Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1243070 | RHN42830.1 | 39.934 | 303 | 116 | 3 | 179 | 415 | 97 | 399 | 1.14e-60 | 218 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1243070 | A0A396GP51 | 39.934 | 303 | 116 | 3 | 179 | 415 | 97 | 399 | 5.46e-61 | 218 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1243070 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1243070 | MtrunA17_Chr8g0381211 | 39.934 | 303 | 116 | 3 | 179 | 415 | 97 | 399 | 1.05e-64 | 218 |
| Msa1243070 | MtrunA17_Chr8g0352741 | 37.662 | 308 | 124 | 2 | 214 | 453 | 12 | 319 | 3.15e-60 | 201 |
| Msa1243070 | MtrunA17_Chr8g0341191 | 39.157 | 332 | 133 | 4 | 179 | 442 | 486 | 816 | 3.21e-56 | 201 |
| Msa1243070 | MtrunA17_Chr5g0423411 | 36.901 | 355 | 157 | 2 | 167 | 454 | 148 | 502 | 1.92e-53 | 188 |
| Msa1243070 | MtrunA17_Chr1g0171261 | 42.925 | 212 | 86 | 2 | 219 | 395 | 45 | 256 | 5.36e-46 | 162 |
| Msa1243070 | MtrunA17_Chr8g0354181 | 40.693 | 231 | 70 | 2 | 291 | 454 | 8 | 238 | 2.14e-44 | 158 |
| Msa1243070 | MtrunA17_Chr4g0075191 | 35.379 | 277 | 126 | 2 | 179 | 455 | 457 | 680 | 1.00e-39 | 152 |
| Msa1243070 | MtrunA17_Chr4g0058441 | 34.936 | 312 | 134 | 6 | 179 | 455 | 171 | 448 | 8.20e-39 | 147 |
| Msa1243070 | MtrunA17_Chr3g0139931 | 37.915 | 211 | 97 | 1 | 224 | 400 | 3 | 213 | 1.72e-38 | 142 |
| Msa1243070 | MtrunA17_Chr8g0352271 | 43.750 | 208 | 80 | 4 | 224 | 395 | 3 | 209 | 3.67e-36 | 133 |
| Msa1243070 | MtrunA17_Chr3g0143071 | 35.878 | 262 | 101 | 2 | 245 | 439 | 2 | 263 | 7.48e-35 | 131 |
| Msa1243070 | MtrunA17_Chr5g0431011 | 30.380 | 316 | 161 | 7 | 179 | 442 | 281 | 589 | 4.30e-32 | 130 |
| Msa1243070 | MtrunA17_Chr4g0019431 | 32.424 | 330 | 144 | 10 | 179 | 442 | 54 | 370 | 4.91e-32 | 127 |
| Msa1243070 | MtrunA17_Chr8g0359381 | 28.313 | 332 | 162 | 7 | 179 | 442 | 629 | 952 | 5.97e-30 | 124 |
| Msa1243070 | MtrunA17_Chr8g0336101 | 34.300 | 207 | 69 | 2 | 314 | 453 | 4 | 210 | 6.79e-30 | 116 |
| Msa1243070 | MtrunA17_Chr4g0002791 | 32.377 | 244 | 127 | 6 | 179 | 390 | 219 | 456 | 4.68e-28 | 116 |
| Msa1243070 | MtrunA17_Chr4g0023831 | 29.429 | 333 | 157 | 8 | 179 | 442 | 1398 | 1721 | 9.02e-28 | 118 |
| Msa1243070 | MtrunA17_Chr6g0476431 | 60.526 | 76 | 30 | 0 | 1 | 76 | 1 | 76 | 3.47e-27 | 104 |
| Msa1243070 | MtrunA17_Chr1g0179291 | 28.972 | 321 | 155 | 7 | 189 | 442 | 22 | 336 | 2.32e-26 | 110 |
| Msa1243070 | MtrunA17_Chr3g0131371 | 28.614 | 332 | 161 | 8 | 179 | 442 | 164 | 487 | 7.80e-26 | 110 |
| Msa1243070 | MtrunA17_Chr4g0029891 | 27.302 | 315 | 148 | 6 | 194 | 442 | 22 | 321 | 4.92e-25 | 106 |
| Msa1243070 | MtrunA17_Chr5g0411291 | 34.101 | 217 | 76 | 2 | 306 | 455 | 398 | 614 | 3.28e-24 | 106 |
| Msa1243070 | MtrunA17_Chr2g0306141 | 37.333 | 150 | 61 | 1 | 337 | 453 | 23 | 172 | 2.36e-23 | 97.1 |
| Msa1243070 | MtrunA17_Chr2g0296781 | 61.842 | 76 | 29 | 0 | 1 | 76 | 1 | 76 | 3.18e-23 | 103 |
| Msa1243070 | MtrunA17_Chr2g0296541 | 39.552 | 134 | 48 | 1 | 337 | 437 | 30 | 163 | 4.83e-22 | 92.8 |
| Msa1243070 | MtrunA17_Chr2g0296731 | 27.301 | 326 | 136 | 10 | 182 | 442 | 195 | 484 | 9.21e-22 | 98.2 |
| Msa1243070 | MtrunA17_Chr5g0446781 | 32.178 | 202 | 97 | 6 | 227 | 394 | 9 | 204 | 1.53e-21 | 93.2 |
| Msa1243070 | MtrunA17_Chr8g0383421 | 36.196 | 163 | 68 | 2 | 327 | 453 | 9 | 171 | 7.85e-21 | 89.7 |
| Msa1243070 | MtrunA17_Chr8g0392081 | 40.397 | 151 | 76 | 4 | 193 | 336 | 194 | 337 | 1.63e-20 | 93.6 |
| Msa1243070 | MtrunA17_Chr7g0273511 | 30.769 | 273 | 108 | 8 | 231 | 439 | 2 | 257 | 4.73e-20 | 89.7 |
| Msa1243070 | MtrunA17_Chr5g0430981 | 30.493 | 223 | 89 | 5 | 292 | 451 | 12 | 231 | 3.98e-19 | 87.0 |
| Msa1243070 | MtrunA17_Chr1g0196541 | 56.579 | 76 | 33 | 0 | 1 | 76 | 1 | 76 | 8.45e-19 | 89.7 |
| Msa1243070 | MtrunA17_Chr3g0085661 | 28.625 | 269 | 171 | 6 | 175 | 436 | 217 | 471 | 2.80e-18 | 87.8 |
| Msa1243070 | MtrunA17_Chr2g0328151 | 36.434 | 129 | 49 | 1 | 337 | 432 | 6 | 134 | 7.32e-18 | 80.9 |
| Msa1243070 | MtrunA17_Chr4g0064991 | 32.738 | 168 | 92 | 5 | 215 | 374 | 75 | 229 | 6.40e-16 | 77.8 |
| Msa1243070 | MtrunA17_Chr8g0381671 | 56.140 | 57 | 25 | 0 | 337 | 393 | 24 | 80 | 1.61e-15 | 72.8 |
| Msa1243070 | MtrunA17_Chr6g0469751 | 34.884 | 215 | 99 | 8 | 179 | 359 | 1 | 208 | 4.59e-15 | 74.3 |
| Msa1243070 | MtrunA17_Chr4g0032041 | 40.196 | 102 | 52 | 2 | 236 | 337 | 59 | 151 | 3.15e-14 | 71.6 |
| Msa1243070 | MtrunA17_Chr2g0297221 | 49.206 | 63 | 32 | 0 | 337 | 399 | 38 | 100 | 9.22e-14 | 68.2 |
| Msa1243070 | MtrunA17_Chr7g0243691 | 41.333 | 75 | 39 | 1 | 385 | 454 | 13 | 87 | 1.76e-11 | 60.8 |
| Msa1243070 | MtrunA17_Chr7g0267681 | 45.000 | 60 | 33 | 0 | 394 | 453 | 14 | 73 | 3.08e-11 | 59.7 |
| Msa1243070 | MtrunA17_Chr7g0221041 | 50.980 | 51 | 25 | 0 | 224 | 274 | 3 | 53 | 3.46e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 120 sgRNAs with CRISPR-Local
Find 387 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACAATACAGGGTTAAAT+TGG | 0.124513 | 8_2:-28114528 | Msa1243070:CDS |
| TGATTTGGCTTGCTTCTATT+TGG | 0.160498 | 8_2:-28115955 | Msa1243070:CDS |
| AGCATAATTCTTGTAATATT+TGG | 0.164717 | 8_2:+28119224 | None:intergenic |
| ATGTTGGAGGGAGTGGTGTT+GGG | 0.281420 | 8_2:-28116425 | Msa1243070:CDS |
| TCAAGGTGTTAGCTTGGTTT+TGG | 0.290181 | 8_2:-28115859 | Msa1243070:CDS |
| GATTTGGCTTGCTTCTATTT+GGG | 0.295945 | 8_2:-28115954 | Msa1243070:CDS |
| AACCGATGGTGGAACAATTA+AGG | 0.304793 | 8_2:-28117145 | Msa1243070:CDS |
| TGTTGGAGGGAGTGGTGTTG+GGG | 0.306649 | 8_2:-28116424 | Msa1243070:CDS |
| TTTCGGATGGTTTGAGAAGT+TGG | 0.312288 | 8_2:-28116511 | Msa1243070:CDS |
| TACCTATTTAGAACTCTTAG+AGG | 0.320971 | 8_2:-28118127 | Msa1243070:intron |
| TATGCTCGACGTGTGGGTTT+TGG | 0.346175 | 8_2:-28119207 | Msa1243070:CDS |
| TTGCTTCTATTTGGGCTATT+CGG | 0.347990 | 8_2:-28115946 | Msa1243070:CDS |
| TATGTTGGAGGGAGTGGTGT+TGG | 0.349979 | 8_2:-28116426 | Msa1243070:CDS |
| TCAAGCCCCGTCAAAGATAT+TGG | 0.359685 | 8_2:-28116257 | Msa1243070:intron |
| TACCTCTAAGAGTTCTAAAT+AGG | 0.360614 | 8_2:+28118125 | None:intergenic |
| CCGGAGGAGGAGGGAAATTT+CGG | 0.360938 | 8_2:-28116374 | Msa1243070:intron |
| TAGTGTGCTAATTTCTTCAA+TGG | 0.367841 | 8_2:+28118341 | None:intergenic |
| TCCCACGTTGTCACCTTTCT+CGG | 0.368734 | 8_2:+28117167 | None:intergenic |
| TTTGATTCCATTTGTATACT+TGG | 0.371598 | 8_2:-28117210 | Msa1243070:CDS |
| ACGGGAGGTTGGTTTAATTT+CGG | 0.373225 | 8_2:-28116528 | Msa1243070:CDS |
| AATGATATTATCTTCAATAA+TGG | 0.376965 | 8_2:-28115914 | Msa1243070:CDS |
