AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1271190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1271190 MtrunA17_Chr8g0335131 98.693 306 3 1 1 306 1 305 0.0 623
Msa1271190 MtrunA17_Chr5g0399491 58.710 310 95 11 3 304 4 288 1.09e-99 295
Msa1271190 MtrunA17_Chr4g0055851 58.249 297 90 10 1 297 3 265 3.75e-96 285
Msa1271190 MtrunA17_Chr7g0258831 64.706 187 51 4 78 260 98 273 3.26e-70 219
Msa1271190 MtrunA17_Chr1g0175651 70.625 160 28 4 103 262 129 269 1.35e-67 213
Msa1271190 MtrunA17_Chr2g0308611 74.648 142 31 2 129 270 187 323 6.33e-66 210
Msa1271190 MtrunA17_Chr4g0054421 74.809 131 27 2 129 259 115 239 5.30e-64 202
Msa1271190 MtrunA17_Chr5g0400781 65.986 147 44 2 140 281 117 262 2.93e-62 198
Msa1271190 MtrunA17_Chr1g0151971 54.913 173 64 6 91 260 84 245 4.96e-53 175
Msa1271190 MtrunA17_Chr4g0044091 63.710 124 40 1 140 258 59 182 7.71e-50 164
Msa1271190 MtrunA17_Chr2g0299031 57.031 128 48 1 132 259 75 195 5.12e-43 147
Msa1271190 MtrunA17_Chr3g0135331 64.516 124 42 2 145 268 144 265 7.16e-43 149
Msa1271190 MtrunA17_Chr4g0071411 62.281 114 40 1 148 258 90 203 9.33e-38 133
Msa1271190 MtrunA17_Chr6g0450991 43.519 108 61 0 143 250 64 171 2.40e-19 86.3
Msa1271190 MtrunA17_Chr7g0217111 47.222 108 48 2 132 235 71 173 2.51e-19 85.9
Msa1271190 MtrunA17_Chr5g0416391 47.059 102 48 1 132 233 69 164 4.73e-19 85.1
Msa1271190 MtrunA17_Chr6g0453021 40.164 122 73 0 112 233 62 183 1.47e-18 84.0
Msa1271190 MtrunA17_Chr4g0060031 45.690 116 61 1 120 233 67 182 2.43e-18 84.0
Msa1271190 MtrunA17_Chr8g0362151 45.545 101 49 1 132 232 69 163 3.11e-18 82.8
Msa1271190 MtrunA17_Chr5g0415941 48.515 101 44 2 146 239 87 186 8.10e-18 82.4
Msa1271190 MtrunA17_Chr3g0123691 36.875 160 79 5 136 285 49 196 2.68e-17 80.5
Msa1271190 MtrunA17_Chr7g0265521 36.806 144 87 3 140 280 56 198 7.86e-17 78.2
Msa1271190 MtrunA17_Chr3g0119291 37.857 140 82 2 146 281 59 197 1.32e-16 77.8
Msa1271190 MtrunA17_Chr8g0381741 37.838 148 79 4 133 273 43 184 2.80e-16 77.8
Msa1271190 MtrunA17_Chr8g0362751 46.809 94 43 1 146 232 89 182 6.92e-16 76.3
Msa1271190 MtrunA17_Chr1g0179581 45.455 88 47 1 141 228 24 110 7.48e-16 72.4
Msa1271190 MtrunA17_Chr5g0403691 42.593 108 59 2 135 240 43 149 1.20e-12 66.2
Msa1271190 MtrunA17_Chr5g0403701 41.667 108 57 2 133 240 41 142 1.45e-12 65.5
Msa1271190 MtrunA17_Chr3g0127511 41.667 96 43 2 149 234 41 133 1.82e-11 63.2
Msa1271190 MtrunA17_Chr8g0346251 33.588 131 74 2 150 280 45 162 4.78e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1271190 AT3G60390.1 59.396 298 93 9 16 303 30 309 2.20e-102 302
Msa1271190 AT5G47370.1 53.674 313 87 13 1 301 3 269 8.69e-90 269
Msa1271190 AT2G44910.1 55.183 328 111 12 1 304 1 316 9.07e-88 265
Msa1271190 AT4G17460.1 52.769 307 98 11 1 299 3 270 4.42e-85 257
Msa1271190 AT4G16780.1 55.082 305 88 9 1 296 2 266 2.52e-83 253
Msa1271190 AT5G06710.1 66.138 189 49 5 90 271 134 314 7.06e-73 228
Msa1271190 AT4G37790.1 60.795 176 59 3 120 295 106 271 1.36e-65 207
Msa1271190 AT2G22800.1 75.833 120 28 1 140 259 107 225 3.78e-61 196
Msa1271190 AT2G01430.1 49.223 193 86 5 91 281 88 270 7.03e-50 167
Msa1271190 AT1G70920.1 56.028 141 48 2 130 270 59 185 3.91e-41 142
Msa1271190 AT1G70920.2 56.028 141 48 2 130 270 29 155 4.16e-41 141
Msa1271190 AT5G06710.4 59.649 114 32 4 91 197 135 241 6.72e-30 114
Msa1271190 AT1G69780.1 44.118 136 66 2 98 233 47 172 7.30e-22 93.6
Msa1271190 AT2G01430.2 53.846 91 39 2 109 197 101 190 8.08e-22 91.7
Msa1271190 AT1G26960.1 44.444 117 56 2 120 233 48 158 4.58e-19 85.1
Msa1271190 AT3G01470.1 48.387 93 41 1 146 231 68 160 1.35e-17 81.3
Msa1271190 AT5G65310.1 42.478 113 58 1 128 233 54 166 4.55e-17 80.5
Msa1271190 AT5G65310.2 42.478 113 58 1 128 233 36 148 5.88e-17 80.1
Msa1271190 AT5G15150.1 47.872 94 45 1 146 235 115 208 5.07e-16 77.4
Msa1271190 AT3G01220.1 45.745 94 47 1 146 235 87 180 2.23e-15 75.5
Msa1271190 AT5G03790.1 43.820 89 50 0 146 234 77 165 2.86e-15 74.3
Msa1271190 AT2G18550.1 43.137 102 53 1 140 241 55 151 8.71e-15 72.4
Msa1271190 AT4G40060.1 43.299 97 48 1 144 233 57 153 1.36e-14 73.2
Msa1271190 AT1G27045.4 45.833 96 45 1 146 234 68 163 2.75e-14 71.6
Msa1271190 AT1G27045.1 56.061 66 29 0 146 211 68 133 3.75e-14 70.9
Msa1271190 AT2G22430.1 45.833 96 48 1 144 235 60 155 5.16e-14 71.6
Msa1271190 AT1G27045.5 56.061 66 29 0 146 211 25 90 5.43e-14 69.7
Msa1271190 AT1G27045.3 56.061 66 29 0 146 211 25 90 5.43e-14 69.7
Msa1271190 AT1G27045.2 56.061 66 29 0 146 211 17 82 6.39e-14 69.3
