AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1271350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1271350 MtrunA17_Chr8g0334881 84.326 319 18 1 6 292 1 319 3.88e-177 491
Msa1271350 MtrunA17_Chr4g0013361 47.667 300 129 10 6 283 1 294 4.35e-74 229
Msa1271350 MtrunA17_Chr1g0154031 56.075 107 46 1 15 121 76 181 2.34e-38 139
Msa1271350 MtrunA17_Chr3g0099131 53.704 108 49 1 14 121 40 146 1.33e-37 139
Msa1271350 MtrunA17_Chr1g0180391 54.783 115 46 3 6 119 14 123 6.85e-37 131
Msa1271350 MtrunA17_Chr8g0354661 53.271 107 49 1 15 121 37 142 1.42e-36 137
Msa1271350 MtrunA17_Chr7g0217221 44.853 136 73 2 11 145 8 142 1.99e-36 131
Msa1271350 MtrunA17_Chr4g0058631 45.062 162 76 5 7 161 4 159 2.08e-36 133
Msa1271350 MtrunA17_Chr1g0193801 32.653 294 159 9 7 278 4 280 2.83e-36 133
Msa1271350 MtrunA17_Chr5g0410961 51.754 114 52 2 11 124 8 118 3.26e-36 132
Msa1271350 MtrunA17_Chr1g0209661 42.520 127 72 1 3 129 15 140 3.91e-36 131
Msa1271350 MtrunA17_Chr7g0270891 53.043 115 53 1 7 121 4 117 9.90e-36 131
Msa1271350 MtrunA17_Chr7g0274581 48.333 120 61 1 15 134 12 130 1.15e-35 127
Msa1271350 MtrunA17_Chr3g0080861 49.533 107 53 1 15 121 37 142 1.32e-35 134
Msa1271350 MtrunA17_Chr6g0453211 48.760 121 61 1 11 131 8 127 2.68e-35 129
Msa1271350 MtrunA17_Chr1g0194301 46.154 117 62 1 9 125 27 142 6.01e-35 127
Msa1271350 MtrunA17_Chr4g0039971 50.926 108 52 1 11 118 9 115 1.09e-34 128
Msa1271350 MtrunA17_Chr2g0281071 51.376 109 51 2 15 122 13 120 1.40e-34 128
Msa1271350 MtrunA17_Chr2g0327821 50.407 123 60 1 12 134 3 124 1.62e-34 125
Msa1271350 MtrunA17_Chr1g0194291 44.915 118 64 1 8 125 14 130 2.35e-34 125
Msa1271350 MtrunA17_Chr7g0228231 47.368 114 59 1 15 128 14 126 2.41e-34 124
Msa1271350 MtrunA17_Chr4g0060721 49.565 115 55 2 15 129 13 124 2.71e-34 127
Msa1271350 MtrunA17_Chr1g0211161 50.893 112 54 1 7 118 5 115 3.69e-34 124
Msa1271350 MtrunA17_Chr5g0395281 49.541 109 54 1 10 118 7 114 4.29e-34 125
Msa1271350 MtrunA17_Chr2g0323411 49.107 112 55 2 11 121 8 118 4.55e-34 126
Msa1271350 MtrunA17_Chr6g0450101 47.107 121 61 3 3 122 3 121 5.44e-34 123
Msa1271350 MtrunA17_Chr8g0342541 44.928 138 73 2 7 142 4 140 6.35e-34 126
Msa1271350 MtrunA17_Chr2g0330041 48.092 131 64 3 7 134 4 133 6.84e-34 127
Msa1271350 MtrunA17_Chr1g0167661 39.560 182 97 6 15 187 12 189 7.83e-34 124
Msa1271350 MtrunA17_Chr2g0311221 50.000 118 58 1 11 128 10 126 8.14e-34 125
Msa1271350 MtrunA17_Chr5g0397231 50.926 108 52 1 7 114 4 110 9.88e-34 125
Msa1271350 MtrunA17_Chr8g0387421 48.696 115 58 1 7 121 4 117 1.05e-33 125
