Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240800 | XP_024628229.1 | 95.899 | 317 | 11 | 1 | 1 | 315 | 1 | 317 | 0.0 | 637 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240800 | sp|Q94CK9|LRP1_ARATH | 41.009 | 317 | 163 | 9 | 1 | 312 | 1 | 298 | 2.57e-55 | 186 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240800 | G7LG16 | 94.190 | 327 | 17 | 1 | 1 | 325 | 1 | 327 | 0.0 | 588 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1240800 | TF | SRS |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240800 | MtrunA17_Chr8g0353111 | 94.190 | 327 | 17 | 1 | 1 | 325 | 1 | 327 | 0.0 | 588 |
| Msa1240800 | MtrunA17_Chr3g0082511 | 60.819 | 342 | 102 | 14 | 1 | 324 | 1 | 328 | 9.41e-114 | 332 |
| Msa1240800 | MtrunA17_Chr5g0441921 | 42.963 | 270 | 127 | 7 | 42 | 296 | 34 | 291 | 5.94e-51 | 172 |
| Msa1240800 | MtrunA17_Chr8g0372461 | 40.698 | 172 | 73 | 2 | 109 | 280 | 108 | 250 | 2.91e-34 | 127 |
| Msa1240800 | MtrunA17_Chr5g0404781 | 44.099 | 161 | 83 | 2 | 122 | 282 | 100 | 253 | 8.61e-33 | 124 |
| Msa1240800 | MtrunA17_Chr1g0155791 | 39.752 | 161 | 84 | 1 | 122 | 282 | 122 | 269 | 3.55e-32 | 122 |
| Msa1240800 | MtrunA17_Chr3g0142171 | 38.710 | 186 | 82 | 6 | 122 | 302 | 86 | 244 | 1.05e-29 | 115 |
| Msa1240800 | MtrunA17_Chr4g0035591 | 36.196 | 163 | 66 | 3 | 122 | 284 | 20 | 144 | 9.80e-26 | 102 |
| Msa1240800 | MtrunA17_Chr2g0281741 | 62.857 | 35 | 13 | 0 | 122 | 156 | 150 | 184 | 1.04e-11 | 63.2 |
| Msa1240800 | MtrunA17_Chr0c01g0489181 | 62.857 | 35 | 13 | 0 | 122 | 156 | 67 | 101 | 2.41e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240800 | AT5G12330.1 | 41.009 | 317 | 163 | 9 | 1 | 312 | 1 | 298 | 2.62e-56 | 186 |
| Msa1240800 | AT5G12330.2 | 41.009 | 317 | 163 | 9 | 1 | 312 | 1 | 298 | 2.62e-56 | 186 |
| Msa1240800 | AT5G12330.4 | 41.009 | 317 | 163 | 9 | 1 | 312 | 88 | 385 | 7.58e-56 | 187 |
| Msa1240800 | AT3G54430.1 | 45.143 | 175 | 64 | 5 | 120 | 293 | 39 | 182 | 2.07e-38 | 135 |
| Msa1240800 | AT1G75520.1 | 42.541 | 181 | 90 | 4 | 110 | 280 | 106 | 282 | 1.00e-37 | 137 |
| Msa1240800 | AT5G66350.3 | 43.575 | 179 | 83 | 3 | 109 | 287 | 107 | 267 | 6.76e-37 | 135 |
| Msa1240800 | AT5G66350.2 | 43.575 | 179 | 83 | 3 | 109 | 287 | 107 | 267 | 9.66e-37 | 135 |
| Msa1240800 | AT5G66350.1 | 43.575 | 179 | 83 | 3 | 109 | 287 | 107 | 267 | 9.87e-37 | 134 |
| Msa1240800 | AT3G51060.1 | 45.625 | 160 | 63 | 4 | 122 | 278 | 144 | 282 | 2.46e-34 | 129 |
| Msa1240800 | AT1G19790.2 | 33.333 | 276 | 151 | 8 | 20 | 280 | 12 | 269 | 1.14e-33 | 127 |
| Msa1240800 | AT1G19790.1 | 33.333 | 276 | 151 | 8 | 20 | 280 | 12 | 269 | 1.14e-33 | 127 |
| Msa1240800 | AT4G36260.1 | 34.956 | 226 | 130 | 5 | 59 | 280 | 32 | 244 | 1.44e-30 | 118 |
| Msa1240800 | AT2G21400.2 | 37.654 | 162 | 72 | 4 | 120 | 281 | 8 | 140 | 2.15e-29 | 111 |
| Msa1240800 | AT2G21400.4 | 37.654 | 162 | 72 | 4 | 120 | 281 | 7 | 139 | 2.45e-29 | 111 |
| Msa1240800 | AT2G18120.1 | 37.423 | 163 | 76 | 3 | 122 | 284 | 72 | 208 | 3.28e-29 | 112 |
| Msa1240800 | AT2G18120.2 | 37.195 | 164 | 73 | 3 | 122 | 284 | 72 | 206 | 3.36e-29 | 112 |
| Msa1240800 | AT2G21400.3 | 35.802 | 162 | 60 | 2 | 120 | 281 | 8 | 125 | 8.08e-28 | 107 |
| Msa1240800 | AT2G21400.1 | 35.802 | 162 | 60 | 2 | 120 | 281 | 7 | 124 | 8.93e-28 | 107 |
| Msa1240800 | AT5G12330.3 | 37.559 | 213 | 116 | 6 | 1 | 208 | 1 | 201 | 2.34e-27 | 107 |
| Msa1240800 | AT5G33210.2 | 70.000 | 50 | 15 | 0 | 122 | 171 | 17 | 66 | 5.55e-20 | 84.0 |
| Msa1240800 | AT5G33210.1 | 70.000 | 50 | 15 | 0 | 122 | 171 | 52 | 101 | 6.10e-19 | 83.2 |
Find 80 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAATAGAATAGGGAGATTT+TGG | 0.131186 | 8_2:-23627281 | None:intergenic |
| TGCTTGTTGAGATTGCTTTA+AGG | 0.163317 | 8_2:+23628957 | Msa1240800:exon |
| TGAGGAAAATGGTGAGTTTA+GGG | 0.245200 | 8_2:+23627795 | Msa1240800:CDS |
| GTATTGTTATAATGATAATT+TGG | 0.246197 | 8_2:+23629019 | Msa1240800:three_prime_UTR |
| GTGAGGAAAATGGTGAGTTT+AGG | 0.284222 | 8_2:+23627794 | Msa1240800:CDS |
| ATATTCTCATTGTTATTGTT+AGG | 0.304242 | 8_2:-23627643 | None:intergenic |
| AGTAGCATTGAGAATAGAAT+AGG | 0.306600 | 8_2:-23627291 | None:intergenic |
| GATGAAGGTAAGGGAAGGTT+TGG | 0.337769 | 8_2:-23627553 | None:intergenic |
| CTATTAGAACCAAGTCTCTT+AGG | 0.357173 | 8_2:-23627471 | None:intergenic |