Msa1271190 AT2G36610.1 36.937 111 58 2 136 234 57 167 2.11e-13 67.8
Msa1271190 AT2G46680.1 42.105 95 51 1 149 239 35 129 4.98e-13 68.2
Msa1271190 AT2G46680.2 42.045 88 51 0 149 236 35 122 6.49e-13 67.8
Msa1271190 AT4G36740.2 40.385 104 55 2 138 241 50 146 6.71e-13 67.0
Msa1271190 AT4G36740.1 40.385 104 55 2 138 241 49 145 7.07e-13 67.0
Msa1271190 AT5G03790.2 41.758 91 53 0 146 236 77 167 2.10e-12 65.5
Msa1271190 AT3G61890.1 33.333 126 84 0 149 274 33 158 1.73e-11 63.5
Msa1271190 AT5G06710.2 45.000 100 41 4 91 183 135 227 2.64e-11 62.8
Msa1271190 AT5G06710.3 45.000 100 41 4 91 183 135 227 2.64e-11 62.8

Find 145 sgRNAs with CRISPR-Local

Find 243 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATGGTCGGGAACGATTT+TGG 0.169525 8_3:-4658531 None:intergenic
TTATAGTATCAATATGATTT+TGG 0.193608 8_3:+4655879 None:intergenic
CAGAACATTAGGTGGGTTTA+TGG 0.198686 8_3:-4656036 None:intergenic
AAGAAGGGAAGGACAGAAAA+TGG 0.263745 8_3:-4656101 None:intergenic
TAACCTTGAAAGGATGAAAA+AGG 0.268132 8_3:+4658891 Msa1271190:three_prime_UTR
GAAAGATGATGAATTTAGTT+TGG 0.275241 8_3:+4656201 Msa1271190:CDS
GAAAACACATACCATGAAAA+TGG 0.282242 8_3:-4656351 None:intergenic
ACTTTAGAGTGTGTAAAGTT+TGG 0.319254 8_3:+4658811 Msa1271190:three_prime_UTR
CTTAAATATATATTTCTTCA+TGG 0.324327 8_3:+4658927 Msa1271190:three_prime_UTR
CACTTCAGTTTGCTTCAACT+TGG 0.366945 8_3:-4658224 None:intergenic
TTAAGCTTGAGTTTAGGATT+TGG 0.367633 8_3:+4656226 Msa1271190:CDS
AAAGATGATGAATTTAGTTT+GGG 0.373079 8_3:+4656202 Msa1271190:CDS
TTTGTGCATGTTTGTTATCA+AGG 0.393449 8_3:-4658693 None:intergenic
CTTTGGTTTGTAACCGTTTG+AGG 0.393528 8_3:-4656307 None:intergenic
TGCGGCGGCCGTCGCCGCCA+TGG 0.395192 8_3:-4656932 None:intergenic
AAATATATATTTAAGAGATT+CGG 0.398884 8_3:-4658919 None:intergenic
GCTAGACAAATGTGTATGTT+TGG 0.400019 8_3:+4658605 Msa1271190:three_prime_UTR
AAAAGGAAGTGCAAGAGCTT+AGG 0.411234 8_3:+4658305 Msa1271190:CDS
AGTGTATGTCGCAGAACATT+AGG 0.412326 8_3:-4656047 None:intergenic
TTGGGTTTAAGCTTGAGTTT+AGG 0.412484 8_3:+4656220 Msa1271190:CDS
GGCCAACACCTGTCAACCCT+TGG 0.414534 8_3:+4658494 Msa1271190:CDS
TATAAGAAATGGAGGAAAGA+TGG 0.424033 8_3:-4656006 None:intergenic
CTATATATAGATACATACTA+TGG 0.429771 8_3:-4655981 None:intergenic
GAGTCACCTTCAAAGGAGTT+TGG 0.430355 8_3:-4656270 None:intergenic
AACCACACCTCCACTTGTCT+TGG 0.434860 8_3:-4657536 None:intergenic
TGGATGGGGTTGGGCAGCTA+TGG 0.436143 8_3:-4656081 None:intergenic
TCGCTCTAGATCCTAGTAGT+AGG 0.437773 8_3:+4658557 Msa1271190:three_prime_UTR
GACAGAAAATGGATGGGGTT+GGG 0.438980 8_3:-4656090 None:intergenic
AAAGGAAGTGCAAGAGCTTA+GGG 0.439484 8_3:+4658306 Msa1271190:CDS
AGTTATTGAAGGAAACCCTT+TGG 0.441554 8_3:-4656324 None:intergenic
GGTGTTGGCCGTTGAACACT+TGG 0.442745 8_3:-4658481 None:intergenic
CAACAACCAAACTCCTTTGA+AGG 0.444372 8_3:+4656264 Msa1271190:CDS
TCTGCTTCAGCCAACCCGTC+AGG 0.450595 8_3:+4658457 Msa1271190:CDS
GTTGTTGGAAGAAACTTTCA+AGG 0.454317 8_3:+4657170 Msa1271190:CDS
ATGGAGAACAGTATAAGAAA+TGG 0.455065 8_3:-4656017 None:intergenic
TTAAATATATATTTCTTCAT+GGG 0.463540 8_3:+4658928 Msa1271190:three_prime_UTR
AGCAGCAGCAGCTGCTGATG+AGG 0.465286 8_3:-4658428 None:intergenic
TCATACCACTTGGTGAGAAA+AGG 0.465480 8_3:+4658956 Msa1271190:three_prime_UTR
TTTAATTTATTAACCTTGAA+AGG 0.467349 8_3:+4658881 Msa1271190:three_prime_UTR
AAGTTTGGAAATGTTAAAGT+AGG 0.470317 8_3:+4658826 Msa1271190:three_prime_UTR
GCGGCCGTCGCCGCCATGGA+TGG 0.472789 8_3:-4656928 None:intergenic
GCCCAAGGGTTGACAGGTGT+TGG 0.475640 8_3:-4658496 None:intergenic
TTTGCACTTTACTTTAGTGT+TGG 0.478083 8_3:+4658732 Msa1271190:three_prime_UTR
GCCAACACCTGTCAACCCTT+GGG 0.479663 8_3:+4658495 Msa1271190:CDS
CGCTCTAGATCCTAGTAGTA+GGG 0.480212 8_3:+4658558 Msa1271190:three_prime_UTR
GATGATGACGGCGGAGGTTG+CGG 0.480696 8_3:+4657093 Msa1271190:CDS
AGACTCTAACTGATGAGAAT+AGG 0.482124 8_3:+4658275 Msa1271190:CDS
AACACTTGGGCCTGACGGGT+TGG 0.484425 8_3:-4658467 None:intergenic
ATGCTTGACACGGTGCTGTT+CGG 0.485523 8_3:-4656982 None:intergenic
GGCGGAGGTTGCGGTGGCGA+CGG 0.488707 8_3:+4657102 Msa1271190:CDS
CGTTGAACACTTGGGCCTGA+CGG 0.491085 8_3:-4658472 None:intergenic
TTGAGTAAAACATGTTCTCT+AGG 0.495487 8_3:-4658789 None:intergenic
GGTTCATGTTCTCGCGGCGG+CGG 0.496150 8_3:+4657063 Msa1271190:CDS
AGCACCGTGTCAAGCATTAG+TGG 0.497591 8_3:+4656988 Msa1271190:CDS
AGTAGTAGGGTAATGTAGGC+AGG 0.497613 8_3:+4658571 Msa1271190:three_prime_UTR
GAAGGAACAGTCAATGTTGT+TGG 0.498061 8_3:+4657155 Msa1271190:CDS
TCTAGGCCCAAAATAAGAAA+AGG 0.498219 8_3:-4658772 None:intergenic
