Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1242030 | XP_004511180.1 | 37.195 | 164 | 87 | 4 | 548 | 695 | 282 | 445 | 2.53e-19 | 104 |
| Msa1242030 | XP_004511180.1 | 50.608 | 411 | 179 | 10 | 1 | 404 | 1 | 394 | 1.24e-113 | 363 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1242030 | sp|O24606|EIN3_ARATH | 46.580 | 307 | 147 | 5 | 12 | 309 | 33 | 331 | 7.99e-84 | 280 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1242030 | A0A1S2YWS8 | 37.195 | 164 | 87 | 4 | 548 | 695 | 282 | 445 | 1.21e-19 | 104 |
| Msa1242030 | A0A1S2YWS8 | 50.608 | 411 | 179 | 10 | 1 | 404 | 1 | 394 | 5.93e-114 | 363 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1242030 | TF | EIL |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1242030 | MtrunA17_Chr5g0440591 | 46.562 | 320 | 148 | 5 | 5 | 312 | 26 | 334 | 4.49e-87 | 285 |
| Msa1242030 | MtrunA17_Chr3g0118361 | 45.171 | 321 | 150 | 5 | 6 | 314 | 30 | 336 | 3.33e-81 | 270 |
| Msa1242030 | MtrunA17_Chr2g0329151 | 41.493 | 335 | 142 | 7 | 21 | 324 | 31 | 342 | 1.50e-71 | 244 |
| Msa1242030 | MtrunA17_Chr3g0124291 | 42.803 | 264 | 130 | 5 | 26 | 278 | 30 | 283 | 3.38e-69 | 232 |
| Msa1242030 | MtrunA17_Chr8g0382561 | 46.491 | 228 | 116 | 4 | 52 | 278 | 52 | 274 | 4.92e-65 | 222 |
| Msa1242030 | MtrunA17_Chr6g0476301 | 46.058 | 241 | 121 | 4 | 73 | 313 | 1 | 232 | 1.76e-64 | 218 |
| Msa1242030 | MtrunA17_Chr6g0473191 | 45.532 | 235 | 121 | 3 | 73 | 307 | 1 | 228 | 8.08e-64 | 214 |
| Msa1242030 | MtrunA17_Chr3g0080401 | 42.748 | 262 | 130 | 7 | 73 | 327 | 1 | 249 | 1.16e-63 | 214 |
| Msa1242030 | MtrunA17_Chr6g0476291 | 45.532 | 235 | 121 | 3 | 73 | 307 | 1 | 228 | 6.80e-63 | 210 |
| Msa1242030 | MtrunA17_Chr7g0260281 | 73.333 | 120 | 32 | 0 | 62 | 181 | 1 | 120 | 1.13e-48 | 167 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1242030 | AT3G20770.1 | 46.580 | 307 | 147 | 5 | 12 | 309 | 33 | 331 | 8.13e-85 | 280 |
| Msa1242030 | AT2G27050.1 | 49.434 | 265 | 118 | 4 | 21 | 275 | 42 | 300 | 6.04e-81 | 269 |
| Msa1242030 | AT1G73730.2 | 42.006 | 319 | 151 | 7 | 21 | 319 | 19 | 323 | 2.84e-70 | 239 |
| Msa1242030 | AT1G73730.1 | 42.006 | 319 | 151 | 7 | 21 | 319 | 31 | 335 | 3.46e-70 | 239 |
| Msa1242030 | AT5G10120.1 | 48.000 | 225 | 113 | 2 | 55 | 279 | 59 | 279 | 3.64e-69 | 234 |
| Msa1242030 | AT5G65100.1 | 46.667 | 225 | 113 | 3 | 54 | 277 | 88 | 306 | 1.96e-64 | 224 |
| Msa1242030 | AT5G21120.2 | 44.318 | 264 | 128 | 6 | 55 | 308 | 94 | 348 | 9.98e-64 | 221 |
| Msa1242030 | AT5G21120.3 | 44.318 | 264 | 128 | 6 | 55 | 308 | 87 | 341 | 1.22e-63 | 220 |
| Msa1242030 | AT5G21120.1 | 44.318 | 264 | 128 | 6 | 55 | 308 | 87 | 341 | 1.22e-63 | 220 |
Find 163 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCACCTTGTGCACTTTC+TGG | 0.076552 | 8_2:+26021495 | None:intergenic |
| CAATAACCAACCAAAATATT+TGG | 0.137659 | 8_2:-26018836 | Msa1242030:CDS |
| CCTACCTCAATCTGCTAATT+TGG | 0.151109 | 8_2:-26018764 | Msa1242030:CDS |
| GGAAACAAATCCAAATATTT+TGG | 0.152639 | 8_2:+26018826 | None:intergenic |
| CCTAGCTGGGTTTCATTCTT+TGG | 0.171554 | 8_2:-26018620 | Msa1242030:CDS |
| TTGCTTCCATTTGCTGAAAA+TGG | 0.183787 | 8_2:+26018937 | None:intergenic |
| CGGTTTCATGGACACTTTCT+TGG | 0.202755 | 8_2:+26019142 | None:intergenic |
| CGGTTTCATGGACACTTTCT+TGG | 0.202755 | 8_2:+26019352 | None:intergenic |
| AACAGGTTTCCTTTAGAAAA+AGG | 0.204240 | 8_2:-26020101 | Msa1242030:intron |
| CATTGAATTTGAATATTTCT+TGG | 0.208852 | 8_2:+26021118 | None:intergenic |
| GGACTTCATTATAATGTTAA+TGG | 0.231962 | 8_2:-26021147 | Msa1242030:CDS |
| GAATATAAGCATGGGTATTA+TGG | 0.267844 | 8_2:-26021433 | Msa1242030:CDS |
| GGCCTAATAACCTTGTTTCT+TGG | 0.269096 | 8_2:+26018721 | None:intergenic |
| CTCATATATAAAATGGAAAT+TGG | 0.271711 | 8_2:-26021540 | None:intergenic |
| AGCATGTTGCTTTCATTTGC+TGG | 0.279306 | 8_2:+26019069 | None:intergenic |
| AGCATGTTGCTTTCATTTGC+TGG | 0.279306 | 8_2:+26019279 | None:intergenic |
| CAACAATGAAGAAAGAAATT+TGG | 0.285533 | 8_2:-26021469 | Msa1242030:CDS |
| TGTACGTACCTTCTTTGATT+TGG | 0.287101 | 8_2:+26021003 | None:intergenic |
| TCCACCTCATTGTGTTGATT+TGG | 0.292463 | 8_2:-26019664 | Msa1242030:CDS |
| CAATAACCAACCTCAACATT+TGG | 0.307351 | 8_2:-26019040 | Msa1242030:CDS |
| CAATAACCAACCTCAACATT+TGG | 0.307351 | 8_2:-26019250 | Msa1242030:CDS |
| CATTTGGATTTGTTTCCATT+TGG | 0.311773 | 8_2:-26018889 | Msa1242030:CDS |
| CCTTACAGAAATAATTCTTC+TGG | 0.314917 | 8_2:-26018568 | Msa1242030:CDS |
| TGGTTCCATGGACACTTTCT+TGG | 0.316457 | 8_2:+26019004 | None:intergenic |
| TGGTTCCATGGACACTTTCT+TGG | 0.316457 | 8_2:+26019214 | None:intergenic |
| AGATCATGAGGTTTCCTATA+GGG | 0.321543 | 8_2:+26019999 | None:intergenic |
