Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1257150 | XP_039689701.1 | 83.588 | 524 | 47 | 3 | 66 | 556 | 3 | 520 | 0.0 | 902 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1257150 | sp|F4IXE7|IDM1_ARATH | 32.458 | 419 | 245 | 14 | 144 | 538 | 619 | 1023 | 4.28e-57 | 210 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1257150 | A0A072UPL4 | 82.634 | 524 | 47 | 4 | 66 | 556 | 3 | 515 | 0.0 | 886 |
Gene ID | Type | Classification |
---|---|---|
Msa1257150 | TR | PHD |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1257150 | MtrunA17_Chr4g0055731 | 77.099 | 524 | 47 | 5 | 66 | 556 | 3 | 486 | 0.0 | 812 |
Msa1257150 | MtrunA17_Chr1g0205451 | 34.679 | 421 | 239 | 12 | 143 | 538 | 603 | 1012 | 6.81e-66 | 233 |
Msa1257150 | MtrunA17_Chr1g0185491 | 32.701 | 422 | 248 | 10 | 143 | 538 | 809 | 1220 | 5.33e-63 | 224 |
Msa1257150 | MtrunA17_Chr2g0316251 | 30.024 | 423 | 262 | 13 | 140 | 538 | 754 | 1166 | 4.77e-53 | 195 |
Msa1257150 | MtrunA17_Chr5g0430361 | 28.289 | 456 | 281 | 17 | 112 | 538 | 619 | 1057 | 2.44e-48 | 181 |
Msa1257150 | MtrunA17_Chr3g0105291 | 26.522 | 460 | 284 | 15 | 123 | 555 | 585 | 1017 | 1.53e-45 | 172 |
Msa1257150 | MtrunA17_Chr7g0270101 | 28.894 | 398 | 233 | 12 | 145 | 511 | 383 | 761 | 2.20e-42 | 162 |
Msa1257150 | MtrunA17_Chr5g0407251 | 26.932 | 427 | 268 | 11 | 146 | 538 | 3 | 419 | 2.27e-40 | 151 |
Msa1257150 | MtrunA17_Chr5g0407211 | 26.698 | 427 | 269 | 11 | 146 | 538 | 3 | 419 | 1.63e-39 | 149 |
Msa1257150 | MtrunA17_Chr3g0134821 | 23.467 | 473 | 300 | 14 | 106 | 538 | 382 | 832 | 8.62e-33 | 134 |
Msa1257150 | MtrunA17_Chr3g0134811 | 28.076 | 317 | 196 | 9 | 240 | 538 | 489 | 791 | 4.22e-32 | 131 |
Msa1257150 | MtrunA17_Chr7g0259981 | 28.618 | 304 | 196 | 8 | 251 | 550 | 17 | 303 | 2.58e-31 | 123 |
Msa1257150 | MtrunA17_Chr1g0182481 | 24.153 | 443 | 235 | 15 | 156 | 528 | 472 | 883 | 9.05e-28 | 118 |
Msa1257150 | MtrunA17_Chr1g0179841 | 23.696 | 460 | 255 | 13 | 156 | 538 | 362 | 802 | 1.57e-27 | 117 |
Msa1257150 | MtrunA17_Chr3g0134851 | 27.877 | 391 | 215 | 11 | 173 | 538 | 116 | 464 | 1.24e-26 | 113 |
Msa1257150 | MtrunA17_Chr7g0265211 | 22.273 | 440 | 241 | 14 | 156 | 516 | 507 | 924 | 4.26e-26 | 113 |
Msa1257150 | MtrunA17_Chr2g0320451 | 25.714 | 175 | 125 | 2 | 365 | 536 | 849 | 1021 | 1.83e-17 | 86.3 |
Msa1257150 | MtrunA17_Chr4g0025251 | 25.000 | 260 | 162 | 7 | 308 | 539 | 448 | 702 | 9.22e-17 | 84.0 |
Msa1257150 | MtrunA17_Chr4g0028111 | 21.130 | 407 | 216 | 12 | 186 | 512 | 181 | 562 | 2.36e-15 | 79.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1257150 | AT4G14920.3 | 35.154 | 421 | 236 | 11 | 143 | 539 | 577 | 984 | 4.72e-69 | 241 |
Msa1257150 | AT4G14920.2 | 35.154 | 421 | 236 | 11 | 143 | 539 | 577 | 984 | 4.88e-69 | 241 |
Msa1257150 | AT4G14920.1 | 35.154 | 421 | 236 | 11 | 143 | 539 | 577 | 984 | 4.88e-69 | 241 |
Msa1257150 | AT5G36740.5 | 33.560 | 441 | 258 | 10 | 125 | 539 | 519 | 950 | 1.40e-68 | 240 |
Msa1257150 | AT5G36740.1 | 33.560 | 441 | 258 | 10 | 125 | 539 | 519 | 950 | 1.40e-68 | 240 |
Msa1257150 | AT5G36740.4 | 33.645 | 428 | 244 | 10 | 143 | 539 | 389 | 807 | 7.15e-68 | 237 |
Msa1257150 | AT1G05380.3 | 33.023 | 430 | 243 | 12 | 143 | 543 | 517 | 930 | 1.87e-66 | 234 |
Msa1257150 | AT1G05380.1 | 33.023 | 430 | 243 | 12 | 143 | 543 | 517 | 930 | 1.87e-66 | 234 |
Msa1257150 | AT1G05380.2 | 33.023 | 430 | 243 | 12 | 143 | 543 | 517 | 930 | 1.87e-66 | 234 |
Msa1257150 | AT5G36670.4 | 31.291 | 457 | 261 | 12 | 125 | 539 | 519 | 964 | 2.29e-58 | 211 |
Msa1257150 | AT5G36670.5 | 31.291 | 457 | 261 | 12 | 125 | 539 | 519 | 964 | 2.29e-58 | 211 |
Msa1257150 | AT3G14980.5 | 32.458 | 419 | 245 | 14 | 144 | 538 | 574 | 978 | 3.32e-58 | 210 |
Msa1257150 | AT3G14980.6 | 32.458 | 419 | 245 | 14 | 144 | 538 | 619 | 1023 | 4.35e-58 | 210 |
Msa1257150 | AT3G14980.1 | 32.458 | 419 | 245 | 14 | 144 | 538 | 619 | 1023 | 4.35e-58 | 210 |
Msa1257150 | AT3G14980.2 | 32.458 | 419 | 245 | 14 | 144 | 538 | 619 | 1023 | 4.35e-58 | 210 |
Msa1257150 | AT3G14980.3 | 32.458 | 419 | 245 | 14 | 144 | 538 | 619 | 1023 | 1.04e-57 | 208 |