ATTGCCGCCCAAGGGTTGAC+AGG 0.503094 8_3:-4658502 None:intergenic
AATGTGTATGTTTGGATTCG+CGG 0.503128 8_3:+4658613 Msa1271190:three_prime_UTR
TTCATTTGCATGTAGAGTTG+TGG 0.503551 8_3:-4658343 None:intergenic
TCATTTCTCCGCGGAATAGA+CGG 0.512734 8_3:+4656892 Msa1271190:CDS
TGAAAACGACGCCGTCGAAA+GGG 0.514530 8_3:+4657041 Msa1271190:CDS
TGGATAGACATTGCCGCCCA+AGG 0.515878 8_3:-4658511 None:intergenic
GGACAGAAAATGGATGGGGT+TGG 0.520522 8_3:-4656091 None:intergenic
AAAATGGAACAAGTTATTGA+AGG 0.520682 8_3:-4656335 None:intergenic
AGGGAAGGACAGAAAATGGA+TGG 0.521815 8_3:-4656097 None:intergenic
TCCTAGTAGTAGGGTAATGT+AGG 0.522460 8_3:+4658567 Msa1271190:three_prime_UTR
AGGAGCGAAAGAGAAGGAAA+CGG 0.525139 8_3:+4657015 Msa1271190:CDS
CATGCACAAGCCTCCTCAAA+CGG 0.530251 8_3:+4656294 Msa1271190:CDS
GGAGCATAATACTCTGAATC+CGG 0.531921 8_3:+4657191 Msa1271190:CDS
TATGGAGAAGAGAAATGAAA+GGG 0.532221 8_3:-4655963 None:intergenic
GGAAAGAGGAGCGAAAGAGA+AGG 0.537565 8_3:+4657009 Msa1271190:CDS
TACCACTTGGTGAGAAAAGG+TGG 0.538382 8_3:+4658959 Msa1271190:three_prime_UTR
GCCGCATTCGACGATGAAAA+CGG 0.539309 8_3:+4656949 Msa1271190:CDS
TGCATGTGAGTCACCTTCAA+AGG 0.543980 8_3:-4656277 None:intergenic
ATAAGAAATGGAGGAAAGAT+GGG 0.544830 8_3:-4656005 None:intergenic
ACTACCATCCATGGCGGCGA+CGG 0.547385 8_3:+4656924 Msa1271190:CDS
CAACACTCCACTACCATCCA+TGG 0.551656 8_3:+4656915 Msa1271190:CDS
TAGAGCGAATACTCATGGTC+GGG 0.553208 8_3:-4658542 None:intergenic
CTCTAACTGATGAGAATAGG+AGG 0.555223 8_3:+4658278 Msa1271190:CDS
AGGTGTGGTTTCAAAACAGA+AGG 0.557390 8_3:+4657549 Msa1271190:CDS
TCAGAAACAAAAGCAAGCAT+TGG 0.557840 8_3:+4657493 Msa1271190:intron
GTCGCCGCCATGGATGGTAG+TGG 0.558543 8_3:-4656922 None:intergenic
GAGAACAGTATAAGAAATGG+AGG 0.560086 8_3:-4656014 None:intergenic
ATGGGATTTGTCATACCACT+TGG 0.564378 8_3:+4658946 Msa1271190:three_prime_UTR
TGAGAATAGGAGGTTGCAAA+AGG 0.565911 8_3:+4658288 Msa1271190:CDS
TTCCCATGAGGGGATAGTTG+TGG 0.568556 8_3:+4659022 Msa1271190:three_prime_UTR
GCCTACATTACCCTACTACT+AGG 0.568684 8_3:-4658568 None:intergenic
CTCAAACGGTTACAAACCAA+AGG 0.569424 8_3:+4656308 Msa1271190:CDS
GGATCTAGAGCGAATACTCA+TGG 0.570023 8_3:-4658547 None:intergenic
TGACGGGTTGGCTGAAGCAG+AGG 0.570759 8_3:-4658455 None:intergenic
ATGAAAACGACGCCGTCGAA+AGG 0.571630 8_3:+4657040 Msa1271190:CDS
GGATAGACATTGCCGCCCAA+GGG 0.571951 8_3:-4658510 None:intergenic
GGGCACATTGTAAGAGTGGT+GGG 0.573198 8_3:-4658370 None:intergenic
CAAGTTGAAGCAAACTGAAG+TGG 0.573772 8_3:+4658225 Msa1271190:CDS
CTAGAGCGAATACTCATGGT+CGG 0.575049 8_3:-4658543 None:intergenic
AGACCACAACTATCCCCTCA+TGG 0.580514 8_3:-4659025 None:intergenic
CTATGGAGAAGAGAAATGAA+AGG 0.581254 8_3:-4655964 None:intergenic
GGGAAGGACAGAAAATGGAT+GGG 0.582014 8_3:-4656096 None:intergenic
TGGGCAGCTATGGACTATGA+TGG 0.585257 8_3:-4656071 None:intergenic
TTTGTGCAAGATTGAAGAGG+GGG 0.586874 8_3:+4658985 Msa1271190:three_prime_UTR
GACGGGTTGGCTGAAGCAGA+GGG 0.587441 8_3:-4658454 None:intergenic
CGAAGGGCACATTGTAAGAG+TGG 0.588926 8_3:-4658374 None:intergenic
TGTCAAGCATTAGTGGAAAG+AGG 0.589483 8_3:+4656995 Msa1271190:CDS
AACACCTGTCAACCCTTGGG+CGG 0.591322 8_3:+4658498 Msa1271190:CDS
TCAAACGGTTACAAACCAAA+GGG 0.592760 8_3:+4656309 Msa1271190:CDS
ACATTGTAAGAGTGGTGGGA+GGG 0.595529 8_3:-4658366 None:intergenic
GGAAGGACAGAAAATGGATG+GGG 0.596500 8_3:-4656095 None:intergenic
GTGTTGGCCGTTGAACACTT+GGG 0.596735 8_3:-4658480 None:intergenic
ACGGCGACACGCTCGCACGA+AGG 0.599222 8_3:-4658391 None:intergenic
AGCCAAGACAAGTGGAGGTG+TGG 0.599876 8_3:+4657534 Msa1271190:CDS
TGGTTTGTAACCGTTTGAGG+AGG 0.599884 8_3:-4656304 None:intergenic
AATTAAGGGGATTCCCATGA+GGG 0.600356 8_3:+4659011 Msa1271190:three_prime_UTR
AGGGCACATTGTAAGAGTGG+TGG 0.603305 8_3:-4658371 None:intergenic
CGTCAGGCCCAAGTGTTCAA+CGG 0.606766 8_3:+4658473 Msa1271190:CDS
AGAACATGAACCCCTTTCGA+CGG 0.611067 8_3:-4657052 None:intergenic
CACATTGTAAGAGTGGTGGG+AGG 0.613092 8_3:-4658367 None:intergenic
GAAAACGACGCCGTCGAAAG+GGG 0.619048 8_3:+4657042 Msa1271190:CDS
CTTTCCACTAATGCTTGACA+CGG 0.619897 8_3:-4656992 None:intergenic
GTGGCGACGGTGATTCGTCA+AGG 0.623006 8_3:+4657115 Msa1271190:CDS
AAGGTATTAAGAAGAAGGGA+AGG 0.624463 8_3:-4656112 None:intergenic
GAATCTGAAGCCAAGACAAG+TGG 0.625066 8_3:+4657526 Msa1271190:CDS
GTATGTCGCAGAACATTAGG+TGG 0.625201 8_3:-4656044 None:intergenic
GACCACAACTATCCCCTCAT+GGG 0.626017 8_3:-4659024 None:intergenic
GTAGTAGGGTAATGTAGGCA+GGG 0.627228 8_3:+4658572 Msa1271190:three_prime_UTR
