Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1252330 | XP_039685450.1 | 95.146 | 309 | 15 | 0 | 1 | 309 | 1 | 309 | 0.0 | 607 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1252330 | sp|Q9T072|BH025_ARATH | 38.830 | 188 | 112 | 2 | 111 | 296 | 135 | 321 | 2.30e-36 | 135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1252330 | A0A072TRP6 | 94.030 | 268 | 16 | 0 | 15 | 282 | 1 | 268 | 0.0 | 514 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1252330 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1252330 | MtrunA17_Chr2g0333541 | 79.592 | 294 | 42 | 2 | 15 | 308 | 1 | 276 | 8.32e-160 | 446 |
| Msa1252330 | MtrunA17_Chr8g0368371 | 91.489 | 141 | 12 | 0 | 15 | 155 | 1 | 141 | 7.22e-91 | 266 |
| Msa1252330 | MtrunA17_Chr2g0333621 | 38.438 | 320 | 165 | 10 | 3 | 300 | 2 | 311 | 3.16e-54 | 179 |
| Msa1252330 | MtrunA17_Chr4g0002801 | 37.389 | 337 | 167 | 11 | 1 | 300 | 1 | 330 | 2.81e-51 | 172 |
| Msa1252330 | MtrunA17_Chr2g0333641 | 37.618 | 319 | 164 | 12 | 1 | 298 | 1 | 305 | 2.88e-49 | 166 |
| Msa1252330 | MtrunA17_Chr8g0336681 | 41.296 | 247 | 127 | 6 | 71 | 300 | 90 | 335 | 3.52e-48 | 164 |
| Msa1252330 | MtrunA17_Chr5g0400621 | 46.392 | 194 | 97 | 4 | 111 | 303 | 144 | 331 | 1.12e-45 | 157 |
| Msa1252330 | MtrunA17_Chr4g0054581 | 42.784 | 194 | 107 | 2 | 109 | 300 | 183 | 374 | 7.47e-44 | 154 |
| Msa1252330 | MtrunA17_Chr4g0002781 | 33.803 | 355 | 174 | 11 | 1 | 300 | 1 | 349 | 2.41e-43 | 152 |
| Msa1252330 | MtrunA17_Chr2g0333611 | 43.204 | 206 | 95 | 6 | 100 | 297 | 21 | 212 | 2.92e-42 | 145 |
| Msa1252330 | MtrunA17_Chr5g0400661 | 43.781 | 201 | 95 | 5 | 115 | 300 | 137 | 334 | 1.21e-41 | 147 |
| Msa1252330 | MtrunA17_Chr2g0307131 | 40.415 | 193 | 110 | 3 | 109 | 300 | 163 | 351 | 3.04e-41 | 146 |
| Msa1252330 | MtrunA17_Chr4g0033291 | 38.846 | 260 | 134 | 11 | 54 | 302 | 80 | 325 | 2.03e-40 | 143 |
| Msa1252330 | MtrunA17_Chr2g0280161 | 44.022 | 184 | 94 | 4 | 117 | 296 | 168 | 346 | 5.68e-40 | 143 |
| Msa1252330 | MtrunA17_Chr2g0307141 | 42.045 | 176 | 98 | 2 | 126 | 300 | 183 | 355 | 1.11e-39 | 142 |
| Msa1252330 | MtrunA17_Chr4g0033391 | 40.000 | 195 | 107 | 5 | 109 | 302 | 132 | 317 | 6.02e-39 | 139 |
| Msa1252330 | MtrunA17_Chr4g0054561 | 35.000 | 260 | 137 | 8 | 61 | 298 | 74 | 323 | 1.39e-38 | 139 |
| Msa1252330 | MtrunA17_Chr4g0054551 | 38.725 | 204 | 104 | 5 | 107 | 298 | 129 | 323 | 6.53e-38 | 137 |
| Msa1252330 | MtrunA17_Chr4g0033281 | 33.436 | 326 | 170 | 14 | 1 | 296 | 9 | 317 | 2.72e-37 | 135 |
| Msa1252330 | MtrunA17_Chr7g0249811 | 33.524 | 349 | 162 | 12 | 1 | 300 | 1 | 328 | 5.61e-37 | 134 |
| Msa1252330 | MtrunA17_Chr5g0400671 | 33.333 | 249 | 137 | 7 | 72 | 302 | 88 | 325 | 1.37e-34 | 128 |
| Msa1252330 | MtrunA17_Chr4g0049331 | 38.191 | 199 | 115 | 3 | 105 | 298 | 110 | 305 | 2.46e-34 | 127 |
| Msa1252330 | MtrunA17_Chr6g0468491 | 38.776 | 196 | 107 | 4 | 110 | 300 | 122 | 309 | 7.99e-34 | 125 |
| Msa1252330 | MtrunA17_Chr7g0225901 | 37.640 | 178 | 107 | 2 | 104 | 280 | 66 | 240 | 9.58e-33 | 121 |
| Msa1252330 | MtrunA17_Chr4g0054621 | 33.953 | 215 | 126 | 5 | 92 | 300 | 133 | 337 | 4.03e-31 | 119 |
| Msa1252330 | MtrunA17_Chr5g0400641 | 39.623 | 159 | 92 | 2 | 129 | 286 | 1 | 156 | 4.33e-31 | 114 |
| Msa1252330 | MtrunA17_Chr4g0054571 | 38.049 | 205 | 112 | 7 | 107 | 302 | 132 | 330 | 1.08e-27 | 110 |
| Msa1252330 | MtrunA17_Chr7g0233441 | 37.725 | 167 | 85 | 5 | 131 | 296 | 44 | 192 | 5.02e-26 | 102 |
| Msa1252330 | MtrunA17_Chr4g0002831 | 37.288 | 177 | 94 | 6 | 128 | 302 | 45 | 206 | 3.56e-24 | 97.4 |
| Msa1252330 | MtrunA17_Chr4g0002851 | 36.310 | 168 | 84 | 4 | 130 | 296 | 47 | 192 | 1.30e-23 | 95.9 |
| Msa1252330 | MtrunA17_Chr6g0468461 | 36.257 | 171 | 90 | 4 | 111 | 280 | 159 | 311 | 1.16e-22 | 96.3 |
| Msa1252330 | MtrunA17_Chr8g0365711 | 25.896 | 251 | 148 | 10 | 78 | 302 | 179 | 417 | 1.81e-12 | 67.4 |
| Msa1252330 | MtrunA17_Chr2g0298751 | 26.702 | 191 | 122 | 6 | 97 | 272 | 21 | 208 | 8.59e-12 | 63.9 |
| Msa1252330 | MtrunA17_Chr8g0346161 | 23.718 | 156 | 109 | 5 | 116 | 264 | 280 | 432 | 6.04e-11 | 62.8 |
