Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1248180 | XP_013445809.1 | 76.721 | 305 | 30 | 4 | 1 | 293 | 1 | 276 | 4.79e-154 | 442 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1248180 | sp|O48686|SNL3_ARATH | 30.412 | 194 | 120 | 5 | 64 | 255 | 178 | 358 | 5.64e-15 | 79.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1248180 | A0A072U246 | 76.721 | 305 | 30 | 4 | 1 | 293 | 1 | 276 | 2.29e-154 | 442 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1248180 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1248180 | MtrunA17_Chr8g0362641 | 76.721 | 305 | 30 | 4 | 1 | 293 | 1 | 276 | 4.40e-158 | 442 |
| Msa1248180 | MtrunA17_Chr8g0364231 | 55.814 | 86 | 37 | 1 | 172 | 256 | 325 | 410 | 3.50e-22 | 96.7 |
| Msa1248180 | MtrunA17_Chr8g0364231 | 44.118 | 102 | 49 | 1 | 84 | 177 | 304 | 405 | 1.55e-17 | 83.2 |
| Msa1248180 | MtrunA17_Chr5g0415031 | 32.000 | 200 | 114 | 3 | 65 | 262 | 225 | 404 | 2.15e-18 | 85.5 |
| Msa1248180 | MtrunA17_Chr6g0452021 | 38.346 | 133 | 77 | 2 | 58 | 189 | 229 | 357 | 9.82e-18 | 83.2 |
| Msa1248180 | MtrunA17_Chr6g0452021 | 47.222 | 72 | 38 | 0 | 185 | 256 | 278 | 349 | 4.52e-14 | 72.0 |
| Msa1248180 | MtrunA17_Chr6g0452001 | 43.182 | 88 | 50 | 0 | 169 | 256 | 329 | 416 | 2.59e-15 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1248180 | AT1G24190.3 | 30.412 | 194 | 120 | 5 | 64 | 255 | 178 | 358 | 4.59e-16 | 79.0 |
| Msa1248180 | AT1G24190.2 | 31.443 | 194 | 118 | 6 | 64 | 255 | 178 | 358 | 5.52e-16 | 79.0 |
| Msa1248180 | AT1G24190.1 | 30.412 | 194 | 120 | 5 | 64 | 255 | 178 | 358 | 5.73e-16 | 79.0 |
| Msa1248180 | AT5G15020.2 | 31.217 | 189 | 100 | 5 | 64 | 249 | 236 | 397 | 4.27e-14 | 73.2 |
| Msa1248180 | AT5G15020.2 | 43.662 | 71 | 40 | 0 | 106 | 176 | 328 | 398 | 1.33e-11 | 65.5 |
| Msa1248180 | AT5G15020.1 | 31.217 | 189 | 100 | 5 | 64 | 249 | 236 | 397 | 4.36e-14 | 73.2 |
| Msa1248180 | AT5G15020.1 | 43.662 | 71 | 40 | 0 | 106 | 176 | 328 | 398 | 1.41e-11 | 65.5 |
| Msa1248180 | AT3G01320.1 | 38.462 | 91 | 56 | 0 | 159 | 249 | 311 | 401 | 1.69e-13 | 71.2 |
| Msa1248180 | AT3G01320.1 | 43.662 | 71 | 40 | 0 | 106 | 176 | 332 | 402 | 2.42e-11 | 64.7 |
| Msa1248180 | AT1G70060.2 | 46.479 | 71 | 37 | 1 | 185 | 255 | 305 | 374 | 3.47e-13 | 70.5 |
| Msa1248180 | AT1G70060.1 | 46.479 | 71 | 37 | 1 | 185 | 255 | 305 | 374 | 3.47e-13 | 70.5 |
| Msa1248180 | AT3G01320.2 | 50.000 | 66 | 33 | 0 | 184 | 249 | 324 | 389 | 1.09e-12 | 68.9 |
| Msa1248180 | AT3G01320.2 | 41.250 | 80 | 47 | 0 | 97 | 176 | 311 | 390 | 2.82e-12 | 67.8 |
Find 57 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAACAGGTGTATGATTTAT+TGG | 0.108276 | 8_2:-41796406 | Msa1248180:intron |
| CCAACAGGTGTATGATTTAT+TGG | 0.108276 | 8_2:-41796759 | Msa1248180:intron |
| CCGAGGGGAATTACAATTAT+TGG | 0.167850 | 8_2:-41797233 | Msa1248180:intron |
| ATCAAACCTTTGTTAAATTC+TGG | 0.224271 | 8_2:+41798783 | None:intergenic |
| GGGAAAATATACCGATCTTA+TGG | 0.254179 | 8_2:-41796385 | Msa1248180:CDS |
| ATGATCACCTTGAAAATCTT+TGG | 0.260962 | 8_2:+41798830 | None:intergenic |
| GTCAGCAACATCATTATCTT+TGG | 0.273735 | 8_2:+41801180 | None:intergenic |
| CTTCAAAGCTTTAACAAGTA+TGG | 0.279212 | 8_2:+41796673 | None:intergenic |
| CTTCAAAGCTTTAACAAGTT+TGG | 0.280216 | 8_2:+41796320 | None:intergenic |
| GGTAGATAGCGTGGGGCGTT+TGG | 0.285623 | 8_2:+41801144 | None:intergenic |
| CAACAGGTGTATGATTTATT+GGG | 0.288556 | 8_2:-41796405 | Msa1248180:intron |
| CAACAGGTGTATGATTTATT+GGG | 0.288556 | 8_2:-41796758 | Msa1248180:intron |
| AAGCGATCCTGAAAATTATC+AGG | 0.326328 | 8_2:-41797299 | Msa1248180:CDS |
| TTGAAAATCTTTGGCCTTCT+CGG | 0.337469 | 8_2:+41798839 | None:intergenic |
| GTAGATAGCGTGGGGCGTTT+GGG | 0.339140 | 8_2:+41801145 | None:intergenic |
| CAAACTTGTTAAAGCTTTGA+AGG | 0.370862 | 8_2:-41796319 | Msa1248180:CDS |
| GGGAAAATATACCGGTCTTA+TGG | 0.374164 | 8_2:-41796738 | Msa1248180:CDS |
| TTCATTAGGAATTTGTTTGT+TGG | 0.388637 | 8_2:-41798870 | Msa1248180:intron |
| CCCTCGGGTAATTAATTCTC+TGG | 0.410137 | 8_2:+41797249 | None:intergenic |
| GGAAAATATACCGATCTTAT+GGG | 0.412448 | 8_2:-41796384 | Msa1248180:CDS |
| ACCTCTCTGTGACTTTGTTA+AGG | 0.415223 | 8_2:+41798485 | None:intergenic |
| CTTTCAGATAGGCGATTTGT+TGG | 0.441089 | 8_2:-41798136 | Msa1248180:intron |
| TTCCCATTCTGTAGCTATGT+AGG | 0.447539 | 8_2:+41798425 | None:intergenic |
| TCCCATTCTGTAGCTATGTA+GGG | 0.475220 | 8_2:+41798426 | None:intergenic |