| CCGAAATTTCCCTCCTCCTC+CGG | 0.387478 | 8_2:+28116374 | None:intergenic |
| ATTTAACCCTGTATTGTTTG+TGG | 0.388574 | 8_2:+28114531 | None:intergenic |
| CCCGAGGTGGTTAGGAAGTT+AGG | 0.393365 | 8_2:-28116659 | Msa1243070:CDS |
| TGTGATCTAATAATAGCATT+TGG | 0.406366 | 8_2:+28119078 | None:intergenic |
| GAGATGGAGGCCGGAGGAGG+AGG | 0.409795 | 8_2:-28116384 | Msa1243070:CDS |
| CGTAGTTCCACAAACAATAC+AGG | 0.415845 | 8_2:-28114538 | Msa1243070:CDS |
| TTCCTTAATTGTTCCACCAT+CGG | 0.424642 | 8_2:+28117143 | None:intergenic |
| GGTTCAAACCCGAGGTGGTT+AGG | 0.429250 | 8_2:-28116667 | Msa1243070:CDS |
| ACTAGGTATGTTGGAGGGAG+TGG | 0.434155 | 8_2:-28116432 | Msa1243070:CDS |
| AGGAGGGGAGTGGGACTAGT+TGG | 0.434586 | 8_2:-28116688 | Msa1243070:CDS |
| GATTGTTGTGTACGGGAGGT+TGG | 0.435667 | 8_2:-28116539 | Msa1243070:CDS |
| CAAGTGCTTGTAGATAAGTA+TGG | 0.438182 | 8_2:-28116797 | Msa1243070:CDS |
| AGAAAGGGTATTAACCGGTT+TGG | 0.441387 | 8_2:-28114223 | Msa1243070:CDS |
| GTGATAGAAAGGGTATTAAC+CGG | 0.449392 | 8_2:-28114228 | Msa1243070:CDS |
| CAAAGATATTGGCATTTGCT+TGG | 0.449913 | 8_2:-28116246 | Msa1243070:CDS |
| GATAAGTATGGAGAGGGAGT+GGG | 0.454552 | 8_2:-28116785 | Msa1243070:CDS |
| TGATAATTTACTAGGTATGT+TGG | 0.459249 | 8_2:-28116441 | Msa1243070:CDS |
| TTTGGGCTATTCGGAAGAAA+AGG | 0.471087 | 8_2:-28115937 | Msa1243070:CDS |
| GAACTACTTGATAATTTACT+AGG | 0.475133 | 8_2:-28116449 | Msa1243070:CDS |
| GAGCAGAGAAGTCGCCAAAC+CGG | 0.478146 | 8_2:+28114209 | None:intergenic |
| AGATAAGTATGGAGAGGGAG+TGG | 0.480214 | 8_2:-28116786 | Msa1243070:CDS |
| TTGTGGAACTACGCCAACTC+TGG | 0.483194 | 8_2:+28114548 | None:intergenic |
| TCAAGCCCTTGGTGATAGAA+AGG | 0.484165 | 8_2:-28114239 | Msa1243070:CDS |
| TTGATTCCATTTGTATACTT+GGG | 0.486384 | 8_2:-28117209 | Msa1243070:CDS |
| TGGTGGAACAATTAAGGAAA+AGG | 0.486407 | 8_2:-28117139 | Msa1243070:CDS |
| CCTAACTTCCTAACCACCTC+GGG | 0.486453 | 8_2:+28116659 | None:intergenic |
| TAGGCATTGCTTCAAGCCCT+TGG | 0.487529 | 8_2:-28114250 | Msa1243070:CDS |
| AAACAATACAGGGTTAAATT+GGG | 0.491144 | 8_2:-28114527 | Msa1243070:intron |
| CTTGTAGATAAGTATGGAGA+GGG | 0.494999 | 8_2:-28116791 | Msa1243070:CDS |
| TTTCTCGGATTCGCCCCTAC+CGG | 0.499264 | 8_2:+28117182 | None:intergenic |
| GGGAGTCCCAAGTATACAAA+TGG | 0.500109 | 8_2:+28117203 | None:intergenic |
| ATAATATCAAGGTGTTAGCT+TGG | 0.507567 | 8_2:-28115865 | Msa1243070:CDS |
| GCAAATGCCAATATCTTTGA+CGG | 0.507942 | 8_2:+28116250 | None:intergenic |
| ATTAGATCACAGTGTAAGGC+TGG | 0.510239 | 8_2:-28119066 | Msa1243070:CDS |
| GTTGGAGGGAGTGGTGTTGG+GGG | 0.514247 | 8_2:-28116423 | Msa1243070:CDS |
| CAAATGCCAATATCTTTGAC+GGG | 0.515684 | 8_2:+28116251 | None:intergenic |
| TTCTCGGATTCGCCCCTACC+GGG | 0.517221 | 8_2:+28117183 | None:intergenic |
| TTGGAGATGGAGGCCGGAGG+AGG | 0.518270 | 8_2:-28116387 | Msa1243070:CDS |
| TATACTTGGGACTCCCGGTA+GGG | 0.519244 | 8_2:-28117196 | Msa1243070:CDS |
| AAGAATTATGCTCGACGTGT+GGG | 0.520083 | 8_2:-28119213 | Msa1243070:CDS |
| TATTATTAGATCACAGTGTA+AGG | 0.521507 | 8_2:-28119070 | Msa1243070:CDS |
| TTGTGTGTGGCAGGAGGAAA+CGG | 0.522487 | 8_2:-28116137 | Msa1243070:CDS |
| GGCAAAAGGATTGTTGTGTA+CGG | 0.523321 | 8_2:-28116547 | Msa1243070:CDS |
| TGATGATTGGAGATGGAGGC+CGG | 0.524786 | 8_2:-28116393 | Msa1243070:CDS |
| CCACCTCACAGTGCAAGAAA+AGG | 0.526254 | 8_2:+28116107 | None:intergenic |
| ATAAGTATGGAGAGGGAGTG+GGG | 0.530614 | 8_2:-28116784 | Msa1243070:CDS |
| TTATAGAGGAGTGTTGAATG+TGG | 0.532291 | 8_2:-28116182 | Msa1243070:CDS |
| GCCGTGAGGGTATCAAACGG+AGG | 0.532957 | 8_2:-28116761 | Msa1243070:CDS |
| GAGGTTGGTTTAATTTCGGA+TGG | 0.533964 | 8_2:-28116524 | Msa1243070:CDS |
| TAAACTAAGTTCACCCGTGT+TGG | 0.537490 | 8_2:+28116202 | None:intergenic |
| GCAAAAGGATTGTTGTGTAC+GGG | 0.537694 | 8_2:-28116546 | Msa1243070:CDS |
| ATCGGCTAGCTTCCTTGTGG+TGG | 0.544462 | 8_2:-28116730 | Msa1243070:CDS |
| AAGGGAGTGATGATTGGAGA+TGG | 0.545560 | 8_2:-28116400 | Msa1243070:CDS |
| GATATTATCTTCAATAATGG+TGG | 0.546508 | 8_2:-28115911 | Msa1243070:CDS |
| CAAACGGAGGGGTTGAGTAT+CGG | 0.547339 | 8_2:-28116748 | Msa1243070:CDS |
| CAAGAATTATGCTCGACGTG+TGG | 0.548280 | 8_2:-28119214 | Msa1243070:CDS |
| CGGGTGAACTTAGTTTATAG+AGG | 0.552599 | 8_2:-28116196 | Msa1243070:CDS |
| ATTTGTATACTTGGGACTCC+CGG | 0.553205 | 8_2:-28117201 | Msa1243070:CDS |
| GGTCCAGGATCTTGTGCAGA+TGG | 0.555730 | 8_2:-28117848 | Msa1243070:intron |
| GCTTGTAGATAAGTATGGAG+AGG | 0.556501 | 8_2:-28116792 | Msa1243070:CDS |
| CAAGCCCTTGGTGATAGAAA+GGG | 0.558881 | 8_2:-28114238 | Msa1243070:CDS |
| TAATTTACTAGGTATGTTGG+AGG | 0.564184 | 8_2:-28116438 | Msa1243070:CDS |
| AGATGGAGGCCGGAGGAGGA+GGG | 0.565212 | 8_2:-28116383 | Msa1243070:CDS |
| GTATACTTGGGACTCCCGGT+AGG | 0.565366 | 8_2:-28117197 | Msa1243070:CDS |
| ATAGAAGTCGATTCCAGAGT+TGG | 0.569403 | 8_2:-28114561 | Msa1243070:CDS |
| GACAACGTGGGAACCGATGG+TGG | 0.574106 | 8_2:-28117156 | Msa1243070:CDS |
| GGAATTGGTCGATAATATCA+AGG | 0.574566 | 8_2:-28115876 | Msa1243070:CDS |
| GGTAGGGGCGAATCCGAGAA+AGG | 0.577555 | 8_2:-28117180 | Msa1243070:CDS |
| GTGGTTAGGAAGTTAGGAGA+TGG | 0.579134 | 8_2:-28116653 | Msa1243070:CDS |
| AATACCCTTTCTATCACCAA+GGG | 0.583290 | 8_2:+28114234 | None:intergenic |
| TCAATGTTTCATCGATCAAG+AGG | 0.583351 | 8_2:+28114187 | None:intergenic |
| ATACTTGGGACTCCCGGTAG+GGG | 0.585410 | 8_2:-28117195 | Msa1243070:CDS |
| GGTGACAACGTGGGAACCGA+TGG | 0.585567 | 8_2:-28117159 | Msa1243070:CDS |
| CCGTGAGGGTATCAAACGGA+GGG | 0.589092 | 8_2:-28116760 | Msa1243070:CDS |
| TAGAGGAGTGTTGAATGTGG+AGG | 0.590805 | 8_2:-28116179 | Msa1243070:CDS |
| TCCTAACTTCCTAACCACCT+CGG | 0.595406 | 8_2:+28116658 | None:intergenic |
| ACTTCTAAGAAAATTAGAAG+AGG | 0.604018 | 8_2:-28115986 | Msa1243070:CDS |
| AATTTACTAGGTATGTTGGA+GGG | 0.607008 | 8_2:-28116437 | Msa1243070:CDS |
| TGCAAGAAGCTATTCAAGCA+AGG | 0.612876 | 8_2:-28119118 | Msa1243070:CDS |
| GGGGCCGTGAGGGTATCAAA+CGG | 0.614223 | 8_2:-28116764 | Msa1243070:CDS |
| CCCTCCGTTTGATACCCTCA+CGG | 0.626300 | 8_2:+28116760 | None:intergenic |
| AAAGGATTGTTGTGTACGGG+AGG | 0.629467 | 8_2:-28116543 | Msa1243070:CDS |
| GGAGTGATGATTGGAGATGG+AGG | 0.631027 | 8_2:-28116397 | Msa1243070:CDS |
| AATCAAATCTTTCCACCACA+AGG | 0.632852 | 8_2:+28116718 | None:intergenic |
| TAATACCCTTTCTATCACCA+AGG | 0.635810 | 8_2:+28114233 | None:intergenic |
| TAAGTATGGAGAGGGAGTGG+GGG | 0.642681 | 8_2:-28116783 | Msa1243070:CDS |