| TTGCTTTCATTTGCTGGAAA+TGG | 0.328902 | 8_2:+26019075 | None:intergenic |
| TTGCTTTCATTTGCTGGAAA+TGG | 0.328902 | 8_2:+26019285 | None:intergenic |
| TGACAATCAATGTCAACATT+TGG | 0.332869 | 8_2:-26018905 | Msa1242030:CDS |
| AGAGCTAGGTACGTGGTTAC+TGG | 0.338068 | 8_2:-26018685 | Msa1242030:CDS |
| TTCTGTAAGGACAATTCATT+TGG | 0.339985 | 8_2:+26018581 | None:intergenic |
| ACCATGGTGCTTCCATTTGA+TGG | 0.342571 | 8_2:+26019417 | None:intergenic |
| CCAACCTCAACATTTGGATT+TGG | 0.342720 | 8_2:-26019034 | Msa1242030:CDS |
| CCAACCTCAACATTTGGATT+TGG | 0.342720 | 8_2:-26019244 | Msa1242030:CDS |
| TATGATGTTGATGGAAATAA+TGG | 0.343859 | 8_2:-26019723 | Msa1242030:CDS |
| CCAACCTCAATGTATGGATT+TGG | 0.345365 | 8_2:-26019172 | Msa1242030:CDS |
| CCAACCTCAATGTATGGATT+TGG | 0.345365 | 8_2:-26019382 | Msa1242030:CDS |
| CCAACCTCAATGTATGGATT+TGG | 0.345365 | 8_2:-26019520 | Msa1242030:CDS |
| TCATTATAATGTTAATGGTT+TGG | 0.351324 | 8_2:-26021142 | Msa1242030:CDS |
| CGTGCTGATGGATTTGTATA+TGG | 0.353695 | 8_2:-26021288 | Msa1242030:CDS |
| TGGTTCCATGAACACTTTCT+TGG | 0.354407 | 8_2:+26019490 | None:intergenic |
| CCAACGTCAATGTATGGATT+TGG | 0.355037 | 8_2:-26018962 | Msa1242030:CDS |
| CCAACGTCAATGTATGGATT+TGG | 0.355037 | 8_2:-26019448 | Msa1242030:CDS |
| TGAAGAATGGTGGCCGCTAT+TGG | 0.355779 | 8_2:-26020048 | Msa1242030:CDS |
| CCCTTCCAAGAAAGTGTTCA+TGG | 0.359580 | 8_2:-26019495 | Msa1242030:CDS |
| CCAAGGTCAGTGTATGGATT+TGG | 0.359607 | 8_2:-26019100 | Msa1242030:CDS |
| CCAAGGTCAGTGTATGGATT+TGG | 0.359607 | 8_2:-26019310 | Msa1242030:CDS |
| TCTTGAACATTGTCTTTGAA+TGG | 0.363036 | 8_2:+26019639 | None:intergenic |
| ACTCTTCAATACCTTGTCTA+TGG | 0.369025 | 8_2:+26021335 | None:intergenic |
| CTCCAAGAAACAAGGTTATT+AGG | 0.373520 | 8_2:-26018723 | Msa1242030:CDS |
| TATTTGGATTTGTTTCCATC+TGG | 0.385511 | 8_2:-26018820 | Msa1242030:CDS |
| CATTATAATGAAGTCCTTGT+TGG | 0.390991 | 8_2:+26021154 | None:intergenic |
| TTGGTTCCATTTCCATCAAA+TGG | 0.392196 | 8_2:-26019429 | Msa1242030:CDS |
| GTGCTTCCATTTGATGGAAA+TGG | 0.394257 | 8_2:+26019423 | None:intergenic |
| TTCCTATAGGGTGGAGGACC+TGG | 0.400683 | 8_2:+26020011 | None:intergenic |
| CTATCATGTTCATTGTTGCC+TGG | 0.400918 | 8_2:+26021378 | None:intergenic |
| CCAGAAGAATTATTTCTGTA+AGG | 0.402168 | 8_2:+26018568 | None:intergenic |
| CTACATGGAAGCAATAATAA+TGG | 0.403967 | 8_2:-26019777 | Msa1242030:CDS |
| GAACTCCTCAACACAACAAT+AGG | 0.409566 | 8_2:-26021063 | Msa1242030:CDS |
| CCTTATCATAGCCACCTAGC+TGG | 0.416024 | 8_2:-26018634 | Msa1242030:CDS |
| CTAGCTCTCCTAGTGGCAAT+TGG | 0.416291 | 8_2:+26018700 | None:intergenic |
| GAAGAATGGTGGCCGCTATT+GGG | 0.417869 | 8_2:-26020047 | Msa1242030:CDS |
| ACTCATAATTATGATGTTGA+TGG | 0.419818 | 8_2:-26019732 | Msa1242030:CDS |
| CCCCTTGGCCACCATGGTGG+TGG | 0.420832 | 8_2:+26020074 | None:intergenic |
| TAGATCATGAGGTTTCCTAT+AGG | 0.421514 | 8_2:+26019998 | None:intergenic |
| CAATAACCAACGTCAATGTA+TGG | 0.424652 | 8_2:-26018968 | Msa1242030:CDS |
| TAATAACCAACGTCAATGTA+TGG | 0.431013 | 8_2:-26019454 | Msa1242030:CDS |
| CAATAACCAACCTCAATGTA+TGG | 0.431840 | 8_2:-26019178 | Msa1242030:CDS |
| CAATAACCAACCTCAATGTA+TGG | 0.431840 | 8_2:-26019388 | Msa1242030:CDS |
| CCAAGAACACTTGCTTGAAA+AGG | 0.433559 | 8_2:+26019567 | None:intergenic |
| TTGTCATGTCTTATGACATT+TGG | 0.434470 | 8_2:-26021033 | Msa1242030:CDS |
| AAATAACCAACCTCAATGTA+TGG | 0.435118 | 8_2:-26019526 | Msa1242030:CDS |
| CCATGGACACTTTCTTGGAA+TGG | 0.437818 | 8_2:+26019009 | None:intergenic |
| CCATGGACACTTTCTTGGAA+TGG | 0.437818 | 8_2:+26019219 | None:intergenic |
| TTCCACCACCATGGTGGCCA+AGG | 0.449334 | 8_2:-26020076 | Msa1242030:CDS |
| GACCAAGTAGTTCAAGTAAT+GGG | 0.449425 | 8_2:-26019698 | Msa1242030:CDS |
| CCAGCTAGGTGGCTATGATA+AGG | 0.457593 | 8_2:+26018634 | None:intergenic |
| CACCATTCTTCATCTCCCCT+TGG | 0.458151 | 8_2:+26020059 | None:intergenic |
| TTCCCATTACTTGAACTACT+TGG | 0.458463 | 8_2:+26019696 | None:intergenic |
| CTGAAAATCTTCAACATTGG+TGG | 0.458620 | 8_2:-26021227 | Msa1242030:CDS |
| AGCTGGGTTTCATTCTTTGG+AGG | 0.464728 | 8_2:-26018617 | Msa1242030:CDS |
| ATGCACAAGTTGGTAGATCT+TGG | 0.474850 | 8_2:-26021312 | Msa1242030:CDS |
| ATCCAGGTCCTCCACCCTAT+AGG | 0.477367 | 8_2:-26020013 | Msa1242030:CDS |
| AAAGTGAAGTTTGATAGAAA+TGG | 0.479002 | 8_2:-26021198 | Msa1242030:CDS |
| CAATAACCAAGGTCAGTGTA+TGG | 0.479939 | 8_2:-26019106 | Msa1242030:CDS |
| CAATAACCAAGGTCAGTGTA+TGG | 0.479939 | 8_2:-26019316 | Msa1242030:CDS |
| GTAGATCTTGGTCGTGCTGA+TGG | 0.482508 | 8_2:-26021300 | Msa1242030:CDS |
| GTTGTAATCCAAATCAAAGA+AGG | 0.482832 | 8_2:-26021011 | Msa1242030:intron |
| TCATGGACACTTTCTTGGAA+TGG | 0.482910 | 8_2:+26019147 | None:intergenic |
