Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1245430 | XP_003628145.1 | 91.111 | 450 | 24 | 3 | 1 | 445 | 1 | 439 | 0.0 | 837 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1245430 | sp|Q93ZL5|CDF2_ARATH | 37.346 | 407 | 183 | 15 | 69 | 444 | 91 | 456 | 1.26e-60 | 207 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa1245430 | TF | C2C2-Dof |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1245430 | MtrunA17_Chr8g0355261 | 91.111 | 450 | 24 | 3 | 1 | 445 | 1 | 439 | 0.0 | 837 |
| Msa1245430 | MtrunA17_Chr6g0453321 | 37.113 | 388 | 180 | 12 | 105 | 444 | 123 | 494 | 1.05e-66 | 221 |
| Msa1245430 | MtrunA17_Chr7g0217581 | 32.685 | 514 | 253 | 20 | 1 | 444 | 92 | 582 | 3.02e-63 | 214 |
| Msa1245430 | MtrunA17_Chr4g0042481 | 33.539 | 486 | 243 | 18 | 11 | 443 | 5 | 463 | 6.39e-63 | 210 |
| Msa1245430 | MtrunA17_Chr3g0092111 | 35.059 | 425 | 200 | 16 | 64 | 444 | 72 | 464 | 3.83e-59 | 200 |
| Msa1245430 | MtrunA17_Chr7g0254161 | 36.364 | 374 | 166 | 8 | 106 | 445 | 89 | 424 | 2.70e-58 | 197 |
| Msa1245430 | MtrunA17_Chr5g0417551 | 30.870 | 460 | 200 | 18 | 12 | 445 | 4 | 371 | 9.29e-45 | 160 |
| Msa1245430 | MtrunA17_Chr5g0417561 | 32.609 | 368 | 159 | 12 | 81 | 445 | 82 | 363 | 1.12e-42 | 154 |
| Msa1245430 | MtrunA17_Chr6g0460721 | 33.432 | 338 | 139 | 14 | 14 | 317 | 13 | 298 | 8.05e-37 | 137 |
| Msa1245430 | MtrunA17_Chr6g0460731 | 30.892 | 314 | 144 | 10 | 11 | 286 | 10 | 288 | 9.85e-35 | 132 |
| Msa1245430 | MtrunA17_Chr2g0283811 | 77.419 | 62 | 14 | 0 | 110 | 171 | 39 | 100 | 2.45e-32 | 120 |
| Msa1245430 | MtrunA17_Chr5g0417571 | 64.198 | 81 | 29 | 0 | 93 | 173 | 113 | 193 | 2.82e-31 | 122 |
| Msa1245430 | MtrunA17_Chr5g0417601 | 62.338 | 77 | 29 | 0 | 95 | 171 | 117 | 193 | 1.67e-29 | 118 |
| Msa1245430 | MtrunA17_Chr5g0417601 | 32.973 | 185 | 73 | 9 | 272 | 445 | 237 | 381 | 4.34e-14 | 73.6 |
| Msa1245430 | MtrunA17_Chr4g0010151 | 67.797 | 59 | 19 | 0 | 114 | 172 | 78 | 136 | 4.27e-25 | 105 |
| Msa1245430 | MtrunA17_Chr3g0127201 | 59.701 | 67 | 27 | 0 | 107 | 173 | 16 | 82 | 5.65e-25 | 103 |
| Msa1245430 | MtrunA17_Chr2g0308011 | 74.000 | 50 | 13 | 0 | 117 | 166 | 36 | 85 | 8.33e-25 | 101 |
| Msa1245430 | MtrunA17_Chr4g0061761 | 71.698 | 53 | 15 | 0 | 116 | 168 | 38 | 90 | 2.94e-24 | 102 |
| Msa1245430 | MtrunA17_Chr8g0374111 | 60.606 | 66 | 25 | 1 | 118 | 183 | 29 | 93 | 5.86e-24 | 99.8 |
| Msa1245430 | MtrunA17_Chr8g0346551 | 61.290 | 62 | 24 | 0 | 113 | 174 | 19 | 80 | 6.04e-24 | 100 |
| Msa1245430 | MtrunA17_Chr2g0328021 | 65.000 | 60 | 21 | 0 | 118 | 177 | 62 | 121 | 6.75e-24 | 100 |
| Msa1245430 | MtrunA17_Chr4g0031411 | 66.102 | 59 | 20 | 0 | 114 | 172 | 71 | 129 | 1.00e-23 | 101 |
| Msa1245430 | MtrunA17_Chr2g0326001 | 63.333 | 60 | 22 | 0 | 113 | 172 | 35 | 94 | 1.66e-23 | 100 |
| Msa1245430 | MtrunA17_Chr8g0374251 | 72.222 | 54 | 15 | 0 | 118 | 171 | 68 | 121 | 1.75e-23 | 100 |
| Msa1245430 | MtrunA17_Chr8g0341671 | 69.231 | 52 | 16 | 0 | 118 | 169 | 20 | 71 | 4.57e-23 | 97.1 |
| Msa1245430 | MtrunA17_Chr8g0367161 | 46.914 | 81 | 43 | 0 | 92 | 172 | 6 | 86 | 9.83e-23 | 98.6 |
| Msa1245430 | MtrunA17_Chr7g0223311 | 49.451 | 91 | 35 | 2 | 82 | 172 | 52 | 131 | 1.31e-22 | 99.0 |
| Msa1245430 | MtrunA17_Chr7g0237921 | 69.811 | 53 | 16 | 0 | 120 | 172 | 78 | 130 | 1.34e-22 | 98.6 |
| Msa1245430 | MtrunA17_Chr1g0188851 | 56.452 | 62 | 27 | 0 | 112 | 173 | 37 | 98 | 1.95e-22 | 97.1 |
| Msa1245430 | MtrunA17_Chr4g0047001 | 67.925 | 53 | 17 | 0 | 120 | 172 | 57 | 109 | 7.03e-22 | 97.1 |
| Msa1245430 | MtrunA17_Chr5g0411951 | 65.455 | 55 | 19 | 0 | 114 | 168 | 39 | 93 | 7.77e-22 | 95.9 |
| Msa1245430 | MtrunA17_Chr4g0030051 | 60.000 | 65 | 25 | 1 | 107 | 170 | 29 | 93 | 3.92e-21 | 93.2 |
| Msa1245430 | MtrunA17_Chr3g0126201 | 64.151 | 53 | 19 | 0 | 120 | 172 | 53 | 105 | 7.18e-21 | 93.2 |
| Msa1245430 | MtrunA17_Chr3g0117601 | 53.521 | 71 | 32 | 1 | 99 | 168 | 41 | 111 | 7.28e-21 | 93.2 |
| Msa1245430 | MtrunA17_Chr2g0282511 | 68.000 | 50 | 16 | 0 | 117 | 166 | 44 | 93 | 1.08e-20 | 92.4 |
| Msa1245430 | MtrunA17_Chr1g0177251 | 62.963 | 54 | 20 | 0 | 120 | 173 | 14 | 67 | 1.25e-20 | 91.7 |
