082 | None:intergenic | 30.0% | |
| ! | AATTTTCAATCTAGTCGGTT+GGG | - | chr8_2:22501151-22501170 | Msa1240140:intron | 30.0% |
| AAGAGATCTTCAAGATTTGA+TGG | + | chr8_2:22501293-22501312 | None:intergenic | 30.0% | |
| CACTTCTCTTTAATCATCTT+AGG | + | chr8_2:22501824-22501843 | None:intergenic | 30.0% | |
| ! | GTTGATGTGAATTTTGCTTG+CGG | - | chr8_2:22500274-22500293 | Msa1240140:CDS | 35.0% |
| ! | TTGATGTGAATTTTGCTTGC+GGG | - | chr8_2:22500275-22500294 | Msa1240140:CDS | 35.0% |
| TGCGAAGATTCTTATATCTG+CGG | - | chr8_2:22500360-22500379 | Msa1240140:CDS | 35.0% | |
| ! | AGTTCTCGAGAAACTTCTTT+TGG | - | chr8_2:22500468-22500487 | Msa1240140:CDS | 35.0% |
| ACCAACAGATCTATTATCAG+AGG | + | chr8_2:22500500-22500519 | None:intergenic | 35.0% | |
| !! | TGTTGGTGACTTCTCTATTT+CGG | - | chr8_2:22500513-22500532 | Msa1240140:CDS | 35.0% |
| GATAAGTGTGAATATGCTCA+TGG | - | chr8_2:22500804-22500823 | Msa1240140:intron | 35.0% | |
| !!! | TTTTTTGGCACACGATGAAA+AGG | - | chr8_2:22500908-22500927 | Msa1240140:CDS | 35.0% |
| AGAAGAGACTGGGAAAAATT+AGG | + | chr8_2:22501074-22501093 | None:intergenic | 35.0% | |
| ! | TAATTTTTCCCAGTCTCTTC+TGG | - | chr8_2:22501073-22501092 | Msa1240140:CDS | 35.0% |
| ! | CAATTTTCAATCTAGTCGGT+TGG | - | chr8_2:22501150-22501169 | Msa1240140:intron | 35.0% |
| ATGTGCTGAGCTATTTAGAT+TGG | - | chr8_2:22501192-22501211 | Msa1240140:intron | 35.0% | |
| ! | TCTTGAAGATCTCTTTTGTG+CGG | - | chr8_2:22501298-22501317 | Msa1240140:CDS | 35.0% |
| AAAAAACAGAAGCCATTGCT+GGG | + | chr8_2:22501352-22501371 | None:intergenic | 35.0% | |
| GACGGCATATTAGTATTTGA+AGG | + | chr8_2:22501425-22501444 | None:intergenic | 35.0% | |
| GAGGAAATGCATACATTTGA+GGG | + | chr8_2:22501547-22501566 | None:intergenic | 35.0% | |
| TGAGGAAATGCATACATTTG+AGG | + | chr8_2:22501548-22501567 | None:intergenic | 35.0% | |
| !! | AACTGAAGAGTGTTAGTTCT+AGG | - | chr8_2:22501588-22501607 | Msa1240140:CDS | 35.0% |
| !! | ACTGAAGAGTGTTAGTTCTA+GGG | - | chr8_2:22501589-22501608 | Msa1240140:CDS | 35.0% |
| GACCAATCAAACATCTCATT+AGG | + | chr8_2:22501683-22501702 | None:intergenic | 35.0% | |
| ! | ATGTTTGATTGGTCCGTAAA+TGG | - | chr8_2:22501689-22501708 | Msa1240140:CDS | 35.0% |
| ACTTAGTTCGTCTCCATTTA+CGG | + | chr8_2:22501705-22501724 | None:intergenic | 35.0% | |
| ATGAGGATGTATTCTGCATT+TGG | + | chr8_2:22501730-22501749 | None:intergenic | 35.0% | |
| CTCTTTAATCATCTTAGGTG+AGG | + | chr8_2:22501819-22501838 | None:intergenic | 35.0% | |
| ATCTAGCAGAAGATGTGATA+GGG | + | chr8_2:22501859-22501878 | None:intergenic | 35.0% | |
| AATCTAGCAGAAGATGTGAT+AGG | + | chr8_2:22501860-22501879 | None:intergenic | 35.0% | |
| ! | GTTGATGTGAATTTTGCTTG+CGG | - | chr8_2:22500274-22500293 | Msa1240140:CDS | 35.0% |
| ! | TTGATGTGAATTTTGCTTGC+GGG | - | chr8_2:22500275-22500294 | Msa1240140:CDS | 35.0% |
| TGCGAAGATTCTTATATCTG+CGG | - | chr8_2:22500360-22500379 | Msa1240140:CDS | 35.0% | |
| ! | AGTTCTCGAGAAACTTCTTT+TGG | - | chr8_2:22500468-22500487 | Msa1240140:CDS | 35.0% |
| ACCAACAGATCTATTATCAG+AGG | + | chr8_2:22500500-22500519 | None:intergenic | 35.0% | |
| !! | TGTTGGTGACTTCTCTATTT+CGG | - | chr8_2:22500513-22500532 | Msa1240140:CDS | 35.0% |
| GATAAGTGTGAATATGCTCA+TGG | - | chr8_2:22500804-22500823 | Msa1240140:intron | 35.0% | |
| !!! | TTTTTTGGCACACGATGAAA+AGG | - | chr8_2:22500908-22500927 | Msa1240140:CDS | 35.0% |
| AGAAGAGACTGGGAAAAATT+AGG | + | chr8_2:22501074-22501093 | None:intergenic | 35.0% | |
| ! | TAATTTTTCCCAGTCTCTTC+TGG | - | chr8_2:22501073-22501092 | Msa1240140:CDS | 35.0% |