| Msa1252330 | MtrunA17_Chr3g0131691 | 28.846 | 156 | 103 | 5 | 127 | 274 | 299 | 454 | 9.80e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1252330 | AT4G37850.2 | 38.830 | 188 | 112 | 2 | 111 | 296 | 135 | 321 | 2.34e-37 | 135 |
| Msa1252330 | AT4G37850.1 | 38.830 | 188 | 112 | 2 | 111 | 296 | 135 | 321 | 2.34e-37 | 135 |
| Msa1252330 | AT2G22750.2 | 43.575 | 179 | 99 | 1 | 119 | 295 | 119 | 297 | 8.77e-37 | 134 |
| Msa1252330 | AT2G22750.3 | 43.575 | 179 | 99 | 1 | 119 | 295 | 147 | 325 | 1.29e-36 | 134 |
| Msa1252330 | AT2G22750.5 | 43.575 | 179 | 99 | 1 | 119 | 295 | 143 | 321 | 1.53e-36 | 134 |
| Msa1252330 | AT2G22750.1 | 43.575 | 179 | 98 | 2 | 119 | 295 | 119 | 296 | 2.92e-35 | 129 |
| Msa1252330 | AT2G22750.4 | 43.575 | 179 | 98 | 2 | 119 | 295 | 147 | 324 | 4.06e-35 | 130 |
| Msa1252330 | AT2G22760.1 | 36.139 | 202 | 109 | 8 | 108 | 301 | 106 | 295 | 1.82e-31 | 119 |
| Msa1252330 | AT2G22770.1 | 36.413 | 184 | 104 | 3 | 126 | 296 | 132 | 315 | 1.53e-30 | 117 |
| Msa1252330 | AT2G22760.2 | 35.556 | 180 | 98 | 6 | 108 | 280 | 106 | 274 | 1.60e-26 | 106 |
| Msa1252330 | AT4G29930.5 | 25.500 | 200 | 128 | 5 | 87 | 280 | 13 | 197 | 5.29e-14 | 70.5 |
| Msa1252330 | AT4G29930.2 | 25.628 | 199 | 127 | 5 | 87 | 279 | 13 | 196 | 5.51e-14 | 70.5 |
| Msa1252330 | AT5G57150.5 | 26.667 | 195 | 132 | 6 | 87 | 272 | 14 | 206 | 5.86e-14 | 70.5 |
| Msa1252330 | AT4G29930.6 | 25.000 | 196 | 135 | 4 | 87 | 279 | 13 | 199 | 6.18e-14 | 70.5 |
| Msa1252330 | AT5G57150.1 | 26.667 | 195 | 132 | 6 | 87 | 272 | 14 | 206 | 1.09e-13 | 70.1 |
| Msa1252330 | AT4G09820.1 | 32.680 | 153 | 76 | 4 | 114 | 265 | 351 | 477 | 3.10e-13 | 70.5 |
| Msa1252330 | AT5G41315.3 | 30.488 | 164 | 88 | 5 | 118 | 258 | 438 | 598 | 4.76e-13 | 70.1 |
| Msa1252330 | AT5G41315.1 | 30.488 | 164 | 88 | 5 | 118 | 258 | 433 | 593 | 4.79e-13 | 70.1 |
| Msa1252330 | AT5G41315.2 | 30.488 | 164 | 88 | 5 | 118 | 258 | 441 | 601 | 5.00e-13 | 70.1 |
| Msa1252330 | AT5G57150.3 | 26.486 | 185 | 125 | 6 | 97 | 272 | 25 | 207 | 6.03e-13 | 67.4 |
| Msa1252330 | AT5G57150.2 | 26.486 | 185 | 125 | 6 | 97 | 272 | 25 | 207 | 7.43e-13 | 67.4 |
| Msa1252330 | AT4G29930.1 | 24.074 | 216 | 138 | 5 | 87 | 279 | 13 | 225 | 1.03e-12 | 67.4 |
| Msa1252330 | AT4G29930.3 | 23.963 | 217 | 139 | 5 | 87 | 280 | 13 | 226 | 1.20e-12 | 67.4 |
| Msa1252330 | AT4G29930.7 | 23.963 | 217 | 139 | 5 | 87 | 280 | 13 | 226 | 1.20e-12 | 67.4 |
| Msa1252330 | AT5G57150.4 | 26.486 | 185 | 125 | 6 | 97 | 272 | 25 | 207 | 1.33e-12 | 67.0 |
| Msa1252330 | AT4G17880.1 | 22.535 | 213 | 143 | 5 | 88 | 284 | 365 | 571 | 3.27e-12 | 67.4 |
| Msa1252330 | AT1G63650.3 | 28.846 | 156 | 96 | 3 | 118 | 258 | 397 | 552 | 3.50e-12 | 67.4 |
| Msa1252330 | AT1G63650.1 | 28.846 | 156 | 96 | 3 | 118 | 258 | 397 | 552 | 3.50e-12 | 67.4 |
| Msa1252330 | AT1G63650.2 | 28.846 | 156 | 96 | 3 | 118 | 258 | 397 | 552 | 3.50e-12 | 67.4 |
Find 67 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCTTTGTCAATTAGGATA+TGG | 0.244498 | 8_2:+49195457 | None:intergenic |
| TTGCAGTGTCTTTGTCAATT+AGG | 0.254728 | 8_2:+49195451 | None:intergenic |
| CTTCTTTAATCCAGGTAAAA+AGG | 0.260920 | 8_2:+49198942 | None:intergenic |
| CAAGACATTGGTAGTTGTTA+TGG | 0.303801 | 8_2:+49195269 | None:intergenic |
| GAGGTTGAAGCTAGGGTTCT+AGG | 0.308353 | 8_2:-49195378 | Msa1252330:CDS |
| ACTACCAATGTCTTGCCATT+TGG | 0.326554 | 8_2:-49195261 | Msa1252330:CDS |
| GGGGAATTGGTCTTACGATT+TGG | 0.345192 | 8_2:-49199522 | Msa1252330:intron |
| AAGGAAGATCATAGAACTTT+CGG | 0.368150 | 8_2:-49198965 | Msa1252330:CDS |
| ACTAGGCCAGTTGTGGCAAT+AGG | 0.371153 | 8_2:+49199246 | None:intergenic |
| ATTACTTGCCTGAGCAATAA+TGG | 0.378451 | 8_2:+49195221 | None:intergenic |
| ACATAATGTCAGAGAGGAAT+AGG | 0.386492 | 8_2:-49199002 | Msa1252330:CDS |
| AATGGCTTTGTAGATTGATA+AGG | 0.402893 | 8_2:-49195595 | Msa1252330:intron |
| AGTGTCTCAGAAGCGCTTCT+AGG | 0.408035 | 8_2:+49199030 | None:intergenic |
| TAGGATATGGGATCTTGTTA+TGG | 0.409337 | 8_2:+49195470 | None:intergenic |
| GTCTTTGTCAATTAGGATAT+GGG | 0.412094 | 8_2:+49195458 | None:intergenic |
| AGAGACAATATAGAATTTGT+TGG | 0.427912 | 8_2:+49199150 | None:intergenic |
| TCTGATACAGGATATCTCTA+AGG | 0.449935 | 8_2:+49199292 | None:intergenic |