GATGACGGCGGAGGTTGCGG+TGG 0.629392 8_3:+4657096 Msa1271190:CDS
GAAGAAGCTGAGGTTGTCGA+AGG 0.629748 8_3:+4657137 Msa1271190:CDS
AGTGATGATGATGACGGCGG+AGG 0.634764 8_3:+4657087 Msa1271190:CDS
TCTGAAGCCAAGACAAGTGG+AGG 0.635230 8_3:+4657529 Msa1271190:CDS
TATGTCGCAGAACATTAGGT+GGG 0.644403 8_3:-4656043 None:intergenic
AAATTAAGGGGATTCCCATG+AGG 0.647377 8_3:+4659010 Msa1271190:three_prime_UTR
ACCACTTGGTGAGAAAAGGT+GGG 0.656822 8_3:+4658960 Msa1271190:three_prime_UTR
ATTCGTCAAGGAAGAAGCTG+AGG 0.662832 8_3:+4657127 Msa1271190:CDS
GAAAGGGGTTCATGTTCTCG+CGG 0.668678 8_3:+4657057 Msa1271190:CDS
GGCGGAAGTGATGATGATGA+CGG 0.668902 8_3:+4657081 Msa1271190:CDS
GGGTTGGCTGAAGCAGAGGG+AGG 0.674475 8_3:-4658451 None:intergenic
GGTTTCAAAACAGAAGGGCA+AGG 0.677211 8_3:+4657555 Msa1271190:CDS
CAGATCTAAGCACAGAAACG+AGG 0.678976 8_3:+4656869 Msa1271190:intron
TGAGGACGATGCAGATGACA+CGG 0.688825 8_3:-4658410 None:intergenic
GGTGTGGTTTCAAAACAGAA+GGG 0.691196 8_3:+4657550 Msa1271190:CDS
AGGGGTTCATGTTCTCGCGG+CGG 0.699189 8_3:+4657060 Msa1271190:CDS
CACTCCACTACCATCCATGG+CGG 0.704044 8_3:+4656918 Msa1271190:CDS
GGAAGTGATGATGATGACGG+CGG 0.716365 8_3:+4657084 Msa1271190:CDS
ATTAAGGGGATTCCCATGAG+GGG 0.717702 8_3:+4659012 Msa1271190:three_prime_UTR
GAAACGAGGTCATTTCTCCG+CGG 0.771153 8_3:+4656883 Msa1271190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATAAAAAAAAAAAAA+TGG - chr8_3:4656628-4656647 None:intergenic 0.0%
!!! TCATTTTTGTTTTTTTTTTT+GGG + chr8_3:4656534-4656553 Msa1271190:intron 10.0%
!! AAATATATATTTAAGAGATT+CGG - chr8_3:4658922-4658941 None:intergenic 10.0%
!! TTAAATATATATTTCTTCAT+GGG + chr8_3:4658928-4658947 Msa1271190:three_prime_UTR 10.0%
!! AAAAGAAAAAAGAAACAAAA+AGG - chr8_3:4656134-4656153 None:intergenic 15.0%
!! GAAAAAAAAAATTTGAAGAA+AGG - chr8_3:4656399-4656418 None:intergenic 15.0%
!!! ATTTCTCTTCATATTTTTTA+GGG + chr8_3:4656490-4656509 Msa1271190:intron 15.0%
!! AAAAAACAAAAATGAGAAAT+GGG - chr8_3:4656529-4656548 None:intergenic 15.0%
!! AAAAAAACAAAAATGAGAAA+TGG - chr8_3:4656530-4656549 None:intergenic 15.0%
!!! CTCATTTTTGTTTTTTTTTT+TGG + chr8_3:4656533-4656552 Msa1271190:intron 15.0%
!!! TTTTTCATTATATGATTCAA+GGG - chr8_3:4656601-4656620 None:intergenic 15.0%
!! ATCAGAAAGTAAATTAAAAT+GGG - chr8_3:4656743-4656762 None:intergenic 15.0%
!! AATCAGAAAGTAAATTAAAA+TGG - chr8_3:4656744-4656763 None:intergenic 15.0%
!! GTAATTATCAACTAAATTTA+AGG - chr8_3:4656811-4656830 None:intergenic 15.0%
!!! TTGTTTTTATTATTGTTTTG+AGG + chr8_3:4657336-4657355 Msa1271190:intron 15.0%
!!! GTCATTTTTGAATATTAATT+TGG + chr8_3:4657607-4657626 Msa1271190:intron 15.0%
!!! TTATTATAATCTTTTGATGA+TGG + chr8_3:4657967-4657986 Msa1271190:intron 15.0%
!!! TTTAATTTATTAACCTTGAA+AGG + chr8_3:4658881-4658900 Msa1271190:three_prime_UTR 15.0%
!! CTTAAATATATATTTCTTCA+TGG + chr8_3:4658927-4658946 Msa1271190:three_prime_UTR 15.0%
!! CTATATATAGATACATACTA+TGG - chr8_3:4655984-4656003 None:intergenic 20.0%
!! ATTCAAACAAGAGAAAAAAA+TGG + chr8_3:4656174-4656193 Msa1271190:exon 20.0%
!! TTCAAACAAGAGAAAAAAAT+GGG + chr8_3:4656175-4656194 Msa1271190:exon 20.0%
!!! AAAGATGATGAATTTAGTTT+GGG + chr8_3:4656202-4656221 Msa1271190:CDS 20.0%
!! GGAATTAAAAATGAAAAGAA+TGG - chr8_3:4656421-4656440 None:intergenic 20.0%
!!! GATTTCTCTTCATATTTTTT+AGG + chr8_3:4656489-4656508 Msa1271190:intron 20.0%
!! AAAAACAAAAATGAGAAATG+GGG - chr8_3:4656528-4656547 None:intergenic 20.0%
!!! GTTTTTCATTATATGATTCA+AGG - chr8_3:4656602-4656621 None:intergenic 20.0%
!!! TGTAATTCAGTTTTATGTTA+AGG + chr8_3:4657237-4657256 Msa1271190:intron 20.0%
!!! GTAATTCAGTTTTATGTTAA+GGG + chr8_3:4657238-4657257 Msa1271190:intron 20.0%
!!! TATATTTGGAAGTGTAAATT+TGG + chr8_3:4657293-4657312 Msa1271190:intron 20.0%
!!! AGGTTGTCTTTTTTTTTTTT+TGG + chr8_3:4657367-4657386 Msa1271190:intron 20.0%
!!! TTTTTTTGGTTGAGTAATTA+AGG + chr8_3:4657381-4657400 Msa1271190:intron 20.0%
!! TTTATGAGGAGTAAAAAATT+AGG + chr8_3:4657858-4657877 Msa1271190:intron 20.0%
!! TGTAAACTCTTAAAATTGAA+AGG - chr8_3:4658015-4658034 None:intergenic 20.0%
!!! CAAAAAGGTATTAAGAAGAA+GGG - chr8_3:4656119-4656138 None:intergenic 25.0%
!!! ACAAAAAGGTATTAAGAAGA+AGG - chr8_3:4656120-4656139 None:intergenic 25.0%
!!! TTGTTTGAATTTTGAAGAAG+GGG - chr8_3:4656164-4656183 None:intergenic 25.0%
!!! CTTGTTTGAATTTTGAAGAA+GGG - chr8_3:4656165-4656184 None:intergenic 25.0%
!!! TCTTGTTTGAATTTTGAAGA+AGG - chr8_3:4656166-4656185 None:intergenic 25.0%
! GAAAGATGATGAATTTAGTT+TGG + chr8_3:4656201-4656220 Msa1271190:CDS 25.0%