| ! | CAATTTTCAATCTAGTCGGT+TGG | - | chr8_2:22501150-22501169 | Msa1240140:intron | 35.0% |
| ATGTGCTGAGCTATTTAGAT+TGG | - | chr8_2:22501192-22501211 | Msa1240140:intron | 35.0% | |
| ! | TCTTGAAGATCTCTTTTGTG+CGG | - | chr8_2:22501298-22501317 | Msa1240140:CDS | 35.0% |
| AAAAAACAGAAGCCATTGCT+GGG | + | chr8_2:22501352-22501371 | None:intergenic | 35.0% | |
| GACGGCATATTAGTATTTGA+AGG | + | chr8_2:22501425-22501444 | None:intergenic | 35.0% | |
| GAGGAAATGCATACATTTGA+GGG | + | chr8_2:22501547-22501566 | None:intergenic | 35.0% | |
| TGAGGAAATGCATACATTTG+AGG | + | chr8_2:22501548-22501567 | None:intergenic | 35.0% | |
| !! | AACTGAAGAGTGTTAGTTCT+AGG | - | chr8_2:22501588-22501607 | Msa1240140:CDS | 35.0% |
| !! | ACTGAAGAGTGTTAGTTCTA+GGG | - | chr8_2:22501589-22501608 | Msa1240140:CDS | 35.0% |
| GACCAATCAAACATCTCATT+AGG | + | chr8_2:22501683-22501702 | None:intergenic | 35.0% | |
| ! | ATGTTTGATTGGTCCGTAAA+TGG | - | chr8_2:22501689-22501708 | Msa1240140:CDS | 35.0% |
| ACTTAGTTCGTCTCCATTTA+CGG | + | chr8_2:22501705-22501724 | None:intergenic | 35.0% | |
| ATGAGGATGTATTCTGCATT+TGG | + | chr8_2:22501730-22501749 | None:intergenic | 35.0% | |
| CTCTTTAATCATCTTAGGTG+AGG | + | chr8_2:22501819-22501838 | None:intergenic | 35.0% | |
| ATCTAGCAGAAGATGTGATA+GGG | + | chr8_2:22501859-22501878 | None:intergenic | 35.0% | |
| AATCTAGCAGAAGATGTGAT+AGG | + | chr8_2:22501860-22501879 | None:intergenic | 35.0% | |
| GAAGCAAGTACTAGTAAGCT+GGG | + | chr8_2:22500064-22500083 | None:intergenic | 40.0% | |
| AGGAGCTTCTTCAATTAACG+AGG | - | chr8_2:22500126-22500145 | Msa1240140:CDS | 40.0% | |
| AGCTTCTTCAATTAACGAGG+TGG | - | chr8_2:22500129-22500148 | Msa1240140:CDS | 40.0% | |
| GCTTCTTCAATTAACGAGGT+GGG | - | chr8_2:22500130-22500149 | Msa1240140:CDS | 40.0% | |
| CTTCTTCAATTAACGAGGTG+GGG | - | chr8_2:22500131-22500150 | Msa1240140:CDS | 40.0% | |
| ATTTGGTACGGTCGACAAAA+TGG | - | chr8_2:22500154-22500173 | Msa1240140:CDS | 40.0% | |
| TGAGCACAAAACTCCTTTGA+TGG | - | chr8_2:22500195-22500214 | Msa1240140:CDS | 40.0% | |
| TAAGTAGCAGCAACCATCAA+AGG | + | chr8_2:22500211-22500230 | None:intergenic | 40.0% | |
| ! | TTGATGGTTGCTGCTACTTA+TGG | - | chr8_2:22500211-22500230 | Msa1240140:CDS | 40.0% |
| ! | TGATGTGAATTTTGCTTGCG+GGG | - | chr8_2:22500276-22500295 | Msa1240140:CDS | 40.0% |
| ACCAGAAGCAACATAGTGAA+GGG | + | chr8_2:22500317-22500336 | None:intergenic | 40.0% | |
| ! | TTCACTATGTTGCTTCTGGT+GGG | - | chr8_2:22500317-22500336 | Msa1240140:CDS | 40.0% |
| GCGAAGATTCTTATATCTGC+GGG | - | chr8_2:22500361-22500380 | Msa1240140:CDS | 40.0% | |
| ! | GTTAGTTGTGTCGATAGCAA+TGG | - | chr8_2:22500391-22500410 | Msa1240140:CDS | 40.0% |
| GTTGTTCCTCCTAATATGCA+AGG | - | chr8_2:22500436-22500455 | Msa1240140:CDS | 40.0% | |
| TTCAAGCCTTGCATATTAGG+AGG | + | chr8_2:22500445-22500464 | None:intergenic | 40.0% | |
| CCTTTCAAGCCTTGCATATT+AGG | + | chr8_2:22500448-22500467 | None:intergenic | 40.0% | |
| CCTAATATGCAAGGCTTGAA+AGG | - | chr8_2:22500445-22500464 | Msa1240140:CDS | 40.0% | |
| GCCTCTGATAATAGATCTGT+TGG | - | chr8_2:22500496-22500515 | Msa1240140:CDS | 40.0% | |
| ! | AACTATAATGGAACCTCCCA+AGG | + | chr8_2:22500740-22500759 | None:intergenic | 40.0% |
| CTTGCCCTGAATTTAGGAAA+GGG | - | chr8_2:22500766-22500785 | Msa1240140:intron | 40.0% | |
| TTGCCCTGAATTTAGGAAAG+GGG | - | chr8_2:22500767-22500786 | Msa1240140:intron | 40.0% | |
| AAGCCCCTTTCCTAAATTCA+GGG | + | chr8_2:22500773-22500792 | None:intergenic | 40.0% | |