Msa1257150 | AT5G36670.3 | 31.306 | 444 | 247 | 12 | 143 | 539 | 389 | 821 | 2.14e-57 | 207 |
Msa1257150 | AT5G36670.1 | 30.835 | 467 | 260 | 13 | 125 | 539 | 519 | 974 | 5.49e-57 | 207 |
Msa1257150 | AT5G36670.2 | 32.461 | 382 | 224 | 9 | 125 | 480 | 519 | 892 | 2.74e-52 | 192 |
Msa1257150 | AT5G36740.2 | 32.461 | 382 | 224 | 9 | 125 | 480 | 519 | 892 | 2.74e-52 | 192 |
Msa1257150 | AT5G36740.3 | 32.461 | 382 | 224 | 9 | 125 | 480 | 519 | 892 | 2.74e-52 | 192 |
Msa1257150 | AT5G58610.4 | 27.778 | 432 | 265 | 14 | 140 | 539 | 362 | 778 | 2.26e-40 | 157 |
Msa1257150 | AT5G58610.3 | 27.778 | 432 | 265 | 14 | 140 | 539 | 593 | 1009 | 3.79e-40 | 156 |
Msa1257150 | AT5G58610.8 | 27.778 | 432 | 265 | 14 | 140 | 539 | 593 | 1009 | 3.83e-40 | 156 |
Msa1257150 | AT5G58610.2 | 27.778 | 432 | 265 | 14 | 140 | 539 | 593 | 1009 | 3.83e-40 | 156 |
Msa1257150 | AT5G58610.7 | 27.778 | 432 | 265 | 14 | 140 | 539 | 584 | 1000 | 4.00e-40 | 156 |
Msa1257150 | AT5G58610.5 | 27.778 | 432 | 265 | 14 | 140 | 539 | 584 | 1000 | 5.65e-40 | 156 |
Msa1257150 | AT5G58610.1 | 26.303 | 422 | 258 | 13 | 140 | 539 | 584 | 974 | 3.09e-37 | 148 |
Msa1257150 | AT5G58610.6 | 26.303 | 422 | 258 | 13 | 140 | 539 | 584 | 974 | 4.44e-37 | 147 |
Msa1257150 | AT3G14980.4 | 31.003 | 329 | 190 | 13 | 144 | 448 | 619 | 934 | 1.18e-34 | 140 |
Msa1257150 | AT3G53680.1 | 24.169 | 451 | 252 | 15 | 156 | 538 | 403 | 831 | 7.57e-32 | 131 |
Msa1257150 | AT3G53680.2 | 24.169 | 451 | 252 | 15 | 156 | 538 | 405 | 833 | 8.09e-32 | 131 |
Msa1257150 | AT5G58610.10 | 27.513 | 378 | 228 | 13 | 140 | 485 | 593 | 956 | 1.19e-31 | 130 |
Msa1257150 | AT5G58610.9 | 27.513 | 378 | 228 | 13 | 140 | 485 | 584 | 947 | 2.03e-31 | 130 |
Msa1257150 | AT2G37520.1 | 23.516 | 455 | 251 | 14 | 156 | 538 | 386 | 815 | 2.44e-31 | 129 |
Msa1257150 | AT2G27980.1 | 24.301 | 465 | 250 | 15 | 156 | 538 | 613 | 1057 | 1.70e-29 | 124 |
Msa1257150 | AT2G36720.1 | 23.861 | 461 | 249 | 16 | 156 | 536 | 533 | 971 | 2.15e-28 | 120 |
Msa1257150 | AT2G36720.2 | 23.861 | 461 | 249 | 16 | 156 | 536 | 533 | 971 | 2.15e-28 | 120 |
Msa1257150 | AT5G58610.11 | 26.765 | 340 | 203 | 13 | 140 | 447 | 584 | 909 | 3.57e-23 | 104 |
Msa1257150 | AT5G63900.1 | 25.424 | 295 | 205 | 8 | 247 | 538 | 258 | 540 | 1.99e-21 | 98.6 |
Find 118 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTCCCATTGATATTATTT+TGG | 0.141230 | 8_2:-57569538 | None:intergenic |
ACGAATTTGCCATTTGTTAA+TGG | 0.158481 | 8_2:+57570404 | Msa1257150:CDS |
TCACTTATTTCCACATAATT+TGG | 0.186213 | 8_2:-57568199 | None:intergenic |
TCCCAGAAATTACCTATTTC+AGG | 0.195115 | 8_2:-57568319 | None:intergenic |
GACCTGAAATAGGTAATTTC+TGG | 0.234540 | 8_2:+57568317 | Msa1257150:CDS |
CTTTCAACCATTTACTAATC+AGG | 0.274878 | 8_2:-57568828 | None:intergenic |
ATTTACTAATCAGGATGTTT+TGG | 0.283205 | 8_2:-57568819 | None:intergenic |
TTGAAAATTCGACCGGTTAT+CGG | 0.303297 | 8_2:-57568673 | None:intergenic |
AAAACATCCTGATTAGTAAA+TGG | 0.312020 | 8_2:+57568821 | Msa1257150:CDS |
TGCTTCTAATTGACAGTATT+AGG | 0.320200 | 8_2:-57570973 | None:intergenic |
TCCGGATTAATACTCGTTTC+CGG | 0.320410 | 8_2:-57568415 | None:intergenic |
TCAACAGTTTGTGGATTAGA+TGG | 0.321798 | 8_2:-57570796 | None:intergenic |
TGGACTTGAATGAGCCATTC+GGG | 0.345809 | 8_2:+57570938 | Msa1257150:CDS |
TCCATTGGCAAACTTTGTTC+CGG | 0.346997 | 8_2:-57568433 | None:intergenic |
CCTGGACTCTACAGATTTCA+TGG | 0.350659 | 8_2:+57570327 | Msa1257150:intron |
TTGAAGGGTTAGAAGCAAAC+TGG | 0.364828 | 8_2:+57568248 | Msa1257150:CDS |
CTTGTTTCGTTCATTGATGA+TGG | 0.366832 | 8_2:-57568463 | None:intergenic |
AAATTACCTATTTCAGGTCT+TGG | 0.368746 | 8_2:-57568313 | None:intergenic |
CGTAGACCAAGACCTGAAAT+AGG | 0.369525 | 8_2:+57568307 | Msa1257150:CDS |
TAAACAAACAATGTCATGTA+TGG | 0.389738 | 8_2:-57568890 | None:intergenic |
GCATACCTCTTTACAACTTA+CGG | 0.394078 | 8_2:-57569398 | None:intergenic |
TGCAGCTGCTTGCATGTTGA+TGG | 0.397741 | 8_2:+57569637 | Msa1257150:CDS |
GCAACCATACAAACGCATTT+CGG | 0.399165 | 8_2:+57568774 | Msa1257150:CDS |
GTTTGTTTAGTTTGTGGAAA+AGG | 0.400119 | 8_2:+57568904 | Msa1257150:CDS |
TGAAATAGCTACCATTGTTC+CGG | 0.403012 | 8_2:+57568396 | Msa1257150:CDS |