! AAAATGGAACAAGTTATTGA+AGG - chr8_3:4656338-4656357 None:intergenic 25.0%
!!! AATAACTTGTTCCATTTTCA+TGG + chr8_3:4656340-4656359 Msa1271190:CDS 25.0%
! GAAAGGAAACATAGAAATTT+AGG - chr8_3:4656382-4656401 None:intergenic 25.0%
! AAAATTAACAATGCATCAAG+AGG - chr8_3:4656442-4656461 None:intergenic 25.0%
! TATGAAGAGAAATCAAGAAT+GGG - chr8_3:4656483-4656502 None:intergenic 25.0%
! ATATGAAGAGAAATCAAGAA+TGG - chr8_3:4656484-4656503 None:intergenic 25.0%
!!! TGTTTTTTTTTTTGGGTGAA+TGG + chr8_3:4656541-4656560 Msa1271190:intron 25.0%
! TTCATCTCATCAAAGAAAAT+GGG - chr8_3:4656698-4656717 None:intergenic 25.0%
! ATTCATCTCATCAAAGAAAA+TGG - chr8_3:4656699-4656718 None:intergenic 25.0%
!! TTTTATGTTAAGGGCTTATT+TGG + chr8_3:4657247-4657266 Msa1271190:intron 25.0%
!! CTTATTTGGAATTTCATTAC+AGG + chr8_3:4657261-4657280 Msa1271190:intron 25.0%
! GAATTTCATTACAGGATAAA+AGG + chr8_3:4657269-4657288 Msa1271190:intron 25.0%
! ACTGTTTGGATCATATTAAT+TGG + chr8_3:4657728-4657747 Msa1271190:intron 25.0%
!! AACACAACTTAACTTTTATG+AGG + chr8_3:4657844-4657863 Msa1271190:intron 25.0%
!!! ATAATCTTTTGATGATGGAT+TGG + chr8_3:4657972-4657991 Msa1271190:intron 25.0%
!!! TAATCTTTTGATGATGGATT+GGG + chr8_3:4657973-4657992 Msa1271190:intron 25.0%
! AAGTTTGGAAATGTTAAAGT+AGG + chr8_3:4658826-4658845 Msa1271190:three_prime_UTR 25.0%
TATGGAGAAGAGAAATGAAA+GGG - chr8_3:4655966-4655985 None:intergenic 30.0%
ATAAGAAATGGAGGAAAGAT+GGG - chr8_3:4656008-4656027 None:intergenic 30.0%
TATAAGAAATGGAGGAAAGA+TGG - chr8_3:4656009-4656028 None:intergenic 30.0%
ATGGAGAACAGTATAAGAAA+TGG - chr8_3:4656020-4656039 None:intergenic 30.0%
!! TGTTTGAATTTTGAAGAAGG+GGG - chr8_3:4656163-4656182 None:intergenic 30.0%
! TTAAGCTTGAGTTTAGGATT+TGG + chr8_3:4656226-4656245 Msa1271190:CDS 30.0%
GAAAACACATACCATGAAAA+TGG - chr8_3:4656354-4656373 None:intergenic 30.0%
!!! TTTTTTTTGGGTGAATGGTA+AGG + chr8_3:4656546-4656565 Msa1271190:intron 30.0%
!!! TTTTTTTGGGTGAATGGTAA+GGG + chr8_3:4656547-4656566 Msa1271190:intron 30.0%
ACAGGATAAAAGGCTATATT+TGG + chr8_3:4657279-4657298 Msa1271190:intron 30.0%
!!! ATTGTTTTGAGGTTATTCTG+AGG + chr8_3:4657347-4657366 Msa1271190:intron 30.0%
TAAACATTGTTGTGATGTTG+TGG + chr8_3:4657641-4657660 Msa1271190:intron 30.0%
TAATATGATCCAAACAGTGT+GGG - chr8_3:4657726-4657745 None:intergenic 30.0%
TTAATATGATCCAAACAGTG+TGG - chr8_3:4657727-4657746 None:intergenic 30.0%
GTTGTATTGTAACAAGTATG+TGG + chr8_3:4657898-4657917 Msa1271190:intron 30.0%
! TTGTAGCTTTTGTAGAATCA+TGG + chr8_3:4658641-4658660 Msa1271190:three_prime_UTR 30.0%
!! TTTGTGCATGTTTGTTATCA+AGG - chr8_3:4658696-4658715 None:intergenic 30.0%
TTTGCACTTTACTTTAGTGT+TGG + chr8_3:4658732-4658751 Msa1271190:three_prime_UTR 30.0%
!! AGTCTAGCCTTTTCTTATTT+TGG + chr8_3:4658765-4658784 Msa1271190:three_prime_UTR 30.0%
!!! GTCTAGCCTTTTCTTATTTT+GGG + chr8_3:4658766-4658785 Msa1271190:three_prime_UTR 30.0%
TTGAGTAAAACATGTTCTCT+AGG - chr8_3:4658792-4658811 None:intergenic 30.0%
!! ACTTTAGAGTGTGTAAAGTT+TGG + chr8_3:4658811-4658830 Msa1271190:three_prime_UTR 30.0%
TAACCTTGAAAGGATGAAAA+AGG + chr8_3:4658891-4658910 Msa1271190:three_prime_UTR 30.0%
! ATTTTGTGCAAGATTGAAGA+GGG + chr8_3:4658983-4659002 Msa1271190:three_prime_UTR 30.0%
CTATGGAGAAGAGAAATGAA+AGG - chr8_3:4655967-4655986 None:intergenic 35.0%
GAGAACAGTATAAGAAATGG+AGG - chr8_3:4656017-4656036 None:intergenic 35.0%
! AAGGTATTAAGAAGAAGGGA+AGG - chr8_3:4656115-4656134 None:intergenic 35.0%
TTGGGTTTAAGCTTGAGTTT+AGG + chr8_3:4656220-4656239 Msa1271190:CDS 35.0%
TCAAACGGTTACAAACCAAA+GGG + chr8_3:4656309-4656328 Msa1271190:CDS 35.0%
AGTTATTGAAGGAAACCCTT+TGG - chr8_3:4656327-4656346 None:intergenic 35.0%
!!! TTTTTTGGGTGAATGGTAAG+GGG + chr8_3:4656548-4656567 Msa1271190:intron 35.0%
GTTATACCAAAGATGAGAAG+GGG - chr8_3:4656579-4656598 None:intergenic 35.0%
GGTTATACCAAAGATGAGAA+GGG - chr8_3:4656580-4656599 None:intergenic 35.0%
!! TTTGCATGTGAGTGTTTTAG+TGG - chr8_3:4656841-4656860 None:intergenic 35.0%
GTTGTTGGAAGAAACTTTCA+AGG + chr8_3:4657170-4657189 Msa1271190:CDS 35.0%
TCAGAAACAAAAGCAAGCAT+TGG + chr8_3:4657493-4657512 Msa1271190:intron 35.0%
AATATGATCCAAACAGTGTG+GGG - chr8_3:4657725-4657744 None:intergenic 35.0%
CATGTACAAACCAATGTATG+TGG + chr8_3:4658094-4658113 Msa1271190:intron 35.0%
CACAACAAATCCACATACAT+TGG - chr8_3:4658107-4658126 None:intergenic 35.0%
TATTGTGTTCCATGCTGTTA+TGG + chr8_3:4658154-4658173 Msa1271190:intron 35.0%
! TTTTTCCTTCCATAACAGCA+TGG - chr8_3:4658166-4658185 None:intergenic 35.0%