| Msa1245430 | MtrunA17_Chr2g0282441 | 68.000 | 50 | 16 | 0 | 120 | 169 | 27 | 76 | 1.25e-20 | 92.4 |
| Msa1245430 | MtrunA17_Chr4g0047761 | 65.455 | 55 | 18 | 1 | 118 | 172 | 72 | 125 | 1.78e-20 | 92.0 |
| Msa1245430 | MtrunA17_Chr2g0282051 | 66.038 | 53 | 17 | 1 | 120 | 172 | 48 | 99 | 2.44e-20 | 90.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1245430 | AT5G39660.3 | 37.346 | 407 | 183 | 15 | 69 | 444 | 91 | 456 | 1.28e-61 | 207 |
| Msa1245430 | AT5G39660.1 | 37.346 | 407 | 183 | 15 | 69 | 444 | 91 | 456 | 1.28e-61 | 207 |
| Msa1245430 | AT5G39660.2 | 37.346 | 407 | 183 | 15 | 69 | 444 | 91 | 456 | 1.28e-61 | 207 |
| Msa1245430 | AT3G47500.1 | 37.270 | 381 | 175 | 17 | 105 | 445 | 92 | 448 | 5.72e-58 | 197 |
| Msa1245430 | AT1G69570.1 | 28.814 | 472 | 224 | 14 | 9 | 445 | 3 | 397 | 3.42e-44 | 159 |
| Msa1245430 | AT1G26790.1 | 29.446 | 343 | 160 | 13 | 111 | 445 | 104 | 372 | 2.21e-35 | 135 |
| Msa1245430 | AT1G29160.1 | 69.863 | 73 | 22 | 0 | 99 | 171 | 43 | 115 | 4.92e-34 | 125 |
| Msa1245430 | AT5G62430.1 | 70.130 | 77 | 22 | 1 | 95 | 171 | 32 | 107 | 6.73e-34 | 129 |
| Msa1245430 | AT5G62430.1 | 42.308 | 104 | 40 | 4 | 350 | 445 | 207 | 298 | 8.29e-12 | 66.2 |
| Msa1245430 | AT2G34140.1 | 76.667 | 60 | 14 | 0 | 112 | 171 | 52 | 111 | 2.75e-32 | 121 |
| Msa1245430 | AT5G60850.1 | 66.667 | 69 | 21 | 1 | 118 | 186 | 51 | 117 | 1.86e-26 | 108 |
| Msa1245430 | AT3G55370.1 | 68.333 | 60 | 19 | 0 | 114 | 173 | 72 | 131 | 5.85e-25 | 105 |
| Msa1245430 | AT3G55370.2 | 68.333 | 60 | 19 | 0 | 114 | 173 | 72 | 131 | 6.98e-25 | 105 |
| Msa1245430 | AT3G55370.3 | 68.333 | 60 | 19 | 0 | 114 | 173 | 117 | 176 | 9.17e-25 | 105 |
| Msa1245430 | AT1G51700.1 | 68.421 | 57 | 17 | 1 | 118 | 173 | 33 | 89 | 1.69e-24 | 100 |
| Msa1245430 | AT2G37590.1 | 65.000 | 60 | 21 | 0 | 114 | 173 | 85 | 144 | 2.07e-24 | 103 |
| Msa1245430 | AT2G28810.2 | 69.643 | 56 | 17 | 0 | 114 | 169 | 73 | 128 | 2.77e-24 | 103 |
| Msa1245430 | AT2G28810.1 | 69.643 | 56 | 17 | 0 | 114 | 169 | 90 | 145 | 4.87e-24 | 102 |
| Msa1245430 | AT3G45610.1 | 51.948 | 77 | 32 | 1 | 102 | 173 | 19 | 95 | 5.94e-24 | 100 |
| Msa1245430 | AT5G60200.1 | 61.667 | 60 | 23 | 0 | 114 | 173 | 51 | 110 | 1.04e-23 | 100 |
| Msa1245430 | AT3G61850.2 | 51.765 | 85 | 39 | 1 | 113 | 195 | 57 | 141 | 1.47e-23 | 100 |
| Msa1245430 | AT3G61850.3 | 51.765 | 85 | 39 | 1 | 113 | 195 | 57 | 141 | 1.47e-23 | 100 |
| Msa1245430 | AT5G65590.1 | 51.685 | 89 | 40 | 1 | 85 | 173 | 11 | 96 | 1.61e-23 | 100 |
| Msa1245430 | AT3G61850.1 | 51.765 | 85 | 39 | 1 | 113 | 195 | 69 | 153 | 1.65e-23 | 100 |
| Msa1245430 | AT1G07640.1 | 69.091 | 55 | 17 | 0 | 118 | 172 | 21 | 75 | 1.82e-23 | 99.8 |
| Msa1245430 | AT3G50410.1 | 50.000 | 80 | 30 | 1 | 103 | 172 | 5 | 84 | 2.02e-23 | 99.4 |
| Msa1245430 | AT4G38000.1 | 68.966 | 58 | 17 | 1 | 117 | 174 | 40 | 96 | 2.17e-23 | 99.0 |
| Msa1245430 | AT3G21270.1 | 69.811 | 53 | 16 | 0 | 118 | 170 | 29 | 81 | 2.19e-23 | 97.8 |
| Msa1245430 | AT3G61850.5 | 51.765 | 85 | 39 | 1 | 113 | 195 | 57 | 141 | 2.34e-23 | 100 |
| Msa1245430 | AT3G61850.4 | 51.765 | 85 | 39 | 1 | 113 | 195 | 69 | 153 | 2.59e-23 | 100 |
| Msa1245430 | AT1G07640.2 | 69.091 | 55 | 17 | 0 | 118 | 172 | 77 | 131 | 3.46e-23 | 100 |
| Msa1245430 | AT1G07640.3 | 69.091 | 55 | 17 | 0 | 118 | 172 | 85 | 139 | 4.08e-23 | 100 |
| Msa1245430 | AT4G24060.1 | 56.061 | 66 | 29 | 0 | 107 | 172 | 42 | 107 | 6.14e-23 | 99.8 |
| Msa1245430 | AT5G02460.1 | 66.102 | 59 | 20 | 0 | 114 | 172 | 91 | 149 | 6.52e-23 | 100 |
| Msa1245430 | AT1G64620.1 | 69.231 | 52 | 16 | 0 | 115 | 166 | 46 | 97 | 1.65e-22 | 98.6 |
| Msa1245430 | AT4G00940.1 | 58.462 | 65 | 27 | 0 | 113 | 177 | 63 | 127 | 3.75e-22 | 96.7 |
| Msa1245430 | AT4G00940.3 | 58.462 | 65 | 27 | 0 | 113 | 177 | 63 | 127 | 3.75e-22 | 96.7 |
| Msa1245430 | AT4G00940.2 | 58.462 | 65 | 27 | 0 | 113 | 177 | 63 | 127 | 3.75e-22 | 96.7 |
| Msa1245430 | AT2G28510.1 | 68.519 | 54 | 17 | 0 | 120 | 173 | 50 | 103 | 5.00e-22 | 96.3 |