GCTATTTCATTCACCGATGA+TGG | 0.410514 | 8_2:-57568382 | None:intergenic |
TCAACAAACAAGTCATAATC+TGG | 0.410645 | 8_2:+57568492 | Msa1257150:CDS |
ATGGGAATGAGAGGTATTCT+TGG | 0.411367 | 8_2:+57569552 | Msa1257150:CDS |
TACACTGCTTGTTGCATTGG+CGG | 0.412327 | 8_2:-57569204 | None:intergenic |
ACTTACACTGCTTGTTGCAT+TGG | 0.420126 | 8_2:-57569207 | None:intergenic |
GACATTGTTTGTTTAGTTTG+TGG | 0.426333 | 8_2:+57568898 | Msa1257150:CDS |
CTGCAAGTGCAAATACTGTA+AGG | 0.426643 | 8_2:+57569144 | Msa1257150:CDS |
GGAATCCAAAATAATATCAA+TGG | 0.427814 | 8_2:+57569533 | Msa1257150:CDS |
ATTAAGCAAAAGACTTCTAC+TGG | 0.430490 | 8_2:+57570918 | Msa1257150:CDS |
CTGGACTTGAATGAGCCATT+CGG | 0.434486 | 8_2:+57570937 | Msa1257150:CDS |
GAAGTCCCCGCTGTTGCGCT+TGG | 0.436355 | 8_2:-57568541 | None:intergenic |
AAAGATTGATGAGAAATTGA+AGG | 0.437819 | 8_2:+57569502 | Msa1257150:intron |
GAGAAATTGAAGGGATCAAT+CGG | 0.439072 | 8_2:+57569512 | Msa1257150:CDS |
ACCTGAAATAGGTAATTTCT+GGG | 0.445985 | 8_2:+57568318 | Msa1257150:CDS |
CAATTATCTCCATTAACAAA+TGG | 0.453252 | 8_2:-57570413 | None:intergenic |
ATGTTGATGGAAGAAGCTTT+TGG | 0.456514 | 8_2:+57569650 | Msa1257150:CDS |
GTTAATGGAGATAATTGAAT+CGG | 0.460264 | 8_2:+57570419 | Msa1257150:CDS |
TTGCTTAATCGTATAGCTCC+GGG | 0.462605 | 8_2:-57570904 | None:intergenic |
CTCAGGAAAACGACAACCAT+TGG | 0.462642 | 8_2:+57569110 | Msa1257150:CDS |
GAAACTCCAAGCGCAACAGC+GGG | 0.464068 | 8_2:+57568535 | Msa1257150:CDS |
TTGGAGAGTCCTCCAACAAA+TGG | 0.464964 | 8_2:+57569571 | Msa1257150:CDS |
TTTGCTTAATCGTATAGCTC+CGG | 0.467808 | 8_2:-57570905 | None:intergenic |
GCCACCGAAATGCGTTTGTA+TGG | 0.477551 | 8_2:-57568778 | None:intergenic |
TTCCACATTTCAACAGTTTG+TGG | 0.481433 | 8_2:-57570805 | None:intergenic |
TTCGAAGTCTTGAAGTTGAA+AGG | 0.481443 | 8_2:+57570764 | Msa1257150:CDS |
AGAAACTCCAAGCGCAACAG+CGG | 0.487445 | 8_2:+57568534 | Msa1257150:CDS |
CCGAGGTGCGTTACCATGAT+GGG | 0.489289 | 8_2:+57568644 | Msa1257150:CDS |
GAATCCAAAATAATATCAAT+GGG | 0.493433 | 8_2:+57569534 | Msa1257150:CDS |
TTGTTCCGTAAGTTGTAAAG+AGG | 0.493762 | 8_2:+57569393 | Msa1257150:CDS |
ACCGAGGTGCGTTACCATGA+TGG | 0.496123 | 8_2:+57568643 | Msa1257150:CDS |
TAGCTCCGGGGAACATCAAA+AGG | 0.501144 | 8_2:-57570891 | None:intergenic |
ATGATAACAGACACACATAC+TGG | 0.502452 | 8_2:+57569674 | Msa1257150:CDS |
TGGAAAAGGAGAAGATGAAG+GGG | 0.508556 | 8_2:+57568918 | Msa1257150:CDS |
TCCGGAAACGAGTATTAATC+CGG | 0.511461 | 8_2:+57568414 | Msa1257150:CDS |
TGTGGAAAAGGAGAAGATGA+AGG | 0.530192 | 8_2:+57568916 | Msa1257150:CDS |
TCCGGAACAAAGTTTGCCAA+TGG | 0.531404 | 8_2:+57568432 | Msa1257150:CDS |
AAGATTGATGAGAAATTGAA+GGG | 0.532048 | 8_2:+57569503 | Msa1257150:intron |
AGCACAAGAACGGTGATAAG+TGG | 0.533107 | 8_2:-57568968 | None:intergenic |
GAAAGTGAGTCAAATATTGA+AGG | 0.536289 | 8_2:+57568232 | Msa1257150:CDS |
GTCGCAACAGCTACATAAGA+TGG | 0.537125 | 8_2:-57568701 | None:intergenic |
GATGGCAGCATATACTTTGA+GGG | 0.537214 | 8_2:+57568165 | None:intergenic |
GGCTCCATTGAAAATTCGAC+CGG | 0.537301 | 8_2:-57568680 | None:intergenic |
GATGATGGAACTGTTTCCAT+TGG | 0.538815 | 8_2:-57568448 | None:intergenic |
AACTGAAACACCTCCATCAT+CGG | 0.540100 | 8_2:+57568369 | Msa1257150:CDS |
AGTTGTCAACCATGCTAGGA+TGG | 0.543516 | 8_2:-57568599 | None:intergenic |
AGATGGCAGCATATACTTTG+AGG | 0.544295 | 8_2:+57568164 | None:intergenic |
GACCGTCGACCTCGTCGACC+TGG | 0.547724 | 8_2:-57568277 | None:intergenic |
CTGTAAGGGTGATGATGAAG+AGG | 0.550087 | 8_2:+57569159 | Msa1257150:CDS |
ACTTGCAAGGAAATTGATGA+AGG | 0.553512 | 8_2:+57568619 | Msa1257150:CDS |
GCCTCATCTGTGGCAATGAA+AGG | 0.555749 | 8_2:-57570369 | None:intergenic |
TGCAAGTTGTCAACCATGCT+AGG | 0.558541 | 8_2:-57568603 | None:intergenic |
GCCTTTCATTGCCACAGATG+AGG | 0.563244 | 8_2:+57570368 | Msa1257150:CDS |
CCCATCATGGTAACGCACCT+CGG | 0.563559 | 8_2:-57568644 | None:intergenic |
GATTAGTAAATGGTTGAAAG+AGG | 0.563585 | 8_2:+57568831 | Msa1257150:CDS |
AAACAAACAATGTCATGTAT+GGG | 0.563802 | 8_2:-57568889 | None:intergenic |
TTATGTAATAAGCAATTCAA+AGG | 0.566767 | 8_2:+57569613 | Msa1257150:CDS |
ACGCACAAGACCAAATTATG+TGG | 0.574274 | 8_2:+57568189 | Msa1257150:CDS |
