Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250430 | KEH16287.1 | 55.294 | 340 | 97 | 10 | 33 | 336 | 1 | 321 | 9.33e-103 | 315 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250430 | sp|Q1PF16|BH019_ARATH | 41.206 | 199 | 105 | 5 | 142 | 331 | 100 | 295 | 4.93e-36 | 135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa1250430 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250430 | MtrunA17_Chr4g0054621 | 55.294 | 340 | 97 | 10 | 33 | 336 | 22 | 342 | 1.57e-106 | 315 |
| Msa1250430 | MtrunA17_Chr2g0307131 | 46.686 | 347 | 125 | 9 | 35 | 335 | 23 | 355 | 2.96e-85 | 261 |
| Msa1250430 | MtrunA17_Chr6g0468491 | 49.847 | 327 | 126 | 13 | 35 | 336 | 1 | 314 | 2.56e-84 | 257 |
| Msa1250430 | MtrunA17_Chr4g0033391 | 48.265 | 317 | 132 | 6 | 35 | 337 | 24 | 322 | 1.14e-79 | 246 |
| Msa1250430 | MtrunA17_Chr2g0307141 | 45.115 | 348 | 135 | 8 | 35 | 336 | 23 | 360 | 2.22e-77 | 241 |
| Msa1250430 | MtrunA17_Chr4g0054581 | 44.598 | 361 | 136 | 11 | 35 | 336 | 24 | 379 | 5.47e-76 | 238 |
| Msa1250430 | MtrunA17_Chr4g0033291 | 48.485 | 330 | 118 | 11 | 35 | 336 | 24 | 329 | 4.94e-75 | 234 |
| Msa1250430 | MtrunA17_Chr4g0033281 | 46.417 | 321 | 132 | 7 | 35 | 334 | 23 | 324 | 1.16e-70 | 223 |
| Msa1250430 | MtrunA17_Chr7g0225901 | 49.550 | 222 | 96 | 6 | 94 | 311 | 31 | 240 | 9.30e-58 | 187 |
| Msa1250430 | MtrunA17_Chr6g0468461 | 44.551 | 312 | 115 | 14 | 35 | 311 | 23 | 311 | 1.04e-57 | 190 |
| Msa1250430 | MtrunA17_Chr5g0400621 | 42.857 | 308 | 157 | 7 | 37 | 335 | 36 | 333 | 3.50e-57 | 188 |
| Msa1250430 | MtrunA17_Chr5g0400641 | 55.769 | 156 | 64 | 2 | 166 | 317 | 2 | 156 | 4.52e-49 | 162 |
| Msa1250430 | MtrunA17_Chr5g0400661 | 37.354 | 257 | 125 | 6 | 108 | 331 | 81 | 334 | 4.11e-42 | 149 |
| Msa1250430 | MtrunA17_Chr2g0280161 | 39.512 | 205 | 120 | 2 | 134 | 334 | 149 | 353 | 7.09e-41 | 146 |
| Msa1250430 | MtrunA17_Chr4g0002801 | 37.795 | 254 | 126 | 5 | 99 | 332 | 90 | 331 | 3.10e-40 | 144 |
| Msa1250430 | MtrunA17_Chr4g0054561 | 39.648 | 227 | 126 | 4 | 109 | 326 | 96 | 320 | 3.48e-39 | 141 |
| Msa1250430 | MtrunA17_Chr4g0054551 | 38.326 | 227 | 129 | 4 | 109 | 326 | 96 | 320 | 1.14e-38 | 140 |
| Msa1250430 | MtrunA17_Chr2g0333641 | 38.723 | 235 | 126 | 7 | 107 | 326 | 71 | 302 | 2.89e-37 | 135 |
| Msa1250430 | MtrunA17_Chr4g0049331 | 40.437 | 183 | 106 | 1 | 148 | 327 | 121 | 303 | 1.37e-36 | 134 |
| Msa1250430 | MtrunA17_Chr4g0002781 | 36.614 | 254 | 133 | 6 | 99 | 332 | 105 | 350 | 4.56e-36 | 133 |
| Msa1250430 | MtrunA17_Chr5g0400671 | 33.333 | 249 | 143 | 4 | 106 | 331 | 75 | 323 | 4.82e-35 | 130 |
| Msa1250430 | MtrunA17_Chr2g0333621 | 35.865 | 237 | 135 | 6 | 113 | 335 | 82 | 315 | 2.37e-33 | 125 |
| Msa1250430 | MtrunA17_Chr8g0336681 | 33.750 | 240 | 144 | 4 | 113 | 337 | 102 | 341 | 7.15e-33 | 124 |
| Msa1250430 | MtrunA17_Chr4g0054571 | 35.685 | 241 | 132 | 4 | 113 | 333 | 94 | 331 | 1.11e-32 | 124 |
| Msa1250430 | MtrunA17_Chr2g0333611 | 31.897 | 232 | 124 | 5 | 115 | 333 | 7 | 217 | 2.28e-30 | 115 |
| Msa1250430 | MtrunA17_Chr7g0249811 | 30.712 | 267 | 154 | 6 | 75 | 327 | 75 | 324 | 4.93e-27 | 108 |
| Msa1250430 | MtrunA17_Chr2g0333541 | 36.744 | 215 | 120 | 5 | 130 | 337 | 69 | 274 | 1.00e-24 | 101 |
| Msa1250430 | MtrunA17_Chr7g0233441 | 37.671 | 146 | 76 | 3 | 188 | 329 | 60 | 194 | 2.29e-20 | 87.4 |
| Msa1250430 | MtrunA17_Chr4g0002831 | 36.025 | 161 | 86 | 5 | 173 | 328 | 53 | 201 | 8.78e-20 | 86.3 |
| Msa1250430 | MtrunA17_Chr4g0002851 | 34.104 | 173 | 97 | 4 | 158 | 329 | 38 | 194 | 1.68e-19 | 85.1 |
| Msa1250430 | MtrunA17_Chr8g0346161 | 32.292 | 192 | 109 | 8 | 132 | 305 | 255 | 443 | 2.10e-15 | 77.0 |
| Msa1250430 | MtrunA17_Chr8g0366751 | 32.386 | 176 | 102 | 4 | 142 | 303 | 445 | 617 | 1.53e-14 | 74.7 |
| Msa1250430 | MtrunA17_Chr7g0275821 | 31.410 | 156 | 100 | 2 | 158 | 312 | 248 | 397 | 5.56e-14 | 72.4 |
| Msa1250430 | MtrunA17_Chr5g0411341 | 30.055 | 183 | 84 | 7 | 142 | 293 | 476 | 645 | 4.47e-13 | 70.1 |
| Msa1250430 | MtrunA17_Chr1g0185621 | 30.556 | 144 | 85 | 3 | 162 | 292 | 475 | 616 | 3.42e-12 | 67.4 |
| Msa1250430 | MtrunA17_Chr8g0346151 | 30.726 | 179 | 103 | 7 | 145 | 305 | 260 | 435 | 4.22e-12 | 67.0 |
| Msa1250430 | MtrunA17_Chr7g0260841 | 36.364 | 88 | 53 | 1 | 133 | 217 | 323 | 410 | 1.17e-11 | 65.5 |
| Msa1250430 | MtrunA17_Chr8g0365711 | 25.316 | 237 | 147 | 5 | 97 | 308 | 167 | 398 | 2.90e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250430 | AT2G22760.1 | 41.206 | 199 | 105 | 5 | 142 | 331 | 100 | 295 | 5.02e-37 | 135 |
| Msa1250430 | AT4G37850.2 | 37.321 | 209 | 120 | 4 | 132 | 334 | 125 | 328 | 5.64e-35 | 130 |
| Msa1250430 | AT4G37850.1 | 37.321 | 209 | 120 | 4 | 132 | 334 | 125 | 328 | 5.64e-35 | 130 |
| Msa1250430 | AT2G22760.2 | 42.135 | 178 | 92 | 4 | 142 | 311 | 100 | 274 | 1.54e-32 | 122 |
| Msa1250430 | AT2G22750.2 | 37.864 | 206 | 114 | 4 | 130 | 326 | 97 | 297 | 7.00e-30 | 116 |
| Msa1250430 | AT2G22750.5 | 38.049 | 205 | 113 | 4 | 131 | 326 | 122 | 321 | 7.86e-30 | 116 |
| Msa1250430 | AT2G22750.3 | 38.049 | 205 | 113 | 4 | 131 | 326 | 126 | 325 | 7.86e-30 | 116 |
| Msa1250430 | AT2G22770.1 | 32.377 | 244 | 132 | 7 | 112 | 329 | 81 | 317 | 2.85e-29 | 115 |
| Msa1250430 | AT2G22750.4 | 38.049 | 205 | 112 | 5 | 131 | 326 | 126 | 324 | 1.07e-28 | 113 |
| Msa1250430 | AT2G22750.1 | 37.864 | 206 | 113 | 5 | 130 | 326 | 97 | 296 | 1.18e-28 | 112 |
| Msa1250430 | AT5G46760.1 | 29.798 | 198 | 112 | 7 | 142 | 315 | 398 | 592 | 7.53e-15 | 75.9 |
| Msa1250430 | AT1G01260.1 | 26.347 | 167 | 101 | 3 | 142 | 308 | 416 | 560 | 2.35e-14 | 74.3 |
| Msa1250430 | AT1G01260.2 | 26.347 | 167 | 101 | 3 | 142 | 308 | 416 | 560 | 2.35e-14 | 74.3 |