| TTCTTGAAACAGAAATGAAA+AGG | 0.481600 | 8_2:-41801204 | None:intergenic |
| AAGGTAAGAAAACGCTTCAC+TGG | 0.486508 | 8_2:+41798504 | None:intergenic |
| GCGATCACCTTTCGTATCAA+TGG | 0.487977 | 8_2:+41798722 | None:intergenic |
| GTCCCTACATAGCTACAGAA+TGG | 0.496961 | 8_2:-41798428 | Msa1248180:CDS |
| TTTCAGATAGGCGATTTGTT+GGG | 0.503365 | 8_2:-41798135 | Msa1248180:intron |
| ATTCTCTGGCATAGATATGA+AGG | 0.508252 | 8_2:+41797263 | None:intergenic |
| GTCTTGTGTGGTAGATAGCG+TGG | 0.509840 | 8_2:+41801135 | None:intergenic |
| GATTTATTGGGAAAATATAC+CGG | 0.511793 | 8_2:-41796746 | Msa1248180:CDS |
| TCCCTACATAGCTACAGAAT+GGG | 0.512003 | 8_2:-41798427 | Msa1248180:CDS |
| ATTAAATTCGTCCATAAGAC+CGG | 0.517902 | 8_2:+41796727 | None:intergenic |
| AACAAAGTCACAGAGAGGTT+AGG | 0.530375 | 8_2:-41798481 | Msa1248180:CDS |
| ATTAAATTCTCCCATAAGAT+CGG | 0.538735 | 8_2:+41796374 | None:intergenic |
| CAATAATTGTAATTCCCCTC+GGG | 0.543875 | 8_2:+41797234 | None:intergenic |
| AAACTTGTTAAAGCTTTGAA+GGG | 0.547893 | 8_2:-41796318 | Msa1248180:CDS |
| CCAATAATTGTAATTCCCCT+CGG | 0.549434 | 8_2:+41797233 | None:intergenic |
| GGGAAAACATTCCGATCTTG+TGG | 0.549779 | 8_2:-41798115 | Msa1248180:CDS |
| TCTTGTGTGGTAGATAGCGT+GGG | 0.549867 | 8_2:+41801136 | None:intergenic |
| ATTAAATCCCTCCACAAGAT+CGG | 0.550656 | 8_2:+41798104 | None:intergenic |
| CGTGATCCAGAATTTAACAA+AGG | 0.563643 | 8_2:-41798789 | Msa1248180:intron |
| TTGACACAATGTGAATCCAA+TGG | 0.569616 | 8_2:-41798075 | Msa1248180:intron |
| TGTTGGATTGAGTACCGAGA+AGG | 0.588140 | 8_2:-41798853 | Msa1248180:CDS |
| AAACATTCCGATCTTGTGGA+GGG | 0.601247 | 8_2:-41798111 | Msa1248180:CDS |
| CCAGAGAATTAATTACCCGA+GGG | 0.604314 | 8_2:-41797249 | Msa1248180:CDS |
| AAAACATTCCGATCTTGTGG+AGG | 0.609107 | 8_2:-41798112 | Msa1248180:CDS |
| GATCAGGATGTTCGACAATG+AGG | 0.613657 | 8_2:+41798697 | None:intergenic |
| ATAAGTGCAGAGGTGTCTGA+TGG | 0.613968 | 8_2:-41798762 | Msa1248180:intron |
| AAGACAAGAACTACAAACAA+TGG | 0.616882 | 8_2:-41798395 | Msa1248180:intron |
| GCCAGAGAATTAATTACCCG+AGG | 0.623901 | 8_2:-41797250 | Msa1248180:CDS |
| CTTGTGTGGTAGATAGCGTG+GGG | 0.690663 | 8_2:+41801137 | None:intergenic |
| ACCTTAACAAAGTCACAGAG+AGG | 0.697804 | 8_2:-41798486 | Msa1248180:CDS |
| CAGAGAATTAATTACCCGAG+GGG | 0.717534 | 8_2:-41797248 | Msa1248180:CDS |
| GACATGACCATTGATACGAA+AGG | 0.722401 | 8_2:-41798729 | Msa1248180:CDS |
| AGAGAGGTTAGGAATACACG+AGG | 0.774426 | 8_2:-41798470 | Msa1248180:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAAAAAAAATATTTTAA+CGG | - | chr8_2:41798069-41798088 | Msa1248180:intron | 0.0% |
| !!! | TTATATTTTCATATTCAATA+TGG | + | chr8_2:41797129-41797148 | None:intergenic | 10.0% |
| !! | TAACAATTATATAGATATTA+TGG | + | chr8_2:41799315-41799334 | None:intergenic | 10.0% |
| !! | TTAAATAAAAGTAAGTTATA+TGG | - | chr8_2:41799541-41799560 | Msa1248180:intron | 10.0% |
| !!! | AAAAAAAAATGTATTTTGTA+TGG | + | chr8_2:41799651-41799670 | None:intergenic | 10.0% |
| !! | TTTATAAATAAAATCATAGA+GGG | + | chr8_2:41800097-41800116 | None:intergenic | 10.0% |
| !!! | TTTTATAAATAAAATCATAG+AGG | + | chr8_2:41800098-41800117 | None:intergenic | 10.0% |
| !!! | TATAACCTTTTTTAATTAAT+AGG | + | chr8_2:41800395-41800414 | None:intergenic | 10.0% |
| !! | ATTAATTAAAAAAGGTTATA+TGG | - | chr8_2:41800395-41800414 | Msa1248180:intron | 10.0% |
| !!! | ACATTTTAGGATTTTTTTTA+AGG | - | chr8_2:41796659-41796678 | Msa1248180:intron | 15.0% |
| !! | AATAATGAAGAATAATTGTA+CGG | - | chr8_2:41797051-41797070 | Msa1248180:intron | 15.0% |
| !! | TGAATATGAAAATATAATCA+AGG | - | chr8_2:41797132-41797151 | Msa1248180:intron | 15.0% |
| !! | AAATTTCAAACTTTATGAAT+GGG | + | chr8_2:41797338-41797357 | None:intergenic | 15.0% |
| !! | AAAATTTCAAACTTTATGAA+TGG | + | chr8_2:41797339-41797358 | None:intergenic | 15.0% |
| !!! | AAATTTGAAATTTGTAATAC+TGG | - | chr8_2:41797416-41797435 | Msa1248180:intron | 15.0% |
| !! | CTTAGAATTATCATATTAAA+CGG | + | chr8_2:41797938-41797957 | None:intergenic | 15.0% |
| !! | TATTTAAGTGAATTCTAATT+AGG | - | chr8_2:41798236-41798255 | Msa1248180:intron | 15.0% |
| !! | TATTTAGTGATAAATAAATG+CGG | - | chr8_2:41798295-41798314 | Msa1248180:intron | 15.0% |
| !! | AATTAAATTCAAGAGTTATA+GGG | + | chr8_2:41799176-41799195 | None:intergenic | 15.0% |
| !! | AAATTAAATTCAAGAGTTAT+AGG | + | chr8_2:41799177-41799196 | None:intergenic | 15.0% |
| !! | TATAACTCTTGAATTTAATT+TGG | - | chr8_2:41799176-41799195 | Msa1248180:intron | 15.0% |