| TAGTTGGTTCAAACCCGAGG+TGG | 0.665170 | 8_2:-28116672 | Msa1243070:CDS |
| AAATGCCAATATCTTTGACG+GGG | 0.667025 | 8_2:+28116252 | None:intergenic |
| AGTATCGGCTAGCTTCCTTG+TGG | 0.669375 | 8_2:-28116733 | Msa1243070:CDS |
| GACTAGTTGGTTCAAACCCG+AGG | 0.671564 | 8_2:-28116675 | Msa1243070:CDS |
| CGTGAGGGTATCAAACGGAG+GGG | 0.680977 | 8_2:-28116759 | Msa1243070:CDS |
| TTTATGCTTTGAGAGTAACA+TGG | 0.683126 | 8_2:+28118159 | None:intergenic |
| TACTTGATAGAATTCCAACA+CGG | 0.688880 | 8_2:-28116216 | Msa1243070:CDS |
| ATCCGAGAAAGGTGACAACG+TGG | 0.691423 | 8_2:-28117169 | Msa1243070:CDS |
| TGGAAGCTTCTCAAAGACGA+TGG | 0.691697 | 8_2:-28116833 | Msa1243070:intron |
| GTAGTTCCACAAACAATACA+GGG | 0.693564 | 8_2:-28114537 | Msa1243070:CDS |
| TGATTGGAGATGGAGGCCGG+AGG | 0.697441 | 8_2:-28116390 | Msa1243070:CDS |
| ACTTGATAGAATTCCAACAC+GGG | 0.711333 | 8_2:-28116215 | Msa1243070:CDS |
| TCCGAGAAAGGTGACAACGT+GGG | 0.713991 | 8_2:-28117168 | Msa1243070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAATTAATTTAAAT+TGG | - | chr8_2:28115209-28115228 | Msa1243070:intron | 0.0% |
| !!! | GAACAATTTTATTTATATTA+TGG | - | chr8_2:28115231-28115250 | Msa1243070:intron | 10.0% |
| !! | AATGATATTATCTTCAATAA+TGG | - | chr8_2:28117533-28117552 | Msa1243070:intron | 15.0% |
| !! | CAATATTAAAATTATGTATG+TGG | + | chr8_2:28118370-28118389 | None:intergenic | 15.0% |
| !!! | CACATACATAATTTTAATAT+TGG | - | chr8_2:28118368-28118387 | Msa1243070:CDS | 15.0% |
| !! | TTGAAATTGAATATATATGT+AGG | - | chr8_2:28119141-28119160 | Msa1243070:CDS | 15.0% |
| !! | AGCATAATTCTTGTAATATT+TGG | + | chr8_2:28114226-28114245 | None:intergenic | 20.0% |
| !! | TAAAATATCTTGACTTTGTT+GGG | + | chr8_2:28114477-28114496 | None:intergenic | 20.0% |
| !!! | TTAACGTAAGTAGAAATTTT+CGG | - | chr8_2:28114560-28114579 | Msa1243070:CDS | 20.0% |
| !!! | TATATAGTTTTAAAGACACA+AGG | - | chr8_2:28114647-28114666 | Msa1243070:intron | 20.0% |
| !!! | TTAGAATATTTCCATTTTGA+GGG | + | chr8_2:28114866-28114885 | None:intergenic | 20.0% |
| !!! | TTTAGAATATTTCCATTTTG+AGG | + | chr8_2:28114867-28114886 | None:intergenic | 20.0% |
| !!! | ATTCAATATATTTGTTTTGC+AGG | - | chr8_2:28115263-28115282 | Msa1243070:intron | 20.0% |
| !!! | CATTCATTTGTTCTTTTTAT+AGG | - | chr8_2:28115404-28115423 | Msa1243070:intron | 20.0% |
| !!! | AAAGTACAAGATATACTTTT+GGG | + | chr8_2:28115866-28115885 | None:intergenic | 20.0% |
| !!! | AAAAGTACAAGATATACTTT+TGG | + | chr8_2:28115867-28115886 | None:intergenic | 20.0% |
| !!! | AAAAGTATATCTTGTACTTT+TGG | - | chr8_2:28115866-28115885 | Msa1243070:CDS | 20.0% |
| !! | AAAAATACATATGCAAGATT+TGG | + | chr8_2:28116032-28116051 | None:intergenic | 20.0% |
| !! | AGTTATAGAAATTGATGTAA+AGG | + | chr8_2:28116068-28116087 | None:intergenic | 20.0% |
| !! | TTTCTATAACTCACATATTA+TGG | - | chr8_2:28116077-28116096 | Msa1243070:intron | 20.0% |
| !!! | GGAAATAGATATATTAGTTT+GGG | - | chr8_2:28116343-28116362 | Msa1243070:intron | 20.0% |
| !! | AGAAAAGAAAGATAGAAAAT+AGG | + | chr8_2:28116409-28116428 | None:intergenic | 20.0% |
| !!! | AAATGAACAAAAAGATTTTG+AGG | + | chr8_2:28117419-28117438 | None:intergenic | 20.0% |
| !!! | TTTTTGTTCATTTTGAATGT+TGG | - | chr8_2:28117426-28117445 | Msa1243070:intron | 20.0% |
| !!! | CAAAAATTAAAAGTGTACTA+TGG | + | chr8_2:28118180-28118199 | None:intergenic | 20.0% |
| !!! | TTTTGAGCAATACTTTATTT+TGG | - | chr8_2:28118195-28118214 | Msa1243070:intron | 20.0% |
| !! | AGTTCAATCAAAAATTTGAA+AGG | + | chr8_2:28118485-28118504 | None:intergenic | 20.0% |
| !! | TTGTTAACAATGAATAAGAT+TGG | + | chr8_2:28118629-28118648 | None:intergenic | 20.0% |
| !!! | CAGTTTCATTTTTTGATTTT+CGG | + | chr8_2:28118793-28118812 | None:intergenic | 20.0% |
| !! | AAATAGAATTTAAGAAAGCT+GGG | - | chr8_2:28118954-28118973 | Msa1243070:intron | 20.0% |
| ! | ATTTCAAAAAATGCAGATGA+TGG | - | chr8_2:28114276-28114295 | Msa1243070:intron | 25.0% |
| ! | TGTGATCTAATAATAGCATT+TGG | + | chr8_2:28114372-28114391 | None:intergenic | 25.0% |
| ! | TATTATTAGATCACAGTGTA+AGG | - | chr8_2:28114377-28114396 | Msa1243070:intron | 25.0% |
| ! | AAAATATCTTGACTTTGTTG+GGG | + | chr8_2:28114476-28114495 | None:intergenic | 25.0% |
| ! | CTAAAATATCTTGACTTTGT+TGG | + | chr8_2:28114478-28114497 | None:intergenic | 25.0% |
| ! | TCATATAAAAAGGAGGTTAT+AGG | - | chr8_2:28114519-28114538 | Msa1243070:intron | 25.0% |
| ! | ATTTATTGCAAGTGATGAAT+TGG | - | chr8_2:28114779-28114798 | Msa1243070:intron | 25.0% |
| !!! | AATTTTATATTTTTTGCCGC+AGG | - | chr8_2:28115029-28115048 | Msa1243070:intron | 25.0% |
| !!! | ATTTTATATTTTTTGCCGCA+GGG | - | chr8_2:28115030-28115049 | Msa1243070:intron | 25.0% |
| !!! | TATCTTTGATTTGGATTGAA+GGG | + | chr8_2:28115158-28115177 | None:intergenic | 25.0% |
| !!! | ATATCTTTGATTTGGATTGA+AGG | + | chr8_2:28115159-28115178 | None:intergenic | 25.0% |
| ! | TCAATTGGATATCTTTGATT+TGG | + | chr8_2:28115167-28115186 | None:intergenic | 25.0% |
| ! | ATATCCAATTGAAGTAAATC+AGG | - | chr8_2:28115175-28115194 | Msa1243070:intron | 25.0% |
| ! | TTTCATAAGAGTTGTTTGAT+AGG | - | chr8_2:28116154-28116173 | Msa1243070:CDS | 25.0% |
| !! | AACTTTTTGAATTGTAGTCA+AGG | - | chr8_2:28116214-28116233 | Msa1243070:CDS | 25.0% |
| ! | TTTGATTCCATTTGTATACT+TGG | - | chr8_2:28116237-28116256 | Msa1243070:CDS | 25.0% |
| ! | TTGATTCCATTTGTATACTT+GGG | - | chr8_2:28116238-28116257 | Msa1243070:CDS | 25.0% |
| ! | GGGAAATAGATATATTAGTT+TGG | - | chr8_2:28116342-28116361 | Msa1243070:intron | 25.0% |
| !! | AATAGATATATTAGTTTGGG+AGG | - | chr8_2:28116346-28116365 | Msa1243070:intron | 25.0% |
| !!! | TCTTTCTTTTCTAAAAATGC+TGG | - | chr8_2:28116417-28116436 | Msa1243070:CDS | 25.0% |
| !!! | CTAGTTTTTGGAAGAAAAAT+TGG | - | chr8_2:28116825-28116844 | Msa1243070:CDS | 25.0% |
| !! | GAACTACTTGATAATTTACT+AGG | - | chr8_2:28116998-28117017 | Msa1243070:intron | 25.0% |
| ! | TGATAATTTACTAGGTATGT+TGG | - | chr8_2:28117006-28117025 | Msa1243070:intron | 25.0% |
| ! | ATTGATTGTAATATTCCCAA+AGG | - | chr8_2:28117134-28117153 | Msa1243070:CDS | 25.0% |
| !!! | TTTTGAATGTTGGTTTAATG+AGG | - | chr8_2:28117436-28117455 | Msa1243070:intron | 25.0% |
| !! | ACTTCTAAGAAAATTAGAAG+AGG | - | chr8_2:28117461-28117480 | Msa1243070:intron | 25.0% |
| ! | GATATTATCTTCAATAATGG+TGG | - | chr8_2:28117536-28117555 | Msa1243070:intron | 25.0% |
| !!! | TTTGGTTCTGGTAATAATAT+TGG | - | chr8_2:28117910-28117929 | Msa1243070:intron | 25.0% |
| !! | TGAATGCTATATTTTTCACA+AGG | + | chr8_2:28118000-28118019 | None:intergenic | 25.0% |