| TGAAAACTGAAGAATGTTAC+GGG | 0.453225 | 8_2:-49195419 | Msa1252330:CDS |
| ATGAAAACTGAAGAATGTTA+CGG | 0.462740 | 8_2:-49195420 | Msa1252330:CDS |
| CTAGGCCAGTTGTGGCAATA+GGG | 0.464667 | 8_2:+49199247 | None:intergenic |
| TGACATCGCCATTATTGCTC+AGG | 0.465995 | 8_2:-49195229 | Msa1252330:intron |
| GATCTTGTGGTGTCTGATAC+AGG | 0.476165 | 8_2:+49199280 | None:intergenic |
| AATATAGAATTTGTTGGTAT+CGG | 0.477242 | 8_2:+49199156 | None:intergenic |
| ATCTTCATCAAATGTGTTGT+TGG | 0.478390 | 8_2:+49199317 | None:intergenic |
| AGTGTCCCTATTGCCACAAC+TGG | 0.491296 | 8_2:-49199252 | Msa1252330:CDS |
| AGTTGAATGTGACACCTTGA+TGG | 0.493789 | 8_2:+49199212 | None:intergenic |
| AGACTCACCTTCTTTAATCC+AGG | 0.495262 | 8_2:+49198934 | None:intergenic |
| CACTTGTAGAGGTTGAAGCT+AGG | 0.509415 | 8_2:-49195386 | Msa1252330:CDS |
| AGAGATGAAGAAGTTGAAGC+TGG | 0.509669 | 8_2:+49195292 | None:intergenic |
| AACTTGAAGAACGTGTGAAA+GGG | 0.515188 | 8_2:-49195536 | Msa1252330:CDS |
| GCTTCTTCGAATTTGACCCT+TGG | 0.520716 | 8_2:+49199052 | None:intergenic |
| CAACTTGAAGAACGTGTGAA+AGG | 0.521724 | 8_2:-49195537 | Msa1252330:CDS |
| ACTTGTAGAGGTTGAAGCTA+GGG | 0.522502 | 8_2:-49195385 | Msa1252330:CDS |
| AGGTTGAAGCTAGGGTTCTA+GGG | 0.524896 | 8_2:-49195377 | Msa1252330:CDS |
| TTTGCCTTTGTCGTCATCAA+CGG | 0.534333 | 8_2:-49199079 | Msa1252330:CDS |
| ACGACAAAGGCAAAGAATCA+TGG | 0.539001 | 8_2:+49199088 | None:intergenic |
| TTCATTGTGGCATGCAAGAG+GGG | 0.542951 | 8_2:-49195335 | Msa1252330:CDS |
| GAATCATGGTGTTGCTCAGT+TGG | 0.544880 | 8_2:+49199102 | None:intergenic |
| ATTGACAAAGACACTGCAAT+CGG | 0.560557 | 8_2:-49195447 | Msa1252330:CDS |
| TGTTGGTATCGGTAATGAGT+TGG | 0.561174 | 8_2:+49199167 | None:intergenic |
| TCGTCATCAACGGCTAGCCA+AGG | 0.562738 | 8_2:-49199069 | Msa1252330:CDS |
| GGTATCGGTAATGAGTTGGC+TGG | 0.564211 | 8_2:+49199171 | None:intergenic |
| AAGAAATGGAGGAGAATCCA+TGG | 0.566331 | 8_2:-49199544 | None:intergenic |
| ATGTCAAGAGTATTTCCAAA+TGG | 0.567932 | 8_2:+49195246 | None:intergenic |
| ATTCATTGTGGCATGCAAGA+GGG | 0.569505 | 8_2:-49195336 | Msa1252330:CDS |
| ATTTCCAAATGGCAAGACAT+TGG | 0.570505 | 8_2:+49195257 | None:intergenic |
| TGATAAGGTTCATGTGGTAA+CGG | 0.571985 | 8_2:-49195580 | Msa1252330:CDS |
| GTAGATTGATAAGGTTCATG+TGG | 0.584148 | 8_2:-49195586 | Msa1252330:intron |
| ATAGGAGACAGCTACTTACA+AGG | 0.587866 | 8_2:-49198984 | Msa1252330:CDS |
| AGAAATGGAGGAGAATCCAT+GGG | 0.587899 | 8_2:-49199543 | None:intergenic |
| GAGATGAAGAAGTTGAAGCT+GGG | 0.593619 | 8_2:+49195293 | None:intergenic |
| GATTCATTGTGGCATGCAAG+AGG | 0.605687 | 8_2:-49195337 | Msa1252330:CDS |
| AGTCAACAACTCATCCATCA+AGG | 0.612611 | 8_2:-49199226 | Msa1252330:CDS |
| CAAATACAACTTGACAGTGA+AGG | 0.613166 | 8_2:-49194769 | Msa1252330:CDS |
| GCGAAATGAATCACTTGTAG+AGG | 0.614559 | 8_2:-49195397 | Msa1252330:CDS |
| CGTCATCAACGGCTAGCCAA+GGG | 0.623288 | 8_2:-49199068 | Msa1252330:CDS |
| TGATGGATGAGTTGTTGACT+AGG | 0.626332 | 8_2:+49199229 | None:intergenic |
| GACATCAAGAAGAAAGACAC+AGG | 0.627807 | 8_2:-49195504 | Msa1252330:CDS |
| GTGTTAATCAAGATTCATTG+TGG | 0.641857 | 8_2:-49195348 | Msa1252330:CDS |
| TCATGGTGTTGCTCAGTTGG+TGG | 0.641914 | 8_2:+49199105 | None:intergenic |
| TGGCATGCAAGAGGGGATTG+TGG | 0.656870 | 8_2:-49195328 | Msa1252330:CDS |
| CTAGCCGTTGATGACGACAA+AGG | 0.683159 | 8_2:+49199075 | None:intergenic |
| GGGACACTGAATTGATCTTG+TGG | 0.685755 | 8_2:+49199267 | None:intergenic |
| GTTGTTGACTAGGCCAGTTG+TGG | 0.701059 | 8_2:+49199239 | None:intergenic |
| TAGATCACATAATGTCAGAG+AGG | 0.710986 | 8_2:-49199008 | Msa1252330:CDS |
| GAAATGGAGGAGAATCCATG+GGG | 0.745989 | 8_2:-49199542 | Msa1252330:CDS |
| AAATGGAGGAGAATCCATGG+GGG | 0.828261 | 8_2:-49199541 | Msa1252330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAAAAAATTAAATAT+AGG | - | chr8_2:49197350-49197369 | Msa1252330:intron | 0.0% |
| !! | TAAAAAAAAAATTAAATATA+GGG | - | chr8_2:49197351-49197370 | Msa1252330:intron | 0.0% |
| !!! | TTTTAAATTTTTTTTTTTTT+TGG | + | chr8_2:49197405-49197424 | None:intergenic | 0.0% |
| !!! | TTTTTTAAAAAAATTAATTA+TGG | + | chr8_2:49197810-49197829 | None:intergenic | 0.0% |