| AATTTAGGAAAGGGGCTTGT+AGG | - | chr8_2:22500775-22500794 | Msa1240140:intron | 40.0% | |
| CTCATGGAATATTCAAGTGC+TGG | - | chr8_2:22500820-22500839 | Msa1240140:intron | 40.0% | |
| !! | AGGGGACTAGTTGTGATAAA+AGG | - | chr8_2:22500880-22500899 | Msa1240140:intron | 40.0% |
| !! | GGGGACTAGTTGTGATAAAA+GGG | - | chr8_2:22500881-22500900 | Msa1240140:intron | 40.0% |
| ACACCAGATCTAGTTAACGA+AGG | + | chr8_2:22500948-22500967 | None:intergenic | 40.0% | |
| ! | TGCTGCTGCAATGAATCTTT+TGG | - | chr8_2:22501013-22501032 | Msa1240140:CDS | 40.0% |
| ! | GCTGCAATGAATCTTTTGGT+TGG | - | chr8_2:22501017-22501036 | Msa1240140:CDS | 40.0% |
| CGAGCACATCAAAATGTTCT+AGG | - | chr8_2:22501124-22501143 | Msa1240140:CDS | 40.0% | |
| ATAGCTCAGCACATTGAAGT+TGG | + | chr8_2:22501186-22501205 | None:intergenic | 40.0% | |
| AACAGCTCAAGTCACTCATA+AGG | + | chr8_2:22501226-22501245 | None:intergenic | 40.0% | |
| !! | TTGAGCTGTTTCTCAAAAGC+CGG | - | chr8_2:22501236-22501255 | Msa1240140:intron | 40.0% |
| GAAAAAACAGAAGCCATTGC+TGG | + | chr8_2:22501353-22501372 | None:intergenic | 40.0% | |
| ! | TGCTCAACTTTCTTTGGAGA+CGG | + | chr8_2:22501443-22501462 | None:intergenic | 40.0% |
| AGACGATGCTCAACTTTCTT+TGG | + | chr8_2:22501449-22501468 | None:intergenic | 40.0% | |
| ! | TCAATTGGTGTCCCTTCATT+CGG | - | chr8_2:22501479-22501498 | Msa1240140:CDS | 40.0% |
| ! | GAGATTGGTTCAAGACTTCT+AGG | + | chr8_2:22501515-22501534 | None:intergenic | 40.0% |
| ATACATTTGAGGGCTCATTG+AGG | + | chr8_2:22501537-22501556 | None:intergenic | 40.0% | |
| ATGTATGCATTTCCTCATCG+CGG | - | chr8_2:22501551-22501570 | Msa1240140:CDS | 40.0% | |
| !! | AGTGTTAGTTCTAGGGAACT+CGG | - | chr8_2:22501596-22501615 | Msa1240140:CDS | 40.0% |
| ! | AACAACTGAGGAAGGGATTT+TGG | + | chr8_2:22501624-22501643 | None:intergenic | 40.0% |
| AAAATCCCTTCCTCAGTTGT+TGG | - | chr8_2:22501623-22501642 | Msa1240140:CDS | 40.0% | |
| AAATAAGACCATGGGTCTGT+AGG | + | chr8_2:22501653-22501672 | None:intergenic | 40.0% | |
| !! | TACAGACCCATGGTCTTATT+TGG | - | chr8_2:22501652-22501671 | Msa1240140:CDS | 40.0% |
| !! | ACAGACCCATGGTCTTATTT+GGG | - | chr8_2:22501653-22501672 | Msa1240140:CDS | 40.0% |
| CGCCTAATGAGATGTTTGAT+TGG | - | chr8_2:22501678-22501697 | Msa1240140:CDS | 40.0% | |
| GAAGCAAGTACTAGTAAGCT+GGG | + | chr8_2:22500064-22500083 | None:intergenic | 40.0% | |
| AGGAGCTTCTTCAATTAACG+AGG | - | chr8_2:22500126-22500145 | Msa1240140:CDS | 40.0% | |
| AGCTTCTTCAATTAACGAGG+TGG | - | chr8_2:22500129-22500148 | Msa1240140:CDS | 40.0% | |
| GCTTCTTCAATTAACGAGGT+GGG | - | chr8_2:22500130-22500149 | Msa1240140:CDS | 40.0% | |
| CTTCTTCAATTAACGAGGTG+GGG | - | chr8_2:22500131-22500150 | Msa1240140:CDS | 40.0% | |
| ATTTGGTACGGTCGACAAAA+TGG | - | chr8_2:22500154-22500173 | Msa1240140:CDS | 40.0% | |
| TGAGCACAAAACTCCTTTGA+TGG | - | chr8_2:22500195-22500214 | Msa1240140:CDS | 40.0% | |
| TAAGTAGCAGCAACCATCAA+AGG | + | chr8_2:22500211-22500230 | None:intergenic | 40.0% | |
| ! | TTGATGGTTGCTGCTACTTA+TGG | - | chr8_2:22500211-22500230 | Msa1240140:CDS | 40.0% |
| ! | TGATGTGAATTTTGCTTGCG+GGG | - | chr8_2:22500276-22500295 | Msa1240140:CDS | 40.0% |
| ACCAGAAGCAACATAGTGAA+GGG | + | chr8_2:22500317-22500336 | None:intergenic | 40.0% | |
| ! | TTCACTATGTTGCTTCTGGT+GGG | - | chr8_2:22500317-22500336 | Msa1240140:CDS | 40.0% |
| GCGAAGATTCTTATATCTGC+GGG | - | chr8_2:22500361-22500380 | Msa1240140:CDS | 40.0% | |
| ! | GTTAGTTGTGTCGATAGCAA+TGG | - | chr8_2:22500391-22500410 | Msa1240140:CDS | 40.0% |