| ! | TGTAATGATATCTTGTGTAA+AGG | + | chr8_2:28118285-28118304 | None:intergenic | 25.0% |
| !!! | TTCTCTGTTTGATTTGTTTT+GGG | + | chr8_2:28118670-28118689 | None:intergenic | 25.0% |
| ! | AAACAATACAGGGTTAAATT+GGG | - | chr8_2:28118920-28118939 | Msa1243070:intron | 25.0% |
| ! | GAAATAGAATTTAAGAAAGC+TGG | - | chr8_2:28118953-28118972 | Msa1243070:intron | 25.0% |
| ! | AGTTTAATAACACAGTAAAG+AGG | - | chr8_2:28119095-28119114 | Msa1243070:CDS | 25.0% |
| ! | GTTTCTGTTACTATATATGT+AGG | - | chr8_2:28119178-28119197 | Msa1243070:CDS | 25.0% |
| AATGTGTGTATGTCTTTAGA+TGG | - | chr8_2:28114408-28114427 | Msa1243070:intron | 30.0% | |
| ! | TTTTAGATGCAACAAGAACT+TGG | - | chr8_2:28114492-28114511 | Msa1243070:intron | 30.0% |
| TTATAGGTTAATGATCAAGC+TGG | - | chr8_2:28114535-28114554 | Msa1243070:CDS | 30.0% | |
| ! | GGCTATGATAATCTTACTTT+TGG | - | chr8_2:28114605-28114624 | Msa1243070:intron | 30.0% |
| ! | TTTTCAACATCATCTCTTCT+TGG | + | chr8_2:28114965-28114984 | None:intergenic | 30.0% |
| TAGTGTGCTAATTTCTTCAA+TGG | + | chr8_2:28115109-28115128 | None:intergenic | 30.0% | |
| !! | TTTATGCTTTGAGAGTAACA+TGG | + | chr8_2:28115291-28115310 | None:intergenic | 30.0% |
| ! | TACCTATTTAGAACTCTTAG+AGG | - | chr8_2:28115320-28115339 | Msa1243070:intron | 30.0% |
| !! | TACCTCTAAGAGTTCTAAAT+AGG | + | chr8_2:28115325-28115344 | None:intergenic | 30.0% |
| GTGCTAATAGTTAAAGAAAC+AGG | + | chr8_2:28115842-28115861 | None:intergenic | 30.0% | |
| TTGTTTGATAGGTGTTAATG+TGG | - | chr8_2:28116165-28116184 | Msa1243070:CDS | 30.0% | |
| !! | TTTTCTAAAAATGCTGGCTA+AGG | - | chr8_2:28116423-28116442 | Msa1243070:CDS | 30.0% |
| CCAAAGAAAATTTCTTTGGA+GGG | + | chr8_2:28116467-28116486 | None:intergenic | 30.0% | |
| ! | CCTCCAAAGAAATTTTCTTT+GGG | - | chr8_2:28116465-28116484 | Msa1243070:CDS | 30.0% |
| ! | CTCCAAAGAAATTTTCTTTG+GGG | - | chr8_2:28116466-28116485 | Msa1243070:CDS | 30.0% |
| ! | TCCAAAGAAATTTTCTTTGG+GGG | - | chr8_2:28116467-28116486 | Msa1243070:CDS | 30.0% |
| !! | GTGGAAAGATTTGATTTTGT+TGG | - | chr8_2:28116736-28116755 | Msa1243070:CDS | 30.0% |
| !! | GAAAGATTTGATTTTGTTGG+AGG | - | chr8_2:28116739-28116758 | Msa1243070:CDS | 30.0% |
| !!! | ATGGTATGAGTACTAGTTTT+TGG | - | chr8_2:28116813-28116832 | Msa1243070:CDS | 30.0% |
| TAATTTACTAGGTATGTTGG+AGG | - | chr8_2:28117009-28117028 | Msa1243070:intron | 30.0% | |
| AATTTACTAGGTATGTTGGA+GGG | - | chr8_2:28117010-28117029 | Msa1243070:intron | 30.0% | |
| AGCATGTGTTTGATTATCTT+TGG | - | chr8_2:28117162-28117181 | Msa1243070:CDS | 30.0% | |
| TACTTGATAGAATTCCAACA+CGG | - | chr8_2:28117231-28117250 | Msa1243070:intron | 30.0% | |
| !! | GAAGAGGTTTTTGTTTGATT+TGG | - | chr8_2:28117477-28117496 | Msa1243070:intron | 30.0% |
| ! | ATAATATCAAGGTGTTAGCT+TGG | - | chr8_2:28117582-28117601 | Msa1243070:intron | 30.0% |
| TGCTTACTTAAATAACCATC+CGG | - | chr8_2:28117674-28117693 | Msa1243070:intron | 30.0% | |
| AATAGCCTCAAAATAAACAC+CGG | + | chr8_2:28117696-28117715 | None:intergenic | 30.0% | |
| !!! | TTTTGAGGCTATTTTGTTTG+AGG | - | chr8_2:28117703-28117722 | Msa1243070:intron | 30.0% |
| !! | TTTGAGGCTATTTTGTTTGA+GGG | - | chr8_2:28117704-28117723 | Msa1243070:intron | 30.0% |
| ! | TTTTCACAAGGAAATTGCAT+TGG | + | chr8_2:28117988-28118007 | None:intergenic | 30.0% |
| CTGTTTGTTTGTCTAGATAA+GGG | + | chr8_2:28118044-28118063 | None:intergenic | 30.0% | |
| TCTGTTTGTTTGTCTAGATA+AGG | + | chr8_2:28118045-28118064 | None:intergenic | 30.0% | |
| TTATCTAGACAAACAAACAG+AGG | - | chr8_2:28118044-28118063 | Msa1243070:intron | 30.0% | |
| GAAGTATGATAACAGAAACA+AGG | + | chr8_2:28118121-28118140 | None:intergenic | 30.0% | |
| AAGTGTACTATGGTAGAAAA+GGG | + | chr8_2:28118170-28118189 | None:intergenic | 30.0% | |
| AAAGTGTACTATGGTAGAAA+AGG | + | chr8_2:28118171-28118190 | None:intergenic | 30.0% | |
| GAAAGGATTCAACTTTGAAT+TGG | + | chr8_2:28118468-28118487 | None:intergenic | 30.0% | |
| ! | AGCTTAGTTTAGTTTCATTC+AGG | - | chr8_2:28118506-28118525 | Msa1243070:intron | 30.0% |
| ! | AGTTTAGTTTCATTCAGGTT+TGG | - | chr8_2:28118511-28118530 | Msa1243070:intron | 30.0% |
| ATTAAAGTTTACATACTCGC+TGG | - | chr8_2:28118586-28118605 | Msa1243070:intron | 30.0% | |
| !!! | TCTCTGTTTGATTTGTTTTG+GGG | + | chr8_2:28118669-28118688 | None:intergenic | 30.0% |
| !!! | CTTCTCTGTTTGATTTGTTT+TGG | + | chr8_2:28118671-28118690 | None:intergenic | 30.0% |
| CAAAACAAATCAAACAGAGA+AGG | - | chr8_2:28118669-28118688 | Msa1243070:intron | 30.0% | |
| !! | TTTGATTTTCGGTGAGAAAT+TGG | + | chr8_2:28118782-28118801 | None:intergenic | 30.0% |
| ATTTAACCCTGTATTGTTTG+TGG | + | chr8_2:28118919-28118938 | None:intergenic | 30.0% | |
| CAAACAATACAGGGTTAAAT+TGG | - | chr8_2:28118919-28118938 | Msa1243070:intron | 30.0% | |
| TTCAATTTCAACAAGTTCCA+TGG | + | chr8_2:28119132-28119151 | None:intergenic | 30.0% | |
| TATGTAGGCATTAAACTAAG+AGG | - | chr8_2:28119156-28119175 | Msa1243070:CDS | 30.0% | |
| ACTTGGACGCTCATATAAAA+AGG | - | chr8_2:28114509-28114528 | Msa1243070:intron | 35.0% | |
| ! | AAGTAGAAATTTTCGGTCCA+TGG | - | chr8_2:28114567-28114586 | Msa1243070:CDS | 35.0% |
| !! | GAATATTTCCATTTTGAGGG+AGG | + | chr8_2:28114863-28114882 | None:intergenic | 35.0% |
| ATTGTGAAGATGAAGATTGC+AGG | - | chr8_2:28114896-28114915 | Msa1243070:intron | 35.0% | |
| ACTCTAGATAATAATCCCTG+CGG | + | chr8_2:28115048-28115067 | None:intergenic | 35.0% | |
| TGCACCTGATTTACTTCAAT+TGG | + | chr8_2:28115182-28115201 | None:intergenic | 35.0% | |
| GATAAACCATTATCACCATG+AGG | - | chr8_2:28115444-28115463 | Msa1243070:intron | 35.0% | |
| !!! | TTGTTCCTTTTGGAGTTTCT+CGG | - | chr8_2:28115563-28115582 | Msa1243070:intron | 35.0% |
| CATCTGTCAAACAGAATTAG+AGG | + | chr8_2:28115729-28115748 | None:intergenic | 35.0% | |
| TGTTCCAGTTTCATTTGCTT+TGG | - | chr8_2:28115747-28115766 | Msa1243070:intron | 35.0% | |
| TGATCCAAAGCAAATGAAAC+TGG | + | chr8_2:28115754-28115773 | None:intergenic | 35.0% | |
| ! | AGTTTCATTTGCTTTGGATC+AGG | - | chr8_2:28115753-28115772 | Msa1243070:intron | 35.0% |
| ! | GTTTCATTTGCTTTGGATCA+GGG | - | chr8_2:28115754-28115773 | Msa1243070:intron | 35.0% |
| ! | GTGTTTTATGATGTGGATCA+GGG | - | chr8_2:28115776-28115795 | Msa1243070:intron | 35.0% |
| TTCCTTAATTGTTCCACCAT+CGG | + | chr8_2:28116307-28116326 | None:intergenic | 35.0% | |
| TGGTGGAACAATTAAGGAAA+AGG | - | chr8_2:28116308-28116327 | Msa1243070:intron | 35.0% | |
| TATATCTATTTCCCCACGAA+AGG | + | chr8_2:28116336-28116355 | None:intergenic | 35.0% | |