| !!! | CAAAGAAAAATTAAATTTTT+GGG | + | chr8_2:49195468-49195487 | None:intergenic | 10.0% |
| !!! | ACAAAGAAAAATTAAATTTT+TGG | + | chr8_2:49195469-49195488 | None:intergenic | 10.0% |
| !! | TCAAAGTAAAAATAAATAAA+GGG | + | chr8_2:49195539-49195558 | None:intergenic | 10.0% |
| !! | ATCAAAGTAAAAATAAATAA+AGG | + | chr8_2:49195540-49195559 | None:intergenic | 10.0% |
| !! | GTGATAAAAAAAAAAAAAAA+AGG | - | chr8_2:49197236-49197255 | Msa1252330:intron | 10.0% |
| !! | AAAAAATTAGTTATGAATAA+TGG | + | chr8_2:49197619-49197638 | None:intergenic | 10.0% |
| !! | AAAAAATTAATTATGGATAA+TGG | + | chr8_2:49197803-49197822 | None:intergenic | 10.0% |
| !! | TTAGCAAAAATATAATTAAA+AGG | - | chr8_2:49199084-49199103 | Msa1252330:CDS | 10.0% |
| !! | AAATTATATATATATTTGCT+AGG | + | chr8_2:49199312-49199331 | None:intergenic | 10.0% |
| !! | CAAATATATATATAATTTCA+TGG | - | chr8_2:49199314-49199333 | Msa1252330:CDS | 10.0% |
| !! | TAAAACAATAATTAATCAAG+TGG | + | chr8_2:49194866-49194885 | None:intergenic | 15.0% |
| !! | GTAATATATTAAATTAAACC+AGG | - | chr8_2:49195335-49195354 | Msa1252330:CDS | 15.0% |
| !! | TTAGATTGTTAATATTGTTT+AGG | - | chr8_2:49195833-49195852 | Msa1252330:intron | 15.0% |
| !! | TAGATTGTTAATATTGTTTA+GGG | - | chr8_2:49195834-49195853 | Msa1252330:intron | 15.0% |
| !!! | TATATTTTTTTATCAAGCAA+AGG | + | chr8_2:49195942-49195961 | None:intergenic | 15.0% |
| !!! | TTTTTTTATTTGCAAAATAC+AGG | - | chr8_2:49197187-49197206 | Msa1252330:intron | 15.0% |
| !!! | TTTTTTATTTGCAAAATACA+GGG | - | chr8_2:49197188-49197207 | Msa1252330:intron | 15.0% |
| !!! | TCTTAATTTTATGTGTATAA+TGG | + | chr8_2:49197460-49197479 | None:intergenic | 15.0% |
| !! | AAATAAATAAATTAGTTCCA+TGG | - | chr8_2:49197561-49197580 | Msa1252330:intron | 15.0% |
| !! | AAAAAATGAATTACAGTTAA+TGG | + | chr8_2:49198070-49198089 | None:intergenic | 15.0% |
| !! | AAAAAATGAATTACAGTTAA+TGG | + | chr8_2:49198070-49198089 | None:intergenic | 15.0% |
| !! | CTACAATAAAAATTATCTAA+TGG | - | chr8_2:49198633-49198652 | Msa1252330:intron | 15.0% |
| !! | AGGGTTATAATAATTAAATT+TGG | + | chr8_2:49199384-49199403 | None:intergenic | 15.0% |
| !! | TATAATATATGTTACAGATA+GGG | + | chr8_2:49199403-49199422 | None:intergenic | 15.0% |
| !! | TTATAATATATGTTACAGAT+AGG | + | chr8_2:49199404-49199423 | None:intergenic | 15.0% |
| !!! | TTTACAAATGAATCGTTTTT+AGG | - | chr8_2:49194882-49194901 | Msa1252330:intron | 20.0% |
| !!! | AATATAGAATTTGTTGGTAT+CGG | + | chr8_2:49195093-49195112 | None:intergenic | 20.0% |
| !! | TTTCCAAAATTTGATCATAT+CGG | + | chr8_2:49196188-49196207 | None:intergenic | 20.0% |
| !! | GGTAAACTAAATTAACAAAT+TGG | - | chr8_2:49197257-49197276 | Msa1252330:intron | 20.0% |
| !!! | ATACAATTATGAAATTTTGC+TGG | - | chr8_2:49197978-49197997 | Msa1252330:intron | 20.0% |
| !!! | ATACAATTATGAAATTTTGC+TGG | - | chr8_2:49197978-49197997 | Msa1252330:intron | 20.0% |
| !!! | ATACAATTATGAAATTTTGC+TGG | - | chr8_2:49197978-49197997 | Msa1252330:intron | 20.0% |
| !! | ACTGATAAATATATATGTAG+CGG | - | chr8_2:49198531-49198550 | Msa1252330:intron | 20.0% |
| !! | TCCTATGTTTATTATATTAG+TGG | - | chr8_2:49198562-49198581 | Msa1252330:intron | 20.0% |
| !! | ACCACTAATATAATAAACAT+AGG | + | chr8_2:49198566-49198585 | None:intergenic | 20.0% |
| !! | GCAAAAATATAATTAAAAGG+TGG | - | chr8_2:49199087-49199106 | Msa1252330:CDS | 20.0% |
| !!! | TTTTTCAAAATGAGTGTTTT+AGG | + | chr8_2:49199139-49199158 | None:intergenic | 20.0% |
| !! | TACATATTCATAAAAACTAG+TGG | - | chr8_2:49199280-49199299 | Msa1252330:CDS | 20.0% |
| !! | ACATATTCATAAAAACTAGT+GGG | - | chr8_2:49199281-49199300 | Msa1252330:CDS | 20.0% |
| ! | ACAATAATTAATCAAGTGGT+AGG | + | chr8_2:49194862-49194881 | None:intergenic | 25.0% |
| !!! | AATGAATCGTTTTTAGGAAA+TGG | - | chr8_2:49194888-49194907 | Msa1252330:intron | 25.0% |
| ! | AGAGACAATATAGAATTTGT+TGG | + | chr8_2:49195099-49195118 | None:intergenic | 25.0% |
| !!! | AAATTAAATTTTTGGGACAC+CGG | + | chr8_2:49195461-49195480 | None:intergenic | 25.0% |
| !!! | TAATCTTTTTTGCTAGTTGA+TGG | - | chr8_2:49195649-49195668 | Msa1252330:intron | 25.0% |
| !!! | ATTCTATCCAATCTTGTTTT+TGG | - | chr8_2:49195686-49195705 | Msa1252330:intron | 25.0% |