| !!! | AGAAAAGTTTTAAAAACTTA+AGG | - | chr8_2:41799596-41799615 | Msa1248180:intron | 15.0% |
| !!! | TTTATAAAAGTTTTAACTAC+AGG | - | chr8_2:41800109-41800128 | Msa1248180:intron | 15.0% |
| !! | ACTAACCTATTAATTAAAAA+AGG | - | chr8_2:41800387-41800406 | Msa1248180:intron | 15.0% |
| !!! | TTGAAGATTTTGGATAATTA+GGG | + | chr8_2:41796583-41796602 | None:intergenic | 20.0% |
| !!! | ATTGAAGATTTTGGATAATT+AGG | + | chr8_2:41796584-41796603 | None:intergenic | 20.0% |
| !!! | TTGGTTAATATTGAAGATTT+TGG | + | chr8_2:41796593-41796612 | None:intergenic | 20.0% |
| !!! | TAAGGTTCTTATTATTTTTC+TGG | - | chr8_2:41796701-41796720 | Msa1248180:CDS | 20.0% |
| !! | TAAAAAATATACTATCGTAG+TGG | + | chr8_2:41796861-41796880 | None:intergenic | 20.0% |
| !!! | ATTTTCATCATTGTTTCTTA+AGG | + | chr8_2:41797021-41797040 | None:intergenic | 20.0% |
| !!! | GATCTGAAATATATTTATAG+AGG | - | chr8_2:41797236-41797255 | Msa1248180:CDS | 20.0% |
| !!! | CATTTTAAACCATTTTTGAA+AGG | + | chr8_2:41797291-41797310 | None:intergenic | 20.0% |
| !!! | AAAGTTTGAAATTTTGAAAG+TGG | - | chr8_2:41797344-41797363 | Msa1248180:CDS | 20.0% |
| !!! | CATTTTTAAGCATATGTAAT+CGG | + | chr8_2:41797467-41797486 | None:intergenic | 20.0% |
| !!! | TGATTTGTGATAAATTCAAA+AGG | - | chr8_2:41797535-41797554 | Msa1248180:intron | 20.0% |
| !!! | AGACTTTTAGATAATATAGT+GGG | + | chr8_2:41797635-41797654 | None:intergenic | 20.0% |
| !!! | AAGACTTTTAGATAATATAG+TGG | + | chr8_2:41797636-41797655 | None:intergenic | 20.0% |
| !! | ATTTAGTGATAAATAAATGC+GGG | - | chr8_2:41798296-41798315 | Msa1248180:intron | 20.0% |
| !! | AACTATTGAAGCAATTAATA+AGG | - | chr8_2:41798331-41798350 | Msa1248180:intron | 20.0% |
| !! | ACTATTGAAGCAATTAATAA+GGG | - | chr8_2:41798332-41798351 | Msa1248180:intron | 20.0% |
| !! | AGAACATACTAATTATAATG+AGG | + | chr8_2:41798480-41798499 | None:intergenic | 20.0% |
| !!! | CTTTTAAATGCTTTTTCATT+AGG | - | chr8_2:41798604-41798623 | Msa1248180:intron | 20.0% |
| !!! | AAATGTAACTTCTGAAAATT+TGG | + | chr8_2:41799136-41799155 | None:intergenic | 20.0% |
| !!! | ATTTTCAGAAGTTACATTTT+TGG | - | chr8_2:41799137-41799156 | Msa1248180:intron | 20.0% |
| !!! | ATTTTGTTGAAGATAATCAA+CGG | - | chr8_2:41799270-41799289 | Msa1248180:intron | 20.0% |
| !!! | TACATTTTTTTTTGCATGAT+AGG | - | chr8_2:41799658-41799677 | Msa1248180:intron | 20.0% |
| !!! | ATTTCTCTTATAGTTTTTCT+TGG | + | chr8_2:41799861-41799880 | None:intergenic | 20.0% |
| !! | TGATATATGATAGAACATTA+TGG | - | chr8_2:41799922-41799941 | Msa1248180:intron | 20.0% |
| !!! | ATCACATATTCAATTTGTTT+TGG | - | chr8_2:41800033-41800052 | Msa1248180:intron | 20.0% |
| !!! | TCACATATTCAATTTGTTTT+GGG | - | chr8_2:41800034-41800053 | Msa1248180:intron | 20.0% |
| !!! | AAAAAATCCTGATAATTTTC+AGG | + | chr8_2:41800199-41800218 | None:intergenic | 20.0% |
| !!! | TAAAGAGTACTAATATGATA+TGG | + | chr8_2:41800339-41800358 | None:intergenic | 20.0% |
| !! | TTAAAAAAGGTTATATGGTA+AGG | - | chr8_2:41800400-41800419 | Msa1248180:intron | 20.0% |
| !!! | TATATTTTGTTCAAAAACTG+AGG | - | chr8_2:41800564-41800583 | Msa1248180:intron | 20.0% |
| !!! | TTTAACTTGTGTAAAATGTA+TGG | + | chr8_2:41800644-41800663 | None:intergenic | 20.0% |
| !! | TTTAACTAGACTAAAATGTA+TGG | + | chr8_2:41801002-41801021 | None:intergenic | 20.0% |
| !!! | GTTTATTTTATATTTCCAAC+AGG | - | chr8_2:41801067-41801086 | Msa1248180:intron | 20.0% |
| !! | ATTAGGTTTTCAGACATTTT+AGG | - | chr8_2:41796646-41796665 | Msa1248180:intron | 25.0% |
| !!! | TTTAGGATTTTTTTTAAGGC+AGG | - | chr8_2:41796663-41796682 | Msa1248180:intron | 25.0% |
| !!! | AGGTTATTTTTGTGAGTTTA+AGG | - | chr8_2:41796683-41796702 | Msa1248180:intron | 25.0% |
| ! | ATGGACACAAGAAATTATAA+TGG | - | chr8_2:41796782-41796801 | Msa1248180:intron | 25.0% |
| ! | GTGCTATAGAAATATTGTTA+GGG | + | chr8_2:41796906-41796925 | None:intergenic | 25.0% |
| !! | ATTCTTGTTGTAAAGATAGT+GGG | + | chr8_2:41796929-41796948 | None:intergenic | 25.0% |
| ! | TTTGTGAGAATTTCAACATA+GGG | + | chr8_2:41796962-41796981 | None:intergenic | 25.0% |
| ! | ATAATCAAGGTTTCACAAAA+TGG | - | chr8_2:41797145-41797164 | Msa1248180:intron | 25.0% |
| ! | GAAAAGACACAAATTTGAAA+TGG | - | chr8_2:41797310-41797329 | Msa1248180:CDS | 25.0% |
| ! | AAATTTGTAATACTGGTAAC+CGG | - | chr8_2:41797423-41797442 | Msa1248180:intron | 25.0% |
| ! | GAAAAGAAGAAAAACTATTG+AGG | + | chr8_2:41797685-41797704 | None:intergenic | 25.0% |