| ACGTATTGTCCTTCTAAACT+CGG | - | chr8_2:28116369-28116388 | Msa1243070:intron | 35.0% | |
| !! | AATTAAGCACCGAGTTTAGA+AGG | + | chr8_2:28116381-28116400 | None:intergenic | 35.0% |
| ! | CCCTCCAAAGAAATTTTCTT+TGG | - | chr8_2:28116464-28116483 | Msa1243070:CDS | 35.0% |
| CCCAAAGAAAATTTCTTTGG+AGG | + | chr8_2:28116468-28116487 | None:intergenic | 35.0% | |
| ! | CCAAAGAAATTTTCTTTGGG+GGG | - | chr8_2:28116468-28116487 | Msa1243070:CDS | 35.0% |
| AACATTTGACTAGAAGGCTA+AGG | + | chr8_2:28116592-28116611 | None:intergenic | 35.0% | |
| TCCATCAACATTTGACTAGA+AGG | + | chr8_2:28116598-28116617 | None:intergenic | 35.0% | |
| CAAGTGCTTGTAGATAAGTA+TGG | - | chr8_2:28116650-28116669 | Msa1243070:CDS | 35.0% | |
| CTTGTAGATAAGTATGGAGA+GGG | - | chr8_2:28116656-28116675 | Msa1243070:CDS | 35.0% | |
| AATCAAATCTTTCCACCACA+AGG | + | chr8_2:28116732-28116751 | None:intergenic | 35.0% | |
| !! | AGATTTGATTTTGTTGGAGG+AGG | - | chr8_2:28116742-28116761 | Msa1243070:CDS | 35.0% |
| !! | GATTTGATTTTGTTGGAGGA+GGG | - | chr8_2:28116743-28116762 | Msa1243070:CDS | 35.0% |
| !! | ATTTGATTTTGTTGGAGGAG+GGG | - | chr8_2:28116744-28116763 | Msa1243070:CDS | 35.0% |
| ! | TTTTGTGCTTTCAAGGCAAA+AGG | - | chr8_2:28116886-28116905 | Msa1243070:intron | 35.0% |
| !! | TGAGAAGTTGGAGTTTTATG+TGG | - | chr8_2:28116948-28116967 | Msa1243070:intron | 35.0% |
| TTGTAATATTCCCAAAGGTG+AGG | - | chr8_2:28117139-28117158 | Msa1243070:CDS | 35.0% | |
| AAATGCCAATATCTTTGACG+GGG | + | chr8_2:28117198-28117217 | None:intergenic | 35.0% | |
| CAAATGCCAATATCTTTGAC+GGG | + | chr8_2:28117199-28117218 | None:intergenic | 35.0% | |
| GCAAATGCCAATATCTTTGA+CGG | + | chr8_2:28117200-28117219 | None:intergenic | 35.0% | |
| CAAAGATATTGGCATTTGCT+TGG | - | chr8_2:28117201-28117220 | Msa1243070:CDS | 35.0% | |
| ACTTGATAGAATTCCAACAC+GGG | - | chr8_2:28117232-28117251 | Msa1243070:intron | 35.0% | |
| !! | TTATAGAGGAGTGTTGAATG+TGG | - | chr8_2:28117265-28117284 | Msa1243070:intron | 35.0% |
| ! | AGAATTGTGTGTTTTGTGTG+TGG | - | chr8_2:28117297-28117316 | Msa1243070:intron | 35.0% |
| ! | TGGTTTTCTAAGTGTGTCAA+AGG | - | chr8_2:28117360-28117379 | Msa1243070:intron | 35.0% |
| ! | GGTTTTCTAAGTGTGTCAAA+GGG | - | chr8_2:28117361-28117380 | Msa1243070:intron | 35.0% |
| !! | TGATTTGGCTTGCTTCTATT+TGG | - | chr8_2:28117492-28117511 | Msa1243070:intron | 35.0% |
| !! | GATTTGGCTTGCTTCTATTT+GGG | - | chr8_2:28117493-28117512 | Msa1243070:intron | 35.0% |
| TTGCTTCTATTTGGGCTATT+CGG | - | chr8_2:28117501-28117520 | Msa1243070:intron | 35.0% | |
| !!! | TAATGGTGGTTTTGAGATTG+AGG | - | chr8_2:28117550-28117569 | Msa1243070:intron | 35.0% |
| !!! | TGGTTTTGAGATTGAGGAAT+TGG | - | chr8_2:28117556-28117575 | Msa1243070:intron | 35.0% |
| GGAATTGGTCGATAATATCA+AGG | - | chr8_2:28117571-28117590 | Msa1243070:intron | 35.0% | |
| CTTCGTGTTTGTATTATGAG+TGG | - | chr8_2:28117633-28117652 | Msa1243070:intron | 35.0% | |
| ATTTAAGTAAGCATTCCCGA+GGG | + | chr8_2:28117667-28117686 | None:intergenic | 35.0% | |
| TATTTAAGTAAGCATTCCCG+AGG | + | chr8_2:28117668-28117687 | None:intergenic | 35.0% | |
| AAAACTCTCAAGACGAAAGT+TGG | + | chr8_2:28117893-28117912 | None:intergenic | 35.0% | |
| ! | AACTTTCGTCTTGAGAGTTT+TGG | - | chr8_2:28117892-28117911 | Msa1243070:intron | 35.0% |
| AAGGAAATTGCATTGGAGAA+AGG | + | chr8_2:28117981-28118000 | None:intergenic | 35.0% | |
| GGTAGAAAAGGGTAAAATAC+TGG | + | chr8_2:28118159-28118178 | None:intergenic | 35.0% | |
| GGATTCAAGTAGTTGTGTTT+AGG | + | chr8_2:28118329-28118348 | None:intergenic | 35.0% | |
| TTGAATCCATCAATTCCACA+TGG | - | chr8_2:28118341-28118360 | Msa1243070:CDS | 35.0% | |
| TTATGTATGTGGTTTCCATG+TGG | + | chr8_2:28118359-28118378 | None:intergenic | 35.0% | |
| !!! | CTCTGTTTGATTTGTTTTGG+GGG | + | chr8_2:28118668-28118687 | None:intergenic | 35.0% |
| GTAGTTCCACAAACAATACA+GGG | - | chr8_2:28118910-28118929 | Msa1243070:intron | 35.0% | |
| AACAGAACTGAACTGCTATA+TGG | + | chr8_2:28119023-28119042 | None:intergenic | 35.0% | |
| AAGAGGATTTGCATTTACCA+TGG | - | chr8_2:28119112-28119131 | Msa1243070:CDS | 35.0% | |
| AATACCCTTTCTATCACCAA+GGG | + | chr8_2:28119216-28119235 | None:intergenic | 35.0% | |
| TAATACCCTTTCTATCACCA+AGG | + | chr8_2:28119217-28119236 | None:intergenic | 35.0% | |
| !! | GTGATAGAAAGGGTATTAAC+CGG | - | chr8_2:28119219-28119238 | Msa1243070:CDS | 35.0% |
| AAGAATTATGCTCGACGTGT+GGG | - | chr8_2:28114234-28114253 | Msa1243070:CDS | 40.0% | |
| TGCAAGAAGCTATTCAAGCA+AGG | - | chr8_2:28114329-28114348 | Msa1243070:intron | 40.0% | |
| ATTAGATCACAGTGTAAGGC+TGG | - | chr8_2:28114381-28114400 | Msa1243070:intron | 40.0% | |
| TGGACGCTCATATAAAAAGG+AGG | - | chr8_2:28114512-28114531 | Msa1243070:intron | 40.0% | |
| ! | CCAATTTGCTTCAACAACCA+TGG | + | chr8_2:28114587-28114606 | None:intergenic | 40.0% |
| CCATGGTTGTTGAAGCAAAT+TGG | - | chr8_2:28114584-28114603 | Msa1243070:CDS | 40.0% | |
| CATCATCAACGAGAACACAA+AGG | + | chr8_2:28114759-28114778 | None:intergenic | 40.0% | |
| GCAAGTGATGAATTGGATCA+AGG | - | chr8_2:28114786-28114805 | Msa1243070:intron | 40.0% | |
| TCATGTCCTCATGGTGATAA+TGG | + | chr8_2:28115453-28115472 | None:intergenic | 40.0% | |
| ACATGAATGAACCGCTTCTT+TGG | - | chr8_2:28115467-28115486 | Msa1243070:intron | 40.0% | |
| CATGAATGAACCGCTTCTTT+GGG | - | chr8_2:28115468-28115487 | Msa1243070:intron | 40.0% | |
| TATGATGGTTGCGTTTCTTC+AGG | - | chr8_2:28115537-28115556 | Msa1243070:intron | 40.0% | |
| !! | TTTCTCGGCCTGTTTTTCTT+CGG | - | chr8_2:28115578-28115597 | Msa1243070:intron | 40.0% |
| !! | TCGCATTTTGAGTAGCTTGT+CGG | - | chr8_2:28115647-28115666 | Msa1243070:intron | 40.0% |
| !! | GATCAGGGTGTTTTATGATG+TGG | - | chr8_2:28115769-28115788 | Msa1243070:intron | 40.0% |
| ! | GGTGTTTTATGATGTGGATC+AGG | - | chr8_2:28115775-28115794 | Msa1243070:intron | 40.0% |
| !! | ATGTGGATCAGGGTGTTTTA+TGG | - | chr8_2:28115786-28115805 | Msa1243070:intron | 40.0% |
| TCACATATTATGGACCCTGA+AGG | - | chr8_2:28116087-28116106 | Msa1243070:intron | 40.0% | |
| ATTTGTATACTTGGGACTCC+CGG | - | chr8_2:28116246-28116265 | Msa1243070:CDS | 40.0% | |
| !! | AACCGATGGTGGAACAATTA+AGG | - | chr8_2:28116302-28116321 | Msa1243070:intron | 40.0% |
| ! | TCTAAAAATGCTGGCTAAGG+TGG | - | chr8_2:28116426-28116445 | Msa1243070:CDS | 40.0% |
| CCCCCCAAAGAAAATTTCTT+TGG | + | chr8_2:28116471-28116490 | None:intergenic | 40.0% | |
| !! | AAGAAATTTTCTTTGGGGGG+TGG | - | chr8_2:28116471-28116490 | Msa1243070:CDS | 40.0% |