| Msa1245430 | AT1G47655.1 | 69.388 | 49 | 15 | 0 | 118 | 166 | 29 | 77 | 1.15e-21 | 93.2 |
| Msa1245430 | AT1G28310.1 | 65.455 | 55 | 19 | 0 | 118 | 172 | 27 | 81 | 1.45e-21 | 95.1 |
| Msa1245430 | AT1G28310.2 | 65.455 | 55 | 19 | 0 | 118 | 172 | 51 | 105 | 2.07e-21 | 95.1 |
| Msa1245430 | AT5G66940.1 | 60.000 | 55 | 22 | 0 | 118 | 172 | 32 | 86 | 4.17e-21 | 92.0 |
| Msa1245430 | AT4G21050.1 | 44.944 | 89 | 47 | 1 | 105 | 191 | 11 | 99 | 4.65e-21 | 91.7 |
| Msa1245430 | AT2G46590.1 | 64.151 | 53 | 19 | 0 | 113 | 165 | 63 | 115 | 1.14e-20 | 93.6 |
| Msa1245430 | AT2G46590.2 | 64.151 | 53 | 19 | 0 | 113 | 165 | 75 | 127 | 1.24e-20 | 93.6 |
| Msa1245430 | AT3G52440.1 | 62.264 | 53 | 20 | 0 | 120 | 172 | 27 | 79 | 2.17e-20 | 90.5 |
| Msa1245430 | AT3G52440.2 | 62.264 | 53 | 20 | 0 | 120 | 172 | 46 | 98 | 2.51e-20 | 90.9 |
| Msa1245430 | AT1G21340.1 | 61.111 | 54 | 21 | 0 | 120 | 173 | 40 | 93 | 3.70e-20 | 90.1 |
| Msa1245430 | AT5G62940.1 | 65.306 | 49 | 17 | 0 | 120 | 168 | 75 | 123 | 1.92e-19 | 90.1 |
| Msa1245430 | AT4G21040.1 | 67.347 | 49 | 16 | 0 | 120 | 168 | 27 | 75 | 4.25e-18 | 83.6 |
| Msa1245430 | AT4G21080.1 | 65.306 | 49 | 17 | 0 | 120 | 168 | 27 | 75 | 2.19e-17 | 82.0 |
| Msa1245430 | AT4G21030.1 | 50.769 | 65 | 25 | 2 | 106 | 163 | 2 | 66 | 1.85e-12 | 66.6 |
Find 97 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGGGGTTGTATGCCAAAT+TGG | 0.209941 | 8_2:-35532927 | Msa1245430:CDS |
| AAAACACTTCCTTTCATAAT+AGG | 0.219092 | 8_2:+35532658 | None:intergenic |
| ATACAGTGAAGCCGAATATT+TGG | 0.219567 | 8_2:-35532771 | Msa1245430:CDS |
| TCCATTTGGCCAACCCAATT+TGG | 0.234208 | 8_2:+35532913 | None:intergenic |
| GGACTTGAAGTTATGTTATC+AGG | 0.270788 | 8_2:+35532991 | None:intergenic |
| ACCGATGACACCTTCATATT+GGG | 0.274088 | 8_2:-35532944 | Msa1245430:CDS |
| TTGCTTATTTCTACGCTTAC+CGG | 0.293241 | 8_2:+35533365 | None:intergenic |
| GGTAATAGGTCACCAACTTT+AGG | 0.303102 | 8_2:-35532829 | Msa1245430:CDS |
| GGACAGCTGGTGGAGTAATT+AGG | 0.315052 | 8_2:-35533404 | Msa1245430:CDS |
| TTGATTGTCAGCATCTCTTT+TGG | 0.322651 | 8_2:+35533560 | None:intergenic |
| TACCGATGACACCTTCATAT+TGG | 0.324325 | 8_2:-35532945 | Msa1245430:CDS |
| TTGTGGATTAGCTTGTTTGC+TGG | 0.351583 | 8_2:+35533674 | None:intergenic |
| GAACTCTTAGCAGCCTCTTC+CGG | 0.361876 | 8_2:+35532721 | None:intergenic |
| GTGGTACTTGTTCCGGTAAT+AGG | 0.368265 | 8_2:-35532843 | Msa1245430:CDS |
| GGACACGGCAGAACCTTATC+TGG | 0.373778 | 8_2:+35533519 | None:intergenic |
| GCCAAATTGGGTTGGCCAAA+TGG | 0.379899 | 8_2:-35532914 | Msa1245430:CDS |
| GCTAGCAGTGGTACTTGTTC+CGG | 0.387977 | 8_2:-35532850 | Msa1245430:CDS |
| GAAAGTGGAATAGAGCATAT+TGG | 0.393412 | 8_2:-35533120 | Msa1245430:CDS |
| CATTCCATCCCCTTCATCTT+CGG | 0.395248 | 8_2:-35532872 | Msa1245430:CDS |
| CTAACGATAATTCTTCCATT+TGG | 0.397249 | 8_2:+35532899 | None:intergenic |
| GTACCGGTATTGCACATGTT+TGG | 0.404206 | 8_2:+35533633 | None:intergenic |
| ATTAGTTCTATGAACTGCTT+TGG | 0.409555 | 8_2:+35533596 | None:intergenic |
| GTAATTAGGAATGTTCCTAT+TGG | 0.410965 | 8_2:-35533390 | Msa1245430:CDS |
| TCTACTGCCATCATGGTTGC+AGG | 0.411890 | 8_2:+35532970 | None:intergenic |
| GGTACTGCATCAAGGGTAAC+AGG | 0.411943 | 8_2:+35533318 | None:intergenic |
| TACAGTGAAGCCGAATATTT+GGG | 0.412277 | 8_2:-35532770 | Msa1245430:CDS |
| CGAGAACTTGCATTTGACTT+AGG | 0.412589 | 8_2:+35532622 | None:intergenic |
| AGCTTCTGAATCCAAGGAAA+TGG | 0.414730 | 8_2:-35533151 | Msa1245430:CDS |
| CTACGCTTACCGGCTCCAAT+AGG | 0.417710 | 8_2:+35533375 | None:intergenic |
| TTCAGAATACTCCATTTCCT+TGG | 0.422020 | 8_2:+35533140 | None:intergenic |
| TAAAGTTGGTGACCTATTAC+CGG | 0.424336 | 8_2:+35532831 | None:intergenic |
| GTTTCTACCGATTCACTAAG+AGG | 0.436362 | 8_2:+35533264 | None:intergenic |
| CTATGAACTGCTTTGGTCAC+CGG | 0.437272 | 8_2:+35533603 | None:intergenic |
| GTGTCCTCGCTGCAATAGTT+TGG | 0.447623 | 8_2:-35533502 | Msa1245430:CDS |
| CACGCTTTCCTGAAAGGATC+CGG | 0.450006 | 8_2:+35532546 | None:intergenic |
| AGAAGCTCTCACAGAAGAGC+TGG | 0.450791 | 8_2:+35533167 | None:intergenic |
| GACTTATCCATGTTGGAATC+CGG | 0.451018 | 8_2:-35533025 | Msa1245430:CDS |