| GTTGTTCCTCCTAATATGCA+AGG | - | chr8_2:22500436-22500455 | Msa1240140:CDS | 40.0% | |
| TTCAAGCCTTGCATATTAGG+AGG | + | chr8_2:22500445-22500464 | None:intergenic | 40.0% | |
| CCTTTCAAGCCTTGCATATT+AGG | + | chr8_2:22500448-22500467 | None:intergenic | 40.0% | |
| CCTAATATGCAAGGCTTGAA+AGG | - | chr8_2:22500445-22500464 | Msa1240140:CDS | 40.0% | |
| GCCTCTGATAATAGATCTGT+TGG | - | chr8_2:22500496-22500515 | Msa1240140:CDS | 40.0% | |
| ! | AACTATAATGGAACCTCCCA+AGG | + | chr8_2:22500740-22500759 | None:intergenic | 40.0% |
| CTTGCCCTGAATTTAGGAAA+GGG | - | chr8_2:22500766-22500785 | Msa1240140:intron | 40.0% | |
| TTGCCCTGAATTTAGGAAAG+GGG | - | chr8_2:22500767-22500786 | Msa1240140:intron | 40.0% | |
| AAGCCCCTTTCCTAAATTCA+GGG | + | chr8_2:22500773-22500792 | None:intergenic | 40.0% | |
| AATTTAGGAAAGGGGCTTGT+AGG | - | chr8_2:22500775-22500794 | Msa1240140:intron | 40.0% | |
| CTCATGGAATATTCAAGTGC+TGG | - | chr8_2:22500820-22500839 | Msa1240140:intron | 40.0% | |
| !! | AGGGGACTAGTTGTGATAAA+AGG | - | chr8_2:22500880-22500899 | Msa1240140:intron | 40.0% |
| !! | GGGGACTAGTTGTGATAAAA+GGG | - | chr8_2:22500881-22500900 | Msa1240140:intron | 40.0% |
| ACACCAGATCTAGTTAACGA+AGG | + | chr8_2:22500948-22500967 | None:intergenic | 40.0% | |
| ! | TGCTGCTGCAATGAATCTTT+TGG | - | chr8_2:22501013-22501032 | Msa1240140:CDS | 40.0% |
| ! | GCTGCAATGAATCTTTTGGT+TGG | - | chr8_2:22501017-22501036 | Msa1240140:CDS | 40.0% |
| CGAGCACATCAAAATGTTCT+AGG | - | chr8_2:22501124-22501143 | Msa1240140:CDS | 40.0% | |
| ATAGCTCAGCACATTGAAGT+TGG | + | chr8_2:22501186-22501205 | None:intergenic | 40.0% | |
| AACAGCTCAAGTCACTCATA+AGG | + | chr8_2:22501226-22501245 | None:intergenic | 40.0% | |
| !! | TTGAGCTGTTTCTCAAAAGC+CGG | - | chr8_2:22501236-22501255 | Msa1240140:intron | 40.0% |
| GAAAAAACAGAAGCCATTGC+TGG | + | chr8_2:22501353-22501372 | None:intergenic | 40.0% | |
| ! | TGCTCAACTTTCTTTGGAGA+CGG | + | chr8_2:22501443-22501462 | None:intergenic | 40.0% |
| AGACGATGCTCAACTTTCTT+TGG | + | chr8_2:22501449-22501468 | None:intergenic | 40.0% | |
| ! | TCAATTGGTGTCCCTTCATT+CGG | - | chr8_2:22501479-22501498 | Msa1240140:CDS | 40.0% |
| ! | GAGATTGGTTCAAGACTTCT+AGG | + | chr8_2:22501515-22501534 | None:intergenic | 40.0% |
| ATACATTTGAGGGCTCATTG+AGG | + | chr8_2:22501537-22501556 | None:intergenic | 40.0% | |
| ATGTATGCATTTCCTCATCG+CGG | - | chr8_2:22501551-22501570 | Msa1240140:CDS | 40.0% | |
| !! | AGTGTTAGTTCTAGGGAACT+CGG | - | chr8_2:22501596-22501615 | Msa1240140:CDS | 40.0% |
| ! | AACAACTGAGGAAGGGATTT+TGG | + | chr8_2:22501624-22501643 | None:intergenic | 40.0% |
| AAAATCCCTTCCTCAGTTGT+TGG | - | chr8_2:22501623-22501642 | Msa1240140:CDS | 40.0% | |
| AAATAAGACCATGGGTCTGT+AGG | + | chr8_2:22501653-22501672 | None:intergenic | 40.0% | |
| !! | TACAGACCCATGGTCTTATT+TGG | - | chr8_2:22501652-22501671 | Msa1240140:CDS | 40.0% |
| !! | ACAGACCCATGGTCTTATTT+GGG | - | chr8_2:22501653-22501672 | Msa1240140:CDS | 40.0% |
| CGCCTAATGAGATGTTTGAT+TGG | - | chr8_2:22501678-22501697 | Msa1240140:CDS | 40.0% | |
| CGAAGCAAGTACTAGTAAGC+TGG | + | chr8_2:22500065-22500084 | None:intergenic | 45.0% | |
| GCTTCGTACAATGACTCTGA+AGG | - | chr8_2:22500079-22500098 | Msa1240140:CDS | 45.0% | |
| CAATTAACGAGGTGGGGATT+TGG | - | chr8_2:22500137-22500156 | Msa1240140:CDS | 45.0% | |
| CACCAGAAGCAACATAGTGA+AGG | + | chr8_2:22500318-22500337 | None:intergenic | 45.0% | |
| ! | CTTCACTATGTTGCTTCTGG+TGG | - | chr8_2:22500316-22500335 | Msa1240140:CDS | 45.0% |