| Msa1250430 | AT1G01260.3 | 26.347 | 167 | 101 | 3 | 142 | 308 | 416 | 560 | 2.35e-14 | 74.3 |
| Msa1250430 | AT4G17880.1 | 33.333 | 162 | 95 | 4 | 142 | 293 | 399 | 557 | 3.01e-14 | 73.9 |
| Msa1250430 | AT2G46510.1 | 43.333 | 90 | 46 | 2 | 142 | 231 | 378 | 462 | 6.78e-14 | 72.8 |
| Msa1250430 | AT1G32640.1 | 31.429 | 175 | 82 | 7 | 142 | 293 | 435 | 594 | 9.83e-13 | 69.3 |
| Msa1250430 | AT4G16430.1 | 34.091 | 132 | 80 | 3 | 97 | 226 | 258 | 384 | 1.00e-11 | 66.2 |
Find 61 sgRNAs with CRISPR-Local
Find 363 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAAATCCATTATGATTT+TGG | 0.102337 | 8_2:+46074004 | None:intergenic |
| ACGCTGATAACCCATAAAAT+TGG | 0.197823 | 8_2:+46077148 | None:intergenic |
| ATGCTGACATGCGTAGGTTT+TGG | 0.272226 | 8_2:+46073763 | None:intergenic |
| TAAATTCAGGGCCGTTCTTT+GGG | 0.275933 | 8_2:-46079267 | Msa1250430:intron |
| GATGGACAAGACTTCAATAT+TGG | 0.295753 | 8_2:-46074241 | Msa1250430:CDS |
| CCATAAAATTGGGTTGGGTT+TGG | 0.308294 | 8_2:+46077159 | None:intergenic |
| GATGACTGATCAGTGCATTT+TGG | 0.326749 | 8_2:-46079418 | Msa1250430:CDS |
| TTAAATTCAGGGCCGTTCTT+TGG | 0.328016 | 8_2:-46079268 | Msa1250430:intron |
| TGTCGTCAATAACAATGTTA+TGG | 0.377578 | 8_2:-46073944 | Msa1250430:CDS |
| ATCCAATGCCAAAATCATAA+TGG | 0.388524 | 8_2:-46074012 | Msa1250430:CDS |
| ATAGTACGTATACCTTCATT+AGG | 0.395666 | 8_2:+46076953 | None:intergenic |
| CAAAGAACTTAAAGAGCGTT+TGG | 0.403840 | 8_2:-46074199 | Msa1250430:CDS |
| ATAACAATGTTATGGCCCTT+GGG | 0.410525 | 8_2:-46073936 | Msa1250430:CDS |
| CGCTGATAACCCATAAAATT+GGG | 0.416638 | 8_2:+46077149 | None:intergenic |
| ATAACCCATAAAATTGGGTT+GGG | 0.425291 | 8_2:+46077154 | None:intergenic |
| AGGCTACAACTTGACCATAA+AGG | 0.431305 | 8_2:-46073793 | Msa1250430:CDS |
| AATAACAATGTTATGGCCCT+TGG | 0.435181 | 8_2:-46073937 | Msa1250430:CDS |
| TCAGCGTCATTGCCAGAGTT+AGG | 0.436685 | 8_2:-46077132 | Msa1250430:CDS |
| AAATTTGTGTTTCCTAACTC+TGG | 0.446748 | 8_2:+46077120 | None:intergenic |
| TACTCTTAGCAAGGAAGAAA+CGG | 0.451484 | 8_2:-46077286 | Msa1250430:CDS |
| AGTGCAAAGCTCAACCGAGC+TGG | 0.457803 | 8_2:-46079243 | Msa1250430:CDS |
| CTGGAAAACATATCTTGATT+CGG | 0.463404 | 8_2:-46074035 | Msa1250430:CDS |
| AACGTGGAAGCAAAAGTGTC+TGG | 0.466740 | 8_2:-46074054 | Msa1250430:CDS |
| ACGTATACCTTCATTAGGTT+AGG | 0.467063 | 8_2:+46076958 | None:intergenic |
| CTGCAAGAGCAATGAAGCAT+TGG | 0.472965 | 8_2:+46076989 | None:intergenic |
| ATCCTTTACCTCAGCAATGA+TGG | 0.474722 | 8_2:+46073894 | None:intergenic |
| TCAGTTTCACAACAGAGGTC+TGG | 0.484300 | 8_2:+46074114 | None:intergenic |
| TTCCACGTTGAAGAGTGATT+CGG | 0.496598 | 8_2:+46074068 | None:intergenic |
| TCAAGCTCAAGATAATGTTA+AGG | 0.497492 | 8_2:-46077040 | Msa1250430:CDS |
| TATTAATTTGCAGGAAATGG+TGG | 0.500169 | 8_2:-46077430 | Msa1250430:intron |
| GATAACCCATAAAATTGGGT+TGG | 0.506362 | 8_2:+46077153 | None:intergenic |
| TGCAAGAGCAATGAAGCATT+GGG | 0.511292 | 8_2:+46076990 | None:intergenic |
| GTCAAAAGACAGAATTTGAA+AGG | 0.511653 | 8_2:+46077185 | None:intergenic |
| TTCTTCCTTGCTAAGAGTAG+AGG | 0.512428 | 8_2:+46077290 | None:intergenic |
| TTGAGGCCCGTCACTTTGAG+AGG | 0.515251 | 8_2:+46079219 | None:intergenic |
| GTGCAAAGCTCAACCGAGCT+GGG | 0.524134 | 8_2:-46079242 | Msa1250430:CDS |
| TCTCCTTCCTAACCTAATGA+AGG | 0.556220 | 8_2:-46076965 | Msa1250430:intron |
| CACTTTCAGTTTCACAACAG+AGG | 0.563363 | 8_2:+46074109 | None:intergenic |
| CATTTCCTCTACTCTTAGCA+AGG | 0.565542 | 8_2:-46077295 | Msa1250430:CDS |
| TAACAATGTTATGGCCCTTG+GGG | 0.572849 | 8_2:-46073935 | Msa1250430:CDS |
| TCACTTTGAGAGGCCCAGCT+CGG | 0.576279 | 8_2:+46079229 | None:intergenic |
| AAATTCAGGGCCGTTCTTTG+GGG | 0.579053 | 8_2:-46079266 | Msa1250430:intron |
| ATTATTGTATAGATTGGCGA+AGG | 0.585734 | 8_2:-46073813 | Msa1250430:intron |
| ATACCTTCATTAGGTTAGGA+AGG | 0.585833 | 8_2:+46076962 | None:intergenic |
| CTGAGTCAAACATTGTTGCA+TGG | 0.587333 | 8_2:+46077323 | None:intergenic |
| ACTTCAATGCTGACATGCGT+AGG | 0.590313 | 8_2:+46073757 | None:intergenic |
| AGAAGAGGGGAAGAAATCAA+AGG | 0.590831 | 8_2:-46074166 | Msa1250430:CDS |
| CACAATCTGTGTCATGTGAA+AGG | 0.591624 | 8_2:+46077373 | None:intergenic |
| CACGTTGAAGAGTGATTCGG+TGG | 0.598314 | 8_2:+46074071 | None:intergenic |
| GCTTTGCACTCCCCAAAGAA+CGG | 0.606741 | 8_2:+46079256 | None:intergenic |
| CATGCAACAATGTTTGACTC+AGG | 0.621521 | 8_2:-46077322 | Msa1250430:CDS |
| ATCAAAGGAAGATCAGTCGA+TGG | 0.644964 | 8_2:-46074151 | Msa1250430:CDS |
| AAAAGACAGAATTTGAAAGG+AGG | 0.648417 | 8_2:+46077188 | None:intergenic |
| TGTCGACGATAGAATCCCCA+AGG | 0.650856 | 8_2:+46073920 | None:intergenic |
| CGACATTACCATCATTGCTG+AGG | 0.653958 | 8_2:-46073902 | Msa1250430:intron |
| AAAGGAAGATCAGTCGATGG+TGG | 0.662321 | 8_2:-46074148 | Msa1250430:CDS |
| ATACAACTTATTTGACGAGG+AGG | 0.673794 | 8_2:-46077403 | Msa1250430:CDS |
| TGAATACAACTTATTTGACG+AGG | 0.701979 | 8_2:-46077406 | Msa1250430:CDS |
| CACCGAATCACTCTTCAACG+TGG | 0.725741 | 8_2:-46074070 | Msa1250430:CDS |
| GTCGACGATAGAATCCCCAA+GGG | 0.728713 | 8_2:+46073921 | None:intergenic |
| GGTCTGTGTCTGTTCCACTG+AGG | 0.769095 | 8_2:+46077344 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGAATTTTCAATTATTTATT+GGG | + | chr8_2:46076621-46076640 | None:intergenic | 10.0% |
| !!! | TTGAATTTTCAATTATTTAT+TGG | + | chr8_2:46076622-46076641 | None:intergenic | 10.0% |
| !!! | TTGTTAGTTATTTTATTATA+TGG | + | chr8_2:46076829-46076848 | None:intergenic | 10.0% |
| !!! | GTTATTATTTTTTTTATAGA+GGG | + | chr8_2:46077216-46077235 | None:intergenic | 10.0% |
| !!! | TGTTATTATTTTTTTTATAG+AGG | + | chr8_2:46077217-46077236 | None:intergenic | 10.0% |