ATAATATCAATGGGAATGAG+AGG | 0.575607 | 8_2:+57569543 | Msa1257150:CDS |
CTGGACTCTACAGATTTCAT+GGG | 0.578606 | 8_2:+57570328 | Msa1257150:intron |
AGTTTGTGGATTAGATGGAA+TGG | 0.581324 | 8_2:-57570791 | None:intergenic |
GCCTCTGTATGCCTCATCTG+TGG | 0.584277 | 8_2:-57570379 | None:intergenic |
TGCTTAGATCAAATCTGAGG+AGG | 0.587040 | 8_2:+57570084 | Msa1257150:intron |
ATCCACAAACTGTTGAAATG+TGG | 0.588515 | 8_2:+57570803 | Msa1257150:CDS |
GCGACGAGGAAATCTCTGTA+TGG | 0.591878 | 8_2:+57568719 | Msa1257150:CDS |
GTGGAAAAGGAGAAGATGAA+GGG | 0.593089 | 8_2:+57568917 | Msa1257150:CDS |
TGAAGGGTTAGAAGCAAACT+GGG | 0.594789 | 8_2:+57568249 | Msa1257150:CDS |
AAAGTGAGTCAAATATTGAA+GGG | 0.601009 | 8_2:+57568233 | Msa1257150:CDS |
ACCATACAAACGCATTTCGG+TGG | 0.602664 | 8_2:+57568777 | Msa1257150:CDS |
AATACTCGTTTCCGGAACAA+TGG | 0.603556 | 8_2:-57568407 | None:intergenic |
TAATTGCTGCAGCTACCGTA+AGG | 0.611328 | 8_2:+57570156 | Msa1257150:CDS |
CCTGTATAAAAGCACAAGAA+CGG | 0.617850 | 8_2:-57568978 | None:intergenic |
GGCTGATCAACATCCCCGAA+TGG | 0.620641 | 8_2:-57570952 | None:intergenic |
ACAAGAACGGTGATAAGTGG+AGG | 0.625049 | 8_2:-57568965 | None:intergenic |
AGCATGGTTGACAACTTGCA+AGG | 0.627667 | 8_2:+57568606 | Msa1257150:CDS |
TGCAAGTGCAAATACTGTAA+GGG | 0.630487 | 8_2:+57569145 | Msa1257150:CDS |
ATTTCATTCACCGATGATGG+AGG | 0.630618 | 8_2:-57568379 | None:intergenic |
AACCAGGTCGACGAGGTCGA+CGG | 0.633162 | 8_2:+57568275 | Msa1257150:CDS |
TGCAGTAAGAACATAACCAA+TGG | 0.637831 | 8_2:-57569126 | None:intergenic |
AATTGCTTAGATCAAATCTG+AGG | 0.638264 | 8_2:+57570081 | Msa1257150:intron |
AACGCATTTCGGTGGCAAAG+CGG | 0.641653 | 8_2:+57568785 | Msa1257150:CDS |
CGAGGTGCGTTACCATGATG+GGG | 0.652213 | 8_2:+57568645 | Msa1257150:CDS |
CTTGCAAGGAAATTGATGAA+GGG | 0.653849 | 8_2:+57568620 | Msa1257150:CDS |
ACAAATGGATACGAAAAGTG+AGG | 0.660093 | 8_2:+57569586 | Msa1257150:CDS |
CACACATACTGGCGTCAATG+TGG | 0.663750 | 8_2:+57569685 | Msa1257150:CDS |
CTTATGTAGCTGTTGCGACG+AGG | 0.663870 | 8_2:+57568705 | Msa1257150:CDS |
GGAAAAGGAGAAGATGAAGG+GGG | 0.669030 | 8_2:+57568919 | Msa1257150:CDS |
CAAGAACGGTGATAAGTGGA+GGG | 0.669312 | 8_2:-57568964 | None:intergenic |
GCCACAGATGAGGCATACAG+AGG | 0.671197 | 8_2:+57570378 | Msa1257150:CDS |
AGAGTGTTCTATACAACCGC+AGG | 0.671533 | 8_2:+57569711 | Msa1257150:CDS |
TGCTTAATCGTATAGCTCCG+GGG | 0.678737 | 8_2:-57570903 | None:intergenic |
GGAAATTGATGAAGGGACCG+AGG | 0.685280 | 8_2:+57568627 | Msa1257150:CDS |
GGACTTGAATGAGCCATTCG+GGG | 0.695242 | 8_2:+57570939 | Msa1257150:CDS |
AAACTCCAAGCGCAACAGCG+GGG | 0.743032 | 8_2:+57568536 | Msa1257150:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTATAATGTTTTATTTC+TGG | - | chr8_2:57568577-57568596 | None:intergenic | 10.0% |
!!! | TTGAAATTTTTTCTTTTTTT+GGG | - | chr8_2:57570042-57570061 | None:intergenic | 10.0% |
!! | AAACTGAAAAAGATTTATTA+AGG | + | chr8_2:57569365-57569384 | Msa1257150:CDS | 15.0% |
!!! | CTTGAAATTTTTTCTTTTTT+TGG | - | chr8_2:57570043-57570062 | None:intergenic | 15.0% |
!!! | AATAATTTGTTATTTCTTCA+CGG | + | chr8_2:57570245-57570264 | Msa1257150:intron | 15.0% |
!!! | AATTTAATTCACTTGTTTTA+AGG | + | chr8_2:57570677-57570696 | Msa1257150:intron | 15.0% |
!!! | AGTTTACAAAATGATTTTGT+AGG | + | chr8_2:57569322-57569341 | Msa1257150:intron | 20.0% |
!! | AATCAAATACATGATATTTG+TGG | + | chr8_2:57569464-57569483 | Msa1257150:intron | 20.0% |
!! | ATCAAATACATGATATTTGT+GGG | + | chr8_2:57569465-57569484 | Msa1257150:intron | 20.0% |
!! | GAATCCAAAATAATATCAAT+GGG | + | chr8_2:57569534-57569553 | Msa1257150:CDS | 20.0% |
!! | TTATGTAATAAGCAATTCAA+AGG | + | chr8_2:57569613-57569632 | Msa1257150:CDS | 20.0% |
!! | TGGTAAAAAATATATTTGGT+TGG | - | chr8_2:57569791-57569810 | None:intergenic | 20.0% |
!!! | ACTTTAGATTAAAAGAGTAT+CGG | + | chr8_2:57569846-57569865 | Msa1257150:intron | 20.0% |
!!! | CTTTTTCAACTATTTTGTTT+TGG | + | chr8_2:57570204-57570223 | Msa1257150:intron | 20.0% |
!!! | ATAATTTGTTATTTCTTCAC+GGG | + | chr8_2:57570246-57570265 | Msa1257150:intron | 20.0% |
! | TCACTTATTTCCACATAATT+TGG | - | chr8_2:57568202-57568221 | None:intergenic | 25.0% |