| !! | TAGTTTTTCTTCTTTTCTGA+CGG | - | chr8_2:41797688-41797707 | Msa1248180:intron | 25.0% |
| !! | TTTTCACTATCCAAAATTCT+TGG | - | chr8_2:41797904-41797923 | Msa1248180:intron | 25.0% |
| ! | AGAATTATCATATTAAACGG+TGG | + | chr8_2:41797935-41797954 | None:intergenic | 25.0% |
| !!! | TTTAAACTTGCTATCTACAA+CGG | - | chr8_2:41798108-41798127 | Msa1248180:CDS | 25.0% |
| ! | CAATAAAAGGAGAAATACAA+AGG | + | chr8_2:41798183-41798202 | None:intergenic | 25.0% |
| !! | ATACGTAAGTTGACAATAAA+AGG | + | chr8_2:41798196-41798215 | None:intergenic | 25.0% |
| ! | TAACTTTAATGAGTTACACT+TGG | - | chr8_2:41798440-41798459 | Msa1248180:CDS | 25.0% |
| ! | AATGTTGAATTCAGCTAAAA+GGG | + | chr8_2:41798550-41798569 | None:intergenic | 25.0% |
| !! | TTCATTAGGAATTTGTTTGT+TGG | - | chr8_2:41798618-41798637 | Msa1248180:intron | 25.0% |
| ! | ATCAAACCTTTGTTAAATTC+TGG | + | chr8_2:41798708-41798727 | None:intergenic | 25.0% |
| ! | AACTACAAACAATGGTAATA+TGG | - | chr8_2:41799101-41799120 | Msa1248180:intron | 25.0% |
| ! | ATATAGATATTATGGCTCAA+TGG | + | chr8_2:41799307-41799326 | None:intergenic | 25.0% |
| !! | AATGTCTTATTCTTTCAGAT+AGG | - | chr8_2:41799341-41799360 | Msa1248180:intron | 25.0% |
| ! | ATTAGTTGTAACATTACCAT+TGG | + | chr8_2:41799432-41799451 | None:intergenic | 25.0% |
| !! | AAAACTTTTCTCATGATAAG+TGG | + | chr8_2:41799587-41799606 | None:intergenic | 25.0% |
| ! | ACAAATATCTAGAGATTAAC+AGG | - | chr8_2:41799886-41799905 | Msa1248180:intron | 25.0% |
| !!! | CACATATTCAATTTGTTTTG+GGG | - | chr8_2:41800035-41800054 | Msa1248180:intron | 25.0% |
| !!! | ATTTCTCTTTGACTTTTTCA+AGG | + | chr8_2:41800168-41800187 | None:intergenic | 25.0% |
| ! | ATGATATGGCATCAAAAATT+TGG | + | chr8_2:41800325-41800344 | None:intergenic | 25.0% |
| ! | ATTAATAGGTTAGTGTTCAA+TGG | + | chr8_2:41800381-41800400 | None:intergenic | 25.0% |
| !! | AGTGTTGGAAAAAAAAGTTT+AGG | - | chr8_2:41800605-41800624 | Msa1248180:intron | 25.0% |
| ! | TGTAAGTAGTTGCTAATATA+TGG | - | chr8_2:41800689-41800708 | Msa1248180:intron | 25.0% |
| !!! | GCTTATTTTATATTTCCAAC+AGG | - | chr8_2:41800714-41800733 | Msa1248180:intron | 25.0% |
| ! | GATTTATTGGGAAAATATAC+CGG | - | chr8_2:41800742-41800761 | Msa1248180:intron | 25.0% |
| !!! | ATACTTGTTAAAGCTTTGAA+GGG | - | chr8_2:41800817-41800836 | Msa1248180:intron | 25.0% |
| !! | ACAAAAGTATAATGAGAAGA+TGG | + | chr8_2:41800964-41800983 | None:intergenic | 25.0% |
| !! | ATCTTCTCATTATACTTTTG+TGG | - | chr8_2:41800963-41800982 | Msa1248180:intron | 25.0% |
| ! | ATTAAATTCTCCCATAAGAT+CGG | + | chr8_2:41801117-41801136 | None:intergenic | 25.0% |
| !!! | AAACTTGTTAAAGCTTTGAA+GGG | - | chr8_2:41801170-41801189 | Msa1248180:CDS | 25.0% |
| ! | ATGCGAAAAATAAAGAGTGT+AGG | - | chr8_2:41796749-41796768 | Msa1248180:CDS | 30.0% |
| ! | TGCGAAAAATAAAGAGTGTA+GGG | - | chr8_2:41796750-41796769 | Msa1248180:CDS | 30.0% |
| ! | GGTGCTATAGAAATATTGTT+AGG | + | chr8_2:41796907-41796926 | None:intergenic | 30.0% |
| ! | TTCTTGTTGTAAAGATAGTG+GGG | + | chr8_2:41796928-41796947 | None:intergenic | 30.0% |
| ! | GATTCTTGTTGTAAAGATAG+TGG | + | chr8_2:41796930-41796949 | None:intergenic | 30.0% |
| GTTTGTGAGAATTTCAACAT+AGG | + | chr8_2:41796963-41796982 | None:intergenic | 30.0% | |
| !! | GAAATTTTGAAAGTGGTAAC+CGG | - | chr8_2:41797351-41797370 | Msa1248180:CDS | 30.0% |
| GTTACACATTATATGGTAAC+CGG | + | chr8_2:41797445-41797464 | None:intergenic | 30.0% | |
| GTAATCGGTTACACATTATA+TGG | + | chr8_2:41797452-41797471 | None:intergenic | 30.0% | |
| ATCTTCATGTTAATTTCCTC+TGG | - | chr8_2:41797657-41797676 | Msa1248180:intron | 30.0% | |
| ! | AGTTTTTCTTCTTTTCTGAC+GGG | - | chr8_2:41797689-41797708 | Msa1248180:intron | 30.0% |
| GAATATTTCCTTCTTAGACT+TGG | + | chr8_2:41797738-41797757 | None:intergenic | 30.0% | |
| ACGAATCTAAGTTCTATTCT+TGG | - | chr8_2:41797797-41797816 | Msa1248180:intron | 30.0% | |
| ATCTAAGTTCTATTCTTGGA+TGG | - | chr8_2:41797801-41797820 | Msa1248180:intron | 30.0% | |
| TCTTCAATTCTTAGTCAAAG+GGG | + | chr8_2:41797860-41797879 | None:intergenic | 30.0% | |
| CTCTTCAATTCTTAGTCAAA+GGG | + | chr8_2:41797861-41797880 | None:intergenic | 30.0% | |
| ACTCTTCAATTCTTAGTCAA+AGG | + | chr8_2:41797862-41797881 | None:intergenic | 30.0% | |
| ! | ATTCTAAGAGAACTTCTATG+TGG | - | chr8_2:41797950-41797969 | Msa1248180:intron | 30.0% |
| AACATATAAAAACAACGCAC+AGG | + | chr8_2:41798027-41798046 | None:intergenic | 30.0% | |