| ! | AAAATATGCATCAACAAAAG+CGG | + | chr8_2:49196302-49196321 | None:intergenic | 25.0% |
| !! | AAGTGTTGTGCAATATTTAA+TGG | + | chr8_2:49196472-49196491 | None:intergenic | 25.0% |
| !! | TCATATTGACTATCTTATAG+CGG | + | chr8_2:49196591-49196610 | None:intergenic | 25.0% |
| ! | TATGTATATCGATATGAGAA+AGG | - | chr8_2:49196764-49196783 | Msa1252330:intron | 25.0% |
| ! | CACAAGAAATTAGTGATAAA+GGG | - | chr8_2:49197047-49197066 | Msa1252330:intron | 25.0% |
| ! | CAAAATTTCATAGTTATCCT+TGG | + | chr8_2:49197084-49197103 | None:intergenic | 25.0% |
| !! | GGATAACTATGAAATTTTGT+TGG | - | chr8_2:49197085-49197104 | Msa1252330:intron | 25.0% |
| ! | TAGTAGTAGTAGTAGATAAA+AGG | - | chr8_2:49197123-49197142 | Msa1252330:intron | 25.0% |
| ! | AGTAGTAGTAGTAGATAAAA+GGG | - | chr8_2:49197124-49197143 | Msa1252330:intron | 25.0% |
| ! | GATAAGAAAGAAAAAGAATG+AGG | - | chr8_2:49197152-49197171 | Msa1252330:intron | 25.0% |
| !! | AAATACAGGGAATCAATTTT+AGG | - | chr8_2:49197201-49197220 | Msa1252330:intron | 25.0% |
| !! | TAACAAATTGGCTCATTATA+TGG | - | chr8_2:49197269-49197288 | Msa1252330:intron | 25.0% |
| ! | CACATAAAATTAAGAGATCA+TGG | - | chr8_2:49197465-49197484 | Msa1252330:intron | 25.0% |
| !! | CCTTAATTTTATGTGCATAA+CGG | + | chr8_2:49197679-49197698 | None:intergenic | 25.0% |
| !!! | AAGGAGATCATGTTTTAAAA+AGG | - | chr8_2:49197695-49197714 | Msa1252330:intron | 25.0% |
| ! | CATAAAATTAAGGAGATCAT+GGG | - | chr8_2:49197686-49197705 | Msa1252330:intron | 25.0% |
| ! | CATAAAATTAAGGAGATCAT+GGG | - | chr8_2:49197686-49197705 | Msa1252330:intron | 25.0% |
| ! | CATAAAATTAAGGAGAACAT+GGG | - | chr8_2:49198426-49198445 | Msa1252330:intron | 25.0% |
| ! | TTCTATCCAATGATAATCTA+TGG | + | chr8_2:49198612-49198631 | None:intergenic | 25.0% |
| ! | ATGAAAACTGAAGAATGTTA+CGG | - | chr8_2:49198826-49198845 | Msa1252330:intron | 25.0% |
| !!! | ACTCATTTTGAAAAACAAGT+GGG | - | chr8_2:49199144-49199163 | Msa1252330:CDS | 25.0% |
| !! | ACACCTAGTTATCTTTTAAA+AGG | - | chr8_2:49199203-49199222 | Msa1252330:CDS | 25.0% |
| !!! | ACTCCTTTTAAAAGATAACT+AGG | + | chr8_2:49199209-49199228 | None:intergenic | 25.0% |
| !! | TTTTAGCAACATACATCTTA+GGG | + | chr8_2:49199260-49199279 | None:intergenic | 25.0% |
| !!! | ATTTTAGCAACATACATCTT+AGG | + | chr8_2:49199261-49199280 | None:intergenic | 25.0% |
| ATCTTCATCAAATGTGTTGT+TGG | + | chr8_2:49194932-49194951 | None:intergenic | 30.0% | |
| AAGGAAGATCATAGAACTTT+CGG | - | chr8_2:49195281-49195300 | Msa1252330:CDS | 30.0% | |
| CTTCTTTAATCCAGGTAAAA+AGG | + | chr8_2:49195307-49195326 | None:intergenic | 30.0% | |
| ! | CTTTTTACCTGGATTAAAGA+AGG | - | chr8_2:49195305-49195324 | Msa1252330:CDS | 30.0% |
| AGAAATTTACACATTTGTCC+TGG | + | chr8_2:49195356-49195375 | None:intergenic | 30.0% | |
| ATACTTGTTCGAATTTGTGT+CGG | + | chr8_2:49195516-49195535 | None:intergenic | 30.0% | |
| ATCTACAAGATTAAGATGTG+TGG | - | chr8_2:49195580-49195599 | Msa1252330:CDS | 30.0% | |
| !! | TGCTAGTTGATGGATAAAAA+AGG | - | chr8_2:49195659-49195678 | Msa1252330:intron | 30.0% |
| ACAAAGTCCAAAAACAAGAT+TGG | + | chr8_2:49195696-49195715 | None:intergenic | 30.0% | |
| ATATTGTTTAGGGACAATAG+TGG | - | chr8_2:49195844-49195863 | Msa1252330:intron | 30.0% | |
| GATGTAATAACTTCTGCATT+AGG | - | chr8_2:49195888-49195907 | Msa1252330:intron | 30.0% | |
| GAAAGCAATAAAAACAGAAG+GGG | + | chr8_2:49195920-49195939 | None:intergenic | 30.0% | |
| GGAAAGCAATAAAAACAGAA+GGG | + | chr8_2:49195921-49195940 | None:intergenic | 30.0% | |
| AGGAAAGCAATAAAAACAGA+AGG | + | chr8_2:49195922-49195941 | None:intergenic | 30.0% | |
| ! | AAGCCGATATGATCAAATTT+TGG | - | chr8_2:49196182-49196201 | Msa1252330:intron | 30.0% |
| AGTGCAGTGAAAATACTTAA+CGG | + | chr8_2:49196703-49196722 | None:intergenic | 30.0% | |
| GCACAAGAAATTAGTGATAA+AGG | - | chr8_2:49197046-49197065 | Msa1252330:intron | 30.0% | |
| ! | AAAGGGAATTAGTTTAACCA+AGG | - | chr8_2:49197064-49197083 | Msa1252330:intron | 30.0% |
| ! | CTAGACTTTTTGTGTGAAAT+TGG | - | chr8_2:49197298-49197317 | Msa1252330:intron | 30.0% |
| ACAAGTGTAACCAATTTCTA+CGG | + | chr8_2:49197591-49197610 | None:intergenic | 30.0% | |