| !!! | ATAATTGCTAATTTTGATTT+CGG | - | chr8_2:46074095-46074114 | Msa1250430:CDS | 15.0% |
| !!! | AAATTGTGCATTTTTTTATT+AGG | - | chr8_2:46074178-46074197 | Msa1250430:CDS | 15.0% |
| !!! | AATTGTGCATTTTTTTATTA+GGG | - | chr8_2:46074179-46074198 | Msa1250430:CDS | 15.0% |
| !! | TTAAATACACATATAAACAA+AGG | + | chr8_2:46074298-46074317 | None:intergenic | 15.0% |
| !! | ACCAATATAACATTTATTTA+TGG | - | chr8_2:46074408-46074427 | Msa1250430:intron | 15.0% |
| !! | CCAATATAACATTTATTTAT+GGG | - | chr8_2:46074409-46074428 | Msa1250430:intron | 15.0% |
| !! | TAGTGGAAAAAATAAATAAA+GGG | + | chr8_2:46074613-46074632 | None:intergenic | 15.0% |
| !! | TTAGTGGAAAAAATAAATAA+AGG | + | chr8_2:46074614-46074633 | None:intergenic | 15.0% |
| !! | TATGTATTAATTATAGTTAG+TGG | + | chr8_2:46074675-46074694 | None:intergenic | 15.0% |
| !!! | ATTAGTAATGTTGATTTTAA+TGG | + | chr8_2:46074724-46074743 | None:intergenic | 15.0% |
| !!! | AGACAAAACTTTTTTTAAAA+GGG | - | chr8_2:46074857-46074876 | Msa1250430:intron | 15.0% |
| !!! | TTTTTTTTTTGTTCAAATGT+AGG | - | chr8_2:46074985-46075004 | Msa1250430:intron | 15.0% |
| !!! | TTTTTTTTCTTTTTCTTTTG+AGG | - | chr8_2:46075060-46075079 | Msa1250430:intron | 15.0% |
| !!! | TTTTTTTCTTTTTCTTTTGA+GGG | - | chr8_2:46075061-46075080 | Msa1250430:intron | 15.0% |
| !! | AGTATAACTTATAAGATAAA+AGG | + | chr8_2:46075660-46075679 | None:intergenic | 15.0% |
| !!! | AACTTTTCACAAAAATATTA+TGG | - | chr8_2:46075932-46075951 | Msa1250430:intron | 15.0% |
| !!! | CTTTTTATTCTTTTTTTTAG+AGG | + | chr8_2:46076666-46076685 | None:intergenic | 15.0% |
| !!! | ATACAAAAGTGTATATAATA+CGG | + | chr8_2:46077134-46077153 | None:intergenic | 15.0% |
| !!! | ATTAGGATTAATTATAGTTT+TGG | - | chr8_2:46077331-46077350 | Msa1250430:CDS | 15.0% |
| !! | AAGTTACATGATTATATTAA+AGG | - | chr8_2:46077625-46077644 | Msa1250430:intron | 15.0% |
| !!! | ACATTTAAAGTTAAAGTTAA+CGG | + | chr8_2:46077767-46077786 | None:intergenic | 15.0% |
| !! | TTAAAAATTAATAGGATCTA+TGG | + | chr8_2:46077820-46077839 | None:intergenic | 15.0% |
| !!! | TAATATGTGTTTTTTGTCAA+GGG | + | chr8_2:46073850-46073869 | None:intergenic | 20.0% |
| !!! | TTAATATGTGTTTTTTGTCA+AGG | + | chr8_2:46073851-46073870 | None:intergenic | 20.0% |
| !!! | TTATTTTTCTTTTTTGAGTG+GGG | + | chr8_2:46073992-46074011 | None:intergenic | 20.0% |
| !!! | CTTATTTTTCTTTTTTGAGT+GGG | + | chr8_2:46073993-46074012 | None:intergenic | 20.0% |
| !!! | ATTGTGCATTTTTTTATTAG+GGG | - | chr8_2:46074180-46074199 | Msa1250430:CDS | 20.0% |
| !! | GACAAATAAAAATAGTAAAC+AGG | + | chr8_2:46074377-46074396 | None:intergenic | 20.0% |
| !! | CCCATAAATAAATGTTATAT+TGG | + | chr8_2:46074412-46074431 | None:intergenic | 20.0% |
| !!! | CAATACATTATTTCTACATT+TGG | + | chr8_2:46074472-46074491 | None:intergenic | 20.0% |
| !!! | GAGACAAAACTTTTTTTAAA+AGG | - | chr8_2:46074856-46074875 | Msa1250430:intron | 20.0% |
| !!! | TTAAAAGGGTGTTTATAATT+AGG | - | chr8_2:46074871-46074890 | Msa1250430:intron | 20.0% |
| !!! | TAAAAGGGTGTTTATAATTA+GGG | - | chr8_2:46074872-46074891 | Msa1250430:intron | 20.0% |
| !!! | TTTTTTCTTTTTCTTTTGAG+GGG | - | chr8_2:46075062-46075081 | Msa1250430:intron | 20.0% |
| !!! | TAATTTAACTTAACTCAACA+AGG | + | chr8_2:46075103-46075122 | None:intergenic | 20.0% |
| !! | GATTAATTAATGCTTTCAAT+GGG | + | chr8_2:46075287-46075306 | None:intergenic | 20.0% |
| !! | ATTAATTCATTAAAAGAAGC+AGG | + | chr8_2:46075343-46075362 | None:intergenic | 20.0% |
| !!! | TTCTTTGATTATTAATTTGC+AGG | - | chr8_2:46075718-46075737 | Msa1250430:intron | 20.0% |
| !!! | TTTTTTTGAAGATCTTTTTG+AGG | + | chr8_2:46076074-46076093 | None:intergenic | 20.0% |
| !! | ATAGTTGTACAAATATCTAA+GGG | + | chr8_2:46076941-46076960 | None:intergenic | 20.0% |
| !! | AATAGTTGTACAAATATCTA+AGG | + | chr8_2:46076942-46076961 | None:intergenic | 20.0% |
| !! | AGAAAGGTAAAAATATAATG+CGG | + | chr8_2:46077000-46077019 | None:intergenic | 20.0% |
| !! | TTACAAAGAAAACTGTATAT+TGG | + | chr8_2:46077045-46077064 | None:intergenic | 20.0% |
| !!! | CAGTTTTCTTTGTAAAAATA+TGG | - | chr8_2:46077050-46077069 | Msa1250430:CDS | 20.0% |
| !! | CCTAATAAATAAAGTGATAT+GGG | + | chr8_2:46077317-46077336 | None:intergenic | 20.0% |
| !! | TCCTAATAAATAAAGTGATA+TGG | + | chr8_2:46077318-46077337 | None:intergenic | 20.0% |
| !!! | GATTCGTTATTGTTTTTTAT+AGG | - | chr8_2:46077513-46077532 | Msa1250430:intron | 20.0% |
| !! | TGAAAACAACAAATTAGTTA+GGG | + | chr8_2:46078814-46078833 | None:intergenic | 20.0% |
| !! | ATGAAAACAACAAATTAGTT+AGG | + | chr8_2:46078813-46078832 | None:intergenic | 20.0% |
| !!! | CTAATTTGTTGTTTTCATTT+TGG | - | chr8_2:46077673-46077692 | Msa1250430:intron | 20.0% |
| !!! | TCGTTGATTTTAAAACTTAT+GGG | + | chr8_2:46078784-46078803 | None:intergenic | 20.0% |
| !!! | ATCGTTGATTTTAAAACTTA+TGG | + | chr8_2:46078783-46078802 | None:intergenic | 20.0% |
| !!! | AAGTTTTAAAATCAACGATT+TGG | - | chr8_2:46077702-46077721 | Msa1250430:intron | 20.0% |
| !! | TTAACTTTAAATGTCTAAAG+TGG | - | chr8_2:46077773-46077792 | Msa1250430:intron | 20.0% |
| !!! | TTTTTTTAAACAATGACCAT+TGG | - | chr8_2:46077860-46077879 | Msa1250430:intron | 20.0% |
| !! | AAAGTGAAAAAAATTAGAAG+TGG | + | chr8_2:46078059-46078078 | None:intergenic | 20.0% |
| !! | TTATACTGTCAAAAAAAAAG+AGG | - | chr8_2:46078224-46078243 | Msa1250430:intron | 20.0% |
| !! | AAATCTCAAAAACAAAATCT+AGG | - | chr8_2:46078268-46078287 | Msa1250430:intron | 20.0% |
| !!! | AAGTTTTAAAATCAACGATT+TGG | + | chr8_2:46077702-46077721 | None:intergenic | 20.0% |
| !!! | ATCGTTGATTTTAAAACTTA+TGG | - | chr8_2:46078783-46078802 | Msa1250430:intron | 20.0% |
| !!! | TCGTTGATTTTAAAACTTAT+GGG | - | chr8_2:46078784-46078803 | Msa1250430:intron | 20.0% |