| CAATACCGGTACTTTGAAAC+CGG | 0.464327 | 8_2:-35533622 | Msa1245430:CDS |
| TTGGGGTTGTATGCCAAATT+GGG | 0.467016 | 8_2:-35532926 | Msa1245430:CDS |
| AACTATCAGAATTAATGATC+CGG | 0.479510 | 8_2:-35532740 | Msa1245430:CDS |
| CCGGAGCGAGAGAAAGCAGC+AGG | 0.481752 | 8_2:+35532565 | None:intergenic |
| ATTATTACTCTGCTCCTCCA+TGG | 0.483782 | 8_2:-35533047 | Msa1245430:CDS |
| ATTCCAAACATGTGCAATAC+CGG | 0.498808 | 8_2:-35533636 | Msa1245430:CDS |
| CGGTACTTCTACTGCCATCA+TGG | 0.503743 | 8_2:+35532963 | None:intergenic |
| TTAGGAAAACATTGTAGAGA+TGG | 0.504456 | 8_2:-35532811 | Msa1245430:CDS |
| GGAAGTTCCTCTTAGTGAAT+CGG | 0.506714 | 8_2:-35533271 | Msa1245430:CDS |
| GGTTGTATGCCAAATTGGGT+TGG | 0.508787 | 8_2:-35532922 | Msa1245430:CDS |
| TGTCAGAGGTATTGGACAGC+TGG | 0.509122 | 8_2:-35533417 | Msa1245430:CDS |
| AGAAACTGTGTTAAATCTCA+AGG | 0.509219 | 8_2:-35533247 | Msa1245430:CDS |
| AGGCTGCTAAGAGTTCTATA+TGG | 0.510382 | 8_2:-35532714 | Msa1245430:CDS |
| ACTAAGAGGAACTTCCTCCT+TGG | 0.511294 | 8_2:+35533278 | None:intergenic |
| CTCCATGGACTTATCCATGT+TGG | 0.511657 | 8_2:-35533032 | Msa1245430:CDS |
| CCTGCTGCTTTCTCTCGCTC+CGG | 0.514923 | 8_2:-35532565 | Msa1245430:CDS |
| GAAATGGAGTATTCTGAAAG+TGG | 0.522372 | 8_2:-35533135 | Msa1245430:CDS |
| CAGAATTAATGATCCGGAAG+AGG | 0.524329 | 8_2:-35532734 | Msa1245430:CDS |
| GGTCACCGGTTTCAAAGTAC+CGG | 0.526533 | 8_2:+35533617 | None:intergenic |
| CACTGCTAGCCGAAGATGAA+GGG | 0.530871 | 8_2:+35532863 | None:intergenic |
| AGGAATGTTCCTATTGGAGC+CGG | 0.533831 | 8_2:-35533384 | Msa1245430:CDS |
| GGCATACAACCCCAATATGA+AGG | 0.535682 | 8_2:+35532934 | None:intergenic |
| ATATTACACGCTTTCCTGAA+AGG | 0.538533 | 8_2:+35532540 | None:intergenic |
| TTGGAATCTATGTGTATGAC+AGG | 0.546648 | 8_2:+35533297 | None:intergenic |
| AATGAAAAGCATGACCATGA+TGG | 0.548748 | 8_2:+35534870 | None:intergenic |
| CCACTGCTAGCCGAAGATGA+AGG | 0.549382 | 8_2:+35532862 | None:intergenic |
| TGTGAGAGCTTCTGAATCCA+AGG | 0.559146 | 8_2:-35533157 | Msa1245430:CDS |
| TAATAATGAAGTGAATGTAA+AGG | 0.559539 | 8_2:+35533063 | None:intergenic |
| TTATCAGGCTTAAATGCCAC+CGG | 0.562271 | 8_2:+35533006 | None:intergenic |
| CAGAGGTATTGGACAGCTGG+TGG | 0.563331 | 8_2:-35533414 | Msa1245430:CDS |
| TGTCATACACATAGATTCCA+AGG | 0.569094 | 8_2:-35533295 | Msa1245430:CDS |
| TATGACAGGTACTGCATCAA+GGG | 0.571285 | 8_2:+35533311 | None:intergenic |
| TTCAAGTCCTGCAACCATGA+TGG | 0.572277 | 8_2:-35532977 | Msa1245430:CDS |
| CCCCAATATGAAGGTGTCAT+CGG | 0.575122 | 8_2:+35532943 | None:intergenic |
| CAGAACAAACCTATTATGAA+AGG | 0.575243 | 8_2:-35532667 | Msa1245430:CDS |
| AAACTATTGCAGCGAGGACA+CGG | 0.577128 | 8_2:+35533504 | None:intergenic |
| ATAGTATTAGCATCTTCTTG+TGG | 0.578337 | 8_2:+35533657 | None:intergenic |
| ACTTTGACACCACAATGCAA+TGG | 0.588024 | 8_2:-35533093 | Msa1245430:CDS |
| TTCCAACATGGATAAGTCCA+TGG | 0.593931 | 8_2:+35533030 | None:intergenic |
| GTATGACAGGTACTGCATCA+AGG | 0.597457 | 8_2:+35533310 | None:intergenic |
| TCCACATCAACAATCCATCA+TGG | 0.598956 | 8_2:-35534884 | Msa1245430:intron |
| ACCATGATGGATTGTTGATG+TGG | 0.602567 | 8_2:+35534883 | None:intergenic |
| CCGATGACACCTTCATATTG+GGG | 0.607080 | 8_2:-35532943 | Msa1245430:CDS |
| CTAGCCGAAGATGAAGGGGA+TGG | 0.608686 | 8_2:+35532868 | None:intergenic |
| CCTTCATCTTCGGCTAGCAG+TGG | 0.611094 | 8_2:-35532862 | Msa1245430:CDS |
| ATTACAATGTTAACCAACCA+AGG | 0.617440 | 8_2:-35533455 | Msa1245430:CDS |
| GGACTCTTCTACTGTCAAAG+AGG | 0.618008 | 8_2:-35533205 | Msa1245430:CDS |
| GAAACTGTGTTAAATCTCAA+GGG | 0.626874 | 8_2:-35533246 | Msa1245430:CDS |
| GTGAATCTGTGAATCTGTGG+TGG | 0.627558 | 8_2:+35534912 | None:intergenic |
| GGAATTAAGCCATTGCATTG+TGG | 0.632188 | 8_2:+35533084 | None:intergenic |
| ACTGCTAGCCGAAGATGAAG+GGG | 0.636553 | 8_2:+35532864 | None:intergenic |
| GGAACTTGACAATTCTGCAA+AGG | 0.639283 | 8_2:+35533339 | None:intergenic |
| AATGCCACCGGATTCCAACA+TGG | 0.642061 | 8_2:+35533018 | None:intergenic |
| CGGAGCGAGAGAAAGCAGCA+GGG | 0.655440 | 8_2:+35532566 | None:intergenic |
| TTATCCATGTTGGAATCCGG+TGG | 0.657026 | 8_2:-35533022 | Msa1245430:CDS |