| GTAGCATTGAGAATAGAATA+GGG | 0.371162 | 8_2:-23627290 | None:intergenic |
| TGAAGATGAACTTGCTTACT+TGG | 0.373159 | 8_2:+23628753 | Msa1240800:CDS |
| AGTGATGGTGGTGCTTCTTC+TGG | 0.380721 | 8_2:+23627982 | Msa1240800:CDS |
| AACAATACAAGTACAACAAA+AGG | 0.390195 | 8_2:-23629004 | None:intergenic |
| TATTCTCATTGTTATTGTTA+GGG | 0.402170 | 8_2:-23627642 | None:intergenic |
| ATGTTCTTCTTCTGCAATTG+AGG | 0.412235 | 8_2:+23628909 | Msa1240800:CDS |
| TGCCAACAGCAGATACTCTA+TGG | 0.431824 | 8_2:-23628726 | None:intergenic |
| TGGATTGTGATCTGATGAAA+TGG | 0.432472 | 8_2:-23627533 | None:intergenic |
| ATGTGTGTGTGATTGTGATT+TGG | 0.443717 | 8_2:-23627337 | None:intergenic |
| TGTTGGTTGTGAAGTGATGA+AGG | 0.446919 | 8_2:-23627502 | None:intergenic |
| CGGCTTCGATGAGGCGGGAC+CGG | 0.454062 | 8_2:+23627932 | Msa1240800:CDS |
| TCAGCCTTAAGTGTTGGTCT+TGG | 0.461126 | 8_2:+23627577 | Msa1240800:CDS |
| TTTAGGGTTTGTCAAGATTG+TGG | 0.461202 | 8_2:+23627811 | Msa1240800:CDS |
| TGTGATCTGATGAAATGGTT+TGG | 0.462496 | 8_2:-23627528 | None:intergenic |
| GATGAGGGTGAGTGGTGGTT+AGG | 0.465386 | 8_2:-23627612 | None:intergenic |
| TAAGGCTGATGATGAAGGTA+AGG | 0.465750 | 8_2:-23627563 | None:intergenic |
| GAATTGCAACTTGGAAGTAA+TGG | 0.469782 | 8_2:+23628865 | Msa1240800:CDS |
| AATGTAATGTAAAGAGAGGA+TGG | 0.472001 | 8_2:-23627389 | None:intergenic |
| CAATCTCAACAAGCAGAGGC+AGG | 0.472994 | 8_2:-23628949 | None:intergenic |
| AATTCCAAGACCAACACTTA+AGG | 0.479333 | 8_2:-23627581 | None:intergenic |
| TCATCATTACTTGTTGTGGT+TGG | 0.483361 | 8_2:-23627702 | None:intergenic |
| AAAGGGTTTCTCTATGATCA+AGG | 0.488489 | 8_2:+23628805 | Msa1240800:CDS |
| CATGTTAGGCCTAAGAGACT+TGG | 0.493330 | 8_2:+23627462 | Msa1240800:CDS |
| TTCATCATCATTACTTGTTG+TGG | 0.498315 | 8_2:-23627706 | None:intergenic |
| AATCAAAATTCTCTGCCTCT+TGG | 0.499143 | 8_2:-23628007 | None:intergenic |
| CGTGAAGAGCACGTGGATAC+CGG | 0.503179 | 8_2:+23627912 | Msa1240800:CDS |
| ATTGTAGCTATAAAAGATGC+AGG | 0.519421 | 8_2:+23627851 | Msa1240800:CDS |
| CAACTTGGAAGTAATGGAAG+TGG | 0.519956 | 8_2:+23628871 | Msa1240800:CDS |
| ACAATACAAGTACAACAAAA+GGG | 0.523268 | 8_2:-23629003 | None:intergenic |
| TAAGTGGCCATGTATTCAAA+GGG | 0.529963 | 8_2:+23628788 | Msa1240800:CDS |
| GGCAAAGTCTGCTTGAAACC+AGG | 0.531084 | 8_2:-23628670 | None:intergenic |
| AGAGAAACCCTTTGAATACA+TGG | 0.531479 | 8_2:-23628795 | None:intergenic |
| ATAAGTGGCCATGTATTCAA+AGG | 0.532258 | 8_2:+23628787 | Msa1240800:CDS |
| ATGATGAGTTGTGAGGAAAA+TGG | 0.532489 | 8_2:+23627784 | Msa1240800:CDS |
| TTGGCTACTGTGAATATAAG+TGG | 0.534470 | 8_2:+23628772 | Msa1240800:CDS |
| CGGTCCCGCCTCATCGAAGC+CGG | 0.540948 | 8_2:-23627931 | None:intergenic |
| GCAGGCGCGCGAACATAGCG+AGG | 0.545668 | 8_2:-23628691 | None:intergenic |
| AGGACTTGTTGTAAAGGTCG+TGG | 0.546270 | 8_2:+23627871 | Msa1240800:CDS |
| AGATGCAGGACTTGTTGTAA+AGG | 0.546985 | 8_2:+23627865 | Msa1240800:CDS |
| ACACTTAAGGCTGATGATGA+AGG | 0.549167 | 8_2:-23627568 | None:intergenic |
| TCATCATCACAGAATAATGC+TGG | 0.553164 | 8_2:+23628030 | Msa1240800:CDS |
| GCTTAAACTTCTTGTTCTAG+TGG | 0.556742 | 8_2:-23628085 | None:intergenic |
| CTATGGCACTTGAAAACAGC+AGG | 0.559201 | 8_2:-23628709 | None:intergenic |
| GGGTGAGTGGTGGTTAGGAG+TGG | 0.561227 | 8_2:-23627607 | None:intergenic |
| TCATCATCAGCCTTAAGTGT+TGG | 0.565429 | 8_2:+23627571 | Msa1240800:CDS |
| GGAGAATGTAATGTAAAGAG+AGG | 0.573573 | 8_2:-23627393 | None:intergenic |
| TGTGTTTCAGAATTGCAACT+TGG | 0.580875 | 8_2:+23628856 | Msa1240800:CDS |
| TGCCATAGAGTATCTGCTGT+TGG | 0.581569 | 8_2:+23628724 | Msa1240800:CDS |
| GCTGAAGGTGGTGACAGTGA+TGG | 0.591111 | 8_2:+23627967 | Msa1240800:CDS |
| GGTGAGTGGTGGTTAGGAGT+GGG | 0.591880 | 8_2:-23627606 | None:intergenic |
| GATACCGGCTTCGATGAGGC+GGG | 0.596250 | 8_2:+23627927 | Msa1240800:CDS |
| GAAGGTGGTGACAGTGATGG+TGG | 0.597594 | 8_2:+23627970 | Msa1240800:CDS |
| TTGATGATGAGGGTGAGTGG+TGG | 0.600442 | 8_2:-23627617 | None:intergenic |
| GGATACCGGCTTCGATGAGG+CGG | 0.605870 | 8_2:+23627926 | Msa1240800:CDS |
| ATGTAATGTAAAGAGAGGAT+GGG | 0.606141 | 8_2:-23627388 | None:intergenic |
| CGGAGTATAATGGTGGCTGA+AGG | 0.609983 | 8_2:+23627952 | Msa1240800:CDS |
| AGAGTATCTGCTGTTGGCAA+TGG | 0.611315 | 8_2:+23628730 | Msa1240800:CDS |