| !!! | CTAATTTGTTGTTTTCATTT+TGG | + | chr8_2:46077673-46077692 | None:intergenic | 20.0% |
| !! | ATGAAAACAACAAATTAGTT+AGG | - | chr8_2:46078813-46078832 | Msa1250430:intron | 20.0% |
| !! | TGAAAACAACAAATTAGTTA+GGG | - | chr8_2:46078814-46078833 | Msa1250430:intron | 20.0% |
| !!! | CTAATAAACAGATTTTACAT+CGG | + | chr8_2:46078897-46078916 | None:intergenic | 20.0% |
| !! | TGTAAAATCTGTTTATTAGA+TGG | - | chr8_2:46078898-46078917 | Msa1250430:intron | 20.0% |
| !!! | TTCTTTTTACTTCAATGAAA+AGG | - | chr8_2:46079287-46079306 | Msa1250430:intron | 20.0% |
| !!! | TTGATAGTGCAATTAAATTC+AGG | - | chr8_2:46073877-46073896 | Msa1250430:intron | 25.0% |
| !! | TGATAGTGCAATTAAATTCA+GGG | - | chr8_2:46073878-46073897 | Msa1250430:intron | 25.0% |
| !!! | GAGCAATAATTTTTTTCTTG+AGG | + | chr8_2:46073958-46073977 | None:intergenic | 25.0% |
| !!! | TATTTTTCTTTTTTGAGTGG+GGG | + | chr8_2:46073991-46074010 | None:intergenic | 25.0% |
| !!! | GCTTATTTTTCTTTTTTGAG+TGG | + | chr8_2:46073994-46074013 | None:intergenic | 25.0% |
| ! | TAGAAACTGAAACAAAAAAC+AGG | + | chr8_2:46074016-46074035 | None:intergenic | 25.0% |
| ! | TTAGCTTAGAAATAGAAACA+TGG | + | chr8_2:46074055-46074074 | None:intergenic | 25.0% |
| ! | GTTAATAATCATTATACGAG+TGG | - | chr8_2:46074120-46074139 | Msa1250430:CDS | 25.0% |
| ! | AAATTGACACATTAATTGCA+GGG | + | chr8_2:46074251-46074270 | None:intergenic | 25.0% |
| ! | AAAATTGACACATTAATTGC+AGG | + | chr8_2:46074252-46074271 | None:intergenic | 25.0% |
| ! | AATTGAATGCACAAAGTTTA+AGG | - | chr8_2:46074530-46074549 | Msa1250430:intron | 25.0% |
| ! | ATTGAATGCACAAAGTTTAA+GGG | - | chr8_2:46074531-46074550 | Msa1250430:intron | 25.0% |
| ! | AATAACGTGTAAAACTCAAA+AGG | - | chr8_2:46074752-46074771 | Msa1250430:intron | 25.0% |
| ! | ATAACGTGTAAAACTCAAAA+GGG | - | chr8_2:46074753-46074772 | Msa1250430:intron | 25.0% |
| ! | TGTAGGTAGTATTAATATCA+CGG | - | chr8_2:46075002-46075021 | Msa1250430:intron | 25.0% |
| ! | ATTATCGACAATATGCAAAT+AGG | - | chr8_2:46075031-46075050 | Msa1250430:intron | 25.0% |
| !! | AAAATGTATAGTTCTACTTC+TGG | + | chr8_2:46075230-46075249 | None:intergenic | 25.0% |
| ! | CGATTAATTAATGCTTTCAA+TGG | + | chr8_2:46075288-46075307 | None:intergenic | 25.0% |
| ! | ATGCATTTGAAAGATAAGAA+GGG | + | chr8_2:46075561-46075580 | None:intergenic | 25.0% |
| ! | TATGCATTTGAAAGATAAGA+AGG | + | chr8_2:46075562-46075581 | None:intergenic | 25.0% |
| ! | CAGAATCAAATGCTATATTA+AGG | + | chr8_2:46075634-46075653 | None:intergenic | 25.0% |
| !!! | GATTATTAATTTGCAGGAAA+TGG | - | chr8_2:46075724-46075743 | Msa1250430:intron | 25.0% |
| ! | CAAAAAAATCAAAAGCAAAG+AGG | - | chr8_2:46076086-46076105 | Msa1250430:intron | 25.0% |
| !! | TGTATTGACCTAATCAAAAT+TGG | + | chr8_2:46077285-46077304 | None:intergenic | 25.0% |
| !! | CCCATATCACTTTATTTATT+AGG | - | chr8_2:46077314-46077333 | Msa1250430:CDS | 25.0% |
| !! | TCTGACTTTCTATTTTCATA+GGG | + | chr8_2:46077390-46077409 | None:intergenic | 25.0% |
| !! | ATCTGACTTTCTATTTTCAT+AGG | + | chr8_2:46077391-46077410 | None:intergenic | 25.0% |
| ! | TAAAGGCTTAATTCGATATT+TGG | - | chr8_2:46077642-46077661 | Msa1250430:intron | 25.0% |
| ! | GAAAACAACAAATTAGTTAG+GGG | + | chr8_2:46078815-46078834 | None:intergenic | 25.0% |
| ! | AAAACTGAAGCAAAAATTGA+GGG | + | chr8_2:46078755-46078774 | None:intergenic | 25.0% |
| !! | TTTTGCTTCAGTTTTCAAAA+AGG | - | chr8_2:46077734-46077753 | Msa1250430:intron | 25.0% |
| ! | AAAATTAATAGGATCTATGG+TGG | + | chr8_2:46077817-46077836 | None:intergenic | 25.0% |
| !! | AGATGAATTTCTGGAAAATA+AGG | + | chr8_2:46078015-46078034 | None:intergenic | 25.0% |
| ! | TGATGTAGTTTATTGATGAA+TGG | + | chr8_2:46078193-46078212 | None:intergenic | 25.0% |
| ! | TCAAAAACAAAATCTAGGTT+CGG | - | chr8_2:46078273-46078292 | Msa1250430:intron | 25.0% |
| !! | TATAAAGTTTTGCACAAACT+GGG | + | chr8_2:46078436-46078455 | None:intergenic | 25.0% |
| !!! | ATTTGGGTTTTGAGATTAAT+GGG | + | chr8_2:46078574-46078593 | None:intergenic | 25.0% |
| ! | CTGACAAAAATAAAGGATTT+GGG | + | chr8_2:46078590-46078609 | None:intergenic | 25.0% |
| ! | AAAACTGAAGCAAAAATTGA+AGG | - | chr8_2:46078755-46078774 | Msa1250430:intron | 25.0% |
| ! | GAAAACAACAAATTAGTTAG+GGG | - | chr8_2:46078815-46078834 | Msa1250430:intron | 25.0% |
| ! | TATAGGCTTAATTCGATATT+TGG | + | chr8_2:46078842-46078861 | None:intergenic | 25.0% |
| !! | CAAGAAATCCATTATGATTT+TGG | + | chr8_2:46079156-46079175 | None:intergenic | 25.0% |
| ! | CTTCTCATTATTGTATAGAT+TGG | - | chr8_2:46079338-46079357 | Msa1250430:intron | 25.0% |
| !! | GTTTAAAGTTGATATCAGCT+CGG | + | chr8_2:46073807-46073826 | None:intergenic | 30.0% |
| !!! | ATTGCTAATTTTGATTTCGG+TGG | - | chr8_2:46074098-46074117 | Msa1250430:CDS | 30.0% |
| TCGGTTCTCATAGTAAAAAT+AGG | + | chr8_2:46074206-46074225 | None:intergenic | 30.0% | |
| ! | GTTTCTAACTTGTGCTTTAA+GGG | + | chr8_2:46074450-46074469 | None:intergenic | 30.0% |
| AATGAGTAAAACTACGTTAG+TGG | + | chr8_2:46074630-46074649 | None:intergenic | 30.0% | |
| AGACTGATGAAGTAGTATTT+AGG | - | chr8_2:46074788-46074807 | Msa1250430:intron | 30.0% | |
| GACTGATGAAGTAGTATTTA+GGG | - | chr8_2:46074789-46074808 | Msa1250430:intron | 30.0% | |
| ! | GTAGTATTTAGGGTTATGTT+TGG | - | chr8_2:46074799-46074818 | Msa1250430:intron | 30.0% |
| ATACACTCAATATGCAATGT+AGG | - | chr8_2:46074954-46074973 | Msa1250430:intron | 30.0% | |
| TTGGTTATGATCTTATCTAG+TGG | - | chr8_2:46075376-46075395 | Msa1250430:intron | 30.0% | |
| GTACAAAATATAAGAGACAG+TGG | - | chr8_2:46075461-46075480 | Msa1250430:intron | 30.0% | |
| TGATAATACGTTCATTGATG+TGG | + | chr8_2:46075499-46075518 | None:intergenic | 30.0% | |
| !! | TATTAATTTGCAGGAAATGG+TGG | - | chr8_2:46075727-46075746 | Msa1250430:intron | 30.0% |