! | AAAGTGAGTCAAATATTGAA+GGG | + | chr8_2:57568233-57568252 | Msa1257150:CDS | 25.0% |
!! | ATTTACTAATCAGGATGTTT+TGG | - | chr8_2:57568822-57568841 | None:intergenic | 25.0% |
! | AAAACATCCTGATTAGTAAA+TGG | + | chr8_2:57568821-57568840 | Msa1257150:CDS | 25.0% |
! | AAACAAACAATGTCATGTAT+GGG | - | chr8_2:57568892-57568911 | None:intergenic | 25.0% |
! | TAAACAAACAATGTCATGTA+TGG | - | chr8_2:57568893-57568912 | None:intergenic | 25.0% |
!! | TTTTTCTTTTGCTTACATGA+AGG | + | chr8_2:57569021-57569040 | Msa1257150:intron | 25.0% |
!! | TTTTCTTTTGCTTACATGAA+GGG | + | chr8_2:57569022-57569041 | Msa1257150:intron | 25.0% |
!!! | TCTTTTCATTTTTATACTGC+AGG | + | chr8_2:57569081-57569100 | Msa1257150:intron | 25.0% |
!!! | CTTTTCATTTTTATACTGCA+GGG | + | chr8_2:57569082-57569101 | Msa1257150:intron | 25.0% |
!! | AAAATGATTTTGTAGGTCAT+TGG | + | chr8_2:57569329-57569348 | Msa1257150:intron | 25.0% |
! | AAAGATTGATGAGAAATTGA+AGG | + | chr8_2:57569502-57569521 | Msa1257150:intron | 25.0% |
! | AAGATTGATGAGAAATTGAA+GGG | + | chr8_2:57569503-57569522 | Msa1257150:intron | 25.0% |
! | GGAATCCAAAATAATATCAA+TGG | + | chr8_2:57569533-57569552 | Msa1257150:CDS | 25.0% |
!! | CATTCCCATTGATATTATTT+TGG | - | chr8_2:57569541-57569560 | None:intergenic | 25.0% |
!! | AAAAATATATTTGGTTGGTG+CGG | - | chr8_2:57569786-57569805 | None:intergenic | 25.0% |
! | GCAGTGGTAAAAAATATATT+TGG | - | chr8_2:57569795-57569814 | None:intergenic | 25.0% |
!! | TAATCTAAAGTGTCATTACA+TGG | - | chr8_2:57569837-57569856 | None:intergenic | 25.0% |
!!! | CTTTAGATTAAAAGAGTATC+GGG | + | chr8_2:57569847-57569866 | Msa1257150:intron | 25.0% |
! | AGATTTGATCTAAGCAATTA+AGG | - | chr8_2:57570080-57570099 | None:intergenic | 25.0% |
!!! | GTTGAAAAAGTATCAACAAT+TGG | - | chr8_2:57570194-57570213 | None:intergenic | 25.0% |
!!! | CAACTATTTTGTTTTGGTTA+TGG | + | chr8_2:57570210-57570229 | Msa1257150:intron | 25.0% |
!! | TATCATTGAATTGTTATTCC+TGG | + | chr8_2:57570309-57570328 | Msa1257150:intron | 25.0% |
! | CAATTATCTCCATTAACAAA+TGG | - | chr8_2:57570416-57570435 | None:intergenic | 25.0% |
! | GTTAATGGAGATAATTGAAT+CGG | + | chr8_2:57570419-57570438 | Msa1257150:CDS | 25.0% |
!!! | TGCATATCACATTTTGAAAA+TGG | - | chr8_2:57570513-57570532 | None:intergenic | 25.0% |
! | AATTAAGTTCAATGGAAAAG+TGG | - | chr8_2:57570628-57570647 | None:intergenic | 25.0% |
! | ATGAATGCAATTAAGTTCAA+TGG | - | chr8_2:57570636-57570655 | None:intergenic | 25.0% |
! | CAAAAAGTTGAAGAAAGATA+TGG | + | chr8_2:57570858-57570877 | Msa1257150:CDS | 25.0% |
GAAAGTGAGTCAAATATTGA+AGG | + | chr8_2:57568232-57568251 | Msa1257150:CDS | 30.0% | |
! | AAATTACCTATTTCAGGTCT+TGG | - | chr8_2:57568316-57568335 | None:intergenic | 30.0% |
ACCTGAAATAGGTAATTTCT+GGG | + | chr8_2:57568318-57568337 | Msa1257150:CDS | 30.0% | |
TCAACAAACAAGTCATAATC+TGG | + | chr8_2:57568492-57568511 | Msa1257150:CDS | 30.0% | |
ATAAAAAAACCATCCTAGCA+TGG | + | chr8_2:57568590-57568609 | Msa1257150:CDS | 30.0% | |
CTTTCAACCATTTACTAATC+AGG | - | chr8_2:57568831-57568850 | None:intergenic | 30.0% | |
GATTAGTAAATGGTTGAAAG+AGG | + | chr8_2:57568831-57568850 | Msa1257150:CDS | 30.0% | |
!! | GACATTGTTTGTTTAGTTTG+TGG | + | chr8_2:57568898-57568917 | Msa1257150:CDS | 30.0% |
!! | GTTTGTTTAGTTTGTGGAAA+AGG | + | chr8_2:57568904-57568923 | Msa1257150:CDS | 30.0% |
TTGAAATATCAGATGATGAC+CGG | - | chr8_2:57569238-57569257 | None:intergenic | 30.0% | |
AGTTATGGTCATGAAAACAA+AGG | - | chr8_2:57569293-57569312 | None:intergenic | 30.0% | |
TAAACTACTTCAGTGAGTTA+TGG | - | chr8_2:57569308-57569327 | None:intergenic | 30.0% | |
!!! | GTATGCATTCATTTTTTCTG+TGG | + | chr8_2:57569415-57569434 | Msa1257150:intron | 30.0% |
ATAATATCAATGGGAATGAG+AGG | + | chr8_2:57569543-57569562 | Msa1257150:CDS | 30.0% | |
AATTGCTTAGATCAAATCTG+AGG | + | chr8_2:57570081-57570100 | Msa1257150:intron | 30.0% | |
AAGTATCAACAATTGGAAAG+AGG | - | chr8_2:57570187-57570206 | None:intergenic | 30.0% | |
! | ACGAATTTGCCATTTGTTAA+TGG | + | chr8_2:57570404-57570423 | Msa1257150:CDS | 30.0% |
ATACAACATGCATGAGATAT+AGG | - | chr8_2:57570462-57570481 | None:intergenic | 30.0% | |