| AAGGCTGATGATGAAGGTAA+GGG | 0.617807 | 8_2:-23627562 | None:intergenic |
| AATCTCAACAAGCAGAGGCA+GGG | 0.619976 | 8_2:-23628948 | None:intergenic |
| GTTGTGGTTGGCACATCTTG+AGG | 0.623886 | 8_2:-23627690 | None:intergenic |
| AAAGCAATCTCAACAAGCAG+AGG | 0.639282 | 8_2:-23628953 | None:intergenic |
| AGTATAATGGTGGCTGAAGG+TGG | 0.640394 | 8_2:+23627955 | Msa1240800:CDS |
| CTGATGATGAAGGTAAGGGA+AGG | 0.648978 | 8_2:-23627558 | None:intergenic |
| GTGCTTCTTCTGGTACCAAG+AGG | 0.651535 | 8_2:+23627992 | Msa1240800:CDS |
| CGTGGATACCGGCTTCGATG+AGG | 0.652315 | 8_2:+23627923 | Msa1240800:CDS |
| ATAACTAGCTCTTGTCACCA+AGG | 0.669802 | 8_2:+23628114 | Msa1240800:CDS |
| CTTCAGCCACCATTATACTC+CGG | 0.671646 | 8_2:-23627951 | None:intergenic |
| GCGGGACCGGAGTATAATGG+TGG | 0.673873 | 8_2:+23627945 | Msa1240800:CDS |
| GTACTCACGTGAAGAGCACG+TGG | 0.684544 | 8_2:+23627905 | Msa1240800:CDS |
| AGTTGCAATTCTGAAACACA+AGG | 0.685469 | 8_2:-23628853 | None:intergenic |
| AAACTTGATGATGAGTTGTG+AGG | 0.719490 | 8_2:+23627777 | Msa1240800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATATGATTATTTAATCA+TGG | - | chr8_2:23628157-23628176 | None:intergenic | 10.0% |
| !!! | TTTGTTATTTCATAAATTTA+AGG | + | chr8_2:23628400-23628419 | Msa1240800:intron | 10.0% |
| !!! | TTGTTATTTCATAAATTTAA+GGG | + | chr8_2:23628401-23628420 | Msa1240800:intron | 10.0% |
| !! | TTAATATGATTATTTAATCA+TGG | - | chr8_2:23628157-23628176 | None:intergenic | 10.0% |
| !!! | TTTGTTATTTCATAAATTTA+AGG | + | chr8_2:23628400-23628419 | Msa1240800:intron | 10.0% |
| !!! | TTGTTATTTCATAAATTTAA+GGG | + | chr8_2:23628401-23628420 | Msa1240800:intron | 10.0% |
| !!! | TTTGGTTTTGTTTATTTATT+GGG | - | chr8_2:23627417-23627436 | None:intergenic | 15.0% |
| !!! | TTTTGGTTTTGTTTATTTAT+TGG | - | chr8_2:23627418-23627437 | None:intergenic | 15.0% |
| !!! | GTTTACAAAACTTTTTTTTA+TGG | + | chr8_2:23628183-23628202 | Msa1240800:intron | 15.0% |
| !! | ATTAAAAAAAGTGAGTAAAT+AGG | - | chr8_2:23628470-23628489 | None:intergenic | 15.0% |
| !! | GTATTGTTATAATGATAATT+TGG | + | chr8_2:23629019-23629038 | Msa1240800:three_prime_UTR | 15.0% |
| !!! | TTGGTTTTAGAAAATAAAAT+TGG | + | chr8_2:23629038-23629057 | Msa1240800:three_prime_UTR | 15.0% |
| !!! | TTTGGTTTTGTTTATTTATT+GGG | - | chr8_2:23627417-23627436 | None:intergenic | 15.0% |
| !!! | TTTTGGTTTTGTTTATTTAT+TGG | - | chr8_2:23627418-23627437 | None:intergenic | 15.0% |
| !!! | GTTTACAAAACTTTTTTTTA+TGG | + | chr8_2:23628183-23628202 | Msa1240800:intron | 15.0% |
| !! | ATTAAAAAAAGTGAGTAAAT+AGG | - | chr8_2:23628470-23628489 | None:intergenic | 15.0% |
| !! | GTATTGTTATAATGATAATT+TGG | + | chr8_2:23629019-23629038 | Msa1240800:three_prime_UTR | 15.0% |
| !!! | TTGGTTTTAGAAAATAAAAT+TGG | + | chr8_2:23629038-23629057 | Msa1240800:three_prime_UTR | 15.0% |
| !!! | TTATGTATTGTTTTGTTTAG+GGG | - | chr8_2:23627317-23627336 | None:intergenic | 20.0% |
| !!! | GTTATGTATTGTTTTGTTTA+GGG | - | chr8_2:23627318-23627337 | None:intergenic | 20.0% |
| !!! | TATTCTCATTGTTATTGTTA+GGG | - | chr8_2:23627645-23627664 | None:intergenic | 20.0% |
| !!! | ATATTCTCATTGTTATTGTT+AGG | - | chr8_2:23627646-23627665 | None:intergenic | 20.0% |
| !!! | TCATTGTTACTTTATAAACT+AGG | + | chr8_2:23628493-23628512 | Msa1240800:intron | 20.0% |
| !!! | TTTTTCTATTAACCAAACTT+AGG | - | chr8_2:23628549-23628568 | None:intergenic | 20.0% |
| !!! | TTATGTATTGTTTTGTTTAG+GGG | - | chr8_2:23627317-23627336 | None:intergenic | 20.0% |
| !!! | GTTATGTATTGTTTTGTTTA+GGG | - | chr8_2:23627318-23627337 | None:intergenic | 20.0% |
| !!! | TATTCTCATTGTTATTGTTA+GGG | - | chr8_2:23627645-23627664 | None:intergenic | 20.0% |
| !!! | ATATTCTCATTGTTATTGTT+AGG | - | chr8_2:23627646-23627665 | None:intergenic | 20.0% |
| !!! | TCATTGTTACTTTATAAACT+AGG | + | chr8_2:23628493-23628512 | Msa1240800:intron | 20.0% |
| !!! | TTTTTCTATTAACCAAACTT+AGG | - | chr8_2:23628549-23628568 | None:intergenic | 20.0% |
| !!! | GGTTATGTATTGTTTTGTTT+AGG | - | chr8_2:23627319-23627338 | None:intergenic | 25.0% |
| !! | TTCATCAAGACTCAAATTTT+TGG | + | chr8_2:23627665-23627684 | Msa1240800:CDS | 25.0% |
| ! | AATTGTGTATATCCTAAGTT+TGG | + | chr8_2:23628534-23628553 | Msa1240800:intron | 25.0% |
| ! | ACAATACAAGTACAACAAAA+GGG | - | chr8_2:23629006-23629025 | None:intergenic | 25.0% |