| TCATGGACACTTTCTTGGAA+TGG | 0.482910 | 8_2:+26019357 | None:intergenic |
| CAGCTAGGTGGCTATGATAA+GGG | 0.488469 | 8_2:+26018635 | None:intergenic |
| CTTATCATAGCCACCTAGCT+GGG | 0.489975 | 8_2:-26018633 | Msa1242030:CDS |
| TCATCTCCCCTTGGCCACCA+TGG | 0.490729 | 8_2:+26020068 | None:intergenic |
| GGAACCAAATTAGCAGATTG+AGG | 0.500479 | 8_2:+26018760 | None:intergenic |
| AATAACAAGAGCGAAGTTAG+TGG | 0.507267 | 8_2:+26019851 | None:intergenic |
| AGATAAAATGTCTGCACAAG+AGG | 0.509456 | 8_2:-26019874 | Msa1242030:CDS |
| TGGTACTTCACTATTGCAGC+AGG | 0.513940 | 8_2:+26021174 | None:intergenic |
| TTGGGTTATCGAAAGGATCC+AGG | 0.525393 | 8_2:-26020029 | Msa1242030:CDS |
| TCCATGAACACTTTCTTGGA+AGG | 0.525416 | 8_2:+26019494 | None:intergenic |
| CCAAATCCATACATTGAGGT+TGG | 0.529172 | 8_2:+26019172 | None:intergenic |
| CCAAATCCATACATTGAGGT+TGG | 0.529172 | 8_2:+26019382 | None:intergenic |
| CCAAATCCATACATTGAGGT+TGG | 0.529172 | 8_2:+26019520 | None:intergenic |
| CCAAATCCAAATGTTGAGGT+TGG | 0.529539 | 8_2:+26019034 | None:intergenic |
| CCAAATCCAAATGTTGAGGT+TGG | 0.529539 | 8_2:+26019244 | None:intergenic |
| CCATGAACACTTTCTTGGAA+GGG | 0.530268 | 8_2:+26019495 | None:intergenic |
| TTATTATTGCTTCCATGTAG+TGG | 0.532212 | 8_2:+26019780 | None:intergenic |
| TTCAAAGACAATGTTCAAGA+AGG | 0.537403 | 8_2:-26019636 | Msa1242030:CDS |
| CATCTGAAAATCTTCAACAT+TGG | 0.541776 | 8_2:-26021230 | Msa1242030:CDS |
| CCAAATTAGCAGATTGAGGT+AGG | 0.544542 | 8_2:+26018764 | None:intergenic |
| TCAAATGAGTTACCACTACA+TGG | 0.545271 | 8_2:-26019792 | Msa1242030:CDS |
| TCCACCACCATGGTGGCCAA+GGG | 0.545349 | 8_2:-26020075 | Msa1242030:CDS |
| GAAATTTGGAGGAATATGAA+AGG | 0.546481 | 8_2:-26021455 | Msa1242030:CDS |
| CCAAATCCATACACTGACCT+TGG | 0.546654 | 8_2:+26019100 | None:intergenic |
| CCAAATCCATACACTGACCT+TGG | 0.546654 | 8_2:+26019310 | None:intergenic |
| CCATTCCAAGAAAGTGTCCA+TGG | 0.548559 | 8_2:-26019009 | Msa1242030:CDS |
| CCATTCCAAGAAAGTGTCCA+TGG | 0.548559 | 8_2:-26019219 | Msa1242030:CDS |
| CAATTGCCACTAGGAGAGCT+AGG | 0.562584 | 8_2:-26018699 | Msa1242030:CDS |
| TTGGTTATTGTTAACAACCA+TGG | 0.564781 | 8_2:+26019401 | None:intergenic |
| ATATGAAAGGAATATAAGCA+TGG | 0.566014 | 8_2:-26021442 | Msa1242030:CDS |
| GGCCAAGGGGAGATGAAGAA+TGG | 0.566706 | 8_2:-26020061 | Msa1242030:CDS |
| GGACCAAGTAGTTCAAGTAA+TGG | 0.567507 | 8_2:-26019699 | Msa1242030:CDS |
| CAATGAAGAAAGAAATTTGG+AGG | 0.568734 | 8_2:-26021466 | Msa1242030:CDS |
| TATGAAAGGAATATAAGCAT+GGG | 0.585257 | 8_2:-26021441 | Msa1242030:CDS |
| TTATTAGGCCAATTGCCACT+AGG | 0.588002 | 8_2:-26018708 | Msa1242030:CDS |
| ATTGAAGAGTATGCACAAGT+TGG | 0.591118 | 8_2:-26021322 | Msa1242030:CDS |
| GCCGCTATTGGGTTATCGAA+AGG | 0.591129 | 8_2:-26020036 | Msa1242030:CDS |
| TTCAGCAAATGGAAGCAACA+TGG | 0.595235 | 8_2:-26018932 | Msa1242030:CDS |
| AAGTGTTCTTGGAAGCTGCA+TGG | 0.597320 | 8_2:-26019556 | Msa1242030:CDS |
| GGAACCAAATCCAAATGTTG+AGG | 0.598561 | 8_2:+26019030 | None:intergenic |
| GGAACCAAATCCAAATGTTG+AGG | 0.598561 | 8_2:+26019240 | None:intergenic |
| AAATCTTCAACATTGGTGGA+AGG | 0.602303 | 8_2:-26021223 | Msa1242030:CDS |
| TCTCCCCTTGGCCACCATGG+TGG | 0.603176 | 8_2:+26020071 | None:intergenic |
| TGAGGTTTCCTATAGGGTGG+AGG | 0.603546 | 8_2:+26020005 | None:intergenic |
| CAATGTTCAAGAAGGCAACA+TGG | 0.603751 | 8_2:-26019628 | Msa1242030:CDS |
| GTGCTCCTATTGTTGTGTTG+AGG | 0.604177 | 8_2:+26021058 | None:intergenic |
| CCAAAGAATGAAACCCAGCT+AGG | 0.605751 | 8_2:+26018620 | None:intergenic |
| CCAAATCCATACATTGACGT+TGG | 0.608283 | 8_2:+26018962 | None:intergenic |
| CCAAATCCATACATTGACGT+TGG | 0.608283 | 8_2:+26019448 | None:intergenic |
| GGAACCAAATCCATACATTG+AGG | 0.608410 | 8_2:+26019168 | None:intergenic |
| GGAACCAAATCCATACATTG+AGG | 0.608410 | 8_2:+26019378 | None:intergenic |
| TCATGAGGTTTCCTATAGGG+TGG | 0.619245 | 8_2:+26020002 | None:intergenic |
| ACCAAATCAACACAATGAGG+TGG | 0.621822 | 8_2:+26019663 | None:intergenic |
| AAGTGTTCATGGAACCAACA+TGG | 0.623776 | 8_2:-26019484 | Msa1242030:CDS |
| GGAACCAAATCCATACATTG+AGG | 0.626872 | 8_2:+26019516 | None:intergenic |
| CCACCACCATGGTGGCCAAG+GGG | 0.638555 | 8_2:-26020074 | Msa1242030:CDS |
| TCCATCAAATGGAAGCACCA+TGG | 0.648218 | 8_2:-26019418 | Msa1242030:CDS |
| CACTAGGAGAGCTAGGTACG+TGG | 0.651877 | 8_2:-26018692 | Msa1242030:CDS |
| CAAAATCTATACATTGACGT+TGG | 0.654969 | 8_2:+26019592 | None:intergenic |
| TCCTTTCGATAACCCAATAG+CGG | 0.663958 | 8_2:+26020035 | None:intergenic |
| GATGTTGATGGAAATAATGG+AGG | 0.666614 | 8_2:-26019720 | Msa1242030:CDS |
| AAGTGTCCATGGAACCAACA+TGG | 0.668303 | 8_2:-26018998 | Msa1242030:CDS |