GCAAAAATATAACTTCAGTG+AGG | + | chr8_2:57570828-57570847 | Msa1257150:CDS | 30.0% | |
ATTAAGCAAAAGACTTCTAC+TGG | + | chr8_2:57570918-57570937 | Msa1257150:CDS | 30.0% | |
GACCTGAAATAGGTAATTTC+TGG | + | chr8_2:57568317-57568336 | Msa1257150:CDS | 35.0% | |
TCCCAGAAATTACCTATTTC+AGG | - | chr8_2:57568322-57568341 | None:intergenic | 35.0% | |
TGAAATAGCTACCATTGTTC+CGG | + | chr8_2:57568396-57568415 | Msa1257150:CDS | 35.0% | |
CTTGTTTCGTTCATTGATGA+TGG | - | chr8_2:57568466-57568485 | None:intergenic | 35.0% | |
ACTTGCAAGGAAATTGATGA+AGG | + | chr8_2:57568619-57568638 | Msa1257150:CDS | 35.0% | |
CTTGCAAGGAAATTGATGAA+GGG | + | chr8_2:57568620-57568639 | Msa1257150:CDS | 35.0% | |
TTGAAAATTCGACCGGTTAT+CGG | - | chr8_2:57568676-57568695 | None:intergenic | 35.0% | |
! | ATAACCGGTCGAATTTTCAA+TGG | + | chr8_2:57568676-57568695 | Msa1257150:CDS | 35.0% |
!! | TACTAATCAGGATGTTTTGG+AGG | - | chr8_2:57568819-57568838 | None:intergenic | 35.0% |
AAGAGGATGAACAAAAACGT+CGG | + | chr8_2:57568848-57568867 | Msa1257150:CDS | 35.0% | |
! | CCTGTATAAAAGCACAAGAA+CGG | - | chr8_2:57568981-57569000 | None:intergenic | 35.0% |
TGCAGTAAGAACATAACCAA+TGG | - | chr8_2:57569129-57569148 | None:intergenic | 35.0% | |
TGCAAGTGCAAATACTGTAA+GGG | + | chr8_2:57569145-57569164 | Msa1257150:CDS | 35.0% | |
TATGGTCATGAAAACAAAGG+AGG | - | chr8_2:57569290-57569309 | None:intergenic | 35.0% | |
TTGTTCCGTAAGTTGTAAAG+AGG | + | chr8_2:57569393-57569412 | Msa1257150:CDS | 35.0% | |
GCATACCTCTTTACAACTTA+CGG | - | chr8_2:57569401-57569420 | None:intergenic | 35.0% | |
GAGAAATTGAAGGGATCAAT+CGG | + | chr8_2:57569512-57569531 | Msa1257150:CDS | 35.0% | |
!! | TTTTCGTATCCATTTGTTGG+AGG | - | chr8_2:57569583-57569602 | None:intergenic | 35.0% |
! | CACTTTTCGTATCCATTTGT+TGG | - | chr8_2:57569586-57569605 | None:intergenic | 35.0% |
ACAAATGGATACGAAAAGTG+AGG | + | chr8_2:57569586-57569605 | Msa1257150:CDS | 35.0% | |
!! | ATGTTGATGGAAGAAGCTTT+TGG | + | chr8_2:57569650-57569669 | Msa1257150:CDS | 35.0% |
!! | TGTTGATGGAAGAAGCTTTT+GGG | + | chr8_2:57569651-57569670 | Msa1257150:CDS | 35.0% |
ATGATAACAGACACACATAC+TGG | + | chr8_2:57569674-57569693 | Msa1257150:CDS | 35.0% | |
!! | AATTAAGAAGTGCTTACCTG+CGG | - | chr8_2:57569730-57569749 | None:intergenic | 35.0% |
ATAGTGAGTGATAAATGCAG+TGG | - | chr8_2:57569811-57569830 | None:intergenic | 35.0% | |
ACATATCTCTCTCTTCTACA+AGG | - | chr8_2:57570591-57570610 | None:intergenic | 35.0% | |
AAGTTCAATGGAAAAGTGGA+AGG | - | chr8_2:57570624-57570643 | None:intergenic | 35.0% | |
TTCGAAGTCTTGAAGTTGAA+AGG | + | chr8_2:57570764-57570783 | Msa1257150:CDS | 35.0% | |
!! | AGTTTGTGGATTAGATGGAA+TGG | - | chr8_2:57570794-57570813 | None:intergenic | 35.0% |
!! | TCAACAGTTTGTGGATTAGA+TGG | - | chr8_2:57570799-57570818 | None:intergenic | 35.0% |
ATCCACAAACTGTTGAAATG+TGG | + | chr8_2:57570803-57570822 | Msa1257150:CDS | 35.0% | |
TTCCACATTTCAACAGTTTG+TGG | - | chr8_2:57570808-57570827 | None:intergenic | 35.0% | |
! | TATAACCTTTTGATGTTCCC+CGG | + | chr8_2:57570886-57570905 | Msa1257150:CDS | 35.0% |
TTTGCTTAATCGTATAGCTC+CGG | - | chr8_2:57570908-57570927 | None:intergenic | 35.0% | |
ACGCACAAGACCAAATTATG+TGG | + | chr8_2:57568189-57568208 | Msa1257150:CDS | 40.0% | |
TTGAAGGGTTAGAAGCAAAC+TGG | + | chr8_2:57568248-57568267 | Msa1257150:CDS | 40.0% | |
TGAAGGGTTAGAAGCAAACT+GGG | + | chr8_2:57568249-57568268 | Msa1257150:CDS | 40.0% | |
AACTGAAACACCTCCATCAT+CGG | + | chr8_2:57568369-57568388 | Msa1257150:CDS | 40.0% | |
! | ATTTCATTCACCGATGATGG+AGG | - | chr8_2:57568382-57568401 | None:intergenic | 40.0% |
! | GCTATTTCATTCACCGATGA+TGG | - | chr8_2:57568385-57568404 | None:intergenic | 40.0% |
AATACTCGTTTCCGGAACAA+TGG | - | chr8_2:57568410-57568429 | None:intergenic | 40.0% | |
TCCGGAAACGAGTATTAATC+CGG | + | chr8_2:57568414-57568433 | Msa1257150:CDS | 40.0% | |
TCCGGATTAATACTCGTTTC+CGG | - | chr8_2:57568418-57568437 | None:intergenic | 40.0% | |
TCCATTGGCAAACTTTGTTC+CGG | - | chr8_2:57568436-57568455 | None:intergenic | 40.0% | |
!! | GATGATGGAACTGTTTCCAT+TGG | - | chr8_2:57568451-57568470 | None:intergenic | 40.0% |
!!! | TTATCGGTTTTTCCCCATCA+TGG | - | chr8_2:57568660-57568679 | None:intergenic | 40.0% |