| ! | AACAATACAAGTACAACAAA+AGG | - | chr8_2:23629007-23629026 | None:intergenic | 25.0% |
| !!! | GGTTATGTATTGTTTTGTTT+AGG | - | chr8_2:23627319-23627338 | None:intergenic | 25.0% |
| !! | TTCATCAAGACTCAAATTTT+TGG | + | chr8_2:23627665-23627684 | Msa1240800:CDS | 25.0% |
| ! | AATTGTGTATATCCTAAGTT+TGG | + | chr8_2:23628534-23628553 | Msa1240800:intron | 25.0% |
| ! | ACAATACAAGTACAACAAAA+GGG | - | chr8_2:23629006-23629025 | None:intergenic | 25.0% |
| ! | AACAATACAAGTACAACAAA+AGG | - | chr8_2:23629007-23629026 | None:intergenic | 25.0% |
| ! | AGAATAGAATAGGGAGATTT+TGG | - | chr8_2:23627284-23627303 | None:intergenic | 30.0% |
| ! | GTAGCATTGAGAATAGAATA+GGG | - | chr8_2:23627293-23627312 | None:intergenic | 30.0% |
| ! | AGTAGCATTGAGAATAGAAT+AGG | - | chr8_2:23627294-23627313 | None:intergenic | 30.0% |
| ATGTAATGTAAAGAGAGGAT+GGG | - | chr8_2:23627391-23627410 | None:intergenic | 30.0% | |
| AATGTAATGTAAAGAGAGGA+TGG | - | chr8_2:23627392-23627411 | None:intergenic | 30.0% | |
| !! | TCATTTTTGCAACAAGGTTT+TGG | - | chr8_2:23627441-23627460 | None:intergenic | 30.0% |
| !! | ACATGTTCATTTTTGCAACA+AGG | - | chr8_2:23627447-23627466 | None:intergenic | 30.0% |
| GTTGCAAAAATGAACATGTT+AGG | + | chr8_2:23627448-23627467 | Msa1240800:exon | 30.0% | |
| !!! | ATGAAATGGTTTGGTTTTGT+TGG | - | chr8_2:23627522-23627541 | None:intergenic | 30.0% |
| ! | TTCATCATCATTACTTGTTG+TGG | - | chr8_2:23627709-23627728 | None:intergenic | 30.0% |
| ATTGTAGCTATAAAAGATGC+AGG | + | chr8_2:23627851-23627870 | Msa1240800:CDS | 30.0% | |
| !! | AACAAAAAGTGAAAGTACCT+TGG | - | chr8_2:23628134-23628153 | None:intergenic | 30.0% |
| CGGATAATGATTTACAGAAA+TGG | + | chr8_2:23628261-23628280 | Msa1240800:intron | 30.0% | |
| ATCAATCAATTTAGTCTCAG+AGG | - | chr8_2:23628360-23628379 | None:intergenic | 30.0% | |
| ! | AGAATAGAATAGGGAGATTT+TGG | - | chr8_2:23627284-23627303 | None:intergenic | 30.0% |
| ! | GTAGCATTGAGAATAGAATA+GGG | - | chr8_2:23627293-23627312 | None:intergenic | 30.0% |
| ! | AGTAGCATTGAGAATAGAAT+AGG | - | chr8_2:23627294-23627313 | None:intergenic | 30.0% |
| ATGTAATGTAAAGAGAGGAT+GGG | - | chr8_2:23627391-23627410 | None:intergenic | 30.0% | |
| AATGTAATGTAAAGAGAGGA+TGG | - | chr8_2:23627392-23627411 | None:intergenic | 30.0% | |
| !! | TCATTTTTGCAACAAGGTTT+TGG | - | chr8_2:23627441-23627460 | None:intergenic | 30.0% |
| !! | ACATGTTCATTTTTGCAACA+AGG | - | chr8_2:23627447-23627466 | None:intergenic | 30.0% |
| GTTGCAAAAATGAACATGTT+AGG | + | chr8_2:23627448-23627467 | Msa1240800:exon | 30.0% | |
| !!! | ATGAAATGGTTTGGTTTTGT+TGG | - | chr8_2:23627522-23627541 | None:intergenic | 30.0% |
| ! | TTCATCATCATTACTTGTTG+TGG | - | chr8_2:23627709-23627728 | None:intergenic | 30.0% |
| ATTGTAGCTATAAAAGATGC+AGG | + | chr8_2:23627851-23627870 | Msa1240800:CDS | 30.0% | |
| !! | AACAAAAAGTGAAAGTACCT+TGG | - | chr8_2:23628134-23628153 | None:intergenic | 30.0% |
| CGGATAATGATTTACAGAAA+TGG | + | chr8_2:23628261-23628280 | Msa1240800:intron | 30.0% | |
| ATCAATCAATTTAGTCTCAG+AGG | - | chr8_2:23628360-23628379 | None:intergenic | 30.0% | |
| ATGTGTGTGTGATTGTGATT+TGG | - | chr8_2:23627340-23627359 | None:intergenic | 35.0% | |
| GGAGAATGTAATGTAAAGAG+AGG | - | chr8_2:23627396-23627415 | None:intergenic | 35.0% | |
| !!! | TTGCAACAAGGTTTTGGTTT+TGG | - | chr8_2:23627435-23627454 | None:intergenic | 35.0% |
| CTATTAGAACCAAGTCTCTT+AGG | - | chr8_2:23627474-23627493 | None:intergenic | 35.0% | |
| TGTGATCTGATGAAATGGTT+TGG | - | chr8_2:23627531-23627550 | None:intergenic | 35.0% | |
| TGGATTGTGATCTGATGAAA+TGG | - | chr8_2:23627536-23627555 | None:intergenic | 35.0% | |
| AATTCCAAGACCAACACTTA+AGG | - | chr8_2:23627584-23627603 | None:intergenic | 35.0% | |
| !!! | TGTTAGGGTTTTGATGATGA+GGG | - | chr8_2:23627630-23627649 | None:intergenic | 35.0% |
| !!! | TTGTTAGGGTTTTGATGATG+AGG | - | chr8_2:23627631-23627650 | None:intergenic | 35.0% |
| !! | TCATCATTACTTGTTGTGGT+TGG | - | chr8_2:23627705-23627724 | None:intergenic | 35.0% |
| !! | AAACTTGATGATGAGTTGTG+AGG | + | chr8_2:23627777-23627796 | Msa1240800:CDS | 35.0% |
| ATGATGAGTTGTGAGGAAAA+TGG | + | chr8_2:23627784-23627803 | Msa1240800:CDS | 35.0% | |
| TGAGGAAAATGGTGAGTTTA+GGG | + | chr8_2:23627795-23627814 | Msa1240800:CDS | 35.0% | |
| ! | TTTAGGGTTTGTCAAGATTG+TGG | + | chr8_2:23627811-23627830 | Msa1240800:CDS | 35.0% |