| AAGTGTCCATGGAACCAACA+TGG | 0.668303 | 8_2:-26019208 | Msa1242030:CDS |
| CAAGGGGAGATGAAGAATGG+TGG | 0.668606 | 8_2:-26020058 | Msa1242030:CDS |
| AAGAATGAAACCCAGCTAGG+TGG | 0.679661 | 8_2:+26018623 | None:intergenic |
| CACGTACCTAGCTCTCCTAG+TGG | 0.680216 | 8_2:+26018693 | None:intergenic |
| GGAACCAAATCAACACAATG+AGG | 0.681148 | 8_2:+26019660 | None:intergenic |
| TGGCTATGATAAGGGCAATG+TGG | 0.683056 | 8_2:+26018643 | None:intergenic |
| AAATCACCAGAAAGTGCACA+AGG | 0.687654 | 8_2:-26021501 | Msa1242030:CDS |
| AAGTGTCCATGAAACCGACA+TGG | 0.701399 | 8_2:-26019136 | Msa1242030:CDS |
| AAGTGTCCATGAAACCGACA+TGG | 0.701399 | 8_2:-26019346 | Msa1242030:CDS |
| ATTGAGTAACACCATAGACA+AGG | 0.713130 | 8_2:-26021346 | Msa1242030:CDS |
| GCAATAGTGAAGTACCAACA+AGG | 0.715198 | 8_2:-26021168 | Msa1242030:CDS |
| AAGGTGTTCCACCACCATGG+TGG | 0.732712 | 8_2:-26020082 | Msa1242030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGAATAATTAATTTTAGTA+CGG | + | chr8_2:26019757-26019776 | None:intergenic | 10.0% |
| !!! | TATTTTTGTGAAATTATTAC+CGG | + | chr8_2:26019191-26019210 | None:intergenic | 15.0% |
| !! | TTAAATATAATCACATATCT+AGG | - | chr8_2:26019217-26019236 | Msa1242030:CDS | 15.0% |
| !!! | ATCTAAAATCTTAAAACATT+TGG | + | chr8_2:26019542-26019561 | None:intergenic | 15.0% |
| !!! | TAAGATTTTAGATAAAAATG+TGG | - | chr8_2:26019549-26019568 | Msa1242030:CDS | 15.0% |
| !!! | TGTTTTTTGTATTTTGAAAT+TGG | - | chr8_2:26019935-26019954 | Msa1242030:CDS | 15.0% |
| !! | TATGGAATTATTCCAAAAAA+TGG | - | chr8_2:26018819-26018838 | Msa1242030:CDS | 20.0% |
| !! | TCATTATAATGTTAATGGTT+TGG | - | chr8_2:26018947-26018966 | Msa1242030:CDS | 20.0% |
| !! | CATTGAATTTGAATATTTCT+TGG | + | chr8_2:26018974-26018993 | None:intergenic | 20.0% |
| !!! | TCTAATTTTGCATCTAATAA+GGG | + | chr8_2:26019484-26019503 | None:intergenic | 20.0% |
| !!! | TTCTAATTTTGCATCTAATA+AGG | + | chr8_2:26019485-26019504 | None:intergenic | 20.0% |
| !! | TGTGTGTCTATATATATATT+GGG | - | chr8_2:26019666-26019685 | Msa1242030:CDS | 20.0% |
| !!! | AGATTCTCATTATTTTGAAA+TGG | - | chr8_2:26019701-26019720 | Msa1242030:CDS | 20.0% |
| !!! | GATTCTCATTATTTTGAAAT+GGG | - | chr8_2:26019702-26019721 | Msa1242030:CDS | 20.0% |
| !!! | TCCTTATTTTACTAAAATCA+GGG | + | chr8_2:26020167-26020186 | None:intergenic | 20.0% |
| ! | CAACAATGAAGAAAGAAATT+TGG | - | chr8_2:26018620-26018639 | Msa1242030:CDS | 25.0% |
| ! | ATATGAAAGGAATATAAGCA+TGG | - | chr8_2:26018647-26018666 | Msa1242030:CDS | 25.0% |
| ! | TATGAAAGGAATATAAGCAT+GGG | - | chr8_2:26018648-26018667 | Msa1242030:CDS | 25.0% |
| ! | AAAGTGAAGTTTGATAGAAA+TGG | - | chr8_2:26018891-26018910 | Msa1242030:CDS | 25.0% |
| ! | GGACTTCATTATAATGTTAA+TGG | - | chr8_2:26018942-26018961 | Msa1242030:CDS | 25.0% |
| ! | TACATGAATTCGTTACTAAT+AGG | - | chr8_2:26019355-26019374 | Msa1242030:CDS | 25.0% |
| ! | AGAAGTTGAGCAATATATAA+AGG | - | chr8_2:26019501-26019520 | Msa1242030:CDS | 25.0% |
| ! | GTGTGTGTCTATATATATAT+TGG | - | chr8_2:26019665-26019684 | Msa1242030:CDS | 25.0% |
| ! | TATTCAATTAACAATCGAAG+TGG | - | chr8_2:26019770-26019789 | Msa1242030:CDS | 25.0% |
| ! | ATTCAATTAACAATCGAAGT+GGG | - | chr8_2:26019771-26019790 | Msa1242030:CDS | 25.0% |
| ! | ATTTGTCTAATCAATGACAT+TGG | - | chr8_2:26019837-26019856 | Msa1242030:CDS | 25.0% |
| !!! | TTTTCGTATTTTGTTTCCTT+TGG | - | chr8_2:26019900-26019919 | Msa1242030:CDS | 25.0% |
| !!! | CCTTATTTTACTAAAATCAG+GGG | + | chr8_2:26020166-26020185 | None:intergenic | 25.0% |
| !!! | CTCCTTATTTTACTAAAATC+AGG | + | chr8_2:26020168-26020187 | None:intergenic | 25.0% |
| !! | CATTTTATCTTGAAGATTCT+TGG | + | chr8_2:26020205-26020224 | None:intergenic | 25.0% |
| ! | ACTCATAATTATGATGTTGA+TGG | - | chr8_2:26020357-26020376 | Msa1242030:intron | 25.0% |
| !! | TATGATGTTGATGGAAATAA+TGG | - | chr8_2:26020366-26020385 | Msa1242030:intron | 25.0% |
| ! | GTTATTACTAAAAACCATGT+TGG | + | chr8_2:26020622-26020641 | None:intergenic | 25.0% |
| ! | GTTATTGTTAAAAACCATGT+CGG | + | chr8_2:26020760-26020779 | None:intergenic | 25.0% |
| !! | ATGGTTTTTAACAATAACCA+AGG | - | chr8_2:26020762-26020781 | Msa1242030:intron | 25.0% |
| ! | GTTATTGTTAAAAACCATGT+TGG | + | chr8_2:26020760-26020779 | None:intergenic | 25.0% |
| ! | GTTATTGTTAAAAACCATGT+CGG | + | chr8_2:26020760-26020779 | None:intergenic | 25.0% |
| !! | ATGGTTTTTAACAATAACCA+AGG | - | chr8_2:26020762-26020781 | Msa1242030:intron | 25.0% |
| ! | GTTATTGTTAAAAACCATGT+TGG | + | chr8_2:26020760-26020779 | None:intergenic | 25.0% |
| !!! | CCTTCAATTTTTTTTCCAAA+TGG | + | chr8_2:26021218-26021237 | None:intergenic | 25.0% |
| ! | CCATTTGGAAAAAAAATTGA+AGG | - | chr8_2:26021215-26021234 | Msa1242030:CDS | 25.0% |