| CCGTTATGCACATAAAATTA+AGG | - | chr8_2:49197676-49197695 | Msa1252330:intron | 30.0% | |
| ! | GGACGATTATCAAATTTTGT+TGG | - | chr8_2:49197716-49197735 | Msa1252330:intron | 30.0% |
| ATTAGTTCCATAATTACTCG+TGG | - | chr8_2:49197837-49197856 | Msa1252330:intron | 30.0% | |
| ! | CCTTAATTTTATGCGCATAA+CGG | + | chr8_2:49197939-49197958 | None:intergenic | 30.0% |
| ! | CCTTAATTTTATGCGCATAA+TGG | + | chr8_2:49197939-49197958 | None:intergenic | 30.0% |
| CCATTATGCGCATAAAATTA+AGG | - | chr8_2:49198122-49198141 | Msa1252330:intron | 30.0% | |
| GCATAAAATTAAGGAGATCA+TGG | - | chr8_2:49197945-49197964 | Msa1252330:intron | 30.0% | |
| ! | CCTTAATTTTATGCGCATAA+TGG | + | chr8_2:49197939-49197958 | None:intergenic | 30.0% |
| CCATTATGCGCATAAAATTA+AGG | - | chr8_2:49198122-49198141 | Msa1252330:intron | 30.0% | |
| GCATAAAATTAAGGAGATCA+TGG | - | chr8_2:49197945-49197964 | Msa1252330:intron | 30.0% | |
| CTGTTATGCGCATAAAATTA+AGG | - | chr8_2:49198416-49198435 | Msa1252330:intron | 30.0% | |
| GCATAAAATTAAGGAGAACA+TGG | - | chr8_2:49198425-49198444 | Msa1252330:intron | 30.0% | |
| AAATATATATGTAGCGGTGT+CGG | - | chr8_2:49198537-49198556 | Msa1252330:intron | 30.0% | |
| !! | AATGGCTTTGTAGATTGATA+AGG | - | chr8_2:49198651-49198670 | Msa1252330:intron | 30.0% |
| GTCTTTGTCAATTAGGATAT+GGG | + | chr8_2:49198791-49198810 | None:intergenic | 30.0% | |
| TGTCTTTGTCAATTAGGATA+TGG | + | chr8_2:49198792-49198811 | None:intergenic | 30.0% | |
| TGAAAACTGAAGAATGTTAC+GGG | - | chr8_2:49198827-49198846 | Msa1252330:intron | 30.0% | |
| GTGTTAATCAAGATTCATTG+TGG | - | chr8_2:49198898-49198917 | Msa1252330:intron | 30.0% | |
| !! | ATGTCAAGAGTATTTCCAAA+TGG | + | chr8_2:49199003-49199022 | None:intergenic | 30.0% |
| TAAAAAACAAGTGTGTGTAC+TGG | + | chr8_2:49199053-49199072 | None:intergenic | 30.0% | |
| !! | CACTCATTTTGAAAAACAAG+TGG | - | chr8_2:49199143-49199162 | Msa1252330:CDS | 30.0% |
| GATAAGAATCAAACTTGAGT+TGG | + | chr8_2:49199362-49199381 | None:intergenic | 30.0% | |
| TTTGTAATTGATCCTACAGA+TGG | - | chr8_2:49199450-49199469 | Msa1252330:intron | 30.0% | |
| TTGTAATTGATCCTACAGAT+GGG | - | chr8_2:49199451-49199470 | Msa1252330:intron | 30.0% | |
| AGTGAAAAAACTAAGAGAAG+TGG | - | chr8_2:49199504-49199523 | Msa1252330:intron | 30.0% | |
| !! | GTAGGTTTTATAGTTAGTGG+AGG | + | chr8_2:49194844-49194863 | None:intergenic | 35.0% |
| !! | GTGGTAGGTTTTATAGTTAG+TGG | + | chr8_2:49194847-49194866 | None:intergenic | 35.0% |
| TCTGATACAGGATATCTCTA+AGG | + | chr8_2:49194957-49194976 | None:intergenic | 35.0% | |
| TAGATCACATAATGTCAGAG+AGG | - | chr8_2:49195238-49195257 | Msa1252330:CDS | 35.0% | |
| ACATAATGTCAGAGAGGAAT+AGG | - | chr8_2:49195244-49195263 | Msa1252330:CDS | 35.0% | |
| TAGTTATCATCTACGAAGCA+CGG | - | chr8_2:49195380-49195399 | Msa1252330:CDS | 35.0% | |
| TGTGGAAGCAATATTGATCA+AGG | - | chr8_2:49195598-49195617 | Msa1252330:intron | 35.0% | |
| GAAGCAATATTGATCAAGGA+GGG | - | chr8_2:49195602-49195621 | Msa1252330:intron | 35.0% | |
| ATAACTTCTGCATTAGGTTC+AGG | - | chr8_2:49195894-49195913 | Msa1252330:intron | 35.0% | |
| TAGTTGAATCGTGTTTGATG+TGG | - | chr8_2:49196012-49196031 | Msa1252330:intron | 35.0% | |
| ! | ATATTGCACAACACTTGTTG+AGG | - | chr8_2:49196476-49196495 | Msa1252330:intron | 35.0% |
| ATAGGGGAATTAGTTAAGCT+TGG | - | chr8_2:49197368-49197387 | Msa1252330:intron | 35.0% | |
| CCAAATTCCACGAGTAATTA+TGG | + | chr8_2:49197847-49197866 | None:intergenic | 35.0% | |
| CCATAATTACTCGTGGAATT+TGG | - | chr8_2:49197844-49197863 | Msa1252330:intron | 35.0% | |
| CCGTTATGCGCATAAAATTA+AGG | - | chr8_2:49197936-49197955 | Msa1252330:intron | 35.0% | |
| CCAAATTCTACGGATAGTTA+TGG | + | chr8_2:49198033-49198052 | None:intergenic | 35.0% | |
| CCATAACTATCCGTAGAATT+TGG | - | chr8_2:49198030-49198049 | Msa1252330:intron | 35.0% | |
| CACAGTGTAACCAAATTCTA+CGG | + | chr8_2:49198043-49198062 | None:intergenic | 35.0% | |
| AGTAAACTACCCGTAGAATT+TGG | - | chr8_2:49198209-49198228 | Msa1252330:intron | 35.0% | |
| ACAGTGTAACCAAATTCTAC+GGG | + | chr8_2:49198042-49198061 | None:intergenic | 35.0% | |
| CACAGTGTAACCAAATTCTA+CGG | + | chr8_2:49198043-49198062 | None:intergenic | 35.0% | |