| AATCAAAATTCTCTGCCTCT+TGG | - | chr8_2:23628010-23628029 | None:intergenic | 35.0% | |
| TCATCATCACAGAATAATGC+TGG | + | chr8_2:23628030-23628049 | Msa1240800:CDS | 35.0% | |
| GCTTAAACTTCTTGTTCTAG+TGG | - | chr8_2:23628088-23628107 | None:intergenic | 35.0% | |
| CTGTAAATCATTATCCGTGT+CGG | - | chr8_2:23628258-23628277 | None:intergenic | 35.0% | |
| GCATAATCCAGTGTAATCAT+AGG | + | chr8_2:23628283-23628302 | Msa1240800:intron | 35.0% | |
| TGGTTAATAGAAAAATGCCC+CGG | + | chr8_2:23628554-23628573 | Msa1240800:intron | 35.0% | |
| ! | TGAAGATGAACTTGCTTACT+TGG | + | chr8_2:23628753-23628772 | Msa1240800:CDS | 35.0% |
| TTGGCTACTGTGAATATAAG+TGG | + | chr8_2:23628772-23628791 | Msa1240800:CDS | 35.0% | |
| ATAAGTGGCCATGTATTCAA+AGG | + | chr8_2:23628787-23628806 | Msa1240800:CDS | 35.0% | |
| TAAGTGGCCATGTATTCAAA+GGG | + | chr8_2:23628788-23628807 | Msa1240800:CDS | 35.0% | |
| AGAGAAACCCTTTGAATACA+TGG | - | chr8_2:23628798-23628817 | None:intergenic | 35.0% | |
| AAAGGGTTTCTCTATGATCA+AGG | + | chr8_2:23628805-23628824 | Msa1240800:CDS | 35.0% | |
| !! | AGTTGCAATTCTGAAACACA+AGG | - | chr8_2:23628856-23628875 | None:intergenic | 35.0% |
| TGTGTTTCAGAATTGCAACT+TGG | + | chr8_2:23628856-23628875 | Msa1240800:CDS | 35.0% | |
| GAATTGCAACTTGGAAGTAA+TGG | + | chr8_2:23628865-23628884 | Msa1240800:CDS | 35.0% | |
| ATGTTCTTCTTCTGCAATTG+AGG | + | chr8_2:23628909-23628928 | Msa1240800:CDS | 35.0% | |
| ! | TGCTTGTTGAGATTGCTTTA+AGG | + | chr8_2:23628957-23628976 | Msa1240800:exon | 35.0% |
| ATGTGTGTGTGATTGTGATT+TGG | - | chr8_2:23627340-23627359 | None:intergenic | 35.0% | |
| GGAGAATGTAATGTAAAGAG+AGG | - | chr8_2:23627396-23627415 | None:intergenic | 35.0% | |
| !!! | TTGCAACAAGGTTTTGGTTT+TGG | - | chr8_2:23627435-23627454 | None:intergenic | 35.0% |
| CTATTAGAACCAAGTCTCTT+AGG | - | chr8_2:23627474-23627493 | None:intergenic | 35.0% | |
| TGTGATCTGATGAAATGGTT+TGG | - | chr8_2:23627531-23627550 | None:intergenic | 35.0% | |
| TGGATTGTGATCTGATGAAA+TGG | - | chr8_2:23627536-23627555 | None:intergenic | 35.0% | |
| AATTCCAAGACCAACACTTA+AGG | - | chr8_2:23627584-23627603 | None:intergenic | 35.0% | |
| !!! | TGTTAGGGTTTTGATGATGA+GGG | - | chr8_2:23627630-23627649 | None:intergenic | 35.0% |
| !!! | TTGTTAGGGTTTTGATGATG+AGG | - | chr8_2:23627631-23627650 | None:intergenic | 35.0% |
| !! | TCATCATTACTTGTTGTGGT+TGG | - | chr8_2:23627705-23627724 | None:intergenic | 35.0% |
| !! | AAACTTGATGATGAGTTGTG+AGG | + | chr8_2:23627777-23627796 | Msa1240800:CDS | 35.0% |
| ATGATGAGTTGTGAGGAAAA+TGG | + | chr8_2:23627784-23627803 | Msa1240800:CDS | 35.0% | |
| TGAGGAAAATGGTGAGTTTA+GGG | + | chr8_2:23627795-23627814 | Msa1240800:CDS | 35.0% | |
| ! | TTTAGGGTTTGTCAAGATTG+TGG | + | chr8_2:23627811-23627830 | Msa1240800:CDS | 35.0% |
| AATCAAAATTCTCTGCCTCT+TGG | - | chr8_2:23628010-23628029 | None:intergenic | 35.0% | |
| TCATCATCACAGAATAATGC+TGG | + | chr8_2:23628030-23628049 | Msa1240800:CDS | 35.0% | |
| GCTTAAACTTCTTGTTCTAG+TGG | - | chr8_2:23628088-23628107 | None:intergenic | 35.0% | |
| CTGTAAATCATTATCCGTGT+CGG | - | chr8_2:23628258-23628277 | None:intergenic | 35.0% | |
| GCATAATCCAGTGTAATCAT+AGG | + | chr8_2:23628283-23628302 | Msa1240800:intron | 35.0% | |
| TGGTTAATAGAAAAATGCCC+CGG | + | chr8_2:23628554-23628573 | Msa1240800:intron | 35.0% | |
| ! | TGAAGATGAACTTGCTTACT+TGG | + | chr8_2:23628753-23628772 | Msa1240800:CDS | 35.0% |
| TTGGCTACTGTGAATATAAG+TGG | + | chr8_2:23628772-23628791 | Msa1240800:CDS | 35.0% | |
| ATAAGTGGCCATGTATTCAA+AGG | + | chr8_2:23628787-23628806 | Msa1240800:CDS | 35.0% | |
| TAAGTGGCCATGTATTCAAA+GGG | + | chr8_2:23628788-23628807 | Msa1240800:CDS | 35.0% | |
| AGAGAAACCCTTTGAATACA+TGG | - | chr8_2:23628798-23628817 | None:intergenic | 35.0% | |
| AAAGGGTTTCTCTATGATCA+AGG | + | chr8_2:23628805-23628824 | Msa1240800:CDS | 35.0% | |
| !! | AGTTGCAATTCTGAAACACA+AGG | - | chr8_2:23628856-23628875 | None:intergenic | 35.0% |
| TGTGTTTCAGAATTGCAACT+TGG | + | chr8_2:23628856-23628875 | Msa1240800:CDS | 35.0% | |
| GAATTGCAACTTGGAAGTAA+TGG | + | chr8_2:23628865-23628884 | Msa1240800:CDS | 35.0% | |
| ATGTTCTTCTTCTGCAATTG+AGG | + | chr8_2:23628909-23628928 | Msa1240800:CDS | 35.0% | |
| ! | TGCTTGTTGAGATTGCTTTA+AGG | + | chr8_2:23628957-23628976 | Msa1240800:exon | 35.0% |