| ! | CAATAACCAACCAAAATATT+TGG | - | chr8_2:26021253-26021272 | Msa1242030:CDS | 25.0% |
| !!! | ACAAATCCAAATATTTTGGT+TGG | + | chr8_2:26021262-26021281 | None:intergenic | 25.0% |
| !! | GGAAACAAATCCAAATATTT+TGG | + | chr8_2:26021266-26021285 | None:intergenic | 25.0% |
| CAATGAAGAAAGAAATTTGG+AGG | - | chr8_2:26018623-26018642 | Msa1242030:CDS | 30.0% | |
| GAAATTTGGAGGAATATGAA+AGG | - | chr8_2:26018634-26018653 | Msa1242030:CDS | 30.0% | |
| GAATATAAGCATGGGTATTA+TGG | - | chr8_2:26018656-26018675 | Msa1242030:CDS | 30.0% | |
| GGAATTGAAAAATCTTCGTA+AGG | - | chr8_2:26018677-26018696 | Msa1242030:CDS | 30.0% | |
| !!! | CTTATCGGTTTTCCATTTTT+TGG | + | chr8_2:26018834-26018853 | None:intergenic | 30.0% |
| CATCTGAAAATCTTCAACAT+TGG | - | chr8_2:26018859-26018878 | Msa1242030:CDS | 30.0% | |
| CATTATAATGAAGTCCTTGT+TGG | + | chr8_2:26018938-26018957 | None:intergenic | 30.0% | |
| TTGTCATGTCTTATGACATT+TGG | - | chr8_2:26019056-26019075 | Msa1242030:CDS | 30.0% | |
| GTTGTAATCCAAATCAAAGA+AGG | - | chr8_2:26019078-26019097 | Msa1242030:CDS | 30.0% | |
| ATAAACGTTAGTGTCATGTT+TGG | + | chr8_2:26019159-26019178 | None:intergenic | 30.0% | |
| ATATATCATACACGAGTCAT+GGG | + | chr8_2:26019416-26019435 | None:intergenic | 30.0% | |
| ! | TCAAGGACTGTTGTTTATAT+AGG | - | chr8_2:26019435-26019454 | Msa1242030:CDS | 30.0% |
| GGTGTTAAAACTCAATTGTA+TGG | - | chr8_2:26019570-26019589 | Msa1242030:CDS | 30.0% | |
| CATTACAGATTCATCACAAT+GGG | + | chr8_2:26019606-26019625 | None:intergenic | 30.0% | |
| ACATTACAGATTCATCACAA+TGG | + | chr8_2:26019607-26019626 | None:intergenic | 30.0% | |
| ! | ACACACATAGACACATTTTT+GGG | + | chr8_2:26019649-26019668 | None:intergenic | 30.0% |
| AACACGTTTATATTGTCCAA+AGG | + | chr8_2:26019919-26019938 | None:intergenic | 30.0% | |
| ! | TAAACCGTAACATTTTGAAC+AGG | - | chr8_2:26019971-26019990 | Msa1242030:CDS | 30.0% |
| GAAACCTGTTCAAAATGTTA+CGG | + | chr8_2:26019978-26019997 | None:intergenic | 30.0% | |
| ! | AACAGGTTTCCTTTAGAAAA+AGG | - | chr8_2:26019988-26020007 | Msa1242030:CDS | 30.0% |
| GAAACCTCATGATCTAAAAA+AGG | - | chr8_2:26020098-26020117 | Msa1242030:CDS | 30.0% | |
| !!! | CAATCCTTTTTTAGATCATG+AGG | + | chr8_2:26020105-26020124 | None:intergenic | 30.0% |
| CTCATGATCTAAAAAAGGAT+TGG | - | chr8_2:26020103-26020122 | Msa1242030:intron | 30.0% | |
| !! | CCCCTGATTTTAGTAAAATA+AGG | - | chr8_2:26020163-26020182 | Msa1242030:intron | 30.0% |
| TTATTATTGCTTCCATGTAG+TGG | + | chr8_2:26020312-26020331 | None:intergenic | 30.0% | |
| CTACATGGAAGCAATAATAA+TGG | - | chr8_2:26020312-26020331 | Msa1242030:intron | 30.0% | |
| TCTTGAACATTGTCTTTGAA+TGG | + | chr8_2:26020453-26020472 | None:intergenic | 30.0% | |
| TTCAAAGACAATGTTCAAGA+AGG | - | chr8_2:26020453-26020472 | Msa1242030:intron | 30.0% | |
| CAAAATCTATACATTGACGT+TGG | + | chr8_2:26020500-26020519 | None:intergenic | 30.0% | |
| AAATAACCAACCTCAATGTA+TGG | - | chr8_2:26020563-26020582 | Msa1242030:intron | 30.0% | |
| TAATAACCAACGTCAATGTA+TGG | - | chr8_2:26020635-26020654 | Msa1242030:intron | 30.0% | |
| TTGGTTATTGTTAACAACCA+TGG | + | chr8_2:26020691-26020710 | None:intergenic | 30.0% | |
| TGACAATCAATGTCAACATT+TGG | - | chr8_2:26021184-26021203 | Msa1242030:CDS | 30.0% | |
| ! | CATTTGGATTTGTTTCCATT+TGG | - | chr8_2:26021200-26021219 | Msa1242030:CDS | 30.0% |
| ! | TATTTGGATTTGTTTCCATC+TGG | - | chr8_2:26021269-26021288 | Msa1242030:CDS | 30.0% |
| !!! | CTTGGAGCATTTTTTTCATT+AGG | + | chr8_2:26021353-26021372 | None:intergenic | 30.0% |
| AAAAAATGCTCCAAGAAACA+AGG | - | chr8_2:26021358-26021377 | Msa1242030:CDS | 30.0% | |
| TTCTGTAAGGACAATTCATT+TGG | + | chr8_2:26021511-26021530 | None:intergenic | 30.0% | |
| !! | CCAGAAGAATTATTTCTGTA+AGG | + | chr8_2:26021524-26021543 | None:intergenic | 30.0% |
| CCTTACAGAAATAATTCTTC+TGG | - | chr8_2:26021521-26021540 | Msa1242030:CDS | 30.0% | |
| CGTAAGGAAGTAAAAAATCC+AGG | - | chr8_2:26018693-26018712 | Msa1242030:CDS | 35.0% | |
| ATTGAGTAACACCATAGACA+AGG | - | chr8_2:26018743-26018762 | Msa1242030:CDS | 35.0% | |
| ACTCTTCAATACCTTGTCTA+TGG | + | chr8_2:26018757-26018776 | None:intergenic | 35.0% | |
| ! | ATTGAAGAGTATGCACAAGT+TGG | - | chr8_2:26018767-26018786 | Msa1242030:CDS | 35.0% |
| ! | TTTTCAGATGCAGCACTTAT+CGG | + | chr8_2:26018849-26018868 | None:intergenic | 35.0% |
| CTGAAAATCTTCAACATTGG+TGG | - | chr8_2:26018862-26018881 | Msa1242030:CDS | 35.0% | |
| AAATCTTCAACATTGGTGGA+AGG | - | chr8_2:26018866-26018885 | Msa1242030:CDS | 35.0% | |
| TGTACGTACCTTCTTTGATT+TGG | + | chr8_2:26019089-26019108 | None:intergenic | 35.0% | |
| !! | ACATATCTAGGTGTCATTTG+AGG | - | chr8_2:26019229-26019248 | Msa1242030:CDS | 35.0% |