GCAACCATACAAACGCATTT+CGG | + | chr8_2:57568774-57568793 | Msa1257150:CDS | 40.0% | |
!!! | AATCAGGATGTTTTGGAGGA+AGG | - | chr8_2:57568815-57568834 | None:intergenic | 40.0% |
AGAGGATGAACAAAAACGTC+GGG | + | chr8_2:57568849-57568868 | Msa1257150:CDS | 40.0% | |
TGTGGAAAAGGAGAAGATGA+AGG | + | chr8_2:57568916-57568935 | Msa1257150:CDS | 40.0% | |
GTGGAAAAGGAGAAGATGAA+GGG | + | chr8_2:57568917-57568936 | Msa1257150:CDS | 40.0% | |
TGGAAAAGGAGAAGATGAAG+GGG | + | chr8_2:57568918-57568937 | Msa1257150:CDS | 40.0% | |
! | CCGTTCTTGTGCTTTTATAC+AGG | + | chr8_2:57568978-57568997 | Msa1257150:CDS | 40.0% |
! | TATACTGCAGGGTTTTTCTC+AGG | + | chr8_2:57569093-57569112 | Msa1257150:intron | 40.0% |
CTGCAAGTGCAAATACTGTA+AGG | + | chr8_2:57569144-57569163 | Msa1257150:CDS | 40.0% | |
! | ACTTACACTGCTTGTTGCAT+TGG | - | chr8_2:57569210-57569229 | None:intergenic | 40.0% |
! | CAAGCAGTGTAAGTTTTCTC+CGG | + | chr8_2:57569216-57569235 | Msa1257150:intron | 40.0% |
TCATGAAAACAAAGGAGGTG+AGG | - | chr8_2:57569285-57569304 | None:intergenic | 40.0% | |
!! | ATGGGAATGAGAGGTATTCT+TGG | + | chr8_2:57569552-57569571 | Msa1257150:CDS | 40.0% |
TGCTTAGATCAAATCTGAGG+AGG | + | chr8_2:57570084-57570103 | Msa1257150:intron | 40.0% | |
TGGAAAGAGGACATACCTTA+CGG | - | chr8_2:57570174-57570193 | None:intergenic | 40.0% | |
CTGGACTCTACAGATTTCAT+GGG | + | chr8_2:57570328-57570347 | Msa1257150:intron | 40.0% | |
!! | CTCTTCTACAAGGAGTGTTA+TGG | - | chr8_2:57570581-57570600 | None:intergenic | 40.0% |
TTGCTTAATCGTATAGCTCC+GGG | - | chr8_2:57570907-57570926 | None:intergenic | 40.0% | |
GAAGCAAACTGGGAAAAACC+AGG | + | chr8_2:57568259-57568278 | Msa1257150:CDS | 45.0% | |
CGTAGACCAAGACCTGAAAT+AGG | + | chr8_2:57568307-57568326 | Msa1257150:CDS | 45.0% | |
TCCGGAACAAAGTTTGCCAA+TGG | + | chr8_2:57568432-57568451 | Msa1257150:CDS | 45.0% | |
AGTTGTCAACCATGCTAGGA+TGG | - | chr8_2:57568602-57568621 | None:intergenic | 45.0% | |
TGCAAGTTGTCAACCATGCT+AGG | - | chr8_2:57568606-57568625 | None:intergenic | 45.0% | |
AGCATGGTTGACAACTTGCA+AGG | + | chr8_2:57568606-57568625 | Msa1257150:CDS | 45.0% | |
GATGGGGAAAAACCGATAAC+CGG | + | chr8_2:57568661-57568680 | Msa1257150:CDS | 45.0% | |
GGCTCCATTGAAAATTCGAC+CGG | - | chr8_2:57568683-57568702 | None:intergenic | 45.0% | |
GTCGCAACAGCTACATAAGA+TGG | - | chr8_2:57568704-57568723 | None:intergenic | 45.0% | |
ACCATACAAACGCATTTCGG+TGG | + | chr8_2:57568777-57568796 | Msa1257150:CDS | 45.0% | |
GGAAAAGGAGAAGATGAAGG+GGG | + | chr8_2:57568919-57568938 | Msa1257150:CDS | 45.0% | |
CAAGAACGGTGATAAGTGGA+GGG | - | chr8_2:57568967-57568986 | None:intergenic | 45.0% | |
ACAAGAACGGTGATAAGTGG+AGG | - | chr8_2:57568968-57568987 | None:intergenic | 45.0% | |
AGCACAAGAACGGTGATAAG+TGG | - | chr8_2:57568971-57568990 | None:intergenic | 45.0% | |
CTCAGGAAAACGACAACCAT+TGG | + | chr8_2:57569110-57569129 | Msa1257150:CDS | 45.0% | |
! | CTGTAAGGGTGATGATGAAG+AGG | + | chr8_2:57569159-57569178 | Msa1257150:CDS | 45.0% |
! | TACACTGCTTGTTGCATTGG+CGG | - | chr8_2:57569207-57569226 | None:intergenic | 45.0% |
TGAAAACAAAGGAGGTGAGG+TGG | - | chr8_2:57569282-57569301 | None:intergenic | 45.0% | |
TTGGAGAGTCCTCCAACAAA+TGG | + | chr8_2:57569571-57569590 | Msa1257150:CDS | 45.0% | |
! | AGAGTGTTCTATACAACCGC+AGG | + | chr8_2:57569711-57569730 | Msa1257150:CDS | 45.0% |
GTATCGGGTGTCTAACAAAG+TGG | + | chr8_2:57569862-57569881 | Msa1257150:intron | 45.0% | |
TAATTGCTGCAGCTACCGTA+AGG | + | chr8_2:57570156-57570175 | Msa1257150:CDS | 45.0% | |
CCATGAAATCTGTAGAGTCC+AGG | - | chr8_2:57570330-57570349 | None:intergenic | 45.0% | |
CCTGGACTCTACAGATTTCA+TGG | + | chr8_2:57570327-57570346 | Msa1257150:intron | 45.0% | |
TGCTTAATCGTATAGCTCCG+GGG | - | chr8_2:57570906-57570925 | None:intergenic | 45.0% | |
CTGGACTTGAATGAGCCATT+CGG | + | chr8_2:57570937-57570956 | Msa1257150:CDS | 45.0% | |
TGGACTTGAATGAGCCATTC+GGG | + | chr8_2:57570938-57570957 | Msa1257150:CDS | 45.0% | |
AGAAACTCCAAGCGCAACAG+CGG | + | chr8_2:57568534-57568553 | Msa1257150:CDS | 50.0% | |
GGAAATTGATGAAGGGACCG+AGG | + | chr8_2:57568627-57568646 | Msa1257150:CDS | 50.0% | |