| GGAACAACGATGACATCAAC+AGG | + | chr8_2:22500424-22500443 | None:intergenic | 45.0% | |
| TTCGGATCCACTACAAGAGA+AGG | + | chr8_2:22500613-22500632 | None:intergenic | 45.0% | |
| !! | CCAGGAAATGATGGATCTAC+TGG | + | chr8_2:22500658-22500677 | None:intergenic | 45.0% |
| CCAGTAGATCCATCATTTCC+TGG | - | chr8_2:22500655-22500674 | Msa1240140:CDS | 45.0% | |
| CCTTTCCTAAATTCAGGGCA+AGG | + | chr8_2:22500768-22500787 | None:intergenic | 45.0% | |
| CCTTGCCCTGAATTTAGGAA+AGG | - | chr8_2:22500765-22500784 | Msa1240140:intron | 45.0% | |
| CAAGCCCCTTTCCTAAATTC+AGG | + | chr8_2:22500774-22500793 | None:intergenic | 45.0% | |
| GTCGTGTTCGATACTGATGT+GGG | + | chr8_2:22500851-22500870 | None:intergenic | 45.0% | |
| AGTCGTGTTCGATACTGATG+TGG | + | chr8_2:22500852-22500871 | None:intergenic | 45.0% | |
| TCGAACACGACTCTGTAAAG+AGG | - | chr8_2:22500860-22500879 | Msa1240140:intron | 45.0% | |
| CGAACACGACTCTGTAAAGA+GGG | - | chr8_2:22500861-22500880 | Msa1240140:intron | 45.0% | |
| GAACACGACTCTGTAAAGAG+GGG | - | chr8_2:22500862-22500881 | Msa1240140:intron | 45.0% | |
| CACACGATGAAAAGGAATCG+AGG | - | chr8_2:22500916-22500935 | Msa1240140:CDS | 45.0% | |
| CTGCCTTCGTTAACTAGATC+TGG | - | chr8_2:22500942-22500961 | Msa1240140:CDS | 45.0% | |
| AAAGCAGAGGCAGATGAACA+TGG | + | chr8_2:22500978-22500997 | None:intergenic | 45.0% | |
| !! | TGCCTCTGCTTTTAATGCGA+TGG | - | chr8_2:22500986-22501005 | Msa1240140:CDS | 45.0% |
| GTCCATCGCATTAAAAGCAG+AGG | + | chr8_2:22500991-22501010 | None:intergenic | 45.0% | |
| TTATGCACGGAAGAGACTGA+CGG | + | chr8_2:22501050-22501069 | None:intergenic | 45.0% | |
| ! | TTCCCAGTCTCTTCTGGAAA+TGG | - | chr8_2:22501079-22501098 | Msa1240140:CDS | 45.0% |
| ! | TGCCATTTCCAGAAGAGACT+GGG | + | chr8_2:22501084-22501103 | None:intergenic | 45.0% |
| ! | ATGCCATTTCCAGAAGAGAC+TGG | + | chr8_2:22501085-22501104 | None:intergenic | 45.0% |
| !! | TCCTAGTTCTAGTCGGTCTA+AGG | - | chr8_2:22501259-22501278 | Msa1240140:intron | 45.0% |
| CATTGCTGGGTCAGAATACT+TGG | + | chr8_2:22501339-22501358 | None:intergenic | 45.0% | |
| CAAGTATTCTGACCCAGCAA+TGG | - | chr8_2:22501337-22501356 | Msa1240140:CDS | 45.0% | |
| ! | TAGCAGCTGATTCACGTGAA+GGG | + | chr8_2:22501376-22501395 | None:intergenic | 45.0% |
| ! | ATAGCAGCTGATTCACGTGA+AGG | + | chr8_2:22501377-22501396 | None:intergenic | 45.0% |
| CGTCTGTCACAGTCTTCAAT+TGG | - | chr8_2:22501464-22501483 | Msa1240140:CDS | 45.0% | |
| GTGACATGCTACCGAATGAA+GGG | + | chr8_2:22501493-22501512 | None:intergenic | 45.0% | |
| TGTATGCATTTCCTCATCGC+GGG | - | chr8_2:22501552-22501571 | Msa1240140:CDS | 45.0% | |
| GTGATCCAACAACTGAGGAA+GGG | + | chr8_2:22501631-22501650 | None:intergenic | 45.0% | |
| TGTAGGTGATCCAACAACTG+AGG | + | chr8_2:22501636-22501655 | None:intergenic | 45.0% | |
| GCGATCCCAAATAAGACCAT+GGG | + | chr8_2:22501661-22501680 | None:intergenic | 45.0% | |
| ACGAAGAGCCTCATCTATCA+TGG | - | chr8_2:22501771-22501790 | Msa1240140:CDS | 45.0% | |
| CGAAGAGCCTCATCTATCAT+GGG | - | chr8_2:22501772-22501791 | Msa1240140:CDS | 45.0% | |
| ACTTGGACCCATGATAGATG+AGG | + | chr8_2:22501782-22501801 | None:intergenic | 45.0% | |
| AGGATTCCTTCAGTAGGACT+TGG | + | chr8_2:22501799-22501818 | None:intergenic | 45.0% | |
| TAGGTGAGGATTCCTTCAGT+AGG | + | chr8_2:22501805-22501824 | None:intergenic | 45.0% | |
| CGAAGCAAGTACTAGTAAGC+TGG | + | chr8_2:22500065-22500084 | None:intergenic | 45.0% | |
| GCTTCGTACAATGACTCTGA+AGG | - | chr8_2:22500079-22500098 | Msa1240140:CDS | 45.0% | |
| CAATTAACGAGGTGGGGATT+TGG | - | chr8_2:22500137-22500156 | Msa1240140:CDS | 45.0% | |