| TGAATCTGTGAATCTGTGGT+GGG | 0.669351 | 8_2:+35534913 | None:intergenic |
| AGAGTGAATCTGTGAATCTG+TGG | 0.680020 | 8_2:+35534909 | None:intergenic |
| GTCTCCAAACTATTGCAGCG+AGG | 0.702604 | 8_2:+35533498 | None:intergenic |
| CAACATGGATAAGTCCATGG+AGG | 0.737932 | 8_2:+35533033 | None:intergenic |
| CATACACATAGATTCCAAGG+AGG | 0.765853 | 8_2:-35533292 | Msa1245430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATAAGAAAGATAAAA+AGG | + | chr8_2:35532711-35532730 | None:intergenic | 10.0% |
| !!! | TATCTTTCTTATATATTTTT+TGG | - | chr8_2:35532714-35532733 | Msa1245430:CDS | 10.0% |
| !! | AAAATGTTTATATTATAGCT+AGG | - | chr8_2:35532926-35532945 | Msa1245430:CDS | 15.0% |
| !! | ACAAAAAAATGAAATATGTT+AGG | - | chr8_2:35533343-35533362 | Msa1245430:CDS | 15.0% |
| !! | AAATCAATGTTATTATATAG+TGG | - | chr8_2:35533536-35533555 | Msa1245430:CDS | 15.0% |
| !!! | TTTCAATAAGTCAATATTTT+CGG | - | chr8_2:35533662-35533681 | Msa1245430:CDS | 15.0% |
| !! | GAAAGGAAAAAAAAAAATCT+GGG | + | chr8_2:35532793-35532812 | None:intergenic | 20.0% |
| !! | TGAAAGGAAAAAAAAAAATC+TGG | + | chr8_2:35532794-35532813 | None:intergenic | 20.0% |
| !! | ATTCGTATATATATAGTTCT+AGG | - | chr8_2:35532845-35532864 | Msa1245430:CDS | 20.0% |
| !!! | TGTTTGATAATTTGTTTTGA+AGG | - | chr8_2:35532959-35532978 | Msa1245430:CDS | 20.0% |
| !!! | GAATTATTTTTGTTTGAATC+TGG | - | chr8_2:35533038-35533057 | Msa1245430:CDS | 20.0% |
| !! | TGACATGAAAAATGTTAAAT+TGG | - | chr8_2:35533097-35533116 | Msa1245430:CDS | 20.0% |
| !! | TGTTCTATTTACTGTATTAT+TGG | - | chr8_2:35533138-35533157 | Msa1245430:CDS | 20.0% |
| !! | TAATCAAACAGTTAAAGAAT+AGG | + | chr8_2:35533441-35533460 | None:intergenic | 20.0% |
| !!! | TATTGACTTATTGAAATTAG+CGG | + | chr8_2:35533658-35533677 | None:intergenic | 20.0% |
| !! | TATCAATGAGTTATAACATT+TGG | - | chr8_2:35533721-35533740 | Msa1245430:CDS | 20.0% |
| !! | TAATAATGAAGTGAATGTAA+AGG | + | chr8_2:35534474-35534493 | None:intergenic | 20.0% |
| !!! | TCATTAATTCTGATAGTTTT+AGG | + | chr8_2:35534792-35534811 | None:intergenic | 20.0% |
| !!! | TTTTTTCCTTTCATACTGAA+TGG | - | chr8_2:35532801-35532820 | Msa1245430:CDS | 25.0% |
| !! | GTGTTACTATAGAAAATAAG+TGG | - | chr8_2:35533002-35533021 | Msa1245430:CDS | 25.0% |
| ! | TACTATAGAAAATAAGTGGT+AGG | - | chr8_2:35533006-35533025 | Msa1245430:CDS | 25.0% |
| ! | ACTATAGAAAATAAGTGGTA+GGG | - | chr8_2:35533007-35533026 | Msa1245430:CDS | 25.0% |
| !!! | TGAATCTGGTTTTTTTAAGT+TGG | - | chr8_2:35533052-35533071 | Msa1245430:CDS | 25.0% |
| ! | AAATTGGACCAAATTAATTG+AGG | - | chr8_2:35533113-35533132 | Msa1245430:CDS | 25.0% |
| ! | TAAACAATACCAATAACTCA+TGG | + | chr8_2:35533480-35533499 | None:intergenic | 25.0% |
| ! | TATTGGTATTGTTTAATCTG+TGG | - | chr8_2:35533485-35533504 | Msa1245430:CDS | 25.0% |
| ! | ATTGGTATTGTTTAATCTGT+GGG | - | chr8_2:35533486-35533505 | Msa1245430:CDS | 25.0% |
| ! | TGGTTATAGAGTAAAAGAAT+TGG | - | chr8_2:35533556-35533575 | Msa1245430:CDS | 25.0% |
| ! | TTGTACTAAATAATGTATCG+TGG | + | chr8_2:35533599-35533618 | None:intergenic | 25.0% |
| !! | ATTGATAGTATGCATTTCTA+CGG | + | chr8_2:35533708-35533727 | None:intergenic | 25.0% |
| ! | AACTATCAGAATTAATGATC+CGG | - | chr8_2:35534794-35534813 | Msa1245430:intron | 25.0% |
| ! | AAAACACTTCCTTTCATAAT+AGG | + | chr8_2:35534879-35534898 | None:intergenic | 25.0% |
| AAGGTGCAAAAAAGATGTAA+AGG | + | chr8_2:35532692-35532711 | None:intergenic | 30.0% | |
| CTATATCCATTCAGTATGAA+AGG | + | chr8_2:35532810-35532829 | None:intergenic | 30.0% | |
| TTCATACTGAATGGATATAG+AGG | - | chr8_2:35532810-35532829 | Msa1245430:CDS | 30.0% | |
| AGAACACACCTCAATTAATT+TGG | + | chr8_2:35533124-35533143 | None:intergenic | 30.0% | |
| CTGTATTATTGGAATATGTG+TGG | - | chr8_2:35533149-35533168 | Msa1245430:CDS | 30.0% | |
| ATAATTTCAGCCCAATTACT+CGG | + | chr8_2:35533179-35533198 | None:intergenic | 30.0% | |
| CACAAACGATTTATACTTAG+TGG | + | chr8_2:35533211-35533230 | None:intergenic | 30.0% | |
| CACTAAGTATAAATCGTTTG+TGG | - | chr8_2:35533209-35533228 | Msa1245430:CDS | 30.0% | |
| !!! | TTTTTTGTGTGTTAATCCTC+TGG | + | chr8_2:35533331-35533350 | None:intergenic | 30.0% |