| TGAATACAACTTATTTGACG+AGG | - | chr8_2:46075751-46075770 | Msa1250430:intron | 30.0% | |
| AAAAGACAGAATTTGAAAGG+AGG | + | chr8_2:46075972-46075991 | None:intergenic | 30.0% | |
| GTCAAAAGACAGAATTTGAA+AGG | + | chr8_2:46075975-46075994 | None:intergenic | 30.0% | |
| ATAACCCATAAAATTGGGTT+GGG | + | chr8_2:46076006-46076025 | None:intergenic | 30.0% | |
| AAATTTGTGTTTCCTAACTC+TGG | + | chr8_2:46076040-46076059 | None:intergenic | 30.0% | |
| TCAAGCTCAAGATAATGTTA+AGG | - | chr8_2:46076117-46076136 | Msa1250430:intron | 30.0% | |
| ATAGTACGTATACCTTCATT+AGG | + | chr8_2:46076207-46076226 | None:intergenic | 30.0% | |
| GAAATGACTGGATCAAAATT+TGG | + | chr8_2:46076358-46076377 | None:intergenic | 30.0% | |
| CAAATACTAAGAGAAATGAC+TGG | + | chr8_2:46076370-46076389 | None:intergenic | 30.0% | |
| !! | CTCTAACGTTATTTTACACA+TGG | + | chr8_2:46076521-46076540 | None:intergenic | 30.0% |
| TTGTAACAAATGTGTTTGAC+TGG | - | chr8_2:46076729-46076748 | Msa1250430:intron | 30.0% | |
| AGCCAAAAACACATAAAGAT+GGG | + | chr8_2:46076784-46076803 | None:intergenic | 30.0% | |
| AAGCCAAAAACACATAAAGA+TGG | + | chr8_2:46076785-46076804 | None:intergenic | 30.0% | |
| TACCTTTCTCTCTATTACTT+TGG | - | chr8_2:46077011-46077030 | Msa1250430:CDS | 30.0% | |
| AACCAAAGTAATAGAGAGAA+AGG | + | chr8_2:46077016-46077035 | None:intergenic | 30.0% | |
| CCATTTGTTTGACAATCTAA+TGG | + | chr8_2:46077080-46077099 | None:intergenic | 30.0% | |
| CCATTAGATTGTCAAACAAA+TGG | - | chr8_2:46077077-46077096 | Msa1250430:CDS | 30.0% | |
| ! | ACACTTTTGTATTTTGCATC+AGG | - | chr8_2:46077142-46077161 | Msa1250430:CDS | 30.0% |
| TGCAAAAGGGTTAAACTTAT+GGG | + | chr8_2:46077246-46077265 | None:intergenic | 30.0% | |
| ! | ACCTAATCAAAATTGGTCTA+GGG | + | chr8_2:46077278-46077297 | None:intergenic | 30.0% |
| ! | CTGACTTTCTATTTTCATAG+GGG | + | chr8_2:46077389-46077408 | None:intergenic | 30.0% |
| GAAAACTGAAGCAAAAATTG+AGG | + | chr8_2:46078754-46078773 | None:intergenic | 30.0% | |
| TTGTGATGAAGATGAATTTC+TGG | + | chr8_2:46078024-46078043 | None:intergenic | 30.0% | |
| !! | AAAAGGTTGATGAAGGTTTA+AGG | + | chr8_2:46078105-46078124 | None:intergenic | 30.0% |
| TACTGTCAAAAAAAAAGAGG+AGG | - | chr8_2:46078227-46078246 | Msa1250430:intron | 30.0% | |
| ! | ACGTTTTTGAATTGGGTTTA+TGG | + | chr8_2:46078340-46078359 | None:intergenic | 30.0% |
| ! | CTATAAAGTTTTGCACAAAC+TGG | + | chr8_2:46078437-46078456 | None:intergenic | 30.0% |
| TTGATGTTGTGAAGTAGATT+TGG | + | chr8_2:46078508-46078527 | None:intergenic | 30.0% | |
| GATTAAATCAATTTGAGAGG+GGG | + | chr8_2:46078537-46078556 | None:intergenic | 30.0% | |
| GGATTAAATCAATTTGAGAG+GGG | + | chr8_2:46078538-46078557 | None:intergenic | 30.0% | |
| GGGATTAAATCAATTTGAGA+GGG | + | chr8_2:46078539-46078558 | None:intergenic | 30.0% | |
| AGGGATTAAATCAATTTGAG+AGG | + | chr8_2:46078540-46078559 | None:intergenic | 30.0% | |
| TTAATGGGATGAATTAGCTA+GGG | + | chr8_2:46078559-46078578 | None:intergenic | 30.0% | |
| ATTAATGGGATGAATTAGCT+AGG | + | chr8_2:46078560-46078579 | None:intergenic | 30.0% | |
| !!! | GATTTGGGTTTTGAGATTAA+TGG | + | chr8_2:46078575-46078594 | None:intergenic | 30.0% |
| CCTGACAAAAATAAAGGATT+TGG | + | chr8_2:46078591-46078610 | None:intergenic | 30.0% | |
| !!! | CCAAATCCTTTATTTTTGTC+AGG | - | chr8_2:46078588-46078607 | Msa1250430:intron | 30.0% |
| AGTTTGTGCAATTGAATTTC+TGG | - | chr8_2:46078620-46078639 | Msa1250430:intron | 30.0% | |
| GTTTGTGCAATTGAATTTCT+GGG | - | chr8_2:46078621-46078640 | Msa1250430:intron | 30.0% | |
| TTTGTGCAATTGAATTTCTG+GGG | - | chr8_2:46078622-46078641 | Msa1250430:intron | 30.0% | |
| TGGGGAGATTTAATACAAAT+TGG | - | chr8_2:46078640-46078659 | Msa1250430:intron | 30.0% | |
| GGGGAGATTTAATACAAATT+GGG | - | chr8_2:46078641-46078660 | Msa1250430:intron | 30.0% | |
| GGGAGATTTAATACAAATTG+GGG | - | chr8_2:46078642-46078661 | Msa1250430:intron | 30.0% | |
| !! | TTTGGCAATTTTAGAAGAAG+AGG | - | chr8_2:46078976-46078995 | Msa1250430:intron | 30.0% |
| !! | TTGGCAATTTTAGAAGAAGA+GGG | - | chr8_2:46078977-46078996 | Msa1250430:intron | 30.0% |
| CTGGAAAACATATCTTGATT+CGG | - | chr8_2:46079122-46079141 | Msa1250430:intron | 30.0% | |
| ATCCAATGCCAAAATCATAA+TGG | - | chr8_2:46079145-46079164 | Msa1250430:intron | 30.0% | |
| !! | ATCCATTATGATTTTGGCAT+TGG | + | chr8_2:46079150-46079169 | None:intergenic | 30.0% |
| TGTCGTCAATAACAATGTTA+TGG | - | chr8_2:46079213-46079232 | Msa1250430:intron | 30.0% | |
| ATTATTGTATAGATTGGCGA+AGG | - | chr8_2:46079344-46079363 | Msa1250430:intron | 30.0% | |
| ! | TCTTTTGACGATGAAGATGA+AGG | - | chr8_2:46073766-46073785 | Msa1250430:CDS | 35.0% |
| ! | GGTTTCTAACTTGTGCTTTA+AGG | + | chr8_2:46074451-46074470 | None:intergenic | 35.0% |
| ATTTCTTAACATGTGCCCTA+AGG | - | chr8_2:46074571-46074590 | Msa1250430:intron | 35.0% | |
| TTTCTTAACATGTGCCCTAA+GGG | - | chr8_2:46074572-46074591 | Msa1250430:intron | 35.0% | |
| ! | AGGGTTATGTTTGGAGTAAT+TGG | - | chr8_2:46074808-46074827 | Msa1250430:intron | 35.0% |
| ! | AGGGTGTTTATAATTAGGGA+TGG | - | chr8_2:46074876-46074895 | Msa1250430:intron | 35.0% |
| TCTATGTTATGCATAAGTCG+TGG | + | chr8_2:46075311-46075330 | None:intergenic | 35.0% | |
| !! | CTAGCTTTTCAATTCCTCAA+CGG | + | chr8_2:46075402-46075421 | None:intergenic | 35.0% |
| ACTTCACTTGCACTTTATAG+TGG | + | chr8_2:46075432-46075451 | None:intergenic | 35.0% | |
| CAAAATATAAGAGACAGTGG+AGG | - | chr8_2:46075464-46075483 | Msa1250430:intron | 35.0% | |
| !! | GTTGGTTATTTGACTTGGTA+AGG | - | chr8_2:46075529-46075548 | Msa1250430:intron | 35.0% |
| CTTGAGAGACATTGCATAAA+TGG | - | chr8_2:46075678-46075697 | Msa1250430:intron | 35.0% | |