AAAATGTGACATGAGTGCTT+TGG + chr8_3:4658186-4658205 Msa1271190:intron 35.0%
AGACTCTAACTGATGAGAAT+AGG + chr8_3:4658275-4658294 Msa1271190:CDS 35.0%
TTCATTTGCATGTAGAGTTG+TGG - chr8_3:4658346-4658365 None:intergenic 35.0%
GCTAGACAAATGTGTATGTT+TGG + chr8_3:4658605-4658624 Msa1271190:three_prime_UTR 35.0%
AATGTGTATGTTTGGATTCG+CGG + chr8_3:4658613-4658632 Msa1271190:three_prime_UTR 35.0%
TCTAGGCCCAAAATAAGAAA+AGG - chr8_3:4658775-4658794 None:intergenic 35.0%
!! TCTCCTTTTTCATCCTTTCA+AGG - chr8_3:4658897-4658916 None:intergenic 35.0%
! GATTTTGTGCAAGATTGAAG+AGG + chr8_3:4658982-4659001 Msa1271190:three_prime_UTR 35.0%
! TTTTGTGCAAGATTGAAGAG+GGG + chr8_3:4658984-4659003 Msa1271190:three_prime_UTR 35.0%
! CAGAACATTAGGTGGGTTTA+TGG - chr8_3:4656039-4656058 None:intergenic 40.0%
TATGTCGCAGAACATTAGGT+GGG - chr8_3:4656046-4656065 None:intergenic 40.0%
AGTGTATGTCGCAGAACATT+AGG - chr8_3:4656050-4656069 None:intergenic 40.0%
AAGAAGGGAAGGACAGAAAA+TGG - chr8_3:4656104-4656123 None:intergenic 40.0%
CAACAACCAAACTCCTTTGA+AGG + chr8_3:4656264-4656283 Msa1271190:CDS 40.0%
!! CTTTGGTTTGTAACCGTTTG+AGG - chr8_3:4656310-4656329 None:intergenic 40.0%
CTCAAACGGTTACAAACCAA+AGG + chr8_3:4656308-4656327 Msa1271190:CDS 40.0%
GGGTTATACCAAAGATGAGA+AGG - chr8_3:4656581-4656600 None:intergenic 40.0%
CTTTCCACTAATGCTTGACA+CGG - chr8_3:4656995-4657014 None:intergenic 40.0%
TGTCAAGCATTAGTGGAAAG+AGG + chr8_3:4656995-4657014 Msa1271190:CDS 40.0%
GAAGGAACAGTCAATGTTGT+TGG + chr8_3:4657155-4657174 Msa1271190:CDS 40.0%
GGAGCATAATACTCTGAATC+CGG + chr8_3:4657191-4657210 Msa1271190:CDS 40.0%
TACCACTACAACAAACTCAC+CGG - chr8_3:4657213-4657232 None:intergenic 40.0%
AGGTGTGGTTTCAAAACAGA+AGG + chr8_3:4657549-4657568 Msa1271190:CDS 40.0%
GGTGTGGTTTCAAAACAGAA+GGG + chr8_3:4657550-4657569 Msa1271190:CDS 40.0%
ACAGTGTGGGGTATATAGTA+TGG - chr8_3:4657713-4657732 None:intergenic 40.0%
ACTATATACCCCACACTGTT+TGG + chr8_3:4657714-4657733 Msa1271190:intron 40.0%
TGTGGCAACATGAGTATGTT+AGG + chr8_3:4657916-4657935 Msa1271190:intron 40.0%
GTGGCAACATGAGTATGTTA+GGG + chr8_3:4657917-4657936 Msa1271190:intron 40.0%
! CTTTTGTGCATGTAGTAGGT+GGG - chr8_3:4657943-4657962 None:intergenic 40.0%
! CATGCTTTTGTGCATGTAGT+AGG - chr8_3:4657947-4657966 None:intergenic 40.0%
!!! CTTTTGATGATGGATTGGGA+AGG + chr8_3:4657977-4657996 Msa1271190:intron 40.0%
! CACTTCAGTTTGCTTCAACT+TGG - chr8_3:4658227-4658246 None:intergenic 40.0%
! CAAGTTGAAGCAAACTGAAG+TGG + chr8_3:4658225-4658244 Msa1271190:CDS 40.0%
CTCTAACTGATGAGAATAGG+AGG + chr8_3:4658278-4658297 Msa1271190:CDS 40.0%
TGAGAATAGGAGGTTGCAAA+AGG + chr8_3:4658288-4658307 Msa1271190:CDS 40.0%
! AAAAGGAAGTGCAAGAGCTT+AGG + chr8_3:4658305-4658324 Msa1271190:CDS 40.0%
! AAAGGAAGTGCAAGAGCTTA+GGG + chr8_3:4658306-4658325 Msa1271190:CDS 40.0%
TCCTAGTAGTAGGGTAATGT+AGG + chr8_3:4658567-4658586 Msa1271190:three_prime_UTR 40.0%
ATGGGATTTGTCATACCACT+TGG + chr8_3:4658946-4658965 Msa1271190:three_prime_UTR 40.0%
! TCATACCACTTGGTGAGAAA+AGG + chr8_3:4658956-4658975 Msa1271190:three_prime_UTR 40.0%
TTTGTGCAAGATTGAAGAGG+GGG + chr8_3:4658985-4659004 Msa1271190:three_prime_UTR 40.0%
TTGAAGAGGGGGACAAATTA+AGG + chr8_3:4658996-4659015 Msa1271190:three_prime_UTR 40.0%
TGAAGAGGGGGACAAATTAA+GGG + chr8_3:4658997-4659016 Msa1271190:three_prime_UTR 40.0%
AAATTAAGGGGATTCCCATG+AGG + chr8_3:4659010-4659029 Msa1271190:three_prime_UTR 40.0%
AATTAAGGGGATTCCCATGA+GGG + chr8_3:4659011-4659030 Msa1271190:three_prime_UTR 40.0%
GTATGTCGCAGAACATTAGG+TGG - chr8_3:4656047-4656066 None:intergenic 45.0%
GACAGAAAATGGATGGGGTT+GGG - chr8_3:4656093-4656112 None:intergenic 45.0%
GGAAGGACAGAAAATGGATG+GGG - chr8_3:4656098-4656117 None:intergenic 45.0%
GGGAAGGACAGAAAATGGAT+GGG - chr8_3:4656099-4656118 None:intergenic 45.0%
AGGGAAGGACAGAAAATGGA+TGG - chr8_3:4656100-4656119 None:intergenic 45.0%
GAGTCACCTTCAAAGGAGTT+TGG - chr8_3:4656273-4656292 None:intergenic 45.0%
TGCATGTGAGTCACCTTCAA+AGG - chr8_3:4656280-4656299 None:intergenic 45.0%
! TGGTTTGTAACCGTTTGAGG+AGG - chr8_3:4656307-4656326 None:intergenic 45.0%
GAAAAGCCCCTTCTCATCTT+TGG + chr8_3:4656570-4656589 Msa1271190:intron 45.0%
CAGATCTAAGCACAGAAACG+AGG + chr8_3:4656869-4656888 Msa1271190:intron 45.0%
TCATTTCTCCGCGGAATAGA+CGG + chr8_3:4656892-4656911 Msa1271190:CDS 45.0%
! TCCGTTTTCATCGTCGAATG+CGG - chr8_3:4656953-4656972 None:intergenic 45.0%
AGGAGCGAAAGAGAAGGAAA+CGG + chr8_3:4657015-4657034 Msa1271190:CDS 45.0%
AGAACATGAACCCCTTTCGA+CGG - chr8_3:4657055-4657074 None:intergenic 45.0%