| GATAGCAAGTTTAAAGAAAG+AGG | + | chr8_2:41798103-41798122 | None:intergenic | 30.0% | |
| ATAAACCCAGTCAAAACAAT+TGG | - | chr8_2:41798139-41798158 | Msa1248180:intron | 30.0% | |
| ATCACAAATTGATACTCATG+TGG | + | chr8_2:41798373-41798392 | None:intergenic | 30.0% | |
| CAATGTTGAATTCAGCTAAA+AGG | + | chr8_2:41798551-41798570 | None:intergenic | 30.0% | |
| GCTGAATTCAACATTGATAA+TGG | - | chr8_2:41798555-41798574 | Msa1248180:intron | 30.0% | |
| ATGATCACCTTGAAAATCTT+TGG | + | chr8_2:41798661-41798680 | None:intergenic | 30.0% | |
| ! | ATCAAACCCTTGTCAATTTT+TGG | + | chr8_2:41798816-41798835 | None:intergenic | 30.0% |
| !! | GAAAAAAAGGAGTGTCATAA+AGG | - | chr8_2:41798858-41798877 | Msa1248180:CDS | 30.0% |
| AAGACAAGAACTACAAACAA+TGG | - | chr8_2:41799093-41799112 | Msa1248180:intron | 30.0% | |
| !!! | ATAAAGTGTTGTTTTGCAGA+AGG | - | chr8_2:41799502-41799521 | Msa1248180:intron | 30.0% |
| ATACCTGTAGATTATGTAGT+AGG | - | chr8_2:41799788-41799807 | Msa1248180:intron | 30.0% | |
| TACCTGTAGATTATGTAGTA+GGG | - | chr8_2:41799789-41799808 | Msa1248180:intron | 30.0% | |
| ATATCTAGAGATTAACAGGT+TGG | - | chr8_2:41799890-41799909 | Msa1248180:intron | 30.0% | |
| !!! | TCTTTGACTTTTTCAAGGAA+GGG | + | chr8_2:41800163-41800182 | None:intergenic | 30.0% |
| GGGAATTACAATTATTGGTA+TGG | - | chr8_2:41800260-41800279 | Msa1248180:intron | 30.0% | |
| AATATAAACTGTCCTTCATG+AGG | - | chr8_2:41800486-41800505 | Msa1248180:intron | 30.0% | |
| ! | TTTTTCCAACACTTCGTAAA+TGG | + | chr8_2:41800598-41800617 | None:intergenic | 30.0% |
| CAACAGGTGTATGATTTATT+GGG | - | chr8_2:41800730-41800749 | Msa1248180:intron | 30.0% | |
| ATTAAATTCGTCCATAAGAC+CGG | + | chr8_2:41800764-41800783 | None:intergenic | 30.0% | |
| ! | CTTCAAAGCTTTAACAAGTA+TGG | + | chr8_2:41800818-41800837 | None:intergenic | 30.0% |
| ! | CATACTTGTTAAAGCTTTGA+AGG | - | chr8_2:41800816-41800835 | Msa1248180:intron | 30.0% |
| TGAAATGAGTTGTAAACTCT+TGG | - | chr8_2:41800850-41800869 | Msa1248180:intron | 30.0% | |
| TCCAAGTAGTTGCTAATATA+TGG | - | chr8_2:41801042-41801061 | Msa1248180:intron | 30.0% | |
| TCCATATATTAGCAACTACT+TGG | + | chr8_2:41801046-41801065 | None:intergenic | 30.0% | |
| CAACAGGTGTATGATTTATT+GGG | - | chr8_2:41800730-41800749 | Msa1248180:intron | 30.0% | |
| GGAAAATATACCGATCTTAT+GGG | - | chr8_2:41801104-41801123 | Msa1248180:intron | 30.0% | |
| ! | CTTCAAAGCTTTAACAAGTT+TGG | + | chr8_2:41801171-41801190 | None:intergenic | 30.0% |
| !! | CAAACTTGTTAAAGCTTTGA+AGG | - | chr8_2:41801169-41801188 | Msa1248180:CDS | 30.0% |
| GTCAGCAACATCATTATCTT+TGG | + | chr8_2:41796311-41796330 | None:intergenic | 35.0% | |
| ! | AAAAACTTACGAGTCTTGTG+TGG | + | chr8_2:41796368-41796387 | None:intergenic | 35.0% |
| TGCACTCTGAACTTATTGTT+TGG | + | chr8_2:41796612-41796631 | None:intergenic | 35.0% | |
| AATGGTTCCCTTCTAAACTA+AGG | - | chr8_2:41796800-41796819 | Msa1248180:intron | 35.0% | |
| ATGGTTCCCTTCTAAACTAA+GGG | - | chr8_2:41796801-41796820 | Msa1248180:intron | 35.0% | |
| GATTTGCCCTTAGTTTAGAA+GGG | + | chr8_2:41796810-41796829 | None:intergenic | 35.0% | |
| TTACAAGAAAACTTACCCCA+AGG | - | chr8_2:41796878-41796897 | Msa1248180:intron | 35.0% | |
| AAATATTGTTAGGGAGCCTT+GGG | + | chr8_2:41796897-41796916 | None:intergenic | 35.0% | |
| GATTCTTGTTAAAGACAGTG+GGG | + | chr8_2:41796999-41797018 | None:intergenic | 35.0% | |
| GGATTCTTGTTAAAGACAGT+GGG | + | chr8_2:41797000-41797019 | None:intergenic | 35.0% | |
| AGGATTCTTGTTAAAGACAG+TGG | + | chr8_2:41797001-41797020 | None:intergenic | 35.0% | |
| GCAATGCTACCTTTCAAAAA+TGG | - | chr8_2:41797279-41797298 | Msa1248180:CDS | 35.0% | |
| ! | TTACCATATAGGGGTGTAAT+CGG | - | chr8_2:41797374-41797393 | Msa1248180:intron | 35.0% |
| !! | TGACTTTTCTAGAAGTTCTC+AGG | - | chr8_2:41797485-41797504 | Msa1248180:intron | 35.0% |
| AGTGGGAATCATTGTAAGTA+TGG | + | chr8_2:41797618-41797637 | None:intergenic | 35.0% | |
| ! | GTTTTTCTTCTTTTCTGACG+GGG | - | chr8_2:41797690-41797709 | Msa1248180:intron | 35.0% |
| ! | TTTTTCTTCTTTTCTGACGG+GGG | - | chr8_2:41797691-41797710 | Msa1248180:intron | 35.0% |
| ! | TTTCCTTCTTAGACTTGGTT+GGG | + | chr8_2:41797733-41797752 | None:intergenic | 35.0% |
| ! | ATTTCCTTCTTAGACTTGGT+TGG | + | chr8_2:41797734-41797753 | None:intergenic | 35.0% |
| AACAATTACTTGTCGAACTC+CGG | - | chr8_2:41797824-41797843 | Msa1248180:intron | 35.0% | |
| !!! | ATGCTCCAATTGTTTTGACT+GGG | + | chr8_2:41798147-41798166 | None:intergenic | 35.0% |