| !! | TATAGCATCGACATCTTTGA+TGG | + | chr8_2:26019275-26019294 | None:intergenic | 35.0% |
| GATATATCATACACGAGTCA+TGG | + | chr8_2:26019417-26019436 | None:intergenic | 35.0% | |
| GACTCGTGTATGATATATCA+AGG | - | chr8_2:26019418-26019437 | Msa1242030:CDS | 35.0% | |
| !! | ATTCATCACAATGGGTTAAG+AGG | + | chr8_2:26019598-26019617 | None:intergenic | 35.0% |
| !!! | CACATTTTTGGGACTTCTAA+GGG | + | chr8_2:26019638-26019657 | None:intergenic | 35.0% |
| !!! | ACACATTTTTGGGACTTCTA+AGG | + | chr8_2:26019639-26019658 | None:intergenic | 35.0% |
| ! | CACACACATAGACACATTTT+TGG | + | chr8_2:26019650-26019669 | None:intergenic | 35.0% |
| AGATCATGAGGTTTCCTATA+GGG | + | chr8_2:26020093-26020112 | None:intergenic | 35.0% | |
| TAGATCATGAGGTTTCCTAT+AGG | + | chr8_2:26020094-26020113 | None:intergenic | 35.0% | |
| AGATAAAATGTCTGCACAAG+AGG | - | chr8_2:26020215-26020234 | Msa1242030:intron | 35.0% | |
| AATAACAAGAGCGAAGTTAG+TGG | + | chr8_2:26020241-26020260 | None:intergenic | 35.0% | |
| TCAAATGAGTTACCACTACA+TGG | - | chr8_2:26020297-26020316 | Msa1242030:intron | 35.0% | |
| ! | GATGTTGATGGAAATAATGG+AGG | - | chr8_2:26020369-26020388 | Msa1242030:intron | 35.0% |
| GACCAAGTAGTTCAAGTAAT+GGG | - | chr8_2:26020391-26020410 | Msa1242030:intron | 35.0% | |
| TTCCCATTACTTGAACTACT+TGG | + | chr8_2:26020396-26020415 | None:intergenic | 35.0% | |
| TTGGTTCCATTTCCATCAAA+TGG | - | chr8_2:26020660-26020679 | Msa1242030:intron | 35.0% | |
| CAATAACCAACCTCAATGTA+TGG | - | chr8_2:26020701-26020720 | Msa1242030:intron | 35.0% | |
| !! | TAAAAACCATGTCGGTTTCA+TGG | + | chr8_2:26020752-26020771 | None:intergenic | 35.0% |
| ! | TTGCTTTCATTTGCTGGAAA+TGG | + | chr8_2:26020807-26020826 | None:intergenic | 35.0% |
| CAATAACCAACCTCAACATT+TGG | - | chr8_2:26020839-26020858 | Msa1242030:intron | 35.0% | |
| !! | TAAAAACCATGTTGGTTCCA+TGG | + | chr8_2:26020614-26020633 | None:intergenic | 35.0% |
| CAATAACCAACCTCAATGTA+TGG | - | chr8_2:26020701-26020720 | Msa1242030:intron | 35.0% | |
| !! | TAAAAACCATGTCGGTTTCA+TGG | + | chr8_2:26020752-26020771 | None:intergenic | 35.0% |
| ! | TTGCTTTCATTTGCTGGAAA+TGG | + | chr8_2:26020807-26020826 | None:intergenic | 35.0% |
| CAATAACCAACCTCAACATT+TGG | - | chr8_2:26020839-26020858 | Msa1242030:intron | 35.0% | |
| !! | TAAAAACCATGTTGGTTCCA+TGG | + | chr8_2:26020614-26020633 | None:intergenic | 35.0% |
| CAATAACCAACGTCAATGTA+TGG | - | chr8_2:26021121-26021140 | Msa1242030:CDS | 35.0% | |
| ! | TTGGTTCCATTTTCAGCAAA+TGG | - | chr8_2:26021146-26021165 | Msa1242030:CDS | 35.0% |
| ! | TTGCTTCCATTTGCTGAAAA+TGG | + | chr8_2:26021155-26021174 | None:intergenic | 35.0% |
| !!! | CCTTGAACATTTTTTCCAGA+TGG | + | chr8_2:26021287-26021306 | None:intergenic | 35.0% |
| CCATCTGGAAAAAATGTTCA+AGG | - | chr8_2:26021284-26021303 | Msa1242030:CDS | 35.0% | |
| CTCCAAGAAACAAGGTTATT+AGG | - | chr8_2:26021366-26021385 | Msa1242030:CDS | 35.0% | |
| ! | AAATCACCAGAAAGTGCACA+AGG | - | chr8_2:26018588-26018607 | Msa1242030:CDS | 40.0% |
| CTATCATGTTCATTGTTGCC+TGG | + | chr8_2:26018714-26018733 | None:intergenic | 40.0% | |
| !! | ATGCACAAGTTGGTAGATCT+TGG | - | chr8_2:26018777-26018796 | Msa1242030:CDS | 40.0% |
| !! | CGTGCTGATGGATTTGTATA+TGG | - | chr8_2:26018801-26018820 | Msa1242030:CDS | 40.0% |
| ! | GCAATAGTGAAGTACCAACA+AGG | - | chr8_2:26018921-26018940 | Msa1242030:CDS | 40.0% |
| GAACTCCTCAACACAACAAT+AGG | - | chr8_2:26019026-26019045 | Msa1242030:CDS | 40.0% | |
| TAACGTTTATGCTTCGACAC+CGG | - | chr8_2:26019169-26019188 | Msa1242030:CDS | 40.0% | |
| TCCCAAAACACAGAGAGAAA+TGG | - | chr8_2:26019380-26019399 | Msa1242030:CDS | 40.0% | |
| ! | CCCATTTCTCTCTGTGTTTT+GGG | + | chr8_2:26019384-26019403 | None:intergenic | 40.0% |
| CCCAAAACACAGAGAGAAAT+GGG | - | chr8_2:26019381-26019400 | Msa1242030:CDS | 40.0% | |
| ! | ACCCATTTCTCTCTGTGTTT+TGG | + | chr8_2:26019385-26019404 | None:intergenic | 40.0% |
| ! | GGTGGAACACCTTTTTCTAA+AGG | + | chr8_2:26020000-26020019 | None:intergenic | 40.0% |
| TCCTTTCGATAACCCAATAG+CGG | + | chr8_2:26020057-26020076 | None:intergenic | 40.0% | |
| GGACCAAGTAGTTCAAGTAA+TGG | - | chr8_2:26020390-26020409 | Msa1242030:intron | 40.0% | |
| !! | TCCACCTCATTGTGTTGATT+TGG | - | chr8_2:26020425-26020444 | Msa1242030:intron | 40.0% |
| ACCAAATCAACACAATGAGG+TGG | + | chr8_2:26020429-26020448 | None:intergenic | 40.0% | |
| GGAACCAAATCAACACAATG+AGG | + | chr8_2:26020432-26020451 | None:intergenic | 40.0% | |
| CAATGTTCAAGAAGGCAACA+TGG | - | chr8_2:26020461-26020480 | Msa1242030:intron | 40.0% | |
| CCAAGAACACTTGCTTGAAA+AGG | + | chr8_2:26020525-26020544 | None:intergenic | 40.0% | |