| AGAGTAAAACCATGAGTTAT+TGG | - | chr8_2:35533468-35533487 | Msa1245430:CDS | 30.0% | |
| ! | TTGATAGTATGCATTTCTAC+GGG | + | chr8_2:35533707-35533726 | None:intergenic | 30.0% |
| TTAAAAAGACAGCTTGCATT+AGG | + | chr8_2:35533748-35533767 | None:intergenic | 30.0% | |
| ATAGTATTAGCATCTTCTTG+TGG | + | chr8_2:35533880-35533899 | None:intergenic | 30.0% | |
| !! | ATTAGTTCTATGAACTGCTT+TGG | + | chr8_2:35533941-35533960 | None:intergenic | 30.0% |
| ATTACAATGTTAACCAACCA+AGG | - | chr8_2:35534079-35534098 | Msa1245430:intron | 30.0% | |
| ATTTCTGCAAAAATTGTCAG+AGG | - | chr8_2:35534103-35534122 | Msa1245430:intron | 30.0% | |
| GTAATTAGGAATGTTCCTAT+TGG | - | chr8_2:35534144-35534163 | Msa1245430:intron | 30.0% | |
| AGAAACTGTGTTAAATCTCA+AGG | - | chr8_2:35534287-35534306 | Msa1245430:intron | 30.0% | |
| GAAACTGTGTTAAATCTCAA+GGG | - | chr8_2:35534288-35534307 | Msa1245430:intron | 30.0% | |
| ! | AGTCCGTTTCAATTTTTCTA+TGG | + | chr8_2:35534314-35534333 | None:intergenic | 30.0% |
| CTAACGATAATTCTTCCATT+TGG | + | chr8_2:35534638-35534657 | None:intergenic | 30.0% | |
| ! | CTACAATGTTTTCCTAAAGT+TGG | + | chr8_2:35534720-35534739 | None:intergenic | 30.0% |
| TTAGGAAAACATTGTAGAGA+TGG | - | chr8_2:35534723-35534742 | Msa1245430:intron | 30.0% | |
| CAGAACAAACCTATTATGAA+AGG | - | chr8_2:35534867-35534886 | Msa1245430:intron | 30.0% | |
| ! | GATCCTTCAATCAAGCTTTT+TGG | - | chr8_2:35532576-35532595 | Msa1245430:CDS | 35.0% |
| CTTCCAAAAAGCTTGATTGA+AGG | + | chr8_2:35532582-35532601 | None:intergenic | 35.0% | |
| ! | AATGAAAAGCATGACCATGA+TGG | + | chr8_2:35532667-35532686 | None:intergenic | 35.0% |
| ATCTGTGGGTATTTCATGTA+TGG | - | chr8_2:35533500-35533519 | Msa1245430:CDS | 35.0% | |
| ATTCCAAACATGTGCAATAC+CGG | - | chr8_2:35533898-35533917 | Msa1245430:intron | 35.0% | |
| ! | TTGATTGTCAGCATCTCTTT+TGG | + | chr8_2:35533977-35533996 | None:intergenic | 35.0% |
| !! | AGTTTTCAAGAAGCCAGATA+AGG | - | chr8_2:35534002-35534021 | Msa1245430:intron | 35.0% |
| ! | CAATTTTTGCAGAAATGCCT+TGG | + | chr8_2:35534099-35534118 | None:intergenic | 35.0% |
| ! | GCAAAAATTGTCAGAGGTAT+TGG | - | chr8_2:35534109-35534128 | Msa1245430:intron | 35.0% |
| !! | TTGCTTATTTCTACGCTTAC+CGG | + | chr8_2:35534172-35534191 | None:intergenic | 35.0% |
| TTGGAATCTATGTGTATGAC+AGG | + | chr8_2:35534240-35534259 | None:intergenic | 35.0% | |
| TGTCATACACATAGATTCCA+AGG | - | chr8_2:35534239-35534258 | Msa1245430:intron | 35.0% | |
| GGGCCATAGAAAAATTGAAA+CGG | - | chr8_2:35534308-35534327 | Msa1245430:intron | 35.0% | |
| TTCAGAATACTCCATTTCCT+TGG | + | chr8_2:35534397-35534416 | None:intergenic | 35.0% | |
| ! | GAAATGGAGTATTCTGAAAG+TGG | - | chr8_2:35534399-35534418 | Msa1245430:intron | 35.0% |
| GAAAGTGGAATAGAGCATAT+TGG | - | chr8_2:35534414-35534433 | Msa1245430:intron | 35.0% | |
| GGACTTGAAGTTATGTTATC+AGG | + | chr8_2:35534546-35534565 | None:intergenic | 35.0% | |
| !! | TAAAGTTGGTGACCTATTAC+CGG | + | chr8_2:35534706-35534725 | None:intergenic | 35.0% |
| ATACAGTGAAGCCGAATATT+TGG | - | chr8_2:35534763-35534782 | Msa1245430:intron | 35.0% | |
| TACAGTGAAGCCGAATATTT+GGG | - | chr8_2:35534764-35534783 | Msa1245430:intron | 35.0% | |
| !! | GTTTTAGGCACCCAAATATT+CGG | + | chr8_2:35534777-35534796 | None:intergenic | 35.0% |
| TGAATCTGTGAATCTGTGGT+GGG | + | chr8_2:35532624-35532643 | None:intergenic | 40.0% | |
| AGAGTGAATCTGTGAATCTG+TGG | + | chr8_2:35532628-35532647 | None:intergenic | 40.0% | |
| TCCACATCAACAATCCATCA+TGG | - | chr8_2:35532650-35532669 | Msa1245430:CDS | 40.0% | |
| !! | ACCATGATGGATTGTTGATG+TGG | + | chr8_2:35532654-35532673 | None:intergenic | 40.0% |
| TTCCTGAGTGGGATAATTCT+TGG | - | chr8_2:35533246-35533265 | Msa1245430:CDS | 40.0% | |
| GTCAGACTTTACTTACGTTC+TGG | - | chr8_2:35533268-35533287 | Msa1245430:CDS | 40.0% | |
| ! | GGTTCTAGTAATCCAGAGTT+CGG | + | chr8_2:35533294-35533313 | None:intergenic | 40.0% |
| ! | GTTAATCCTCTGGTTCCTAA+GGG | + | chr8_2:35533321-35533340 | None:intergenic | 40.0% |
| ! | TGTTAATCCTCTGGTTCCTA+AGG | + | chr8_2:35533322-35533341 | None:intergenic | 40.0% |