| CACCAGAAGCAACATAGTGA+AGG | + | chr8_2:22500318-22500337 | None:intergenic | 45.0% | |
| ! | CTTCACTATGTTGCTTCTGG+TGG | - | chr8_2:22500316-22500335 | Msa1240140:CDS | 45.0% |
| GGAACAACGATGACATCAAC+AGG | + | chr8_2:22500424-22500443 | None:intergenic | 45.0% | |
| TTCGGATCCACTACAAGAGA+AGG | + | chr8_2:22500613-22500632 | None:intergenic | 45.0% | |
| !! | CCAGGAAATGATGGATCTAC+TGG | + | chr8_2:22500658-22500677 | None:intergenic | 45.0% |
| CCAGTAGATCCATCATTTCC+TGG | - | chr8_2:22500655-22500674 | Msa1240140:CDS | 45.0% | |
| CCTTTCCTAAATTCAGGGCA+AGG | + | chr8_2:22500768-22500787 | None:intergenic | 45.0% | |
| CCTTGCCCTGAATTTAGGAA+AGG | - | chr8_2:22500765-22500784 | Msa1240140:intron | 45.0% | |
| CAAGCCCCTTTCCTAAATTC+AGG | + | chr8_2:22500774-22500793 | None:intergenic | 45.0% | |
| GTCGTGTTCGATACTGATGT+GGG | + | chr8_2:22500851-22500870 | None:intergenic | 45.0% | |
| AGTCGTGTTCGATACTGATG+TGG | + | chr8_2:22500852-22500871 | None:intergenic | 45.0% | |
| TCGAACACGACTCTGTAAAG+AGG | - | chr8_2:22500860-22500879 | Msa1240140:intron | 45.0% | |
| CGAACACGACTCTGTAAAGA+GGG | - | chr8_2:22500861-22500880 | Msa1240140:intron | 45.0% | |
| GAACACGACTCTGTAAAGAG+GGG | - | chr8_2:22500862-22500881 | Msa1240140:intron | 45.0% | |
| CACACGATGAAAAGGAATCG+AGG | - | chr8_2:22500916-22500935 | Msa1240140:CDS | 45.0% | |
| CTGCCTTCGTTAACTAGATC+TGG | - | chr8_2:22500942-22500961 | Msa1240140:CDS | 45.0% | |
| AAAGCAGAGGCAGATGAACA+TGG | + | chr8_2:22500978-22500997 | None:intergenic | 45.0% | |
| !! | TGCCTCTGCTTTTAATGCGA+TGG | - | chr8_2:22500986-22501005 | Msa1240140:CDS | 45.0% |
| GTCCATCGCATTAAAAGCAG+AGG | + | chr8_2:22500991-22501010 | None:intergenic | 45.0% | |
| TTATGCACGGAAGAGACTGA+CGG | + | chr8_2:22501050-22501069 | None:intergenic | 45.0% | |
| ! | TTCCCAGTCTCTTCTGGAAA+TGG | - | chr8_2:22501079-22501098 | Msa1240140:CDS | 45.0% |
| ! | TGCCATTTCCAGAAGAGACT+GGG | + | chr8_2:22501084-22501103 | None:intergenic | 45.0% |
| ! | ATGCCATTTCCAGAAGAGAC+TGG | + | chr8_2:22501085-22501104 | None:intergenic | 45.0% |
| !! | TCCTAGTTCTAGTCGGTCTA+AGG | - | chr8_2:22501259-22501278 | Msa1240140:intron | 45.0% |
| CATTGCTGGGTCAGAATACT+TGG | + | chr8_2:22501339-22501358 | None:intergenic | 45.0% | |
| CAAGTATTCTGACCCAGCAA+TGG | - | chr8_2:22501337-22501356 | Msa1240140:CDS | 45.0% | |
| ! | TAGCAGCTGATTCACGTGAA+GGG | + | chr8_2:22501376-22501395 | None:intergenic | 45.0% |
| ! | ATAGCAGCTGATTCACGTGA+AGG | + | chr8_2:22501377-22501396 | None:intergenic | 45.0% |
| CGTCTGTCACAGTCTTCAAT+TGG | - | chr8_2:22501464-22501483 | Msa1240140:CDS | 45.0% | |
| GTGACATGCTACCGAATGAA+GGG | + | chr8_2:22501493-22501512 | None:intergenic | 45.0% | |
| TGTATGCATTTCCTCATCGC+GGG | - | chr8_2:22501552-22501571 | Msa1240140:CDS | 45.0% | |
| GTGATCCAACAACTGAGGAA+GGG | + | chr8_2:22501631-22501650 | None:intergenic | 45.0% | |
| TGTAGGTGATCCAACAACTG+AGG | + | chr8_2:22501636-22501655 | None:intergenic | 45.0% | |
| GCGATCCCAAATAAGACCAT+GGG | + | chr8_2:22501661-22501680 | None:intergenic | 45.0% | |
| ACGAAGAGCCTCATCTATCA+TGG | - | chr8_2:22501771-22501790 | Msa1240140:CDS | 45.0% | |
| CGAAGAGCCTCATCTATCAT+GGG | - | chr8_2:22501772-22501791 | Msa1240140:CDS | 45.0% | |
| ACTTGGACCCATGATAGATG+AGG | + | chr8_2:22501782-22501801 | None:intergenic | 45.0% | |
| AGGATTCCTTCAGTAGGACT+TGG | + | chr8_2:22501799-22501818 | None:intergenic | 45.0% | |
| TAGGTGAGGATTCCTTCAGT+AGG | + | chr8_2:22501805-22501824 | None:intergenic | 45.0% | |