| !! | CCTTTTCAAGCAAGTGTTCT+TGG | - | chr8_2:26020522-26020541 | Msa1242030:intron | 40.0% |
| CCAAATCCATACATTGAGGT+TGG | + | chr8_2:26020572-26020591 | None:intergenic | 40.0% | |
| CCAACCTCAATGTATGGATT+TGG | - | chr8_2:26020569-26020588 | Msa1242030:intron | 40.0% | |
| GGAACCAAATCCATACATTG+AGG | + | chr8_2:26020576-26020595 | None:intergenic | 40.0% | |
| CCATGAACACTTTCTTGGAA+GGG | + | chr8_2:26020597-26020616 | None:intergenic | 40.0% | |
| TCCATGAACACTTTCTTGGA+AGG | + | chr8_2:26020598-26020617 | None:intergenic | 40.0% | |
| TGGTTCCATGAACACTTTCT+TGG | + | chr8_2:26020602-26020621 | None:intergenic | 40.0% | |
| AAGTGTTCATGGAACCAACA+TGG | - | chr8_2:26020605-26020624 | Msa1242030:intron | 40.0% | |
| CCAAATCCATACATTGACGT+TGG | + | chr8_2:26020644-26020663 | None:intergenic | 40.0% | |
| CCAACGTCAATGTATGGATT+TGG | - | chr8_2:26020641-26020660 | Msa1242030:intron | 40.0% | |
| GTGCTTCCATTTGATGGAAA+TGG | + | chr8_2:26020669-26020688 | None:intergenic | 40.0% | |
| CCAAATCCATACATTGAGGT+TGG | + | chr8_2:26020572-26020591 | None:intergenic | 40.0% | |
| CCAACCTCAATGTATGGATT+TGG | - | chr8_2:26020569-26020588 | Msa1242030:intron | 40.0% | |
| GGAACCAAATCCATACATTG+AGG | + | chr8_2:26020576-26020595 | None:intergenic | 40.0% | |
| TCATGGACACTTTCTTGGAA+TGG | + | chr8_2:26020735-26020754 | None:intergenic | 40.0% | |
| CAATAACCAAGGTCAGTGTA+TGG | - | chr8_2:26020773-26020792 | Msa1242030:intron | 40.0% | |
| !! | AGCATGTTGCTTTCATTTGC+TGG | + | chr8_2:26020813-26020832 | None:intergenic | 40.0% |
| CCAAATCCAAATGTTGAGGT+TGG | + | chr8_2:26020848-26020867 | None:intergenic | 40.0% | |
| CCAACCTCAACATTTGGATT+TGG | - | chr8_2:26020845-26020864 | Msa1242030:intron | 40.0% | |
| GGAACCAAATCCAAATGTTG+AGG | + | chr8_2:26020852-26020871 | None:intergenic | 40.0% | |
| CCAAATCCATACATTGAGGT+TGG | + | chr8_2:26020572-26020591 | None:intergenic | 40.0% | |
| CCAACCTCAATGTATGGATT+TGG | - | chr8_2:26020569-26020588 | Msa1242030:intron | 40.0% | |
| GGAACCAAATCCATACATTG+AGG | + | chr8_2:26020576-26020595 | None:intergenic | 40.0% | |
| TCATGGACACTTTCTTGGAA+TGG | + | chr8_2:26020735-26020754 | None:intergenic | 40.0% | |
| CAATAACCAAGGTCAGTGTA+TGG | - | chr8_2:26020773-26020792 | Msa1242030:intron | 40.0% | |
| !! | AGCATGTTGCTTTCATTTGC+TGG | + | chr8_2:26020813-26020832 | None:intergenic | 40.0% |
| CCAAATCCAAATGTTGAGGT+TGG | + | chr8_2:26020848-26020867 | None:intergenic | 40.0% | |
| CCAACCTCAACATTTGGATT+TGG | - | chr8_2:26020845-26020864 | Msa1242030:intron | 40.0% | |
| GGAACCAAATCCAAATGTTG+AGG | + | chr8_2:26020852-26020871 | None:intergenic | 40.0% | |
| CCAAATCCATACATTGACGT+TGG | + | chr8_2:26020644-26020663 | None:intergenic | 40.0% | |
| CCAACGTCAATGTATGGATT+TGG | - | chr8_2:26020641-26020660 | Msa1242030:intron | 40.0% | |
| TTCAGCAAATGGAAGCAACA+TGG | - | chr8_2:26021157-26021176 | Msa1242030:CDS | 40.0% | |
| CCAAATTAGCAGATTGAGGT+AGG | + | chr8_2:26021328-26021347 | None:intergenic | 40.0% | |
| CCTACCTCAATCTGCTAATT+TGG | - | chr8_2:26021325-26021344 | Msa1242030:CDS | 40.0% | |
| GGAACCAAATTAGCAGATTG+AGG | + | chr8_2:26021332-26021351 | None:intergenic | 40.0% | |
| ! | GGCCTAATAACCTTGTTTCT+TGG | + | chr8_2:26021371-26021390 | None:intergenic | 40.0% |
| TTATTAGGCCAATTGCCACT+AGG | - | chr8_2:26021381-26021400 | Msa1242030:CDS | 40.0% | |
| TCTTCACCTTGTGCACTTTC+TGG | + | chr8_2:26018597-26018616 | None:intergenic | 45.0% | |
| TGGTACTTCACTATTGCAGC+AGG | + | chr8_2:26018918-26018937 | None:intergenic | 45.0% | |
| GTGCTCCTATTGTTGTGTTG+AGG | + | chr8_2:26019034-26019053 | None:intergenic | 45.0% | |
| !! | TCTTTGATGGAAGGAGTGTC+TGG | + | chr8_2:26019262-26019281 | None:intergenic | 45.0% |
| ! | GCATCGACATCTTTGATGGA+AGG | + | chr8_2:26019271-26019290 | None:intergenic | 45.0% |
| !! | AAAAAGGTGTTCCACCACCA+TGG | - | chr8_2:26020004-26020023 | Msa1242030:CDS | 45.0% |
| TTGGGTTATCGAAAGGATCC+AGG | - | chr8_2:26020060-26020079 | Msa1242030:CDS | 45.0% | |
| TCATGAGGTTTCCTATAGGG+TGG | + | chr8_2:26020090-26020109 | None:intergenic | 45.0% | |
| AAGTGTTCTTGGAAGCTGCA+TGG | - | chr8_2:26020533-26020552 | Msa1242030:intron | 45.0% | |
| !! | CCCTTCCAAGAAAGTGTTCA+TGG | - | chr8_2:26020594-26020613 | Msa1242030:intron | 45.0% |
| !! | TCCATCAAATGGAAGCACCA+TGG | - | chr8_2:26020671-26020690 | Msa1242030:intron | 45.0% |
| ACCATGGTGCTTCCATTTGA+TGG | + | chr8_2:26020675-26020694 | None:intergenic | 45.0% | |
| CGGTTTCATGGACACTTTCT+TGG | + | chr8_2:26020740-26020759 | None:intergenic | 45.0% | |
| AAGTGTCCATGAAACCGACA+TGG | - | chr8_2:26020743-26020762 | Msa1242030:intron | 45.0% | |
| CCAAATCCATACACTGACCT+TGG | + | chr8_2:26020782-26020801 | None:intergenic | 45.0% | |