| !! | AGAAATTTTCTTTGGGGGGT+GGG | - | chr8_2:28116472-28116491 | Msa1243070:CDS | 40.0% |
| CCAATTTACCCAACACAATC+TGG | + | chr8_2:28116507-28116526 | None:intergenic | 40.0% | |
| CCAGATTGTGTTGGGTAAAT+TGG | - | chr8_2:28116504-28116523 | Msa1243070:CDS | 40.0% | |
| GATTGTGTTGGGTAAATTGG+AGG | - | chr8_2:28116507-28116526 | Msa1243070:CDS | 40.0% | |
| GCCTTCTAGTCAAATGTTGA+TGG | - | chr8_2:28116594-28116613 | Msa1243070:CDS | 40.0% | |
| GCTTGTAGATAAGTATGGAG+AGG | - | chr8_2:28116655-28116674 | Msa1243070:CDS | 40.0% | |
| ! | CTTGAAAGCACAAAAAGTCG+CGG | + | chr8_2:28116881-28116900 | None:intergenic | 40.0% |
| GGCAAAAGGATTGTTGTGTA+CGG | - | chr8_2:28116900-28116919 | Msa1243070:intron | 40.0% | |
| GCAAAAGGATTGTTGTGTAC+GGG | - | chr8_2:28116901-28116920 | Msa1243070:intron | 40.0% | |
| !! | ACGGGAGGTTGGTTTAATTT+CGG | - | chr8_2:28116919-28116938 | Msa1243070:intron | 40.0% |
| !! | GAGGTTGGTTTAATTTCGGA+TGG | - | chr8_2:28116923-28116942 | Msa1243070:intron | 40.0% |
| TTTCGGATGGTTTGAGAAGT+TGG | - | chr8_2:28116936-28116955 | Msa1243070:intron | 40.0% | |
| ! | GCGTAGAGATCTTTTCGTTT+GGG | - | chr8_2:28116970-28116989 | Msa1243070:intron | 40.0% |
| ! | AGATCTTTTCGTTTGGGAGT+CGG | - | chr8_2:28116976-28116995 | Msa1243070:intron | 40.0% |
| GTGCTATAATCTTCTCGAGA+AGG | - | chr8_2:28117103-28117122 | Msa1243070:intron | 40.0% | |
| TAAACTAAGTTCACCCGTGT+TGG | + | chr8_2:28117248-28117267 | None:intergenic | 40.0% | |
| CGGGTGAACTTAGTTTATAG+AGG | - | chr8_2:28117251-28117270 | Msa1243070:intron | 40.0% | |
| TGTGTCAAAGGGTAATGAGT+TGG | - | chr8_2:28117372-28117391 | Msa1243070:intron | 40.0% | |
| TTTGGGCTATTCGGAAGAAA+AGG | - | chr8_2:28117510-28117529 | Msa1243070:intron | 40.0% | |
| !! | TCAAGGTGTTAGCTTGGTTT+TGG | - | chr8_2:28117588-28117607 | Msa1243070:intron | 40.0% |
| !!! | ACCATCCGGTGTTTATTTTG+AGG | - | chr8_2:28117688-28117707 | Msa1243070:intron | 40.0% |
| !! | GGTGTTGTATGGTGTTTTTC+CGG | - | chr8_2:28117866-28117885 | Msa1243070:intron | 40.0% |
| TGGTTTCCATGTGGAATTGA+TGG | + | chr8_2:28118350-28118369 | None:intergenic | 40.0% | |
| TAGGTCGAGAGTGAATTAGT+GGG | - | chr8_2:28118735-28118754 | Msa1243070:intron | 40.0% | |
| AGGAAGGGATTAAGTGATTG+TGG | - | chr8_2:28118832-28118851 | Msa1243070:intron | 40.0% | |
| AAGGGATTAAGTGATTGTGG+TGG | - | chr8_2:28118835-28118854 | Msa1243070:intron | 40.0% | |
| ! | ATAGAAGTCGATTCCAGAGT+TGG | - | chr8_2:28118886-28118905 | Msa1243070:intron | 40.0% |
| CGTAGTTCCACAAACAATAC+AGG | - | chr8_2:28118909-28118928 | Msa1243070:intron | 40.0% | |
| !! | AGAAAGGGTATTAACCGGTT+TGG | - | chr8_2:28119224-28119243 | Msa1243070:CDS | 40.0% |
| CAAGAATTATGCTCGACGTG+TGG | - | chr8_2:28114233-28114252 | Msa1243070:CDS | 45.0% | |
| CCTTTACTTCGAGCTTCTGT+AGG | + | chr8_2:28114836-28114855 | None:intergenic | 45.0% | |
| CCTACAGAAGCTCGAAGTAA+AGG | - | chr8_2:28114833-28114852 | Msa1243070:intron | 45.0% | |
| AAGGACATCCTCCCTCAAAA+TGG | - | chr8_2:28114852-28114871 | Msa1243070:intron | 45.0% | |
| TGCATGCATCTCGACTATGA+TGG | - | chr8_2:28115522-28115541 | Msa1243070:intron | 45.0% | |
| !! | CTTCAGGAGCTTGTTCCTTT+TGG | - | chr8_2:28115553-28115572 | Msa1243070:intron | 45.0% |
| ATCCTGGACCGAAGAAAAAC+AGG | + | chr8_2:28115589-28115608 | None:intergenic | 45.0% | |
| GGAGTCAGAATTCATGTCGA+TGG | - | chr8_2:28116186-28116205 | Msa1243070:CDS | 45.0% | |
| GGGAGTCCCAAGTATACAAA+TGG | + | chr8_2:28116247-28116266 | None:intergenic | 45.0% | |
| TAAGGAAAAGGCTCCTTTCG+TGG | - | chr8_2:28116320-28116339 | Msa1243070:intron | 45.0% | |
| AAGGAAAAGGCTCCTTTCGT+GGG | - | chr8_2:28116321-28116340 | Msa1243070:intron | 45.0% | |
| AAGAGGTGACCAGATTGTGT+TGG | - | chr8_2:28116495-28116514 | Msa1243070:CDS | 45.0% | |
| AGAGGTGACCAGATTGTGTT+GGG | - | chr8_2:28116496-28116515 | Msa1243070:CDS | 45.0% | |
| TGTGTTGGGTAAATTGGAGG+AGG | - | chr8_2:28116510-28116529 | Msa1243070:CDS | 45.0% | |
| GTGTTGGGTAAATTGGAGGA+GGG | - | chr8_2:28116511-28116530 | Msa1243070:CDS | 45.0% | |
| GTATGCCAACCAAGGCAAAA+GGG | - | chr8_2:28116533-28116552 | Msa1243070:CDS | 45.0% | |
| AGGAGTGAGAGATGTGAAGT+TGG | - | chr8_2:28116562-28116581 | Msa1243070:CDS | 45.0% | |
| TGGAAGCTTCTCAAAGACGA+TGG | - | chr8_2:28116614-28116633 | Msa1243070:CDS | 45.0% | |
| AGATAAGTATGGAGAGGGAG+TGG | - | chr8_2:28116661-28116680 | Msa1243070:CDS | 45.0% | |
| GATAAGTATGGAGAGGGAGT+GGG | - | chr8_2:28116662-28116681 | Msa1243070:CDS | 45.0% | |
| ATAAGTATGGAGAGGGAGTG+GGG | - | chr8_2:28116663-28116682 | Msa1243070:CDS | 45.0% | |
| TCCTAACTTCCTAACCACCT+CGG | + | chr8_2:28116792-28116811 | None:intergenic | 45.0% | |
| GTGGTTAGGAAGTTAGGAGA+TGG | - | chr8_2:28116794-28116813 | Msa1243070:CDS | 45.0% | |
| GCGGAAAAAGCTCACAAAAG+GGG | + | chr8_2:28116862-28116881 | None:intergenic | 45.0% | |
| CGCGGAAAAAGCTCACAAAA+GGG | + | chr8_2:28116863-28116882 | None:intergenic | 45.0% | |
| TCGCGGAAAAAGCTCACAAA+AGG | + | chr8_2:28116864-28116883 | None:intergenic | 45.0% | |
| ! | CGCGACTTTTTGTGCTTTCA+AGG | - | chr8_2:28116879-28116898 | Msa1243070:intron | 45.0% |
| AAAGGATTGTTGTGTACGGG+AGG | - | chr8_2:28116904-28116923 | Msa1243070:intron | 45.0% | |
| ! | GGCGTAGAGATCTTTTCGTT+TGG | - | chr8_2:28116969-28116988 | Msa1243070:intron | 45.0% |
| AAGGGAGTGATGATTGGAGA+TGG | - | chr8_2:28117047-28117066 | Msa1243070:intron | 45.0% | |
| AACACATGCTCCTCACCTTT+GGG | + | chr8_2:28117152-28117171 | None:intergenic | 45.0% | |
| AAACACATGCTCCTCACCTT+TGG | + | chr8_2:28117153-28117172 | None:intergenic | 45.0% | |
| TCAAGCCCCGTCAAAGATAT+TGG | - | chr8_2:28117190-28117209 | Msa1243070:CDS | 45.0% | |
| !! | TAGAGGAGTGTTGAATGTGG+AGG | - | chr8_2:28117268-28117287 | Msa1243070:intron | 45.0% |
| ! | TTGTGTGTTTTGTGTGTGGC+AGG | - | chr8_2:28117301-28117320 | Msa1243070:intron | 45.0% |
| ! | ACACCTTTTCTTGCACTGTG+AGG | - | chr8_2:28117337-28117356 | Msa1243070:intron | 45.0% |
| !!! | TGTTAGCTTGGTTTTGGAGC+TGG | - | chr8_2:28117594-28117613 | Msa1243070:intron | 45.0% |
| !! | ATGAGTGGTGTTGTTACCCT+CGG | - | chr8_2:28117648-28117667 | Msa1243070:intron | 45.0% |
| GCCTCAAAATAAACACCGGA+TGG | + | chr8_2:28117692-28117711 | None:intergenic | 45.0% | |
| !! | ATTTTGTTTGAGGGCAGCTG+TGG | - | chr8_2:28117713-28117732 | Msa1243070:intron | 45.0% |
| GCGCATACGCTAAAAAAGGT+GGG | + | chr8_2:28117843-28117862 | None:intergenic | 45.0% | |
| AGCGCATACGCTAAAAAAGG+TGG | + | chr8_2:28117844-28117863 | None:intergenic | 45.0% | |