ATTCGTCAAGGAAGAAGCTG+AGG + chr8_3:4657127-4657146 Msa1271190:CDS 45.0%
!! ATCCGGTGAGTTTGTTGTAG+TGG + chr8_3:4657208-4657227 Msa1271190:intron 45.0%
! GAATCTGAAGCCAAGACAAG+TGG + chr8_3:4657526-4657545 Msa1271190:CDS 45.0%
GGTTTCAAAACAGAAGGGCA+AGG + chr8_3:4657555-4657574 Msa1271190:CDS 45.0%
AGGTGAGCTTTCTTCTTCTC+AGG + chr8_3:4657575-4657594 Msa1271190:intron 45.0%
GGTGAGCTTTCTTCTTCTCA+GGG + chr8_3:4657576-4657595 Msa1271190:intron 45.0%
GTGAGCTTTCTTCTTCTCAG+GGG + chr8_3:4657577-4657596 Msa1271190:intron 45.0%
! GCTTTTGTGCATGTAGTAGG+TGG - chr8_3:4657944-4657963 None:intergenic 45.0%
GTGTTCCATGCTGTTATGGA+AGG + chr8_3:4658158-4658177 Msa1271190:intron 45.0%
! GTGCTTTGGTTCAATGATGC+AGG + chr8_3:4658200-4658219 Msa1271190:intron 45.0%
! ACATTGTAAGAGTGGTGGGA+GGG - chr8_3:4658369-4658388 None:intergenic 45.0%
TAGAGCGAATACTCATGGTC+GGG - chr8_3:4658545-4658564 None:intergenic 45.0%
CTAGAGCGAATACTCATGGT+CGG - chr8_3:4658546-4658565 None:intergenic 45.0%
! GGATCTAGAGCGAATACTCA+TGG - chr8_3:4658550-4658569 None:intergenic 45.0%
! TCGCTCTAGATCCTAGTAGT+AGG + chr8_3:4658557-4658576 Msa1271190:three_prime_UTR 45.0%
! CGCTCTAGATCCTAGTAGTA+GGG + chr8_3:4658558-4658577 Msa1271190:three_prime_UTR 45.0%
GCCTACATTACCCTACTACT+AGG - chr8_3:4658571-4658590 None:intergenic 45.0%
AGTAGTAGGGTAATGTAGGC+AGG + chr8_3:4658571-4658590 Msa1271190:three_prime_UTR 45.0%
GTAGTAGGGTAATGTAGGCA+GGG + chr8_3:4658572-4658591 Msa1271190:three_prime_UTR 45.0%
! TACCACTTGGTGAGAAAAGG+TGG + chr8_3:4658959-4658978 Msa1271190:three_prime_UTR 45.0%
! ACCACTTGGTGAGAAAAGGT+GGG + chr8_3:4658960-4658979 Msa1271190:three_prime_UTR 45.0%
GAAGAGGGGGACAAATTAAG+GGG + chr8_3:4658998-4659017 Msa1271190:three_prime_UTR 45.0%
ATTAAGGGGATTCCCATGAG+GGG + chr8_3:4659012-4659031 Msa1271190:three_prime_UTR 45.0%
!! TATTTATTTATGAATTAAAA+CGG + chr8_3:4656767-4656786 Msa1271190:intron 5.0%
! TGGGCAGCTATGGACTATGA+TGG - chr8_3:4656074-4656093 None:intergenic 50.0%
GGACAGAAAATGGATGGGGT+TGG - chr8_3:4656094-4656113 None:intergenic 50.0%
CATGCACAAGCCTCCTCAAA+CGG + chr8_3:4656294-4656313 Msa1271190:CDS 50.0%
GAAACGAGGTCATTTCTCCG+CGG + chr8_3:4656883-4656902 Msa1271190:CDS 50.0%
CAACACTCCACTACCATCCA+TGG + chr8_3:4656915-4656934 Msa1271190:CDS 50.0%
! GTTTTCATCGTCGAATGCGG+CGG - chr8_3:4656950-4656969 None:intergenic 50.0%
GCCGCATTCGACGATGAAAA+CGG + chr8_3:4656949-4656968 Msa1271190:CDS 50.0%
!! ATGCTTGACACGGTGCTGTT+CGG - chr8_3:4656985-4657004 None:intergenic 50.0%
AGCACCGTGTCAAGCATTAG+TGG + chr8_3:4656988-4657007 Msa1271190:CDS 50.0%
GGAAAGAGGAGCGAAAGAGA+AGG + chr8_3:4657009-4657028 Msa1271190:CDS 50.0%
ATGAAAACGACGCCGTCGAA+AGG + chr8_3:4657040-4657059 Msa1271190:CDS 50.0%
TGAAAACGACGCCGTCGAAA+GGG + chr8_3:4657041-4657060 Msa1271190:CDS 50.0%
GAAAGGGGTTCATGTTCTCG+CGG + chr8_3:4657057-4657076 Msa1271190:CDS 50.0%
! GGCGGAAGTGATGATGATGA+CGG + chr8_3:4657081-4657100 Msa1271190:CDS 50.0%
!! GGAAGTGATGATGATGACGG+CGG + chr8_3:4657084-4657103 Msa1271190:CDS 50.0%
GAAGAAGCTGAGGTTGTCGA+AGG + chr8_3:4657137-4657156 Msa1271190:CDS 50.0%
! TCTGAAGCCAAGACAAGTGG+AGG + chr8_3:4657529-4657548 Msa1271190:CDS 50.0%
AACCACACCTCCACTTGTCT+TGG - chr8_3:4657539-4657558 None:intergenic 50.0%
! CACATTGTAAGAGTGGTGGG+AGG - chr8_3:4658370-4658389 None:intergenic 50.0%
GGGCACATTGTAAGAGTGGT+GGG - chr8_3:4658373-4658392 None:intergenic 50.0%
AGGGCACATTGTAAGAGTGG+TGG - chr8_3:4658374-4658393 None:intergenic 50.0%
! CGAAGGGCACATTGTAAGAG+TGG - chr8_3:4658377-4658396 None:intergenic 50.0%
TGAGGACGATGCAGATGACA+CGG - chr8_3:4658413-4658432 None:intergenic 50.0%
! GTGTTGGCCGTTGAACACTT+GGG - chr8_3:4658483-4658502 None:intergenic 50.0%
! CTCATGGTCGGGAACGATTT+TGG - chr8_3:4658534-4658553 None:intergenic 50.0%
! TCCCACCTTTTCTCACCAAG+TGG - chr8_3:4658964-4658983 None:intergenic 50.0%
TTCCCATGAGGGGATAGTTG+TGG + chr8_3:4659022-4659041 Msa1271190:three_prime_UTR 50.0%
! GAGTGTTGCCGTCTATTCCG+CGG - chr8_3:4656903-4656922 None:intergenic 55.0%
CACTCCACTACCATCCATGG+CGG + chr8_3:4656918-4656937 Msa1271190:CDS 55.0%
GAAAACGACGCCGTCGAAAG+GGG + chr8_3:4657042-4657061 Msa1271190:CDS 55.0%
!! AGTGATGATGATGACGGCGG+AGG + chr8_3:4657087-4657106 Msa1271190:CDS 55.0%
AGCCAAGACAAGTGGAGGTG+TGG + chr8_3:4657534-4657553 Msa1271190:CDS 55.0%
GTTGAACACTTGGGCCTGAC+GGG - chr8_3:4658474-4658493 None:intergenic 55.0%
CGTTGAACACTTGGGCCTGA+CGG - chr8_3:4658475-4658494 None:intergenic 55.0%
CGTCAGGCCCAAGTGTTCAA+CGG + chr8_3:4658473-4658492 Msa1271190:CDS 55.0%