CTTATGTAGCTGTTGCGACG+AGG | + | chr8_2:57568705-57568724 | Msa1257150:CDS | 50.0% | |
GCGACGAGGAAATCTCTGTA+TGG | + | chr8_2:57568719-57568738 | Msa1257150:CDS | 50.0% | |
GCCACCGAAATGCGTTTGTA+TGG | - | chr8_2:57568781-57568800 | None:intergenic | 50.0% | |
AACGCATTTCGGTGGCAAAG+CGG | + | chr8_2:57568785-57568804 | Msa1257150:CDS | 50.0% | |
TGGCGGCACATGATGTCTAA+AGG | - | chr8_2:57569190-57569209 | None:intergenic | 50.0% | |
TGCAGCTGCTTGCATGTTGA+TGG | + | chr8_2:57569637-57569656 | Msa1257150:CDS | 50.0% | |
CACACATACTGGCGTCAATG+TGG | + | chr8_2:57569685-57569704 | Msa1257150:CDS | 50.0% | |
TCGGGTGTCTAACAAAGTGG+AGG | + | chr8_2:57569865-57569884 | Msa1257150:intron | 50.0% | |
GCCTTTCATTGCCACAGATG+AGG | + | chr8_2:57570368-57570387 | Msa1257150:CDS | 50.0% | |
GCCTCATCTGTGGCAATGAA+AGG | - | chr8_2:57570372-57570391 | None:intergenic | 50.0% | |
TAGCTCCGGGGAACATCAAA+AGG | - | chr8_2:57570894-57570913 | None:intergenic | 50.0% | |
GGACTTGAATGAGCCATTCG+GGG | + | chr8_2:57570939-57570958 | Msa1257150:CDS | 50.0% | |
TGGGAAAAACCAGGTCGACG+AGG | + | chr8_2:57568268-57568287 | Msa1257150:CDS | 55.0% | |
GAAACTCCAAGCGCAACAGC+GGG | + | chr8_2:57568535-57568554 | Msa1257150:CDS | 55.0% | |
AAACTCCAAGCGCAACAGCG+GGG | + | chr8_2:57568536-57568555 | Msa1257150:CDS | 55.0% | |
ACCGAGGTGCGTTACCATGA+TGG | + | chr8_2:57568643-57568662 | Msa1257150:CDS | 55.0% | |
! | CCCATCATGGTAACGCACCT+CGG | - | chr8_2:57568647-57568666 | None:intergenic | 55.0% |
CCGAGGTGCGTTACCATGAT+GGG | + | chr8_2:57568644-57568663 | Msa1257150:CDS | 55.0% | |
CGAGGTGCGTTACCATGATG+GGG | + | chr8_2:57568645-57568664 | Msa1257150:CDS | 55.0% | |
GGAGGTGAGGTGGATGAGTA+GGG | - | chr8_2:57569272-57569291 | None:intergenic | 55.0% | |
AGGAGGTGAGGTGGATGAGT+AGG | - | chr8_2:57569273-57569292 | None:intergenic | 55.0% | |
GCCACAGATGAGGCATACAG+AGG | + | chr8_2:57570378-57570397 | Msa1257150:CDS | 55.0% | |
GCCTCTGTATGCCTCATCTG+TGG | - | chr8_2:57570382-57570401 | None:intergenic | 55.0% | |
GGCTGATCAACATCCCCGAA+TGG | - | chr8_2:57570955-57570974 | None:intergenic | 55.0% | |
AACCAGGTCGACGAGGTCGA+CGG | + | chr8_2:57568275-57568294 | Msa1257150:CDS | 60.0% | |
GAAGTCCCCGCTGTTGCGCT+TGG | - | chr8_2:57568544-57568563 | None:intergenic | 65.0% | |
GACCGTCGACCTCGTCGACC+TGG | - | chr8_2:57568280-57568299 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 57568166 | 57570990 | 57568166 | ID=Msa1257150;Name=Msa1257150 |
chr8_2 | mRNA | 57568166 | 57570990 | 57568166 | ID=Msa1257150-mRNA-1;Parent=Msa1257150;Name=Msa1257150-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|1|1|1|7|0|556 |
chr8_2 | exon | 57568166 | 57568999 | 57568166 | ID=Msa1257150-mRNA-1:exon:17752;Parent=Msa1257150-mRNA-1 |
chr8_2 | exon | 57569103 | 57569223 | 57569103 | ID=Msa1257150-mRNA-1:exon:17753;Parent=Msa1257150-mRNA-1 |
chr8_2 | exon | 57569344 | 57569414 | 57569344 | ID=Msa1257150-mRNA-1:exon:17754;Parent=Msa1257150-mRNA-1 |
chr8_2 | exon | 57569506 | 57569732 | 57569506 | ID=Msa1257150-mRNA-1:exon:17755;Parent=Msa1257150-mRNA-1 |
chr8_2 | exon | 57570091 | 57570177 | 57570091 | ID=Msa1257150-mRNA-1:exon:17756;Parent=Msa1257150-mRNA-1 |
chr8_2 | exon | 57570341 | 57570440 | 57570341 | ID=Msa1257150-mRNA-1:exon:17757;Parent=Msa1257150-mRNA-1 |
chr8_2 | exon | 57570760 | 57570990 | 57570760 | ID=Msa1257150-mRNA-1:exon:17758;Parent=Msa1257150-mRNA-1 |
chr8_2 | CDS | 57568166 | 57568999 | 57568166 | ID=Msa1257150-mRNA-1:cds;Parent=Msa1257150-mRNA-1 |
chr8_2 | CDS | 57569103 | 57569223 | 57569103 | ID=Msa1257150-mRNA-1:cds;Parent=Msa1257150-mRNA-1 |
chr8_2 | CDS | 57569344 | 57569414 | 57569344 | ID=Msa1257150-mRNA-1:cds;Parent=Msa1257150-mRNA-1 |
chr8_2 | CDS | 57569506 | 57569732 | 57569506 | ID=Msa1257150-mRNA-1:cds;Parent=Msa1257150-mRNA-1 |
chr8_2 | CDS | 57570091 | 57570177 | 57570091 | ID=Msa1257150-mRNA-1:cds;Parent=Msa1257150-mRNA-1 |
chr8_2 | CDS | 57570341 | 57570440 | 57570341 | ID=Msa1257150-mRNA-1:cds;Parent=Msa1257150-mRNA-1 |
chr8_2 | CDS | 57570760 | 57570990 | 57570760 | ID=Msa1257150-mRNA-1:cds;Parent=Msa1257150-mRNA-1 |
Gene Sequence |
Protein sequence |