| !!! | AGGGAGATTTTGGAACAGAA+AGG | - | chr8_2:23627274-23627293 | None:intergenic | 40.0% |
| ! | TGTTGGTTGTGAAGTGATGA+AGG | - | chr8_2:23627505-23627524 | None:intergenic | 40.0% |
| ! | AAGGCTGATGATGAAGGTAA+GGG | - | chr8_2:23627565-23627584 | None:intergenic | 40.0% |
| ! | TAAGGCTGATGATGAAGGTA+AGG | - | chr8_2:23627566-23627585 | None:intergenic | 40.0% |
| ! | ACACTTAAGGCTGATGATGA+AGG | - | chr8_2:23627571-23627590 | None:intergenic | 40.0% |
| TCATCATCAGCCTTAAGTGT+TGG | + | chr8_2:23627571-23627590 | Msa1240800:CDS | 40.0% | |
| GTGAGGAAAATGGTGAGTTT+AGG | + | chr8_2:23627794-23627813 | Msa1240800:CDS | 40.0% | |
| !! | AGATGCAGGACTTGTTGTAA+AGG | + | chr8_2:23627865-23627884 | Msa1240800:CDS | 40.0% |
| ! | ATAACTAGCTCTTGTCACCA+AGG | + | chr8_2:23628114-23628133 | Msa1240800:CDS | 40.0% |
| ! | TGTAATCATAGGTGTCGTGT+CGG | + | chr8_2:23628294-23628313 | Msa1240800:intron | 40.0% |
| TTAATAGAAAAATGCCCCGG+AGG | + | chr8_2:23628557-23628576 | Msa1240800:intron | 40.0% | |
| TGTTTGTGAATTGCAGATCC+TGG | + | chr8_2:23628652-23628671 | Msa1240800:intron | 40.0% | |
| ! | CAACTTGGAAGTAATGGAAG+TGG | + | chr8_2:23628871-23628890 | Msa1240800:CDS | 40.0% |
| AAAGCAATCTCAACAAGCAG+AGG | - | chr8_2:23628956-23628975 | None:intergenic | 40.0% | |
| !!! | AGGGAGATTTTGGAACAGAA+AGG | - | chr8_2:23627274-23627293 | None:intergenic | 40.0% |
| ! | TGTTGGTTGTGAAGTGATGA+AGG | - | chr8_2:23627505-23627524 | None:intergenic | 40.0% |
| ! | AAGGCTGATGATGAAGGTAA+GGG | - | chr8_2:23627565-23627584 | None:intergenic | 40.0% |
| ! | TAAGGCTGATGATGAAGGTA+AGG | - | chr8_2:23627566-23627585 | None:intergenic | 40.0% |
| ! | ACACTTAAGGCTGATGATGA+AGG | - | chr8_2:23627571-23627590 | None:intergenic | 40.0% |
| TCATCATCAGCCTTAAGTGT+TGG | + | chr8_2:23627571-23627590 | Msa1240800:CDS | 40.0% | |
| GTGAGGAAAATGGTGAGTTT+AGG | + | chr8_2:23627794-23627813 | Msa1240800:CDS | 40.0% | |
| !! | AGATGCAGGACTTGTTGTAA+AGG | + | chr8_2:23627865-23627884 | Msa1240800:CDS | 40.0% |
| ! | ATAACTAGCTCTTGTCACCA+AGG | + | chr8_2:23628114-23628133 | Msa1240800:CDS | 40.0% |
| ! | TGTAATCATAGGTGTCGTGT+CGG | + | chr8_2:23628294-23628313 | Msa1240800:intron | 40.0% |
| TTAATAGAAAAATGCCCCGG+AGG | + | chr8_2:23628557-23628576 | Msa1240800:intron | 40.0% | |
| TGTTTGTGAATTGCAGATCC+TGG | + | chr8_2:23628652-23628671 | Msa1240800:intron | 40.0% | |
| ! | CAACTTGGAAGTAATGGAAG+TGG | + | chr8_2:23628871-23628890 | Msa1240800:CDS | 40.0% |
| AAAGCAATCTCAACAAGCAG+AGG | - | chr8_2:23628956-23628975 | None:intergenic | 40.0% | |
| CATGTTAGGCCTAAGAGACT+TGG | + | chr8_2:23627462-23627481 | Msa1240800:CDS | 45.0% | |
| GATGAAGGTAAGGGAAGGTT+TGG | - | chr8_2:23627556-23627575 | None:intergenic | 45.0% | |
| ! | CTGATGATGAAGGTAAGGGA+AGG | - | chr8_2:23627561-23627580 | None:intergenic | 45.0% |
| !! | TCAGCCTTAAGTGTTGGTCT+TGG | + | chr8_2:23627577-23627596 | Msa1240800:CDS | 45.0% |
| !!! | GTTTTGATGATGAGGGTGAG+TGG | - | chr8_2:23627623-23627642 | None:intergenic | 45.0% |
| !! | AGGACTTGTTGTAAAGGTCG+TGG | + | chr8_2:23627871-23627890 | Msa1240800:CDS | 45.0% |
| CTTCAGCCACCATTATACTC+CGG | - | chr8_2:23627954-23627973 | None:intergenic | 45.0% | |
| AGTATAATGGTGGCTGAAGG+TGG | + | chr8_2:23627955-23627974 | Msa1240800:CDS | 45.0% | |
| TGTCCGTGTTTCATAGGTCT+CGG | - | chr8_2:23628209-23628228 | None:intergenic | 45.0% | |
| CACGACACCTATGATTACAC+TGG | - | chr8_2:23628293-23628312 | None:intergenic | 45.0% | |
| !! | ATTTAGTCTCAGAGGTGTCC+TGG | - | chr8_2:23628352-23628371 | None:intergenic | 45.0% |
| GTCAGAGAGGTAGACACAAT+TGG | + | chr8_2:23628594-23628613 | Msa1240800:intron | 45.0% | |
| CTATGGCACTTGAAAACAGC+AGG | - | chr8_2:23628712-23628731 | None:intergenic | 45.0% | |
| ! | TGCCATAGAGTATCTGCTGT+TGG | + | chr8_2:23628724-23628743 | Msa1240800:CDS | 45.0% |
| TGCCAACAGCAGATACTCTA+TGG | - | chr8_2:23628729-23628748 | None:intergenic | 45.0% | |
| ! | AGAGTATCTGCTGTTGGCAA+TGG | + | chr8_2:23628730-23628749 | Msa1240800:CDS | 45.0% |
| AATCTCAACAAGCAGAGGCA+GGG | - | chr8_2:23628951-23628970 | None:intergenic | 45.0% | |
| CATGTTAGGCCTAAGAGACT+TGG | + | chr8_2:23627462-23627481 | Msa1240800:CDS | 45.0% | |
| GATGAAGGTAAGGGAAGGTT+TGG | - | chr8_2:23627556-23627575 | None:intergenic | 45.0% | |