!! GGTGTTGGCCGTTGAACACT+TGG - chr8_3:4658484-4658503 None:intergenic 55.0%
GCCAACACCTGTCAACCCTT+GGG + chr8_3:4658495-4658514 Msa1271190:CDS 55.0%
AACACCTGTCAACCCTTGGG+CGG + chr8_3:4658498-4658517 Msa1271190:CDS 55.0%
GGATAGACATTGCCGCCCAA+GGG - chr8_3:4658513-4658532 None:intergenic 55.0%
TGGATAGACATTGCCGCCCA+AGG - chr8_3:4658514-4658533 None:intergenic 55.0%
TGGATGGGGTTGGGCAGCTA+TGG - chr8_3:4656084-4656103 None:intergenic 60.0%
ACTACCATCCATGGCGGCGA+CGG + chr8_3:4656924-4656943 Msa1271190:CDS 60.0%
AGGGGTTCATGTTCTCGCGG+CGG + chr8_3:4657060-4657079 Msa1271190:CDS 60.0%
!! GATGATGACGGCGGAGGTTG+CGG + chr8_3:4657093-4657112 Msa1271190:CDS 60.0%
GTGGCGACGGTGATTCGTCA+AGG + chr8_3:4657115-4657134 Msa1271190:CDS 60.0%
AGCAGCAGCAGCTGCTGATG+AGG - chr8_3:4658431-4658450 None:intergenic 60.0%
!! GACGGGTTGGCTGAAGCAGA+GGG - chr8_3:4658457-4658476 None:intergenic 60.0%
!! TGACGGGTTGGCTGAAGCAG+AGG - chr8_3:4658458-4658477 None:intergenic 60.0%
TCTGCTTCAGCCAACCCGTC+AGG + chr8_3:4658457-4658476 Msa1271190:CDS 60.0%
! AACACTTGGGCCTGACGGGT+TGG - chr8_3:4658470-4658489 None:intergenic 60.0%
GGCCAACACCTGTCAACCCT+TGG + chr8_3:4658494-4658513 Msa1271190:CDS 60.0%
GCCCAAGGGTTGACAGGTGT+TGG - chr8_3:4658499-4658518 None:intergenic 60.0%
ATTGCCGCCCAAGGGTTGAC+AGG - chr8_3:4658505-4658524 None:intergenic 60.0%
GTCGCCGCCATGGATGGTAG+TGG - chr8_3:4656925-4656944 None:intergenic 65.0%
GGTTCATGTTCTCGCGGCGG+CGG + chr8_3:4657063-4657082 Msa1271190:CDS 65.0%
!! GGGTTGGCTGAAGCAGAGGG+AGG - chr8_3:4658454-4658473 None:intergenic 65.0%
! GATGACGGCGGAGGTTGCGG+TGG + chr8_3:4657096-4657115 Msa1271190:CDS 70.0%
CGGCGACACGCTCGCACGAA+GGG - chr8_3:4658393-4658412 None:intergenic 70.0%
ACGGCGACACGCTCGCACGA+AGG - chr8_3:4658394-4658413 None:intergenic 70.0%
GGCGGAGGTTGCGGTGGCGA+CGG + chr8_3:4657102-4657121 Msa1271190:CDS 75.0%
! GCGGCCGTCGCCGCCATGGA+TGG - chr8_3:4656931-4656950 None:intergenic 80.0%
! TGCGGCGGCCGTCGCCGCCA+TGG - chr8_3:4656935-4656954 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 4655882 4659045 4655882 ID=Msa1271190;Name=Msa1271190
chr8_3 mRNA 4655882 4659045 4655882 ID=Msa1271190-mRNA-1;Parent=Msa1271190;Name=Msa1271190-mRNA-1;_AED=0.06;_eAED=0.06;_QI=311|1|1|1|1|1|4|493|306
chr8_3 exon 4655882 4656361 4655882 ID=Msa1271190-mRNA-1:exon:1599;Parent=Msa1271190-mRNA-1
chr8_3 exon 4656872 4657212 4656872 ID=Msa1271190-mRNA-1:exon:1600;Parent=Msa1271190-mRNA-1
chr8_3 exon 4657497 4657576 4657497 ID=Msa1271190-mRNA-1:exon:1601;Parent=Msa1271190-mRNA-1
chr8_3 exon 4658222 4659045 4658222 ID=Msa1271190-mRNA-1:exon:1602;Parent=Msa1271190-mRNA-1
chr8_3 five_prime_UTR 4655882 4656192 4655882 ID=Msa1271190-mRNA-1:five_prime_utr;Parent=Msa1271190-mRNA-1
chr8_3 CDS 4656193 4656361 4656193 ID=Msa1271190-mRNA-1:cds;Parent=Msa1271190-mRNA-1
chr8_3 CDS 4656872 4657212 4656872 ID=Msa1271190-mRNA-1:cds;Parent=Msa1271190-mRNA-1
chr8_3 CDS 4657497 4657576 4657497 ID=Msa1271190-mRNA-1:cds;Parent=Msa1271190-mRNA-1
chr8_3 CDS 4658222 4658552 4658222 ID=Msa1271190-mRNA-1:cds;Parent=Msa1271190-mRNA-1
chr8_3 three_prime_UTR 4658553 4659045 4658553 ID=Msa1271190-mRNA-1:three_prime_utr;Parent=Msa1271190-mRNA-1
Gene Sequence

>Msa1271190

ATGGGTGAGAAAGATGATGAATTTAGTTTGGGTTTAAGCTTGAGTTTAGGATTTGGAGAATATGCAAATAACAACAACCAAACTCCTTTGAAGGTGACTCACATGCACAAGCCTCCTCAAACGGTTACAAACCAAAGGGTTTCCTTCAATAACTTGTTCCATTTTCATGATCTAAGCACAGAAACGAGGTCATTTCTCCGCGGAATAGACGGCAACACTCCACTACCATCCATGGCGGCGACGGCCGCCGCATTCGACGATGAAAACGGAGTTTCATCACCGAACAGCACCGTGTCAAGCATTAGTGGAAAGAGGAGCGAAAGAGAAGGAAACGGAGATGAAAACGACGCCGTCGAAAGGGGTTCATGTTCTCGCGGCGGCGGAAGTGATGATGATGACGGCGGAGGTTGCGGTGGCGACGGTGATTCGTCAAGGAAGAAGCTGAGGTTGTCGAAGGAACAGTCAATGTTGTTGGAAGAAACTTTCAAGGAGCATAATACTCTGAATCCGAAACAAAAGCAAGCATTGGCAAAGCAGTTGAATCTGAAGCCAAGACAAGTGGAGGTGTGGTTTCAAAACAGAAGGGCAAGGACCAAGTTGAAGCAAACTGAAGTGGATTGTGAGTACTTGAAGAGATGCTGTGAGACTCTAACTGATGAGAATAGGAGGTTGCAAAAGGAAGTGCAAGAGCTTAGGGCATTGAAGTTATCTCCACAACTCTACATGCAAATGAACCCTCCCACCACTCTTACAATGTGCCCTTCGTGCGAGCGTGTCGCCGTGTCATCTGCATCGTCCTCATCAGCAGCTGCTGCTGCTCCTCCCTCTGCTTCAGCCAACCCGTCAGGCCCAAGTGTTCAACGGCCAACACCTGTCAACCCTTGGGCGGCAATGTCTATCCAAAATCGTTCCCGACCATGA
Protein sequence

>Msa1271190

MGEKDDEFSLGLSLSLGFGEYANNNNQTPLKVTHMHKPPQTVTNQRVSFNNLFHFHDLSTETRSFLRGIDGNTPLPSMAATAAAFDDENGVSSPNSTVSSISGKRSEREGNGDENDAVERGSCSRGGGSDDDDGGGCGGDGDSSRKKLRLSKEQSMLLEETFKEHNTLNPKQKQALAKQLNLKPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTDENRRLQKEVQELRALKLSPQLYMQMNPPTTLTMCPSCERVAVSSASSSSAAAAAPPSASANPSGPSVQRPTPVNPWAAMSIQNRSRP*