| ATACAACTTATTTGACGAGG+AGG | - | chr8_2:46075754-46075773 | Msa1250430:intron | 35.0% | |
| TACTCTTAGCAAGGAAGAAA+CGG | - | chr8_2:46075871-46075890 | Msa1250430:intron | 35.0% | |
| !! | AGGAAGAAACGGATTTTGAT+TGG | - | chr8_2:46075882-46075901 | Msa1250430:intron | 35.0% |
| ! | CAAACCCAACCCAATTTTAT+GGG | - | chr8_2:46075999-46076018 | Msa1250430:intron | 35.0% |
| GATAACCCATAAAATTGGGT+TGG | + | chr8_2:46076007-46076026 | None:intergenic | 35.0% | |
| CGCTGATAACCCATAAAATT+GGG | + | chr8_2:46076011-46076030 | None:intergenic | 35.0% | |
| ACGCTGATAACCCATAAAAT+TGG | + | chr8_2:46076012-46076031 | None:intergenic | 35.0% | |
| ATACCTTCATTAGGTTAGGA+AGG | + | chr8_2:46076198-46076217 | None:intergenic | 35.0% | |
| ACGTATACCTTCATTAGGTT+AGG | + | chr8_2:46076202-46076221 | None:intergenic | 35.0% | |
| TATCCAATACACTGGATCAA+GGG | - | chr8_2:46076260-46076279 | Msa1250430:intron | 35.0% | |
| AATGTGTTTGACTGGTGTAA+TGG | - | chr8_2:46076737-46076756 | Msa1250430:intron | 35.0% | |
| ! | ACCCCATCTTTATGTGTTTT+TGG | - | chr8_2:46076779-46076798 | Msa1250430:intron | 35.0% |
| GCCAAAAACACATAAAGATG+GGG | + | chr8_2:46076783-46076802 | None:intergenic | 35.0% | |
| GTTGTACAAATATCTAAGGG+CGG | + | chr8_2:46076938-46076957 | None:intergenic | 35.0% | |
| ACGCAAGATTGTGATACTTA+GGG | + | chr8_2:46077187-46077206 | None:intergenic | 35.0% | |
| AACGCAAGATTGTGATACTT+AGG | + | chr8_2:46077188-46077207 | None:intergenic | 35.0% | |
| ! | GTATCACAATCTTGCGTTTT+TGG | - | chr8_2:46077190-46077209 | Msa1250430:CDS | 35.0% |
| GTGCAAAAGGGTTAAACTTA+TGG | + | chr8_2:46077247-46077266 | None:intergenic | 35.0% | |
| ! | GTTTAACCCTTTTGCACTTT+TGG | - | chr8_2:46077250-46077269 | Msa1250430:CDS | 35.0% |
| ! | CTAATCAAAATTGGTCTAGG+GGG | + | chr8_2:46077276-46077295 | None:intergenic | 35.0% |
| ! | CCTAATCAAAATTGGTCTAG+GGG | + | chr8_2:46077277-46077296 | None:intergenic | 35.0% |
| ! | GACCTAATCAAAATTGGTCT+AGG | + | chr8_2:46077279-46077298 | None:intergenic | 35.0% |
| TGATTAGGTCAATACATACG+TGG | - | chr8_2:46077289-46077308 | Msa1250430:CDS | 35.0% | |
| TGCAAAAGAGGGTAAACTTA+GGG | - | chr8_2:46077486-46077505 | Msa1250430:intron | 35.0% | |
| ! | GTATCACAATCTTGCGATTT+TGG | + | chr8_2:46077542-46077561 | None:intergenic | 35.0% |
| GCAAGATTGTGATACTTAGA+GGG | - | chr8_2:46077547-46077566 | Msa1250430:intron | 35.0% | |
| ! | TTCAGTTTTCAAAAAGGTCC+TGG | - | chr8_2:46077740-46077759 | Msa1250430:intron | 35.0% |
| AAAGTTAAAGTTAACGGTCC+AGG | + | chr8_2:46077761-46077780 | None:intergenic | 35.0% | |
| AAGTGGAACACAAACAATGT+TGG | - | chr8_2:46077790-46077809 | Msa1250430:intron | 35.0% | |
| ! | CGCAGGTCTATTTTATCTTA+TGG | - | chr8_2:46077887-46077906 | Msa1250430:intron | 35.0% |
| ACAACAACAACAATCAATCC+AGG | - | chr8_2:46077981-46078000 | Msa1250430:intron | 35.0% | |
| GAAGGTTTAAGGAAGAAGAA+TGG | + | chr8_2:46078094-46078113 | None:intergenic | 35.0% | |
| GAATGAAGAAGAAGAAGAAG+TGG | + | chr8_2:46078150-46078169 | None:intergenic | 35.0% | |
| AAAATCTAGGTTCGGATTTG+TGG | - | chr8_2:46078281-46078300 | Msa1250430:intron | 35.0% | |
| !! | GTTTATGGTTCAAGTTTTGC+TGG | + | chr8_2:46078325-46078344 | None:intergenic | 35.0% |
| ! | GGGTTTCACGTTTTTGAATT+GGG | + | chr8_2:46078347-46078366 | None:intergenic | 35.0% |
| ! | TGGGTTTCACGTTTTTGAAT+TGG | + | chr8_2:46078348-46078367 | None:intergenic | 35.0% |
| ! | GTTTCTAGAAGTTGGAAAAG+GGG | + | chr8_2:46078414-46078433 | None:intergenic | 35.0% |
| ! | GGTTTCTAGAAGTTGGAAAA+GGG | + | chr8_2:46078415-46078434 | None:intergenic | 35.0% |
| GAGAGAAGAAATTGGAAAAG+GGG | + | chr8_2:46078468-46078487 | None:intergenic | 35.0% | |
| CGAGAGAAGAAATTGGAAAA+GGG | + | chr8_2:46078469-46078488 | None:intergenic | 35.0% | |
| TCGAGAGAAGAAATTGGAAA+AGG | + | chr8_2:46078470-46078489 | None:intergenic | 35.0% | |
| AGGAATTCGAGAGAAGAAAT+TGG | + | chr8_2:46078476-46078495 | None:intergenic | 35.0% | |
| ! | AGTAGATTTGGAGATTTTGC+AGG | + | chr8_2:46078496-46078515 | None:intergenic | 35.0% |
| CCTCATCCTGACAAAAATAA+AGG | + | chr8_2:46078597-46078616 | None:intergenic | 35.0% | |
| !!! | CCTTTATTTTTGTCAGGATG+AGG | - | chr8_2:46078594-46078613 | Msa1250430:intron | 35.0% |
| TGAACAGTAACGAGAACAAA+TGG | - | chr8_2:46078677-46078696 | Msa1250430:intron | 35.0% | |
| CGAGAACAAATGGAATTTGA+CGG | - | chr8_2:46078687-46078706 | Msa1250430:intron | 35.0% | |
| GATTAACGACAGTTACTTGT+TGG | - | chr8_2:46078714-46078733 | Msa1250430:intron | 35.0% | |
| GATGGACAAGACTTCAATAT+TGG | - | chr8_2:46078916-46078935 | Msa1250430:intron | 35.0% | |
| !! | CAAAGAACTTAAAGAGCGTT+TGG | - | chr8_2:46078958-46078977 | Msa1250430:intron | 35.0% |
| !! | TGGCAATTTTAGAAGAAGAG+GGG | - | chr8_2:46078978-46078997 | Msa1250430:intron | 35.0% |
| AATAACAATGTTATGGCCCT+TGG | - | chr8_2:46079220-46079239 | Msa1250430:intron | 35.0% | |
| ATAACAATGTTATGGCCCTT+GGG | - | chr8_2:46079221-46079240 | Msa1250430:intron | 35.0% | |
| ACGATGAAGATGAAGGTGAA+GGG | - | chr8_2:46073773-46073792 | Msa1250430:CDS | 40.0% | |
| TTAAATTCAGGGCCGTTCTT+TGG | - | chr8_2:46073889-46073908 | Msa1250430:intron | 40.0% | |
| TAAATTCAGGGCCGTTCTTT+GGG | - | chr8_2:46073890-46073909 | Msa1250430:intron | 40.0% | |
| !!! | TTTCTTTTTTGAGTGGGGGT+GGG | + | chr8_2:46073987-46074006 | None:intergenic | 40.0% |
| !!! | TTTTCTTTTTTGAGTGGGGG+TGG | + | chr8_2:46073988-46074007 | None:intergenic | 40.0% |
| !! | AGTGTTAACTTGTGCCCTTA+GGG | + | chr8_2:46074589-46074608 | None:intergenic | 40.0% |
| !! | TAGTGTTAACTTGTGCCCTT+AGG | + | chr8_2:46074590-46074609 | None:intergenic | 40.0% |
| TACTTCATCAGTCTCACAGT+AGG | + | chr8_2:46074782-46074801 | None:intergenic | 40.0% | |
| ! | AGATTGATTCTCGACATCAC+AGG | - | chr8_2:46075126-46075145 | Msa1250430:intron | 40.0% |