| ! | CTGATGATGAAGGTAAGGGA+AGG | - | chr8_2:23627561-23627580 | None:intergenic | 45.0% |
| !! | TCAGCCTTAAGTGTTGGTCT+TGG | + | chr8_2:23627577-23627596 | Msa1240800:CDS | 45.0% |
| !!! | GTTTTGATGATGAGGGTGAG+TGG | - | chr8_2:23627623-23627642 | None:intergenic | 45.0% |
| !! | AGGACTTGTTGTAAAGGTCG+TGG | + | chr8_2:23627871-23627890 | Msa1240800:CDS | 45.0% |
| CTTCAGCCACCATTATACTC+CGG | - | chr8_2:23627954-23627973 | None:intergenic | 45.0% | |
| AGTATAATGGTGGCTGAAGG+TGG | + | chr8_2:23627955-23627974 | Msa1240800:CDS | 45.0% | |
| TGTCCGTGTTTCATAGGTCT+CGG | - | chr8_2:23628209-23628228 | None:intergenic | 45.0% | |
| CACGACACCTATGATTACAC+TGG | - | chr8_2:23628293-23628312 | None:intergenic | 45.0% | |
| !! | ATTTAGTCTCAGAGGTGTCC+TGG | - | chr8_2:23628352-23628371 | None:intergenic | 45.0% |
| GTCAGAGAGGTAGACACAAT+TGG | + | chr8_2:23628594-23628613 | Msa1240800:intron | 45.0% | |
| CTATGGCACTTGAAAACAGC+AGG | - | chr8_2:23628712-23628731 | None:intergenic | 45.0% | |
| ! | TGCCATAGAGTATCTGCTGT+TGG | + | chr8_2:23628724-23628743 | Msa1240800:CDS | 45.0% |
| TGCCAACAGCAGATACTCTA+TGG | - | chr8_2:23628729-23628748 | None:intergenic | 45.0% | |
| ! | AGAGTATCTGCTGTTGGCAA+TGG | + | chr8_2:23628730-23628749 | Msa1240800:CDS | 45.0% |
| AATCTCAACAAGCAGAGGCA+GGG | - | chr8_2:23628951-23628970 | None:intergenic | 45.0% | |
| !! | TTGATGATGAGGGTGAGTGG+TGG | - | chr8_2:23627620-23627639 | None:intergenic | 50.0% |
| GTTGTGGTTGGCACATCTTG+AGG | - | chr8_2:23627693-23627712 | None:intergenic | 50.0% | |
| CGGAGTATAATGGTGGCTGA+AGG | + | chr8_2:23627952-23627971 | Msa1240800:CDS | 50.0% | |
| !! | AGTGATGGTGGTGCTTCTTC+TGG | + | chr8_2:23627982-23628001 | Msa1240800:CDS | 50.0% |
| GTGCTTCTTCTGGTACCAAG+AGG | + | chr8_2:23627992-23628011 | Msa1240800:CDS | 50.0% | |
| TGGCCGAGACCTATGAAACA+CGG | + | chr8_2:23628203-23628222 | Msa1240800:intron | 50.0% | |
| GTCTGGTGTCCGTGTTTCAT+AGG | - | chr8_2:23628215-23628234 | None:intergenic | 50.0% | |
| CGAACACGAACATACCGACA+CGG | + | chr8_2:23628241-23628260 | Msa1240800:intron | 50.0% | |
| ! | CATAGGTGTCGTGTCGGTAT+CGG | + | chr8_2:23628300-23628319 | Msa1240800:intron | 50.0% |
| GGCAAAGTCTGCTTGAAACC+AGG | - | chr8_2:23628673-23628692 | None:intergenic | 50.0% | |
| CAATCTCAACAAGCAGAGGC+AGG | - | chr8_2:23628952-23628971 | None:intergenic | 50.0% | |
| !! | TTGATGATGAGGGTGAGTGG+TGG | - | chr8_2:23627620-23627639 | None:intergenic | 50.0% |
| GTTGTGGTTGGCACATCTTG+AGG | - | chr8_2:23627693-23627712 | None:intergenic | 50.0% | |
| CGGAGTATAATGGTGGCTGA+AGG | + | chr8_2:23627952-23627971 | Msa1240800:CDS | 50.0% | |
| !! | AGTGATGGTGGTGCTTCTTC+TGG | + | chr8_2:23627982-23628001 | Msa1240800:CDS | 50.0% |
| GTGCTTCTTCTGGTACCAAG+AGG | + | chr8_2:23627992-23628011 | Msa1240800:CDS | 50.0% | |
| TGGCCGAGACCTATGAAACA+CGG | + | chr8_2:23628203-23628222 | Msa1240800:intron | 50.0% | |
| GTCTGGTGTCCGTGTTTCAT+AGG | - | chr8_2:23628215-23628234 | None:intergenic | 50.0% | |
| CGAACACGAACATACCGACA+CGG | + | chr8_2:23628241-23628260 | Msa1240800:intron | 50.0% | |
| ! | CATAGGTGTCGTGTCGGTAT+CGG | + | chr8_2:23628300-23628319 | Msa1240800:intron | 50.0% |
| GGCAAAGTCTGCTTGAAACC+AGG | - | chr8_2:23628673-23628692 | None:intergenic | 50.0% | |
| CAATCTCAACAAGCAGAGGC+AGG | - | chr8_2:23628952-23628971 | None:intergenic | 50.0% | |
| GGTGAGTGGTGGTTAGGAGT+GGG | - | chr8_2:23627609-23627628 | None:intergenic | 55.0% | |
| GATGAGGGTGAGTGGTGGTT+AGG | - | chr8_2:23627615-23627634 | None:intergenic | 55.0% | |
| ! | GTACTCACGTGAAGAGCACG+TGG | + | chr8_2:23627905-23627924 | Msa1240800:CDS | 55.0% |
| ! | CGTGAAGAGCACGTGGATAC+CGG | + | chr8_2:23627912-23627931 | Msa1240800:CDS | 55.0% |
| GCTGAAGGTGGTGACAGTGA+TGG | + | chr8_2:23627967-23627986 | Msa1240800:CDS | 55.0% | |
| GAAGGTGGTGACAGTGATGG+TGG | + | chr8_2:23627970-23627989 | Msa1240800:CDS | 55.0% | |
| GTTCGTGTTCGTGTCGTGTC+TGG | - | chr8_2:23628232-23628251 | None:intergenic | 55.0% | |
| !! | TGTCGTGTCGGTATCGGTGT+TGG | + | chr8_2:23628306-23628325 | Msa1240800:intron | 55.0% |
| !! | TCTCAGAGGTGTCCTGGTGT+CGG | - | chr8_2:23628346-23628365 | None:intergenic | 55.0% |
| AGAAAAATGCCCCGGAGGCA+TGG | + | chr8_2:23628562-23628581 | Msa1240800:intron | 55.0% | |
| ATGGTCGTCACTCGTCAGAG+AGG | + | chr8_2:23628581-23628600 | Msa1240800:intron | 55.0% | |