| !!! | ACCTTTTTTAGCGTATGCGC+TGG | - | chr8_2:28117843-28117862 | Msa1243070:CDS | 45.0% |
| !!! | CCTTTTTTAGCGTATGCGCT+GGG | - | chr8_2:28117844-28117863 | Msa1243070:CDS | 45.0% |
| !!! | CTTTTTTAGCGTATGCGCTG+GGG | - | chr8_2:28117845-28117864 | Msa1243070:intron | 45.0% |
| ! | TCTCAAGACGAAAGTTGGTC+CGG | + | chr8_2:28117888-28117907 | None:intergenic | 45.0% |
| !!! | CGTCTTGAGAGTTTTGGTTC+TGG | - | chr8_2:28117898-28117917 | Msa1243070:intron | 45.0% |
| ACTCTCGACCTAGTAGAACA+CGG | + | chr8_2:28118727-28118746 | None:intergenic | 45.0% | |
| CTAGGTCGAGAGTGAATTAG+TGG | - | chr8_2:28118734-28118753 | Msa1243070:intron | 45.0% | |
| AGGTCGAGAGTGAATTAGTG+GGG | - | chr8_2:28118736-28118755 | Msa1243070:intron | 45.0% | |
| AACTGCGTGCACGAAGAAAA+AGG | - | chr8_2:28118808-28118827 | Msa1243070:intron | 45.0% | |
| ACTGCGTGCACGAAGAAAAA+GGG | - | chr8_2:28118809-28118828 | Msa1243070:intron | 45.0% | |
| CACGAAGAAAAAGGGAGGAA+GGG | - | chr8_2:28118817-28118836 | Msa1243070:intron | 45.0% | |
| TTGTGCAAACCACACGAATG+AGG | + | chr8_2:28118986-28119005 | None:intergenic | 45.0% | |
| !! | CGTGTGGTTTGCACAAGTTT+TGG | - | chr8_2:28118990-28119009 | Msa1243070:intron | 45.0% |
| ! | TCAAGCCCTTGGTGATAGAA+AGG | - | chr8_2:28119208-28119227 | Msa1243070:CDS | 45.0% |
| ! | CAAGCCCTTGGTGATAGAAA+GGG | - | chr8_2:28119209-28119228 | Msa1243070:CDS | 45.0% |
| ! | TATGCTCGACGTGTGGGTTT+TGG | - | chr8_2:28114240-28114259 | Msa1243070:CDS | 50.0% |
| GCGGTTCATTCATGTCCTCA+TGG | + | chr8_2:28115462-28115481 | None:intergenic | 50.0% | |
| ACTCGCAACTCCCAAAGAAG+CGG | + | chr8_2:28115481-28115500 | None:intergenic | 50.0% | |
| ACAGGCCGAGAAACTCCAAA+AGG | + | chr8_2:28115571-28115590 | None:intergenic | 50.0% | |
| ACACCATCTGCACAAGATCC+TGG | + | chr8_2:28115605-28115624 | None:intergenic | 50.0% | |
| CATCTCGAACCCTCTCAACA+AGG | + | chr8_2:28116113-28116132 | None:intergenic | 50.0% | |
| CTTGTTGAGAGGGTTCGAGA+TGG | - | chr8_2:28116111-28116130 | Msa1243070:CDS | 50.0% | |
| AGAGGGTTCGAGATGGTCTT+GGG | - | chr8_2:28116118-28116137 | Msa1243070:CDS | 50.0% | |
| TATACTTGGGACTCCCGGTA+GGG | - | chr8_2:28116251-28116270 | Msa1243070:CDS | 50.0% | |
| ATCCGAGAAAGGTGACAACG+TGG | - | chr8_2:28116278-28116297 | Msa1243070:intron | 50.0% | |
| TCCGAGAAAGGTGACAACGT+GGG | - | chr8_2:28116279-28116298 | Msa1243070:intron | 50.0% | |
| TCCCACGTTGTCACCTTTCT+CGG | + | chr8_2:28116283-28116302 | None:intergenic | 50.0% | |
| AGGAAAAGGCTCCTTTCGTG+GGG | - | chr8_2:28116322-28116341 | Msa1243070:intron | 50.0% | |
| ! | TAAGGTGGTCAAGATGGTGG+TGG | - | chr8_2:28116441-28116460 | Msa1243070:CDS | 50.0% |
| GGTATGCCAACCAAGGCAAA+AGG | - | chr8_2:28116532-28116551 | Msa1243070:CDS | 50.0% | |
| ! | AACCACCCTTTTGCCTTGGT+TGG | + | chr8_2:28116541-28116560 | None:intergenic | 50.0% |
| ! | CCTAAACCACCCTTTTGCCT+TGG | + | chr8_2:28116545-28116564 | None:intergenic | 50.0% |
| CCAAGGCAAAAGGGTGGTTT+AGG | - | chr8_2:28116542-28116561 | Msa1243070:CDS | 50.0% | |
| TAAGTATGGAGAGGGAGTGG+GGG | - | chr8_2:28116664-28116683 | Msa1243070:CDS | 50.0% | |
| CAAACGGAGGGGTTGAGTAT+CGG | - | chr8_2:28116699-28116718 | Msa1243070:CDS | 50.0% | |
| !! | AGTATCGGCTAGCTTCCTTG+TGG | - | chr8_2:28116714-28116733 | Msa1243070:CDS | 50.0% |
| ! | ATTTTGTTGGAGGAGGGGAG+TGG | - | chr8_2:28116749-28116768 | Msa1243070:CDS | 50.0% |
| ! | TTTTGTTGGAGGAGGGGAGT+GGG | - | chr8_2:28116750-28116769 | Msa1243070:CDS | 50.0% |
| ! | GACTAGTTGGTTCAAACCCG+AGG | - | chr8_2:28116772-28116791 | Msa1243070:CDS | 50.0% |
| ! | TAGTTGGTTCAAACCCGAGG+TGG | - | chr8_2:28116775-28116794 | Msa1243070:CDS | 50.0% |
| CCTAACTTCCTAACCACCTC+GGG | + | chr8_2:28116791-28116810 | None:intergenic | 50.0% | |
| GATTGTTGTGTACGGGAGGT+TGG | - | chr8_2:28116908-28116927 | Msa1243070:intron | 50.0% | |
| ACTAGGTATGTTGGAGGGAG+TGG | - | chr8_2:28117015-28117034 | Msa1243070:intron | 50.0% | |
| TATGTTGGAGGGAGTGGTGT+TGG | - | chr8_2:28117021-28117040 | Msa1243070:intron | 50.0% | |
| ATGTTGGAGGGAGTGGTGTT+GGG | - | chr8_2:28117022-28117041 | Msa1243070:intron | 50.0% | |
| GGAGTGATGATTGGAGATGG+AGG | - | chr8_2:28117050-28117069 | Msa1243070:intron | 50.0% | |
| TGATGATTGGAGATGGAGGC+CGG | - | chr8_2:28117054-28117073 | Msa1243070:intron | 50.0% | |
| ! | TGTGTTTTGTGTGTGGCAGG+AGG | - | chr8_2:28117304-28117323 | Msa1243070:intron | 50.0% |
| TTGTGTGTGGCAGGAGGAAA+CGG | - | chr8_2:28117310-28117329 | Msa1243070:intron | 50.0% | |
| CCACCTCACAGTGCAAGAAA+AGG | + | chr8_2:28117343-28117362 | None:intergenic | 50.0% | |
| ! | CCTTTTCTTGCACTGTGAGG+TGG | - | chr8_2:28117340-28117359 | Msa1243070:intron | 50.0% |
| !! | TGAGTGGTGTTGTTACCCTC+GGG | - | chr8_2:28117649-28117668 | Msa1243070:intron | 50.0% |
| !!! | GGGCAGCTGTGGTAGTTTTT+TGG | - | chr8_2:28117724-28117743 | Msa1243070:intron | 50.0% |
| ! | TTAGCCGTGCAGCTGTGTTT+TGG | - | chr8_2:28117766-28117785 | Msa1243070:intron | 50.0% |
| ! | TAGCCGTGCAGCTGTGTTTT+GGG | - | chr8_2:28117767-28117786 | Msa1243070:intron | 50.0% |
| CCCAGCGCATACGCTAAAAA+AGG | + | chr8_2:28117847-28117866 | None:intergenic | 50.0% | |
| GGCGTGCAAAGTGATCAACT+CGG | - | chr8_2:28118065-28118084 | Msa1243070:intron | 50.0% | |
| GCATCAGACCGTGTTCTACT+AGG | - | chr8_2:28118716-28118735 | Msa1243070:intron | 50.0% | |
| TAGTGGGGCTTCAACAAGAG+AGG | - | chr8_2:28118751-28118770 | Msa1243070:intron | 50.0% | |
| GCACGAAGAAAAAGGGAGGA+AGG | - | chr8_2:28118816-28118835 | Msa1243070:intron | 50.0% | |
| AGTGATTGTGGTGGTATCGC+AGG | - | chr8_2:28118844-28118863 | Msa1243070:intron | 50.0% | |
| TTGTGGAACTACGCCAACTC+TGG | + | chr8_2:28118902-28118921 | None:intergenic | 50.0% | |
| TGCAAACCACACGAATGAGG+TGG | + | chr8_2:28118983-28119002 | None:intergenic | 50.0% | |
| ! | TAGGCATTGCTTCAAGCCCT+TGG | - | chr8_2:28119197-28119216 | Msa1243070:CDS | 50.0% |
| !! | GGCCTGTTTTTCTTCGGTCC+AGG | - | chr8_2:28115584-28115603 | Msa1243070:intron | 55.0% |
| GGTCCAGGATCTTGTGCAGA+TGG | - | chr8_2:28115599-28115618 | Msa1243070:intron | 55.0% | |
| !! | ACCCTGAAGGCCTTGTTGAG+AGG | - | chr8_2:28116100-28116119 | Msa1243070:intron | 55.0% |
| CCCTCTCAACAAGGCCTTCA+GGG | + | chr8_2:28116104-28116123 | None:intergenic | 55.0% | |
| !! | CCCTGAAGGCCTTGTTGAGA+GGG | - | chr8_2:28116101-28116120 | Msa1243070:intron | 55.0% |
| ACCCTCTCAACAAGGCCTTC+AGG | + | chr8_2:28116105-28116124 | None:intergenic | 55.0% | |
| GAGAGGGTTCGAGATGGTCT+TGG | - | chr8_2:28116117-28116136 | Msa1243070:CDS | 55.0% | |