| !!! | TATGCTCCAATTGTTTTGAC+TGG | + | chr8_2:41798148-41798167 | None:intergenic | 35.0% |
| TAATAAGGGATGCGCAAAAT+AGG | - | chr8_2:41798346-41798365 | Msa1248180:intron | 35.0% | |
| ! | TTGAAAATCTTTGGCCTTCT+CGG | + | chr8_2:41798652-41798671 | None:intergenic | 35.0% |
| CGTGATCCAGAATTTAACAA+AGG | - | chr8_2:41798699-41798718 | Msa1248180:CDS | 35.0% | |
| TCCTGATCCAAAAATTGACA+AGG | - | chr8_2:41798806-41798825 | Msa1248180:CDS | 35.0% | |
| CCTGATCCAAAAATTGACAA+GGG | - | chr8_2:41798807-41798826 | Msa1248180:CDS | 35.0% | |
| ! | TGAGAAGCGTGATGAAAAAA+AGG | - | chr8_2:41798845-41798864 | Msa1248180:CDS | 35.0% |
| TGTTGCATGATGAAGATTAC+AGG | - | chr8_2:41798893-41798912 | Msa1248180:intron | 35.0% | |
| ! | GTAGGGACTTCTCAAATTTT+CGG | + | chr8_2:41799048-41799067 | None:intergenic | 35.0% |
| ! | TTTCAGATAGGCGATTTGTT+GGG | - | chr8_2:41799353-41799372 | Msa1248180:intron | 35.0% |
| ATTAAATCCCTCCACAAGAT+CGG | + | chr8_2:41799387-41799406 | None:intergenic | 35.0% | |
| TTGACACAATGTGAATCCAA+TGG | - | chr8_2:41799413-41799432 | Msa1248180:intron | 35.0% | |
| AGAGAAGATAAAGAGAGAGT+CGG | - | chr8_2:41799701-41799720 | Msa1248180:intron | 35.0% | |
| AGAACCTATCACGGAAAATA+TGG | - | chr8_2:41799727-41799746 | Msa1248180:intron | 35.0% | |
| !! | TTTTAACTACAGGTTGTCTC+AGG | - | chr8_2:41800119-41800138 | Msa1248180:intron | 35.0% |
| !!! | CTCTTTGACTTTTTCAAGGA+AGG | + | chr8_2:41800164-41800183 | None:intergenic | 35.0% |
| AAGCGATCCTGAAAATTATC+AGG | - | chr8_2:41800189-41800208 | Msa1248180:intron | 35.0% | |
| ATTCTCTGGCATAGATATGA+AGG | + | chr8_2:41800228-41800247 | None:intergenic | 35.0% | |
| CAATAATTGTAATTCCCCTC+GGG | + | chr8_2:41800257-41800276 | None:intergenic | 35.0% | |
| CCAATAATTGTAATTCCCCT+CGG | + | chr8_2:41800258-41800277 | None:intergenic | 35.0% | |
| ! | ACCTGAAGAAAAAGAAGTGT+TGG | - | chr8_2:41800512-41800531 | Msa1248180:intron | 35.0% |
| ! | TCCAACACTTCTTTTTCTTC+AGG | + | chr8_2:41800516-41800535 | None:intergenic | 35.0% |
| CCAATAAATCATACACCTGT+TGG | + | chr8_2:41800732-41800751 | None:intergenic | 35.0% | |
| CCAACAGGTGTATGATTTAT+TGG | - | chr8_2:41800729-41800748 | Msa1248180:intron | 35.0% | |
| TTATGCTTCAAGCATCACAA+TGG | + | chr8_2:41800877-41800896 | None:intergenic | 35.0% | |
| AGTATAATGAGAAGATGGCT+TGG | + | chr8_2:41800959-41800978 | None:intergenic | 35.0% | |
| CCAATAAATCATACACCTGT+TGG | + | chr8_2:41800732-41800751 | None:intergenic | 35.0% | |
| CCAACAGGTGTATGATTTAT+TGG | - | chr8_2:41800729-41800748 | Msa1248180:intron | 35.0% | |
| GGGAAAATATACCGATCTTA+TGG | - | chr8_2:41801103-41801122 | Msa1248180:intron | 35.0% | |
| ATAAGTTCAGAGTGCAACCT+AGG | - | chr8_2:41796616-41796635 | Msa1248180:intron | 40.0% | |
| TAAGTTCAGAGTGCAACCTA+GGG | - | chr8_2:41796617-41796636 | Msa1248180:intron | 40.0% | |
| AAAACCTAATTCACCTCCCT+AGG | + | chr8_2:41796636-41796655 | None:intergenic | 40.0% | |
| GAGTGTAGGGATGAGAAAAA+TGG | - | chr8_2:41796763-41796782 | Msa1248180:intron | 40.0% | |
| GGATTTGCCCTTAGTTTAGA+AGG | + | chr8_2:41796811-41796830 | None:intergenic | 40.0% | |
| ! | ATCGTAGTGGAATTCCTTCA+CGG | + | chr8_2:41796848-41796867 | None:intergenic | 40.0% |
| AATATTGTTAGGGAGCCTTG+GGG | + | chr8_2:41796896-41796915 | None:intergenic | 40.0% | |
| GAAATATTGTTAGGGAGCCT+TGG | + | chr8_2:41796898-41796917 | None:intergenic | 40.0% | |
| TGAAAGGTAGCATTGCTTCA+TGG | + | chr8_2:41797275-41797294 | None:intergenic | 40.0% | |
| TGGTAACCGGTTACCATATA+GGG | - | chr8_2:41797364-41797383 | Msa1248180:intron | 40.0% | |
| TTACACCCCTATATGGTAAC+CGG | + | chr8_2:41797373-41797392 | None:intergenic | 40.0% | |
| TAACCGATTACACCCCTATA+TGG | + | chr8_2:41797380-41797399 | None:intergenic | 40.0% | |
| ! | AAAAACTATTGAGGCACCAG+AGG | + | chr8_2:41797676-41797695 | None:intergenic | 40.0% |
| AAACCCAACCAAGTCTAAGA+AGG | - | chr8_2:41797727-41797746 | Msa1248180:intron | 40.0% | |
| CACAAACAATTGAGCTCAAG+TGG | - | chr8_2:41797762-41797781 | Msa1248180:intron | 40.0% | |
| ! | GGTGGAAACACCAAGAATTT+TGG | + | chr8_2:41797917-41797936 | None:intergenic | 40.0% |
| CGACTTAGCTCAATTACATG+TGG | - | chr8_2:41797991-41798010 | Msa1248180:intron | 40.0% | |
| !! | ACTTGCTATCTACAACGGTT+TGG | - | chr8_2:41798113-41798132 | Msa1248180:CDS | 40.0% |
| ! | GAGAAGGCCAAAGATTTTCA+AGG | - | chr8_2:41798651-41798670 | Msa1248180:CDS | 40.0% |
| CAAAGGTTTGATAAGTGCAG+AGG | - | chr8_2:41798716-41798735 | Msa1248180:CDS | 40.0% | |