| TATTATCACCAGACAGCAGT+TGG | - | chr8_2:46075511-46075530 | Msa1250430:intron | 40.0% | |
| TCAAATAACCAACTGCTGTC+TGG | + | chr8_2:46075522-46075541 | None:intergenic | 40.0% | |
| CAGCAGTTGGTTATTTGACT+TGG | - | chr8_2:46075524-46075543 | Msa1250430:intron | 40.0% | |
| CACAATCTGTGTCATGTGAA+AGG | + | chr8_2:46075787-46075806 | None:intergenic | 40.0% | |
| ! | AGATTGTGCATTTTCCTCAG+TGG | - | chr8_2:46075799-46075818 | Msa1250430:intron | 40.0% |
| CTGAGTCAAACATTGTTGCA+TGG | + | chr8_2:46075837-46075856 | None:intergenic | 40.0% | |
| CATGCAACAATGTTTGACTC+AGG | - | chr8_2:46075835-46075854 | Msa1250430:intron | 40.0% | |
| CATTTCCTCTACTCTTAGCA+AGG | - | chr8_2:46075862-46075881 | Msa1250430:intron | 40.0% | |
| TTCTTCCTTGCTAAGAGTAG+AGG | + | chr8_2:46075870-46075889 | None:intergenic | 40.0% | |
| !! | CCATAAAATTGGGTTGGGTT+TGG | + | chr8_2:46076001-46076020 | None:intergenic | 40.0% |
| ! | CCAAACCCAACCCAATTTTA+TGG | - | chr8_2:46075998-46076017 | Msa1250430:intron | 40.0% |
| ! | TGCAAGAGCAATGAAGCATT+GGG | + | chr8_2:46076170-46076189 | None:intergenic | 40.0% |
| TCTCCTTCCTAACCTAATGA+AGG | - | chr8_2:46076192-46076211 | Msa1250430:intron | 40.0% | |
| GTATCCAATACACTGGATCA+AGG | - | chr8_2:46076259-46076278 | Msa1250430:intron | 40.0% | |
| CACACATGCGCTTAATAATG+TGG | - | chr8_2:46076421-46076440 | Msa1250430:intron | 40.0% | |
| AAATATCTAAGGGCGGAGTT+AGG | + | chr8_2:46076931-46076950 | None:intergenic | 40.0% | |
| GCAAGATTGTGATACTTAGG+GGG | + | chr8_2:46077185-46077204 | None:intergenic | 40.0% | |
| CGCAAGATTGTGATACTTAG+GGG | + | chr8_2:46077546-46077565 | None:intergenic | 40.0% | |
| !!! | CCCCTAGACCAATTTTGATT+AGG | - | chr8_2:46077274-46077293 | Msa1250430:CDS | 40.0% |
| TCGCAAGATTGTGACACTTA+GGG | + | chr8_2:46077359-46077378 | None:intergenic | 40.0% | |
| ATCGCAAGATTGTGACACTT+AGG | + | chr8_2:46077360-46077379 | None:intergenic | 40.0% | |
| CATCCACATCACTTAAAGTG+AGG | + | chr8_2:46077420-46077439 | None:intergenic | 40.0% | |
| !! | TGCATTGACTCGGTCAAAAT+TGG | - | chr8_2:46077447-46077466 | Msa1250430:intron | 40.0% |
| ! | GTGGTCAAAAGTGCAAAAGA+GGG | - | chr8_2:46077475-46077494 | Msa1250430:intron | 40.0% |
| GTGCAAAAGAGGGTAAACTT+AGG | - | chr8_2:46077485-46077504 | Msa1250430:intron | 40.0% | |
| GCAAAAGAGGGTAAACTTAG+GGG | - | chr8_2:46077487-46077506 | Msa1250430:intron | 40.0% | |
| CAAAAGAGGGTAAACTTAGG+GGG | - | chr8_2:46077488-46077507 | Msa1250430:intron | 40.0% | |
| CGCAAGATTGTGATACTTAG+AGG | - | chr8_2:46077546-46077565 | Msa1250430:intron | 40.0% | |
| AATAGACCTGCGAAATCCAA+TGG | + | chr8_2:46077879-46077898 | None:intergenic | 40.0% | |
| GAAGATGATGAAGAAGAGTG+AGG | + | chr8_2:46077957-46077976 | None:intergenic | 40.0% | |
| GAAAATAAGGACTGCATTCC+TGG | + | chr8_2:46078002-46078021 | None:intergenic | 40.0% | |
| TGGATCGAACTAGAAGGAAA+GGG | + | chr8_2:46078130-46078149 | None:intergenic | 40.0% | |
| AAGAAGTGGATCGAACTAGA+AGG | + | chr8_2:46078136-46078155 | None:intergenic | 40.0% | |
| ! | ATGTTTTCACGTTGTCGAAC+TGG | + | chr8_2:46078375-46078394 | None:intergenic | 40.0% |
| ! | GGGTTTCTAGAAGTTGGAAA+AGG | + | chr8_2:46078416-46078435 | None:intergenic | 40.0% |
| ! | CAAACTGGGTTTCTAGAAGT+TGG | + | chr8_2:46078422-46078441 | None:intergenic | 40.0% |
| AGAAGAGGGGAAGAAATCAA+AGG | - | chr8_2:46078991-46079010 | Msa1250430:intron | 40.0% | |
| ATCAAAGGAAGATCAGTCGA+TGG | - | chr8_2:46079006-46079025 | Msa1250430:intron | 40.0% | |
| CACTTTCAGTTTCACAACAG+AGG | + | chr8_2:46079051-46079070 | None:intergenic | 40.0% | |
| TTCCACGTTGAAGAGTGATT+CGG | + | chr8_2:46079092-46079111 | None:intergenic | 40.0% | |
| TAACAATGTTATGGCCCTTG+GGG | - | chr8_2:46079222-46079241 | Msa1250430:intron | 40.0% | |
| TACCATCATTGCTGAGGTAA+AGG | - | chr8_2:46079261-46079280 | Msa1250430:CDS | 40.0% | |
| ATCCTTTACCTCAGCAATGA+TGG | + | chr8_2:46079266-46079285 | None:intergenic | 40.0% | |
| AGGCTACAACTTGACCATAA+AGG | - | chr8_2:46079364-46079383 | Msa1250430:intron | 40.0% | |
| !! | GTTTTGGACGAGTTCCTTTA+TGG | + | chr8_2:46079381-46079400 | None:intergenic | 40.0% |
| GACGATGAAGATGAAGGTGA+AGG | - | chr8_2:46073772-46073791 | Msa1250430:CDS | 45.0% | |
| AAATTCAGGGCCGTTCTTTG+GGG | - | chr8_2:46073891-46073910 | Msa1250430:intron | 45.0% | |
| !!! | TTCTTTTTTGAGTGGGGGTG+GGG | + | chr8_2:46073986-46074005 | None:intergenic | 45.0% |
| TACTCTCGTCGTCTCACAAT+AGG | - | chr8_2:46074348-46074367 | Msa1250430:intron | 45.0% | |
| TTTGAGGGGATGCAATGTGT+AGG | - | chr8_2:46075076-46075095 | Msa1250430:intron | 45.0% | |
| TAGATGTGCACCCTAGAGTT+GGG | + | chr8_2:46075176-46075195 | None:intergenic | 45.0% | |
| TTAGATGTGCACCCTAGAGT+TGG | + | chr8_2:46075177-46075196 | None:intergenic | 45.0% | |
| ATCTTATCTAGTGGCCGTTG+AGG | - | chr8_2:46075385-46075404 | Msa1250430:intron | 45.0% | |
| CTGCAAGAGCAATGAAGCAT+TGG | + | chr8_2:46076171-46076190 | None:intergenic | 45.0% | |
| GCAAGATTGTGACACTTAGG+GGG | + | chr8_2:46077357-46077376 | None:intergenic | 45.0% | |
| CGCAAGATTGTGACACTTAG+GGG | + | chr8_2:46077358-46077377 | None:intergenic | 45.0% | |
| GCACCTCACTTTAAGTGATG+TGG | - | chr8_2:46077414-46077433 | Msa1250430:CDS | 45.0% | |
| !! | ATGACACGCATGCATTGACT+CGG | - | chr8_2:46077437-46077456 | Msa1250430:intron | 45.0% |
| !! | TGACTCGGTCAAAATTGGTC+TGG | - | chr8_2:46077452-46077471 | Msa1250430:intron | 45.0% |
| ! | GACTCGGTCAAAATTGGTCT+GGG | - | chr8_2:46077453-46077472 | Msa1250430:intron | 45.0% |
| ! | GGTGGTCAAAAGTGCAAAAG+AGG | - | chr8_2:46077474-46077493 | Msa1250430:intron | 45.0% |
| CAATGACCATTGGATTTCGC+AGG | - | chr8_2:46077870-46077889 | Msa1250430:intron | 45.0% | |