| GGTGAGTGGTGGTTAGGAGT+GGG | - | chr8_2:23627609-23627628 | None:intergenic | 55.0% | |
| GATGAGGGTGAGTGGTGGTT+AGG | - | chr8_2:23627615-23627634 | None:intergenic | 55.0% | |
| ! | GTACTCACGTGAAGAGCACG+TGG | + | chr8_2:23627905-23627924 | Msa1240800:CDS | 55.0% |
| ! | CGTGAAGAGCACGTGGATAC+CGG | + | chr8_2:23627912-23627931 | Msa1240800:CDS | 55.0% |
| GCTGAAGGTGGTGACAGTGA+TGG | + | chr8_2:23627967-23627986 | Msa1240800:CDS | 55.0% | |
| GAAGGTGGTGACAGTGATGG+TGG | + | chr8_2:23627970-23627989 | Msa1240800:CDS | 55.0% | |
| GTTCGTGTTCGTGTCGTGTC+TGG | - | chr8_2:23628232-23628251 | None:intergenic | 55.0% | |
| !! | TGTCGTGTCGGTATCGGTGT+TGG | + | chr8_2:23628306-23628325 | Msa1240800:intron | 55.0% |
| !! | TCTCAGAGGTGTCCTGGTGT+CGG | - | chr8_2:23628346-23628365 | None:intergenic | 55.0% |
| AGAAAAATGCCCCGGAGGCA+TGG | + | chr8_2:23628562-23628581 | Msa1240800:intron | 55.0% | |
| ATGGTCGTCACTCGTCAGAG+AGG | + | chr8_2:23628581-23628600 | Msa1240800:intron | 55.0% | |
| GGGTGAGTGGTGGTTAGGAG+TGG | - | chr8_2:23627610-23627629 | None:intergenic | 60.0% | |
| !! | CGTGGATACCGGCTTCGATG+AGG | + | chr8_2:23627923-23627942 | Msa1240800:CDS | 60.0% |
| !! | GGATACCGGCTTCGATGAGG+CGG | + | chr8_2:23627926-23627945 | Msa1240800:CDS | 60.0% |
| !! | GATACCGGCTTCGATGAGGC+GGG | + | chr8_2:23627927-23627946 | Msa1240800:CDS | 60.0% |
| GAGGCGGGACCGGAGTATAA+TGG | + | chr8_2:23627942-23627961 | Msa1240800:CDS | 60.0% | |
| GCGGGACCGGAGTATAATGG+TGG | + | chr8_2:23627945-23627964 | Msa1240800:CDS | 60.0% | |
| ATCGACGTGTGTCCGACACC+AGG | + | chr8_2:23628331-23628350 | Msa1240800:intron | 60.0% | |
| ACGAGTGACGACCATGCCTC+CGG | - | chr8_2:23628576-23628595 | None:intergenic | 60.0% | |
| GGGTGAGTGGTGGTTAGGAG+TGG | - | chr8_2:23627610-23627629 | None:intergenic | 60.0% | |
| !! | CGTGGATACCGGCTTCGATG+AGG | + | chr8_2:23627923-23627942 | Msa1240800:CDS | 60.0% |
| !! | GGATACCGGCTTCGATGAGG+CGG | + | chr8_2:23627926-23627945 | Msa1240800:CDS | 60.0% |
| !! | GATACCGGCTTCGATGAGGC+GGG | + | chr8_2:23627927-23627946 | Msa1240800:CDS | 60.0% |
| GAGGCGGGACCGGAGTATAA+TGG | + | chr8_2:23627942-23627961 | Msa1240800:CDS | 60.0% | |
| GCGGGACCGGAGTATAATGG+TGG | + | chr8_2:23627945-23627964 | Msa1240800:CDS | 60.0% | |
| ATCGACGTGTGTCCGACACC+AGG | + | chr8_2:23628331-23628350 | Msa1240800:intron | 60.0% | |
| ACGAGTGACGACCATGCCTC+CGG | - | chr8_2:23628576-23628595 | None:intergenic | 60.0% | |
| GAGTGACGACCATGCCTCCG+GGG | - | chr8_2:23628574-23628593 | None:intergenic | 65.0% | |
| CGAGTGACGACCATGCCTCC+GGG | - | chr8_2:23628575-23628594 | None:intergenic | 65.0% | |
| GAGTGACGACCATGCCTCCG+GGG | - | chr8_2:23628574-23628593 | None:intergenic | 65.0% | |
| CGAGTGACGACCATGCCTCC+GGG | - | chr8_2:23628575-23628594 | None:intergenic | 65.0% | |
| CGGTCCCGCCTCATCGAAGC+CGG | - | chr8_2:23627934-23627953 | None:intergenic | 70.0% | |
| CGGCTTCGATGAGGCGGGAC+CGG | + | chr8_2:23627932-23627951 | Msa1240800:CDS | 70.0% | |
| GCAGGCGCGCGAACATAGCG+AGG | - | chr8_2:23628694-23628713 | None:intergenic | 70.0% | |
| CGGTCCCGCCTCATCGAAGC+CGG | - | chr8_2:23627934-23627953 | None:intergenic | 70.0% | |
| CGGCTTCGATGAGGCGGGAC+CGG | + | chr8_2:23627932-23627951 | Msa1240800:CDS | 70.0% | |
| GCAGGCGCGCGAACATAGCG+AGG | - | chr8_2:23628694-23628713 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 23627269 | 23629074 | 23627269 | ID=Msa1240800;Name=Msa1240800 |
| chr8_2 | mRNA | 23627269 | 23629074 | 23627269 | ID=Msa1240800-mRNA-1;Parent=Msa1240800;Name=Msa1240800-mRNA-1;_AED=0.00;_eAED=0.00;_QI=188|1|1|1|1|1|2|108|325 |
| chr8_2 | exon | 23627269 | 23628135 | 23627269 | ID=Msa1240800-mRNA-1:exon:8414;Parent=Msa1240800-mRNA-1 |
| chr8_2 | exon | 23628668 | 23629074 | 23628668 | ID=Msa1240800-mRNA-1:exon:8415;Parent=Msa1240800-mRNA-1 |
| chr8_2 | five_prime_UTR | 23627269 | 23627456 | 23627269 | ID=Msa1240800-mRNA-1:five_prime_utr;Parent=Msa1240800-mRNA-1 |
| chr8_2 | CDS | 23627457 | 23628135 | 23627457 | ID=Msa1240800-mRNA-1:cds;Parent=Msa1240800-mRNA-1 |
| chr8_2 | CDS | 23628668 | 23628966 | 23628668 | ID=Msa1240800-mRNA-1:cds;Parent=Msa1240800-mRNA-1 |
| chr8_2 | three_prime_UTR | 23628967 | 23629074 | 23628967 | ID=Msa1240800-mRNA-1:three_prime_utr;Parent=Msa1240800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