| GACATGACCATTGATACGAA+AGG | - | chr8_2:41798759-41798778 | Msa1248180:intron | 40.0% | |
| !! | CCCTTGTCAATTTTTGGATC+AGG | + | chr8_2:41798810-41798829 | None:intergenic | 40.0% |
| !! | AAGGAGTGTCATAAAGGTGA+AGG | - | chr8_2:41798864-41798883 | Msa1248180:CDS | 40.0% |
| AAGGTAAGAAAACGCTTCAC+TGG | + | chr8_2:41798987-41799006 | None:intergenic | 40.0% | |
| ACCTTAACAAAGTCACAGAG+AGG | - | chr8_2:41799002-41799021 | Msa1248180:intron | 40.0% | |
| ACCTCTCTGTGACTTTGTTA+AGG | + | chr8_2:41799006-41799025 | None:intergenic | 40.0% | |
| AACAAAGTCACAGAGAGGTT+AGG | - | chr8_2:41799007-41799026 | Msa1248180:intron | 40.0% | |
| TCCCTACATAGCTACAGAAT+GGG | - | chr8_2:41799061-41799080 | Msa1248180:intron | 40.0% | |
| TCCCATTCTGTAGCTATGTA+GGG | + | chr8_2:41799065-41799084 | None:intergenic | 40.0% | |
| TTCCCATTCTGTAGCTATGT+AGG | + | chr8_2:41799066-41799085 | None:intergenic | 40.0% | |
| CTTTCAGATAGGCGATTTGT+TGG | - | chr8_2:41799352-41799371 | Msa1248180:intron | 40.0% | |
| AAAACATTCCGATCTTGTGG+AGG | - | chr8_2:41799376-41799395 | Msa1248180:intron | 40.0% | |
| AAACATTCCGATCTTGTGGA+GGG | - | chr8_2:41799377-41799396 | Msa1248180:intron | 40.0% | |
| GCCTCTCTATTGAGAAATGT+TGG | - | chr8_2:41799618-41799637 | Msa1248180:intron | 40.0% | |
| GCCAACATTTCTCAATAGAG+AGG | + | chr8_2:41799622-41799641 | None:intergenic | 40.0% | |
| TATTGAGAAATGTTGGCGCT+AGG | - | chr8_2:41799625-41799644 | Msa1248180:intron | 40.0% | |
| GAGAAGATAAAGAGAGAGTC+GGG | - | chr8_2:41799702-41799721 | Msa1248180:intron | 40.0% | |
| AGAAGATAAAGAGAGAGTCG+GGG | - | chr8_2:41799703-41799722 | Msa1248180:intron | 40.0% | |
| ACCTATCACGGAAAATATGG+TGG | - | chr8_2:41799730-41799749 | Msa1248180:intron | 40.0% | |
| ! | ACCACCATATTTTCCGTGAT+AGG | + | chr8_2:41799734-41799753 | None:intergenic | 40.0% |
| ATATGGTGGTAACTCGACAT+AGG | - | chr8_2:41799744-41799763 | Msa1248180:intron | 40.0% | |
| AGCCCTACTACATAATCTAC+AGG | + | chr8_2:41799794-41799813 | None:intergenic | 40.0% | |
| CCAGAGAATTAATTACCCGA+GGG | - | chr8_2:41800239-41800258 | Msa1248180:intron | 40.0% | |
| CAGAGAATTAATTACCCGAG+GGG | - | chr8_2:41800240-41800259 | Msa1248180:intron | 40.0% | |
| CCGAGGGGAATTACAATTAT+TGG | - | chr8_2:41800255-41800274 | Msa1248180:intron | 40.0% | |
| !! | TCTTCAGGTTTTCCTCATGA+AGG | + | chr8_2:41800501-41800520 | None:intergenic | 40.0% |
| ACACTCCATTTACGAAGTGT+TGG | - | chr8_2:41800590-41800609 | Msa1248180:intron | 40.0% | |
| GGGAAAATATACCGGTCTTA+TGG | - | chr8_2:41800750-41800769 | Msa1248180:intron | 40.0% | |
| TCTTGTGTGGTAGATAGCGT+GGG | + | chr8_2:41796355-41796374 | None:intergenic | 45.0% | |
| ! | TCGTAGTGGAATTCCTTCAC+GGG | + | chr8_2:41796847-41796866 | None:intergenic | 45.0% |
| GTGGTAACCGGTTACCATAT+AGG | - | chr8_2:41797363-41797382 | Msa1248180:intron | 45.0% | |
| GGTAACCGGTTACCATATAG+GGG | - | chr8_2:41797365-41797384 | Msa1248180:intron | 45.0% | |
| ! | TTCTCAGGCATTGCTTCACA+TGG | - | chr8_2:41797500-41797519 | Msa1248180:intron | 45.0% |
| ! | TCTCAGGCATTGCTTCACAT+GGG | - | chr8_2:41797501-41797520 | Msa1248180:intron | 45.0% |
| TTGTCGAACTCCGGATTACT+AGG | - | chr8_2:41797833-41797852 | Msa1248180:intron | 45.0% | |
| TGTCGAACTCCGGATTACTA+GGG | - | chr8_2:41797834-41797853 | Msa1248180:intron | 45.0% | |
| !! | TGTTGGATTGAGTACCGAGA+AGG | - | chr8_2:41798635-41798654 | Msa1248180:CDS | 45.0% |
| !! | ATAAGTGCAGAGGTGTCTGA+TGG | - | chr8_2:41798726-41798745 | Msa1248180:CDS | 45.0% |
| GCGATCACCTTTCGTATCAA+TGG | + | chr8_2:41798769-41798788 | None:intergenic | 45.0% | |
| GATCAGGATGTTCGACAATG+AGG | + | chr8_2:41798794-41798813 | None:intergenic | 45.0% | |
| AGAGAGGTTAGGAATACACG+AGG | - | chr8_2:41799018-41799037 | Msa1248180:intron | 45.0% | |
| GTCCCTACATAGCTACAGAA+TGG | - | chr8_2:41799060-41799079 | Msa1248180:intron | 45.0% | |
| GGGAAAACATTCCGATCTTG+TGG | - | chr8_2:41799373-41799392 | Msa1248180:intron | 45.0% | |
| GTAACTCGACATAGGTGGTT+TGG | - | chr8_2:41799752-41799771 | Msa1248180:intron | 45.0% | |
| ACTAAAAGGGGTCTGCTACA+TGG | + | chr8_2:41799959-41799978 | None:intergenic | 45.0% | |
| ! | ATGTAGCAGACCCCTTTTAG+TGG | - | chr8_2:41799958-41799977 | Msa1248180:intron | 45.0% |
| ! | TGTAGCAGACCCCTTTTAGT+GGG | - | chr8_2:41799959-41799978 | Msa1248180:intron | 45.0% |
| GCCAGAGAATTAATTACCCG+AGG | - | chr8_2:41800238-41800257 | Msa1248180:intron | 45.0% | |
| CCCTCGGGTAATTAATTCTC+TGG | + | chr8_2:41800242-41800261 | None:intergenic | 45.0% | |