| !!! | GGAGAACATGGGTTTTAAAA+AGG | - | chr8_2:49198437-49198456 | Msa1252330:intron | 35.0% |
| ! | GGACGATTATGAAATTTTGC+TGG | - | chr8_2:49198458-49198477 | Msa1252330:intron | 35.0% |
| CAATGATAATCTATGGAGCA+TGG | + | chr8_2:49198605-49198624 | None:intergenic | 35.0% | |
| CATGCTCCATAGATTATCAT+TGG | - | chr8_2:49198603-49198622 | Msa1252330:intron | 35.0% | |
| GTAGATTGATAAGGTTCATG+TGG | - | chr8_2:49198660-49198679 | Msa1252330:intron | 35.0% | |
| TGATAAGGTTCATGTGGTAA+CGG | - | chr8_2:49198666-49198685 | Msa1252330:intron | 35.0% | |
| AACTTGAAGAACGTGTGAAA+GGG | - | chr8_2:49198710-49198729 | Msa1252330:intron | 35.0% | |
| TAGGATATGGGATCTTGTTA+TGG | + | chr8_2:49198779-49198798 | None:intergenic | 35.0% | |
| TTGCAGTGTCTTTGTCAATT+AGG | + | chr8_2:49198798-49198817 | None:intergenic | 35.0% | |
| ATTGACAAAGACACTGCAAT+CGG | - | chr8_2:49198799-49198818 | Msa1252330:intron | 35.0% | |
| ! | CAAGACATTGGTAGTTGTTA+TGG | + | chr8_2:49198980-49198999 | None:intergenic | 35.0% |
| ATTTCCAAATGGCAAGACAT+TGG | + | chr8_2:49198992-49199011 | None:intergenic | 35.0% | |
| ATTACTTGCCTGAGCAATAA+TGG | + | chr8_2:49199028-49199047 | None:intergenic | 35.0% | |
| ! | TGTATTTGTTACCCATCTGT+AGG | + | chr8_2:49199465-49199484 | None:intergenic | 35.0% |
| CAAATACAACTTGACAGTGA+AGG | - | chr8_2:49199477-49199496 | Msa1252330:intron | 35.0% | |
| ! | TGATGGATGAGTTGTTGACT+AGG | + | chr8_2:49195020-49195039 | None:intergenic | 40.0% |
| AGTCAACAACTCATCCATCA+AGG | - | chr8_2:49195020-49195039 | Msa1252330:intron | 40.0% | |
| AGTTGAATGTGACACCTTGA+TGG | + | chr8_2:49195037-49195056 | None:intergenic | 40.0% | |
| !! | TGTTGGTATCGGTAATGAGT+TGG | + | chr8_2:49195082-49195101 | None:intergenic | 40.0% |
| ACGACAAAGGCAAAGAATCA+TGG | + | chr8_2:49195161-49195180 | None:intergenic | 40.0% | |
| TTTGCCTTTGTCGTCATCAA+CGG | - | chr8_2:49195167-49195186 | Msa1252330:intron | 40.0% | |
| ATAGGAGACAGCTACTTACA+AGG | - | chr8_2:49195262-49195281 | Msa1252330:CDS | 40.0% | |
| AGACTCACCTTCTTTAATCC+AGG | + | chr8_2:49195315-49195334 | None:intergenic | 40.0% | |
| !! | TTCTAAGATTAGGCATGTCG+TGG | - | chr8_2:49195407-49195426 | Msa1252330:CDS | 40.0% |
| GTTTCGACACTCTGTTGAAT+TGG | - | chr8_2:49195487-49195506 | Msa1252330:CDS | 40.0% | |
| ! | TACTTTGATTCGACACAGCT+TGG | - | chr8_2:49195551-49195570 | Msa1252330:CDS | 40.0% |
| ! | ACTTTGATTCGACACAGCTT+GGG | - | chr8_2:49195552-49195571 | Msa1252330:CDS | 40.0% |
| GGAAGCAATATTGATCAAGG+AGG | - | chr8_2:49195601-49195620 | Msa1252330:intron | 40.0% | |
| AAAGCGGTGCAAACATTGAA+TGG | + | chr8_2:49196286-49196305 | None:intergenic | 40.0% | |
| ! | CAGGGAATCAATTTTAGGCT+TGG | - | chr8_2:49197206-49197225 | Msa1252330:intron | 40.0% |
| CCAATTTCTACGGATAACCA+TGG | + | chr8_2:49197581-49197600 | None:intergenic | 40.0% | |
| CCATGGTTATCCGTAGAAAT+TGG | - | chr8_2:49197578-49197597 | Msa1252330:intron | 40.0% | |
| !! | TATTAGTGGTGTCGTCATGT+CGG | - | chr8_2:49198576-49198595 | Msa1252330:intron | 40.0% |
| CAACTTGAAGAACGTGTGAA+AGG | - | chr8_2:49198709-49198728 | Msa1252330:intron | 40.0% | |
| GACATCAAGAAGAAAGACAC+AGG | - | chr8_2:49198742-49198761 | Msa1252330:intron | 40.0% | |
| GCGAAATGAATCACTTGTAG+AGG | - | chr8_2:49198849-49198868 | Msa1252330:intron | 40.0% | |
| ACTTGTAGAGGTTGAAGCTA+GGG | - | chr8_2:49198861-49198880 | Msa1252330:intron | 40.0% | |
| ATTCATTGTGGCATGCAAGA+GGG | - | chr8_2:49198910-49198929 | Msa1252330:intron | 40.0% | |
| GAGATGAAGAAGTTGAAGCT+GGG | + | chr8_2:49198956-49198975 | None:intergenic | 40.0% | |
| AGAGATGAAGAAGTTGAAGC+TGG | + | chr8_2:49198957-49198976 | None:intergenic | 40.0% | |
| ACTACCAATGTCTTGCCATT+TGG | - | chr8_2:49198985-49199004 | Msa1252330:CDS | 40.0% | |
| AGGTGGTTAAATACACCTTG+AGG | - | chr8_2:49199104-49199123 | Msa1252330:CDS | 40.0% | |
| GTGCTCTAGCAAATGTTTGT+AGG | + | chr8_2:49199185-49199204 | None:intergenic | 40.0% | |
| !! | GGGGAATTGGTCTTACGATT+TGG | - | chr8_2:49194724-49194743 | Msa1252330:CDS | 45.0% |
| GATCTTGTGGTGTCTGATAC+AGG | + | chr8_2:49194969-49194988 | None:intergenic | 45.0% | |
| GGGACACTGAATTGATCTTG+TGG | + | chr8_2:49194982-49195001 | None:intergenic | 45.0% | |