| GTATGTCAACTGACACAGTT+TGG | - | chr8_2:35533769-35533788 | Msa1245430:intron | 40.0% | |
| !! | TTGTGGATTAGCTTGTTTGC+TGG | + | chr8_2:35533863-35533882 | None:intergenic | 40.0% |
| !! | CAATACCGGTACTTTGAAAC+CGG | - | chr8_2:35533912-35533931 | Msa1245430:intron | 40.0% |
| ! | TTTTGCAGAAATGCCTTGGT+TGG | + | chr8_2:35534095-35534114 | None:intergenic | 40.0% |
| GGAACTTGACAATTCTGCAA+AGG | + | chr8_2:35534198-35534217 | None:intergenic | 40.0% | |
| ! | TATGACAGGTACTGCATCAA+GGG | + | chr8_2:35534226-35534245 | None:intergenic | 40.0% |
| CATACACATAGATTCCAAGG+AGG | - | chr8_2:35534242-35534261 | Msa1245430:intron | 40.0% | |
| GGAAGTTCCTCTTAGTGAAT+CGG | - | chr8_2:35534263-35534282 | Msa1245430:intron | 40.0% | |
| !! | GTTTCTACCGATTCACTAAG+AGG | + | chr8_2:35534273-35534292 | None:intergenic | 40.0% |
| AGCTTCTGAATCCAAGGAAA+TGG | - | chr8_2:35534383-35534402 | Msa1245430:intron | 40.0% | |
| ACTTTGACACCACAATGCAA+TGG | - | chr8_2:35534441-35534460 | Msa1245430:intron | 40.0% | |
| GGAATTAAGCCATTGCATTG+TGG | + | chr8_2:35534453-35534472 | None:intergenic | 40.0% | |
| ATTATTACTCTGCTCCTCCA+TGG | - | chr8_2:35534487-35534506 | Msa1245430:intron | 40.0% | |
| TTCCAACATGGATAAGTCCA+TGG | + | chr8_2:35534507-35534526 | None:intergenic | 40.0% | |
| GACTTATCCATGTTGGAATC+CGG | - | chr8_2:35534509-35534528 | Msa1245430:intron | 40.0% | |
| TTATCAGGCTTAAATGCCAC+CGG | + | chr8_2:35534531-35534550 | None:intergenic | 40.0% | |
| TACCGATGACACCTTCATAT+TGG | - | chr8_2:35534589-35534608 | Msa1245430:intron | 40.0% | |
| ACCGATGACACCTTCATATT+GGG | - | chr8_2:35534590-35534609 | Msa1245430:intron | 40.0% | |
| ATTGGGGTTGTATGCCAAAT+TGG | - | chr8_2:35534607-35534626 | Msa1245430:intron | 40.0% | |
| TTGGGGTTGTATGCCAAATT+GGG | - | chr8_2:35534608-35534627 | Msa1245430:intron | 40.0% | |
| GGTAATAGGTCACCAACTTT+AGG | - | chr8_2:35534705-35534724 | Msa1245430:intron | 40.0% | |
| CAGAATTAATGATCCGGAAG+AGG | - | chr8_2:35534800-35534819 | Msa1245430:intron | 40.0% | |
| AGGCTGCTAAGAGTTCTATA+TGG | - | chr8_2:35534820-35534839 | Msa1245430:intron | 40.0% | |
| ! | CGAGAACTTGCATTTGACTT+AGG | + | chr8_2:35534915-35534934 | None:intergenic | 40.0% |
| GTGAATCTGTGAATCTGTGG+TGG | + | chr8_2:35532625-35532644 | None:intergenic | 45.0% | |
| TGTGTGGTTGACCGAGTAAT+TGG | - | chr8_2:35533165-35533184 | Msa1245430:CDS | 45.0% | |
| GTGTGGTTGACCGAGTAATT+GGG | - | chr8_2:35533166-35533185 | Msa1245430:CDS | 45.0% | |
| ATCTGAGTTCGATTCCTGAG+TGG | - | chr8_2:35533234-35533253 | Msa1245430:CDS | 45.0% | |
| TCTGAGTTCGATTCCTGAGT+GGG | - | chr8_2:35533235-35533254 | Msa1245430:CDS | 45.0% | |
| GACCAAGAATTATCCCACTC+AGG | + | chr8_2:35533251-35533270 | None:intergenic | 45.0% | |
| TTACTAGAACCCCTTCCCTT+AGG | - | chr8_2:35533303-35533322 | Msa1245430:CDS | 45.0% | |
| TTTGGTACTCGACTGCAGAA+TGG | - | chr8_2:35533787-35533806 | Msa1245430:intron | 45.0% | |
| ! | GTACCGGTATTGCACATGTT+TGG | + | chr8_2:35533904-35533923 | None:intergenic | 45.0% |
| CTATGAACTGCTTTGGTCAC+CGG | + | chr8_2:35533934-35533953 | None:intergenic | 45.0% | |
| AAACTATTGCAGCGAGGACA+CGG | + | chr8_2:35534033-35534052 | None:intergenic | 45.0% | |
| AGGAATGTTCCTATTGGAGC+CGG | - | chr8_2:35534150-35534169 | Msa1245430:intron | 45.0% | |
| ! | GTATGACAGGTACTGCATCA+AGG | + | chr8_2:35534227-35534246 | None:intergenic | 45.0% |
| ACTAAGAGGAACTTCCTCCT+TGG | + | chr8_2:35534259-35534278 | None:intergenic | 45.0% | |
| GGACTCTTCTACTGTCAAAG+AGG | - | chr8_2:35534329-35534348 | Msa1245430:intron | 45.0% | |
| TGTGAGAGCTTCTGAATCCA+AGG | - | chr8_2:35534377-35534396 | Msa1245430:intron | 45.0% | |
| CAACATGGATAAGTCCATGG+AGG | + | chr8_2:35534504-35534523 | None:intergenic | 45.0% | |
| CTCCATGGACTTATCCATGT+TGG | - | chr8_2:35534502-35534521 | Msa1245430:intron | 45.0% | |
| TTATCCATGTTGGAATCCGG+TGG | - | chr8_2:35534512-35534531 | Msa1245430:intron | 45.0% | |
| TTCAAGTCCTGCAACCATGA+TGG | - | chr8_2:35534557-35534576 | Msa1245430:intron | 45.0% | |
| !! | CCCCAATATGAAGGTGTCAT+CGG | + | chr8_2:35534594-35534613 | None:intergenic | 45.0% |