| !!! | AAAATTTCTTTTTTTATTTT+TGG | + | chr8_2:41797888-41797907 | None:intergenic | 5.0% |
| !! | TTTAATTAAATTATAATCAA+TGG | + | chr8_2:41798405-41798424 | None:intergenic | 5.0% |
| !! | ATTGATTATAATTTAATTAA+AGG | - | chr8_2:41798404-41798423 | Msa1248180:CDS | 5.0% |
| !! | TTATTAGAAATAATAATAAA+GGG | + | chr8_2:41799486-41799505 | None:intergenic | 5.0% |
| !! | TTTATTAGAAATAATAATAA+AGG | + | chr8_2:41799487-41799506 | None:intergenic | 5.0% |
| CTTGTGTGGTAGATAGCGTG+GGG | + | chr8_2:41796354-41796373 | None:intergenic | 50.0% | |
| GTCTTGTGTGGTAGATAGCG+TGG | + | chr8_2:41796356-41796375 | None:intergenic | 50.0% | |
| GCAACCTAGGGAGGTGAATT+AGG | - | chr8_2:41796629-41796648 | Msa1248180:intron | 50.0% | |
| ! | CGTAGTGGAATTCCTTCACG+GGG | + | chr8_2:41796846-41796865 | None:intergenic | 50.0% |
| ! | CTCAGGCATTGCTTCACATG+GGG | - | chr8_2:41797502-41797521 | Msa1248180:intron | 50.0% |
| TCAAAGGGGCCCTAGTAATC+CGG | + | chr8_2:41797846-41797865 | None:intergenic | 50.0% | |
| AGTCGGGGTAGAACCTATCA+CGG | - | chr8_2:41799718-41799737 | Msa1248180:intron | 50.0% | |
| TGGTGGTAACTCGACATAGG+TGG | - | chr8_2:41799747-41799766 | Msa1248180:intron | 50.0% | |
| AAGCCTCGTCCCACTAAAAG+GGG | + | chr8_2:41799971-41799990 | None:intergenic | 50.0% | |
| CAAGCCTCGTCCCACTAAAA+GGG | + | chr8_2:41799972-41799991 | None:intergenic | 50.0% | |
| ! | GTAGATAGCGTGGGGCGTTT+GGG | + | chr8_2:41796346-41796365 | None:intergenic | 55.0% |
| GTTCAGAGTGCAACCTAGGG+AGG | - | chr8_2:41796620-41796639 | Msa1248180:intron | 55.0% | |
| ATTCCTTCACGGGGTGTGGA+GGG | + | chr8_2:41796837-41796856 | None:intergenic | 55.0% | |
| AATTCCTTCACGGGGTGTGG+AGG | + | chr8_2:41796838-41796857 | None:intergenic | 55.0% | |
| TGGAATTCCTTCACGGGGTG+TGG | + | chr8_2:41796841-41796860 | None:intergenic | 55.0% | |
| ! | AGACCCCTTTTAGTGGGACG+AGG | - | chr8_2:41799965-41799984 | Msa1248180:intron | 55.0% |
| GCAAGCCTCGTCCCACTAAA+AGG | + | chr8_2:41799973-41799992 | None:intergenic | 55.0% | |
| ! | GGTAGATAGCGTGGGGCGTT+TGG | + | chr8_2:41796347-41796366 | None:intergenic | 60.0% |
| TTCACGGGGTGTGGAGGGAG+TGG | + | chr8_2:41796832-41796851 | None:intergenic | 65.0% | |
| ACTCCCTCCACACCCCGTGA+AGG | - | chr8_2:41796831-41796850 | Msa1248180:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 41796296 | 41801214 | 41796296 | ID=Msa1248180;Name=Msa1248180 |
| chr8_2 | mRNA | 41796296 | 41801214 | 41796296 | ID=Msa1248180-mRNA-1;Parent=Msa1248180;Name=Msa1248180-mRNA-1;_AED=0.06;_eAED=0.07;_QI=2|0|0|1|0.71|0.5|8|0|297 |
| chr8_2 | exon | 41801133 | 41801214 | 41801133 | ID=Msa1248180-mRNA-1:exon:12768;Parent=Msa1248180-mRNA-1 |
| chr8_2 | exon | 41798790 | 41798884 | 41798790 | ID=Msa1248180-mRNA-1:exon:12767;Parent=Msa1248180-mRNA-1 |
| chr8_2 | exon | 41798631 | 41798774 | 41798631 | ID=Msa1248180-mRNA-1:exon:12766;Parent=Msa1248180-mRNA-1 |
| chr8_2 | exon | 41798396 | 41798532 | 41798396 | ID=Msa1248180-mRNA-1:exon:12765;Parent=Msa1248180-mRNA-1 |
| chr8_2 | exon | 41798076 | 41798151 | 41798076 | ID=Msa1248180-mRNA-1:exon:12764;Parent=Msa1248180-mRNA-1 |
| chr8_2 | exon | 41797234 | 41797379 | 41797234 | ID=Msa1248180-mRNA-1:exon:12763;Parent=Msa1248180-mRNA-1 |
| chr8_2 | exon | 41796688 | 41796774 | 41796688 | ID=Msa1248180-mRNA-1:exon:12762;Parent=Msa1248180-mRNA-1 |
| chr8_2 | exon | 41796296 | 41796421 | 41796296 | ID=Msa1248180-mRNA-1:exon:12761;Parent=Msa1248180-mRNA-1 |
| chr8_2 | five_prime_UTR | 41801213 | 41801214 | 41801213 | ID=Msa1248180-mRNA-1:five_prime_utr;Parent=Msa1248180-mRNA-1 |
| chr8_2 | CDS | 41801133 | 41801212 | 41801133 | ID=Msa1248180-mRNA-1:cds;Parent=Msa1248180-mRNA-1 |
| chr8_2 | CDS | 41798790 | 41798884 | 41798790 | ID=Msa1248180-mRNA-1:cds;Parent=Msa1248180-mRNA-1 |
| chr8_2 | CDS | 41798631 | 41798774 | 41798631 | ID=Msa1248180-mRNA-1:cds;Parent=Msa1248180-mRNA-1 |
| chr8_2 | CDS | 41798396 | 41798532 | 41798396 | ID=Msa1248180-mRNA-1:cds;Parent=Msa1248180-mRNA-1 |
| chr8_2 | CDS | 41798076 | 41798151 | 41798076 | ID=Msa1248180-mRNA-1:cds;Parent=Msa1248180-mRNA-1 |
| chr8_2 | CDS | 41797234 | 41797379 | 41797234 | ID=Msa1248180-mRNA-1:cds;Parent=Msa1248180-mRNA-1 |
| chr8_2 | CDS | 41796688 | 41796774 | 41796688 | ID=Msa1248180-mRNA-1:cds;Parent=Msa1248180-mRNA-1 |
| chr8_2 | CDS | 41796296 | 41796421 | 41796296 | ID=Msa1248180-mRNA-1:cds;Parent=Msa1248180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