| ! | AACGAGGTGGGGATTTGGTA+CGG | - | chr8_2:22500142-22500161 | Msa1240140:CDS | 50.0% |
| ! | GCCCTTCACTATGTTGCTTC+TGG | - | chr8_2:22500313-22500332 | Msa1240140:CDS | 50.0% |
| GGATCCACTACAAGAGAAGG+CGG | + | chr8_2:22500610-22500629 | None:intergenic | 50.0% | |
| TATGCAGCTTGTATGCACCC+AGG | - | chr8_2:22500693-22500712 | Msa1240140:CDS | 50.0% | |
| GGCAAGGCACGCAACTATAA+TGG | + | chr8_2:22500752-22500771 | None:intergenic | 50.0% | |
| GAGGCAGATGAACATGGTGA+AGG | + | chr8_2:22500972-22500991 | None:intergenic | 50.0% | |
| TATGCACGGAAGAGACTGAC+GGG | + | chr8_2:22501049-22501068 | None:intergenic | 50.0% | |
| !! | AAGCCGGTCCTAGTTCTAGT+CGG | - | chr8_2:22501252-22501271 | Msa1240140:intron | 50.0% |
| AGACCGACTAGAACTAGGAC+CGG | + | chr8_2:22501258-22501277 | None:intergenic | 50.0% | |
| GCCTTAGACCGACTAGAACT+AGG | + | chr8_2:22501263-22501282 | None:intergenic | 50.0% | |
| ! | AGCAGCTGATTCACGTGAAG+GGG | + | chr8_2:22501375-22501394 | None:intergenic | 50.0% |
| GGTGACATGCTACCGAATGA+AGG | + | chr8_2:22501494-22501513 | None:intergenic | 50.0% | |
| TGAGGGCTCATTGAGGAGAT+TGG | + | chr8_2:22501530-22501549 | None:intergenic | 50.0% | |
| GGTGATCCAACAACTGAGGA+AGG | + | chr8_2:22501632-22501651 | None:intergenic | 50.0% | |
| TTGGATCACCTACAGACCCA+TGG | - | chr8_2:22501642-22501661 | Msa1240140:CDS | 50.0% | |
| GGCGATCCCAAATAAGACCA+TGG | + | chr8_2:22501662-22501681 | None:intergenic | 50.0% | |
| ATGGGTCCAAGTCCTACTGA+AGG | - | chr8_2:22501790-22501809 | Msa1240140:CDS | 50.0% | |
| ! | AACGAGGTGGGGATTTGGTA+CGG | - | chr8_2:22500142-22500161 | Msa1240140:CDS | 50.0% |
| ! | GCCCTTCACTATGTTGCTTC+TGG | - | chr8_2:22500313-22500332 | Msa1240140:CDS | 50.0% |
| GGATCCACTACAAGAGAAGG+CGG | + | chr8_2:22500610-22500629 | None:intergenic | 50.0% | |
| TATGCAGCTTGTATGCACCC+AGG | - | chr8_2:22500693-22500712 | Msa1240140:CDS | 50.0% | |
| GGCAAGGCACGCAACTATAA+TGG | + | chr8_2:22500752-22500771 | None:intergenic | 50.0% | |
| GAGGCAGATGAACATGGTGA+AGG | + | chr8_2:22500972-22500991 | None:intergenic | 50.0% | |
| TATGCACGGAAGAGACTGAC+GGG | + | chr8_2:22501049-22501068 | None:intergenic | 50.0% | |
| !! | AAGCCGGTCCTAGTTCTAGT+CGG | - | chr8_2:22501252-22501271 | Msa1240140:intron | 50.0% |
| AGACCGACTAGAACTAGGAC+CGG | + | chr8_2:22501258-22501277 | None:intergenic | 50.0% | |
| GCCTTAGACCGACTAGAACT+AGG | + | chr8_2:22501263-22501282 | None:intergenic | 50.0% | |
| ! | AGCAGCTGATTCACGTGAAG+GGG | + | chr8_2:22501375-22501394 | None:intergenic | 50.0% |
| GGTGACATGCTACCGAATGA+AGG | + | chr8_2:22501494-22501513 | None:intergenic | 50.0% | |
| TGAGGGCTCATTGAGGAGAT+TGG | + | chr8_2:22501530-22501549 | None:intergenic | 50.0% | |
| GGTGATCCAACAACTGAGGA+AGG | + | chr8_2:22501632-22501651 | None:intergenic | 50.0% | |
| TTGGATCACCTACAGACCCA+TGG | - | chr8_2:22501642-22501661 | Msa1240140:CDS | 50.0% | |
| GGCGATCCCAAATAAGACCA+TGG | + | chr8_2:22501662-22501681 | None:intergenic | 50.0% | |
| ATGGGTCCAAGTCCTACTGA+AGG | - | chr8_2:22501790-22501809 | Msa1240140:CDS | 50.0% | |
| GGCGACACTGAAGGAGAGTA+TGG | + | chr8_2:22500589-22500608 | None:intergenic | 55.0% | |
| TGCACCCAGGAGAGAATGCT+CGG | - | chr8_2:22500706-22500725 | Msa1240140:CDS | 55.0% | |
| TCCTCCGAGCATTCTCTCCT+GGG | + | chr8_2:22500713-22500732 | None:intergenic | 55.0% | |
| AGGAGAGAATGCTCGGAGGA+GGG | - | chr8_2:22500713-22500732 | Msa1240140:CDS | 55.0% | |
| GCGTGCCTTGCCCTGAATTT+AGG | - | chr8_2:22500760-22500779 | Msa1240140:CDS | 55.0% | |