| CCAAGGTCAGTGTATGGATT+TGG | - | chr8_2:26020779-26020798 | Msa1242030:intron | 45.0% | |
| CCATGGACACTTTCTTGGAA+TGG | + | chr8_2:26020873-26020892 | None:intergenic | 45.0% | |
| !! | CCATTCCAAGAAAGTGTCCA+TGG | - | chr8_2:26020732-26020751 | Msa1242030:intron | 45.0% |
| TGGTTCCATGGACACTTTCT+TGG | + | chr8_2:26020878-26020897 | None:intergenic | 45.0% | |
| AAGTGTCCATGGAACCAACA+TGG | - | chr8_2:26020881-26020900 | Msa1242030:intron | 45.0% | |
| CGGTTTCATGGACACTTTCT+TGG | + | chr8_2:26020740-26020759 | None:intergenic | 45.0% | |
| AAGTGTCCATGAAACCGACA+TGG | - | chr8_2:26020743-26020762 | Msa1242030:intron | 45.0% | |
| CCAAATCCATACACTGACCT+TGG | + | chr8_2:26020782-26020801 | None:intergenic | 45.0% | |
| CCAAGGTCAGTGTATGGATT+TGG | - | chr8_2:26020779-26020798 | Msa1242030:intron | 45.0% | |
| CCATGGACACTTTCTTGGAA+TGG | + | chr8_2:26020873-26020892 | None:intergenic | 45.0% | |
| !! | CCATTCCAAGAAAGTGTCCA+TGG | - | chr8_2:26020732-26020751 | Msa1242030:intron | 45.0% |
| TGGTTCCATGGACACTTTCT+TGG | + | chr8_2:26020878-26020897 | None:intergenic | 45.0% | |
| AAGTGTCCATGGAACCAACA+TGG | - | chr8_2:26020881-26020900 | Msa1242030:intron | 45.0% | |
| TGGCTATGATAAGGGCAATG+TGG | + | chr8_2:26021449-26021468 | None:intergenic | 45.0% | |
| CAGCTAGGTGGCTATGATAA+GGG | + | chr8_2:26021457-26021476 | None:intergenic | 45.0% | |
| CTTATCATAGCCACCTAGCT+GGG | - | chr8_2:26021456-26021475 | Msa1242030:CDS | 45.0% | |
| AAGAATGAAACCCAGCTAGG+TGG | + | chr8_2:26021469-26021488 | None:intergenic | 45.0% | |
| CCAAAGAATGAAACCCAGCT+AGG | + | chr8_2:26021472-26021491 | None:intergenic | 45.0% | |
| CCTAGCTGGGTTTCATTCTT+TGG | - | chr8_2:26021469-26021488 | Msa1242030:CDS | 45.0% | |
| AGCTGGGTTTCATTCTTTGG+AGG | - | chr8_2:26021472-26021491 | Msa1242030:CDS | 45.0% | |
| GTAGATCTTGGTCGTGCTGA+TGG | - | chr8_2:26018789-26018808 | Msa1242030:CDS | 50.0% | |
| CACCATTCTTCATCTCCCCT+TGG | + | chr8_2:26020033-26020052 | None:intergenic | 50.0% | |
| CAAGGGGAGATGAAGAATGG+TGG | - | chr8_2:26020031-26020050 | Msa1242030:CDS | 50.0% | |
| TGAAGAATGGTGGCCGCTAT+TGG | - | chr8_2:26020041-26020060 | Msa1242030:CDS | 50.0% | |
| GAAGAATGGTGGCCGCTATT+GGG | - | chr8_2:26020042-26020061 | Msa1242030:CDS | 50.0% | |
| GCCGCTATTGGGTTATCGAA+AGG | - | chr8_2:26020053-26020072 | Msa1242030:CDS | 50.0% | |
| TGAGGTTTCCTATAGGGTGG+AGG | + | chr8_2:26020087-26020106 | None:intergenic | 50.0% | |
| ! | CTAGCTCTCCTAGTGGCAAT+TGG | + | chr8_2:26021392-26021411 | None:intergenic | 50.0% |
| CAATTGCCACTAGGAGAGCT+AGG | - | chr8_2:26021390-26021409 | Msa1242030:CDS | 50.0% | |
| AGAGCTAGGTACGTGGTTAC+TGG | - | chr8_2:26021404-26021423 | Msa1242030:CDS | 50.0% | |
| CCAGCTAGGTGGCTATGATA+AGG | + | chr8_2:26021458-26021477 | None:intergenic | 50.0% | |
| CCTTATCATAGCCACCTAGC+TGG | - | chr8_2:26021455-26021474 | Msa1242030:CDS | 50.0% | |
| ! | AAGGTGTTCCACCACCATGG+TGG | - | chr8_2:26020007-26020026 | Msa1242030:CDS | 55.0% |
| GGCCAAGGGGAGATGAAGAA+TGG | - | chr8_2:26020028-26020047 | Msa1242030:CDS | 55.0% | |
| ATCCAGGTCCTCCACCCTAT+AGG | - | chr8_2:26020076-26020095 | Msa1242030:CDS | 55.0% | |
| TTCCTATAGGGTGGAGGACC+TGG | + | chr8_2:26020081-26020100 | None:intergenic | 55.0% | |
| ! | CACGTACCTAGCTCTCCTAG+TGG | + | chr8_2:26021399-26021418 | None:intergenic | 55.0% |
| CACTAGGAGAGCTAGGTACG+TGG | - | chr8_2:26021397-26021416 | Msa1242030:CDS | 55.0% | |
| TTCCACCACCATGGTGGCCA+AGG | - | chr8_2:26020013-26020032 | Msa1242030:CDS | 60.0% | |
| TCCACCACCATGGTGGCCAA+GGG | - | chr8_2:26020014-26020033 | Msa1242030:CDS | 60.0% | |
| TCATCTCCCCTTGGCCACCA+TGG | + | chr8_2:26020024-26020043 | None:intergenic | 60.0% | |
| CCACCACCATGGTGGCCAAG+GGG | - | chr8_2:26020015-26020034 | Msa1242030:CDS | 65.0% | |
| TCTCCCCTTGGCCACCATGG+TGG | + | chr8_2:26020021-26020040 | None:intergenic | 65.0% | |
| CCCCTTGGCCACCATGGTGG+TGG | + | chr8_2:26020018-26020037 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 26018561 | 26021550 | 26018561 | ID=Msa1242030;Name=Msa1242030 |
| chr8_2 | mRNA | 26018561 | 26021550 | 26018561 | ID=Msa1242030-mRNA-1;Parent=Msa1242030;Name=Msa1242030-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0|0|1|1|1|2|0|698 |
| chr8_2 | exon | 26021012 | 26021550 | 26021012 | ID=Msa1242030-mRNA-1:exon:9215;Parent=Msa1242030-mRNA-1 |
| chr8_2 | exon | 26018561 | 26020118 | 26018561 | ID=Msa1242030-mRNA-1:exon:9214;Parent=Msa1242030-mRNA-1 |
| chr8_2 | CDS | 26021012 | 26021550 | 26021012 | ID=Msa1242030-mRNA-1:cds;Parent=Msa1242030-mRNA-1 |
| chr8_2 | CDS | 26018561 | 26020118 | 26018561 | ID=Msa1242030-mRNA-1:cds;Parent=Msa1242030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