| !! | GAATCATGGTGTTGCTCAGT+TGG | + | chr8_2:49195147-49195166 | None:intergenic | 45.0% |
| GCTTCTTCGAATTTGACCCT+TGG | + | chr8_2:49195197-49195216 | None:intergenic | 45.0% | |
| ! | GAACTTTCGGCCTTTTTACC+TGG | - | chr8_2:49195294-49195313 | Msa1252330:CDS | 45.0% |
| !! | GCACGGACACTTCTAAGATT+AGG | - | chr8_2:49195397-49195416 | Msa1252330:CDS | 45.0% |
| ! | TCGTGGTGTCAGACATATGT+CGG | - | chr8_2:49195424-49195443 | Msa1252330:CDS | 45.0% |
| TATGTCGGACCTACTTAGAC+CGG | - | chr8_2:49195439-49195458 | Msa1252330:CDS | 45.0% | |
| GCAATATTGATCAAGGAGGG+CGG | - | chr8_2:49195605-49195624 | Msa1252330:intron | 45.0% | |
| CAAGGAGGGCGGTTAAAAAA+AGG | - | chr8_2:49195616-49195635 | Msa1252330:intron | 45.0% | |
| ! | TGTTCGCACGAGTCTTTTAC+TGG | + | chr8_2:49195789-49195808 | None:intergenic | 45.0% |
| AAAGACTCGTGCGAACATTG+AGG | - | chr8_2:49195792-49195811 | Msa1252330:intron | 45.0% | |
| CACTTGTAGAGGTTGAAGCT+AGG | - | chr8_2:49198860-49198879 | Msa1252330:intron | 45.0% | |
| AGGTTGAAGCTAGGGTTCTA+GGG | - | chr8_2:49198869-49198888 | Msa1252330:intron | 45.0% | |
| GATTCATTGTGGCATGCAAG+AGG | - | chr8_2:49198909-49198928 | Msa1252330:intron | 45.0% | |
| TTCATTGTGGCATGCAAGAG+GGG | - | chr8_2:49198911-49198930 | Msa1252330:intron | 45.0% | |
| TGACATCGCCATTATTGCTC+AGG | - | chr8_2:49199017-49199036 | Msa1252330:CDS | 45.0% | |
| TTAAATACACCTTGAGGCGC+AGG | - | chr8_2:49199110-49199129 | Msa1252330:CDS | 45.0% | |
| !! | AAAAAAAAAATTAAATATAG+GGG | - | chr8_2:49197352-49197371 | Msa1252330:intron | 5.0% |
| AGGAGAATCCATGGGGGAAT+TGG | - | chr8_2:49194711-49194730 | Msa1252330:CDS | 50.0% | |
| TCGTAAGACCAATTCCCCCA+TGG | + | chr8_2:49194722-49194741 | None:intergenic | 50.0% | |
| AGTGTCCCTATTGCCACAAC+TGG | - | chr8_2:49194994-49195013 | Msa1252330:intron | 50.0% | |
| CTAGGCCAGTTGTGGCAATA+GGG | + | chr8_2:49195002-49195021 | None:intergenic | 50.0% | |
| ACTAGGCCAGTTGTGGCAAT+AGG | + | chr8_2:49195003-49195022 | None:intergenic | 50.0% | |
| ! | GTTGTTGACTAGGCCAGTTG+TGG | + | chr8_2:49195010-49195029 | None:intergenic | 50.0% |
| !! | GGTATCGGTAATGAGTTGGC+TGG | + | chr8_2:49195078-49195097 | None:intergenic | 50.0% |
| !! | TCATGGTGTTGCTCAGTTGG+TGG | + | chr8_2:49195144-49195163 | None:intergenic | 50.0% |
| !! | CTAGCCGTTGATGACGACAA+AGG | + | chr8_2:49195174-49195193 | None:intergenic | 50.0% |
| !! | AGTGTCTCAGAAGCGCTTCT+AGG | + | chr8_2:49195219-49195238 | None:intergenic | 50.0% |
| ! | TTTGGGACACCGGTCTAAGT+AGG | + | chr8_2:49195451-49195470 | None:intergenic | 50.0% |
| GAGGTTGAAGCTAGGGTTCT+AGG | - | chr8_2:49198868-49198887 | Msa1252330:intron | 50.0% | |
| ! | TCGTCATCAACGGCTAGCCA+AGG | - | chr8_2:49195177-49195196 | Msa1252330:intron | 55.0% |
| ! | CGTCATCAACGGCTAGCCAA+GGG | - | chr8_2:49195178-49195197 | Msa1252330:intron | 55.0% |
| TGGCATGCAAGAGGGGATTG+TGG | - | chr8_2:49198918-49198937 | Msa1252330:intron | 55.0% | |
| TTTAGGCAACCTGCGCCTCA+AGG | + | chr8_2:49199122-49199141 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 49194707 | 49199561 | 49194707 | ID=Msa1252330;Name=Msa1252330 |
| chr8_2 | mRNA | 49194707 | 49199561 | 49194707 | ID=Msa1252330-mRNA-1;Parent=Msa1252330;Name=Msa1252330-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|0.75|1|1|4|0|309 |
| chr8_2 | exon | 49199523 | 49199561 | 49199523 | ID=Msa1252330-mRNA-1:exon:14901;Parent=Msa1252330-mRNA-1 |
| chr8_2 | exon | 49198942 | 49199364 | 49198942 | ID=Msa1252330-mRNA-1:exon:14900;Parent=Msa1252330-mRNA-1 |
| chr8_2 | exon | 49195230 | 49195604 | 49195230 | ID=Msa1252330-mRNA-1:exon:14899;Parent=Msa1252330-mRNA-1 |
| chr8_2 | exon | 49194707 | 49194799 | 49194707 | ID=Msa1252330-mRNA-1:exon:14898;Parent=Msa1252330-mRNA-1 |
| chr8_2 | CDS | 49199523 | 49199561 | 49199523 | ID=Msa1252330-mRNA-1:cds;Parent=Msa1252330-mRNA-1 |
| chr8_2 | CDS | 49198942 | 49199364 | 49198942 | ID=Msa1252330-mRNA-1:cds;Parent=Msa1252330-mRNA-1 |
| chr8_2 | CDS | 49195230 | 49195604 | 49195230 | ID=Msa1252330-mRNA-1:cds;Parent=Msa1252330-mRNA-1 |
| chr8_2 | CDS | 49194707 | 49194799 | 49194707 | ID=Msa1252330-mRNA-1:cds;Parent=Msa1252330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