| AGGAAAGGGGCTTGTAGGCA+TGG | - | chr8_2:22500780-22500799 | Msa1240140:intron | 55.0% | |
| ATGCACGGAAGAGACTGACG+GGG | + | chr8_2:22501048-22501067 | None:intergenic | 55.0% | |
| GGCGACACTGAAGGAGAGTA+TGG | + | chr8_2:22500589-22500608 | None:intergenic | 55.0% | |
| TGCACCCAGGAGAGAATGCT+CGG | - | chr8_2:22500706-22500725 | Msa1240140:CDS | 55.0% | |
| TCCTCCGAGCATTCTCTCCT+GGG | + | chr8_2:22500713-22500732 | None:intergenic | 55.0% | |
| AGGAGAGAATGCTCGGAGGA+GGG | - | chr8_2:22500713-22500732 | Msa1240140:CDS | 55.0% | |
| GCGTGCCTTGCCCTGAATTT+AGG | - | chr8_2:22500760-22500779 | Msa1240140:CDS | 55.0% | |
| AGGAAAGGGGCTTGTAGGCA+TGG | - | chr8_2:22500780-22500799 | Msa1240140:intron | 55.0% | |
| ATGCACGGAAGAGACTGACG+GGG | + | chr8_2:22501048-22501067 | None:intergenic | 55.0% | |
| AGAGAAGGCGGCGACACTGA+AGG | + | chr8_2:22500598-22500617 | None:intergenic | 60.0% | |
| GTCGCCGCCTTCTCTTGTAG+TGG | - | chr8_2:22500603-22500622 | Msa1240140:CDS | 60.0% | |
| ACCCAGGAGAGAATGCTCGG+AGG | - | chr8_2:22500709-22500728 | Msa1240140:CDS | 60.0% | |
| CTCCTCCGAGCATTCTCTCC+TGG | + | chr8_2:22500714-22500733 | None:intergenic | 60.0% | |
| CAGGAGAGAATGCTCGGAGG+AGG | - | chr8_2:22500712-22500731 | Msa1240140:CDS | 60.0% | |
| AATGCTCGGAGGAGGGACCT+TGG | - | chr8_2:22500720-22500739 | Msa1240140:CDS | 60.0% | |
| ATGCTCGGAGGAGGGACCTT+GGG | - | chr8_2:22500721-22500740 | Msa1240140:CDS | 60.0% | |
| TGCACGGAAGAGACTGACGG+GGG | + | chr8_2:22501047-22501066 | None:intergenic | 60.0% | |
| !! | TGCTGCTGTTTCCCGCGATG+AGG | + | chr8_2:22501566-22501585 | None:intergenic | 60.0% |
| AGAGAAGGCGGCGACACTGA+AGG | + | chr8_2:22500598-22500617 | None:intergenic | 60.0% | |
| GTCGCCGCCTTCTCTTGTAG+TGG | - | chr8_2:22500603-22500622 | Msa1240140:CDS | 60.0% | |
| ACCCAGGAGAGAATGCTCGG+AGG | - | chr8_2:22500709-22500728 | Msa1240140:CDS | 60.0% | |
| CTCCTCCGAGCATTCTCTCC+TGG | + | chr8_2:22500714-22500733 | None:intergenic | 60.0% | |
| CAGGAGAGAATGCTCGGAGG+AGG | - | chr8_2:22500712-22500731 | Msa1240140:CDS | 60.0% | |
| AATGCTCGGAGGAGGGACCT+TGG | - | chr8_2:22500720-22500739 | Msa1240140:CDS | 60.0% | |
| ATGCTCGGAGGAGGGACCTT+GGG | - | chr8_2:22500721-22500740 | Msa1240140:CDS | 60.0% | |
| TGCACGGAAGAGACTGACGG+GGG | + | chr8_2:22501047-22501066 | None:intergenic | 60.0% | |
| !! | TGCTGCTGTTTCCCGCGATG+AGG | + | chr8_2:22501566-22501585 | None:intergenic | 60.0% |
| CTCGGAGGAGGGACCTTGGG+AGG | - | chr8_2:22500724-22500743 | Msa1240140:CDS | 70.0% | |
| CTCGGAGGAGGGACCTTGGG+AGG | - | chr8_2:22500724-22500743 | Msa1240140:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 22500025 | 22501901 | 22500025 | ID=Msa1240140;Name=Msa1240140 |
| chr8_2 | mRNA | 22500025 | 22501901 | 22500025 | ID=Msa1240140-mRNA-1;Parent=Msa1240140;Name=Msa1240140-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|3|0|544 |
| chr8_2 | exon | 22501276 | 22501901 | 22501276 | ID=Msa1240140-mRNA-1:exon:7998;Parent=Msa1240140-mRNA-1 |
| chr8_2 | exon | 22500892 | 22501144 | 22500892 | ID=Msa1240140-mRNA-1:exon:7997;Parent=Msa1240140-mRNA-1 |
| chr8_2 | exon | 22500025 | 22500780 | 22500025 | ID=Msa1240140-mRNA-1:exon:7996;Parent=Msa1240140-mRNA-1 |
| chr8_2 | CDS | 22501276 | 22501901 | 22501276 | ID=Msa1240140-mRNA-1:cds;Parent=Msa1240140-mRNA-1 |
| chr8_2 | CDS | 22500892 | 22501144 | 22500892 | ID=Msa1240140-mRNA-1:cds;Parent=Msa1240140-mRNA-1 |
| chr8_2 | CDS | 22500025 | 22500780 | 22500025 | ID=Msa1240140-mRNA-1:cds;Parent=Msa1240140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