| CCGATGACACCTTCATATTG+GGG | - | chr8_2:35534591-35534610 | Msa1245430:intron | 45.0% | |
| GGCATACAACCCCAATATGA+AGG | + | chr8_2:35534603-35534622 | None:intergenic | 45.0% | |
| GGTTGTATGCCAAATTGGGT+TGG | - | chr8_2:35534612-35534631 | Msa1245430:intron | 45.0% | |
| TCCATTTGGCCAACCCAATT+TGG | + | chr8_2:35534624-35534643 | None:intergenic | 45.0% | |
| CATTCCATCCCCTTCATCTT+CGG | - | chr8_2:35534662-35534681 | Msa1245430:intron | 45.0% | |
| GTGGTACTTGTTCCGGTAAT+AGG | - | chr8_2:35534691-35534710 | Msa1245430:intron | 45.0% | |
| ! | TCCTCTGGTTCCTAAGGGAA+GGG | + | chr8_2:35533316-35533335 | None:intergenic | 50.0% |
| ! | ATCCTCTGGTTCCTAAGGGA+AGG | + | chr8_2:35533317-35533336 | None:intergenic | 50.0% |
| !! | GGTCACCGGTTTCAAAGTAC+CGG | + | chr8_2:35533920-35533939 | None:intergenic | 50.0% |
| GTGTCCTCGCTGCAATAGTT+TGG | - | chr8_2:35534032-35534051 | Msa1245430:intron | 50.0% | |
| GTCTCCAAACTATTGCAGCG+AGG | + | chr8_2:35534039-35534058 | None:intergenic | 50.0% | |
| !! | TGTCAGAGGTATTGGACAGC+TGG | - | chr8_2:35534117-35534136 | Msa1245430:intron | 50.0% |
| GGACAGCTGGTGGAGTAATT+AGG | - | chr8_2:35534130-35534149 | Msa1245430:intron | 50.0% | |
| GGTACTGCATCAAGGGTAAC+AGG | + | chr8_2:35534219-35534238 | None:intergenic | 50.0% | |
| AGAAGCTCTCACAGAAGAGC+TGG | + | chr8_2:35534370-35534389 | None:intergenic | 50.0% | |
| AATGCCACCGGATTCCAACA+TGG | + | chr8_2:35534519-35534538 | None:intergenic | 50.0% | |
| TCTACTGCCATCATGGTTGC+AGG | + | chr8_2:35534567-35534586 | None:intergenic | 50.0% | |
| CGGTACTTCTACTGCCATCA+TGG | + | chr8_2:35534574-35534593 | None:intergenic | 50.0% | |
| !! | GCCAAATTGGGTTGGCCAAA+TGG | - | chr8_2:35534620-35534639 | Msa1245430:intron | 50.0% |
| ACTGCTAGCCGAAGATGAAG+GGG | + | chr8_2:35534673-35534692 | None:intergenic | 50.0% | |
| CACTGCTAGCCGAAGATGAA+GGG | + | chr8_2:35534674-35534693 | None:intergenic | 50.0% | |
| GCTAGCAGTGGTACTTGTTC+CGG | - | chr8_2:35534684-35534703 | Msa1245430:intron | 50.0% | |
| GAACTCTTAGCAGCCTCTTC+CGG | + | chr8_2:35534816-35534835 | None:intergenic | 50.0% | |
| CACGCTTTCCTGAAAGGATC+CGG | + | chr8_2:35534991-35535010 | None:intergenic | 50.0% | |
| CTTACGTTCTGGCCGAACTC+TGG | - | chr8_2:35533279-35533298 | Msa1245430:CDS | 55.0% | |
| ! | CCTCTGGTTCCTAAGGGAAG+GGG | + | chr8_2:35533315-35533334 | None:intergenic | 55.0% |
| GGACACGGCAGAACCTTATC+TGG | + | chr8_2:35534018-35534037 | None:intergenic | 55.0% | |
| !! | CAGAGGTATTGGACAGCTGG+TGG | - | chr8_2:35534120-35534139 | Msa1245430:intron | 55.0% |
| !! | CTACGCTTACCGGCTCCAAT+AGG | + | chr8_2:35534162-35534181 | None:intergenic | 55.0% |
| CTAGCCGAAGATGAAGGGGA+TGG | + | chr8_2:35534669-35534688 | None:intergenic | 55.0% | |
| CCACTGCTAGCCGAAGATGA+AGG | + | chr8_2:35534675-35534694 | None:intergenic | 55.0% | |
| CCTTCATCTTCGGCTAGCAG+TGG | - | chr8_2:35534672-35534691 | Msa1245430:intron | 55.0% | |
| CCCCTTCCCTTAGGAACCAG+AGG | - | chr8_2:35533312-35533331 | Msa1245430:CDS | 60.0% | |
| CGGAGCGAGAGAAAGCAGCA+GGG | + | chr8_2:35534971-35534990 | None:intergenic | 60.0% | |
| !! | CCTGCTGCTTTCTCTCGCTC+CGG | - | chr8_2:35534969-35534988 | Msa1245430:CDS | 60.0% |
| CTCTCGCTCCGGATCCTTTC+AGG | - | chr8_2:35534980-35534999 | Msa1245430:CDS | 60.0% | |
| CCGGAGCGAGAGAAAGCAGC+AGG | + | chr8_2:35534972-35534991 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 35532543 | 35535013 | 35532543 | ID=Msa1245430;Name=Msa1245430 |
| chr8_2 | mRNA | 35532543 | 35535013 | 35532543 | ID=Msa1245430-mRNA-1;Parent=Msa1245430;Name=Msa1245430-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|1|0|1|1|1|2|0|445 |
| chr8_2 | exon | 35534885 | 35535013 | 35534885 | ID=Msa1245430-mRNA-1:exon:11260;Parent=Msa1245430-mRNA-1 |
| chr8_2 | exon | 35532543 | 35533751 | 35532543 | ID=Msa1245430-mRNA-1:exon:11259;Parent=Msa1245430-mRNA-1 |
| chr8_2 | CDS | 35534885 | 35535013 | 35534885 | ID=Msa1245430-mRNA-1:cds;Parent=Msa1245430-mRNA-1 |
| chr8_2 | CDS | 35532543 | 35533751 | 35532543 | ID=Msa1245430-mRNA-1:cds;Parent=Msa1245430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