| !! | AAGGGGGAAAAGGTTGATGA+AGG | + | chr8_2:46078112-46078131 | None:intergenic | 45.0% |
| ACTAGAAGGAAAGGGGGAAA+AGG | + | chr8_2:46078122-46078141 | None:intergenic | 45.0% | |
| GATCGAACTAGAAGGAAAGG+GGG | + | chr8_2:46078128-46078147 | None:intergenic | 45.0% | |
| GGATCGAACTAGAAGGAAAG+GGG | + | chr8_2:46078129-46078148 | None:intergenic | 45.0% | |
| GTGGATCGAACTAGAAGGAA+AGG | + | chr8_2:46078131-46078150 | None:intergenic | 45.0% | |
| ! | ACGTTGTCGAACTGGTTTCT+GGG | + | chr8_2:46078367-46078386 | None:intergenic | 45.0% |
| AAAGGAAGATCAGTCGATGG+TGG | - | chr8_2:46079009-46079028 | Msa1250430:intron | 45.0% | |
| TCAGTTTCACAACAGAGGTC+TGG | + | chr8_2:46079046-46079065 | None:intergenic | 45.0% | |
| !! | AACGTGGAAGCAAAAGTGTC+TGG | - | chr8_2:46079103-46079122 | Msa1250430:intron | 45.0% |
| CGACATTACCATCATTGCTG+AGG | - | chr8_2:46079255-46079274 | Msa1250430:CDS | 45.0% | |
| ! | ATGCTGACATGCGTAGGTTT+TGG | + | chr8_2:46079397-46079416 | None:intergenic | 45.0% |
| ACTTCAATGCTGACATGCGT+AGG | + | chr8_2:46079403-46079422 | None:intergenic | 45.0% | |
| !! | ATTAATTAATTAATAAATCT+TGG | - | chr8_2:46075357-46075376 | Msa1250430:intron | 5.0% |
| !! | GTTTAAATTTAAAAATTAAT+AGG | + | chr8_2:46077828-46077847 | None:intergenic | 5.0% |
| !! | TTTAAAAAAAATAAATCAAA+CGG | + | chr8_2:46077850-46077869 | None:intergenic | 5.0% |
| !! | AAATTAAAGTAATTTAATAT+AGG | + | chr8_2:46078859-46078878 | None:intergenic | 5.0% |
| GCTTTGCACTCCCCAAAGAA+CGG | + | chr8_2:46073904-46073923 | None:intergenic | 50.0% | |
| AACCGAGCCTCCAGTTTCAT+AGG | - | chr8_2:46074220-46074239 | Msa1250430:CDS | 50.0% | |
| ACCGAGCCTCCAGTTTCATA+GGG | - | chr8_2:46074221-46074240 | Msa1250430:CDS | 50.0% | |
| TCCCTATGAAACTGGAGGCT+CGG | + | chr8_2:46074225-46074244 | None:intergenic | 50.0% | |
| AGCCTCCAGTTTCATAGGGA+CGG | - | chr8_2:46074225-46074244 | Msa1250430:CDS | 50.0% | |
| TCTCGACATCACAGGATGTC+AGG | - | chr8_2:46075134-46075153 | Msa1250430:intron | 50.0% | |
| TGATCCACAGTCCCAACTCT+AGG | - | chr8_2:46075162-46075181 | Msa1250430:intron | 50.0% | |
| GATCCACAGTCCCAACTCTA+GGG | - | chr8_2:46075163-46075182 | Msa1250430:intron | 50.0% | |
| TCAGCGTCATTGCCAGAGTT+AGG | - | chr8_2:46076025-46076044 | Msa1250430:intron | 50.0% | |
| GCAGTGCGTATCCAATACAC+TGG | - | chr8_2:46076252-46076271 | Msa1250430:intron | 50.0% | |
| ! | TGGTGTTGAAGGTGTGCATC+TGG | + | chr8_2:46076908-46076927 | None:intergenic | 50.0% |
| TATCTAAGGGCGGAGTTAGG+TGG | + | chr8_2:46076928-46076947 | None:intergenic | 50.0% | |
| ! | AGGGGGCCAAAAGTGCAAAA+GGG | + | chr8_2:46077259-46077278 | None:intergenic | 50.0% |
| ! | TAGGGGGCCAAAAGTGCAAA+AGG | + | chr8_2:46077260-46077279 | None:intergenic | 50.0% |
| ! | TCGGTCAAAATTGGTCTGGG+TGG | - | chr8_2:46077456-46077475 | Msa1250430:intron | 50.0% |
| ! | CACGTTGTCGAACTGGTTTC+TGG | + | chr8_2:46078368-46078387 | None:intergenic | 50.0% |
| ! | CACGTTGAAGAGTGATTCGG+TGG | + | chr8_2:46079089-46079108 | None:intergenic | 50.0% |
| CACCGAATCACTCTTCAACG+TGG | - | chr8_2:46079087-46079106 | Msa1250430:intron | 50.0% | |
| GTCGACGATAGAATCCCCAA+GGG | + | chr8_2:46079239-46079258 | None:intergenic | 50.0% | |
| TGTCGACGATAGAATCCCCA+AGG | + | chr8_2:46079240-46079259 | None:intergenic | 50.0% | |
| AGTGCAAAGCTCAACCGAGC+TGG | - | chr8_2:46073914-46073933 | Msa1250430:CDS | 55.0% | |
| GTGCAAAGCTCAACCGAGCT+GGG | - | chr8_2:46073915-46073934 | Msa1250430:CDS | 55.0% | |
| ! | TCACTTTGAGAGGCCCAGCT+CGG | + | chr8_2:46073931-46073950 | None:intergenic | 55.0% |
| AGCTGGGCCTCTCAAAGTGA+CGG | - | chr8_2:46073931-46073950 | Msa1250430:CDS | 55.0% | |
| ! | TTGAGGCCCGTCACTTTGAG+AGG | + | chr8_2:46073941-46073960 | None:intergenic | 55.0% |
| GGTCTGTGTCTGTTCCACTG+AGG | + | chr8_2:46075816-46075835 | None:intergenic | 55.0% | |
| GCGCCCTTGATCCAGTGTAT+TGG | + | chr8_2:46076266-46076285 | None:intergenic | 55.0% | |
| ! | GCGGAGTTAGGTGGTGTTGA+AGG | + | chr8_2:46076919-46076938 | None:intergenic | 55.0% |
| GCTGGGCCTCTCAAAGTGAC+GGG | - | chr8_2:46073932-46073951 | Msa1250430:CDS | 60.0% | |
| GGCCGTCCCTATGAAACTGG+AGG | + | chr8_2:46074230-46074249 | None:intergenic | 60.0% | |
| CAGGGCCGTCCCTATGAAAC+TGG | + | chr8_2:46074233-46074252 | None:intergenic | 60.0% | |
| GCACCCTAGAGTTGGGACTG+TGG | + | chr8_2:46075169-46075188 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 46073740 | 46079439 | 46073740 | ID=Msa1250430;Name=Msa1250430 |
| chr8_2 | mRNA | 46073740 | 46079439 | 46073740 | ID=Msa1250430-mRNA-1;Parent=Msa1250430;Name=Msa1250430-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|0.6|1|1|5|0|337 |
| chr8_2 | exon | 46079392 | 46079439 | 46079392 | ID=Msa1250430-mRNA-1:exon:13862;Parent=Msa1250430-mRNA-1 |
| chr8_2 | exon | 46079233 | 46079280 | 46079233 | ID=Msa1250430-mRNA-1:exon:13861;Parent=Msa1250430-mRNA-1 |
| chr8_2 | exon | 46076966 | 46077439 | 46076966 | ID=Msa1250430-mRNA-1:exon:13860;Parent=Msa1250430-mRNA-1 |
| chr8_2 | exon | 46073903 | 46074262 | 46073903 | ID=Msa1250430-mRNA-1:exon:13859;Parent=Msa1250430-mRNA-1 |
| chr8_2 | exon | 46073740 | 46073823 | 46073740 | ID=Msa1250430-mRNA-1:exon:13858;Parent=Msa1250430-mRNA-1 |
| chr8_2 | CDS | 46079392 | 46079439 | 46079392 | ID=Msa1250430-mRNA-1:cds;Parent=Msa1250430-mRNA-1 |
| chr8_2 | CDS | 46079233 | 46079280 | 46079233 | ID=Msa1250430-mRNA-1:cds;Parent=Msa1250430-mRNA-1 |
| chr8_2 | CDS | 46076966 | 46077439 | 46076966 | ID=Msa1250430-mRNA-1:cds;Parent=Msa1250430-mRNA-1 |
| chr8_2 | CDS | 46073903 | 46074262 | 46073903 | ID=Msa1250430-mRNA-1:cds;Parent=Msa1250430-mRNA-1 |
| chr8_2 | CDS | 46073740 | 46073823 | 46073740 | ID=Msa1250430-mRNA-1:cds;Parent=Msa1250430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