| GTATACTTGGGACTCCCGGT+AGG | - | chr8_2:28116250-28116269 | Msa1243070:CDS | 55.0% | |
| ATACTTGGGACTCCCGGTAG+GGG | - | chr8_2:28116252-28116271 | Msa1243070:CDS | 55.0% | |
| TTTCTCGGATTCGCCCCTAC+CGG | + | chr8_2:28116268-28116287 | None:intergenic | 55.0% | |
| GCTGGCTAAGGTGGTCAAGA+TGG | - | chr8_2:28116435-28116454 | Msa1243070:CDS | 55.0% | |
| GGCTAAGGTGGTCAAGATGG+TGG | - | chr8_2:28116438-28116457 | Msa1243070:CDS | 55.0% | |
| ! | TTTCTTTGGGGGGTGGGAAG+AGG | - | chr8_2:28116478-28116497 | Msa1243070:CDS | 55.0% |
| TGCCAACCAAGGCAAAAGGG+TGG | - | chr8_2:28116536-28116555 | Msa1243070:CDS | 55.0% | |
| CCCTCCGTTTGATACCCTCA+CGG | + | chr8_2:28116690-28116709 | None:intergenic | 55.0% | |
| !! | CCGTGAGGGTATCAAACGGA+GGG | - | chr8_2:28116687-28116706 | Msa1243070:CDS | 55.0% |
| !! | CGTGAGGGTATCAAACGGAG+GGG | - | chr8_2:28116688-28116707 | Msa1243070:CDS | 55.0% |
| !! | ATCGGCTAGCTTCCTTGTGG+TGG | - | chr8_2:28116717-28116736 | Msa1243070:CDS | 55.0% |
| GGTTCAAACCCGAGGTGGTT+AGG | - | chr8_2:28116780-28116799 | Msa1243070:CDS | 55.0% | |
| CCCGAGGTGGTTAGGAAGTT+AGG | - | chr8_2:28116788-28116807 | Msa1243070:CDS | 55.0% | |
| ! | TGTTGGAGGGAGTGGTGTTG+GGG | - | chr8_2:28117023-28117042 | Msa1243070:intron | 55.0% |
| TGGGGGAAGGGAGTGATGAT+TGG | - | chr8_2:28117041-28117060 | Msa1243070:intron | 55.0% | |
| CCGAAATTTCCCTCCTCCTC+CGG | + | chr8_2:28117076-28117095 | None:intergenic | 55.0% | |
| CCGGAGGAGGAGGGAAATTT+CGG | - | chr8_2:28117073-28117092 | Msa1243070:intron | 55.0% | |
| ! | AGCCGTGCAGCTGTGTTTTG+GGG | - | chr8_2:28117768-28117787 | Msa1243070:intron | 55.0% |
| CACCCCAAAACACAGCTGCA+CGG | + | chr8_2:28117773-28117792 | None:intergenic | 55.0% | |
| !!! | TGCAGCTGTGTTTTGGGGTG+TGG | - | chr8_2:28117773-28117792 | Msa1243070:intron | 55.0% |
| !!! | TGTTTTGGGGTGTGGAGTGC+TGG | - | chr8_2:28117781-28117800 | Msa1243070:intron | 55.0% |
| !! | GTATGCGCTGGGGTGTTGTA+TGG | - | chr8_2:28117855-28117874 | Msa1243070:intron | 55.0% |
| AAGTGTTACGCTCACACGCG+CGG | + | chr8_2:28118096-28118115 | None:intergenic | 55.0% | |
| GCGTGCACGAAGAAAAAGGG+AGG | - | chr8_2:28118812-28118831 | Msa1243070:intron | 55.0% | |
| TGTGGTGGTATCGCAGGATG+TGG | - | chr8_2:28118850-28118869 | Msa1243070:intron | 55.0% | |
| GAGCAGAGAAGTCGCCAAAC+CGG | + | chr8_2:28119241-28119260 | None:intergenic | 55.0% | |
| TTCTCGGATTCGCCCCTACC+GGG | + | chr8_2:28116267-28116286 | None:intergenic | 60.0% | |
| GGTAGGGGCGAATCCGAGAA+AGG | - | chr8_2:28116267-28116286 | Msa1243070:intron | 60.0% | |
| GGTGACAACGTGGGAACCGA+TGG | - | chr8_2:28116288-28116307 | Msa1243070:intron | 60.0% | |
| GACAACGTGGGAACCGATGG+TGG | - | chr8_2:28116291-28116310 | Msa1243070:intron | 60.0% | |
| ! | GGAGGAGGGTATGCCAACCA+AGG | - | chr8_2:28116525-28116544 | Msa1243070:CDS | 60.0% |
| !! | GGGGCCGTGAGGGTATCAAA+CGG | - | chr8_2:28116683-28116702 | Msa1243070:CDS | 60.0% |
| !! | GCCGTGAGGGTATCAAACGG+AGG | - | chr8_2:28116686-28116705 | Msa1243070:CDS | 60.0% |
| ! | AGGAGGGGAGTGGGACTAGT+TGG | - | chr8_2:28116759-28116778 | Msa1243070:CDS | 60.0% |
| ! | GTTGGAGGGAGTGGTGTTGG+GGG | - | chr8_2:28117024-28117043 | Msa1243070:intron | 60.0% |
| ! | AGGGAGTGGTGTTGGGGGAA+GGG | - | chr8_2:28117029-28117048 | Msa1243070:intron | 60.0% |
| TGATTGGAGATGGAGGCCGG+AGG | - | chr8_2:28117057-28117076 | Msa1243070:intron | 60.0% | |
| GGGATGCCACCTCATTCGTG+TGG | - | chr8_2:28118974-28118993 | Msa1243070:intron | 60.0% | |
| ! | GAGGGAGTGGTGTTGGGGGA+AGG | - | chr8_2:28117028-28117047 | Msa1243070:intron | 65.0% |
| TTGGAGATGGAGGCCGGAGG+AGG | - | chr8_2:28117060-28117079 | Msa1243070:intron | 65.0% | |
| AGATGGAGGCCGGAGGAGGA+GGG | - | chr8_2:28117064-28117083 | Msa1243070:intron | 65.0% | |
| AGAGGGAGTGGGGGCCGTGA+GGG | - | chr8_2:28116673-28116692 | Msa1243070:CDS | 70.0% | |
| GAGATGGAGGCCGGAGGAGG+AGG | - | chr8_2:28117063-28117082 | Msa1243070:intron | 70.0% | |
| GAGAGGGAGTGGGGGCCGTG+AGG | - | chr8_2:28116672-28116691 | Msa1243070:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 28114195 | 28119274 | 28114195 | ID=Msa1243070;Name=Msa1243070 |
| chr8_2 | mRNA | 28114195 | 28119274 | 28114195 | ID=Msa1243070-mRNA-1;Parent=Msa1243070;Name=Msa1243070-mRNA-1;_AED=0.70;_eAED=0.70;_QI=0|0|0|0.1|1|1|10|0|502 |
| chr8_2 | exon | 28119059 | 28119274 | 28119059 | ID=Msa1243070-mRNA-1:exon:9890;Parent=Msa1243070-mRNA-1 |
| chr8_2 | exon | 28118329 | 28118418 | 28118329 | ID=Msa1243070-mRNA-1:exon:9889;Parent=Msa1243070-mRNA-1 |
| chr8_2 | exon | 28118128 | 28118184 | 28118128 | ID=Msa1243070-mRNA-1:exon:9888;Parent=Msa1243070-mRNA-1 |
| chr8_2 | exon | 28117801 | 28117863 | 28117801 | ID=Msa1243070-mRNA-1:exon:9887;Parent=Msa1243070-mRNA-1 |
| chr8_2 | exon | 28117131 | 28117238 | 28117131 | ID=Msa1243070-mRNA-1:exon:9886;Parent=Msa1243070-mRNA-1 |
| chr8_2 | exon | 28116375 | 28116849 | 28116375 | ID=Msa1243070-mRNA-1:exon:9885;Parent=Msa1243070-mRNA-1 |
| chr8_2 | exon | 28116111 | 28116274 | 28116111 | ID=Msa1243070-mRNA-1:exon:9884;Parent=Msa1243070-mRNA-1 |
| chr8_2 | exon | 28115827 | 28116011 | 28115827 | ID=Msa1243070-mRNA-1:exon:9883;Parent=Msa1243070-mRNA-1 |
| chr8_2 | exon | 28114528 | 28114603 | 28114528 | ID=Msa1243070-mRNA-1:exon:9882;Parent=Msa1243070-mRNA-1 |
| chr8_2 | exon | 28114195 | 28114269 | 28114195 | ID=Msa1243070-mRNA-1:exon:9881;Parent=Msa1243070-mRNA-1 |
| chr8_2 | CDS | 28119059 | 28119274 | 28119059 | ID=Msa1243070-mRNA-1:cds;Parent=Msa1243070-mRNA-1 |
| chr8_2 | CDS | 28118329 | 28118418 | 28118329 | ID=Msa1243070-mRNA-1:cds;Parent=Msa1243070-mRNA-1 |
| chr8_2 | CDS | 28118128 | 28118184 | 28118128 | ID=Msa1243070-mRNA-1:cds;Parent=Msa1243070-mRNA-1 |
| chr8_2 | CDS | 28117801 | 28117863 | 28117801 | ID=Msa1243070-mRNA-1:cds;Parent=Msa1243070-mRNA-1 |
| chr8_2 | CDS | 28117131 | 28117238 | 28117131 | ID=Msa1243070-mRNA-1:cds;Parent=Msa1243070-mRNA-1 |
| chr8_2 | CDS | 28116375 | 28116849 | 28116375 | ID=Msa1243070-mRNA-1:cds;Parent=Msa1243070-mRNA-1 |
| chr8_2 | CDS | 28116111 | 28116274 | 28116111 | ID=Msa1243070-mRNA-1:cds;Parent=Msa1243070-mRNA-1 |
| chr8_2 | CDS | 28115827 | 28116011 | 28115827 | ID=Msa1243070-mRNA-1:cds;Parent=Msa1243070-mRNA-1 |
| chr8_2 | CDS | 28114528 | 28114603 | 28114528 | ID=Msa1243070-mRNA-1:cds;Parent=Msa1243070-mRNA-1 |
| chr8_2 | CDS | 28114195 | 28114269 | 28114195 | ID=Msa1243070-mRNA-1:cds;Parent=Msa1243070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