Msa1271350 MtrunA17_Chr1g0168661 49.565 115 57 1 7 121 13 126 1.34e-33 123
Msa1271350 MtrunA17_Chr3g0117091 52.336 107 50 1 12 118 9 114 1.60e-33 125
Msa1271350 MtrunA17_Chr1g0193371 50.435 115 56 1 7 121 4 117 1.76e-33 125
Msa1271350 MtrunA17_Chr2g0309911 50.000 112 55 1 7 118 3 113 2.13e-33 124
Msa1271350 MtrunA17_Chr2g0323351 41.722 151 85 2 11 161 8 155 2.42e-33 122
Msa1271350 MtrunA17_Chr3g0092401 48.673 113 56 2 15 126 13 124 3.99e-33 123
Msa1271350 MtrunA17_Chr7g0254411 48.760 121 57 3 15 131 12 131 4.86e-33 124
Msa1271350 MtrunA17_Chr7g0261281 41.667 132 76 1 15 146 12 142 5.66e-33 122
Msa1271350 MtrunA17_Chr4g0048511 49.541 109 53 2 15 122 13 120 5.70e-33 124
Msa1271350 MtrunA17_Chr8g0342521 45.802 131 68 2 7 135 4 133 6.99e-33 123
Msa1271350 MtrunA17_Chr1g0203441 51.327 113 53 2 16 127 14 125 8.19e-33 121
Msa1271350 MtrunA17_Chr3g0115821 48.148 108 55 1 11 118 8 114 8.29e-33 123
Msa1271350 MtrunA17_Chr6g0453471 43.066 137 75 2 11 147 8 141 8.74e-33 123
Msa1271350 MtrunA17_Chr1g0186061 50.000 108 53 1 11 118 16 122 1.15e-32 120
Msa1271350 MtrunA17_Chr4g0042671 35.885 209 105 6 15 196 12 218 1.74e-32 124
Msa1271350 MtrunA17_Chr8g0385321 50.000 108 53 1 11 118 8 114 3.10e-32 121
Msa1271350 MtrunA17_Chr2g0328771 49.138 116 56 2 15 130 20 132 3.29e-32 121
Msa1271350 MtrunA17_Chr1g0167691 41.985 131 74 2 11 140 8 137 3.41e-32 119
Msa1271350 MtrunA17_Chr7g0217741 47.706 109 55 2 15 122 12 119 3.96e-32 120
Msa1271350 MtrunA17_Chr4g0022881 41.727 139 79 2 11 149 8 144 4.27e-32 119
Msa1271350 MtrunA17_Chr1g0187761 46.218 119 61 2 15 133 12 127 4.81e-32 119
Msa1271350 MtrunA17_Chr3g0131121 42.000 150 75 3 11 149 8 156 5.39e-32 120
Msa1271350 MtrunA17_Chr8g0342481 50.877 114 52 3 7 118 4 115 6.09e-32 122
Msa1271350 MtrunA17_Chr8g0349261 54.286 105 46 2 15 118 13 116 9.27e-32 119
Msa1271350 MtrunA17_Chr1g0203411 48.598 107 54 1 15 121 12 117 1.47e-31 119
Msa1271350 MtrunA17_Chr1g0151941 48.624 109 54 2 11 118 8 115 3.18e-31 117
Msa1271350 MtrunA17_Chr7g0271241 51.402 107 51 1 7 113 4 109 3.62e-31 119
Msa1271350 MtrunA17_Chr2g0327351 44.366 142 73 3 11 151 8 144 3.63e-31 118
Msa1271350 MtrunA17_Chr1g0152011 37.129 202 112 6 11 209 8 197 3.68e-31 119
Msa1271350 MtrunA17_Chr4g0032401 48.760 121 59 3 15 133 17 136 3.93e-31 118
Msa1271350 MtrunA17_Chr4g0022931 50.943 106 50 2 15 119 13 117 4.27e-31 117
Msa1271350 MtrunA17_Chr4g0022901 43.284 134 74 2 15 147 13 145 5.32e-31 117
Msa1271350 MtrunA17_Chr5g0435101 48.148 108 55 1 11 118 7 113 5.69e-31 115
Msa1271350 MtrunA17_Chr4g0068921 45.378 119 64 1 6 124 15 132 5.72e-31 114
Msa1271350 MtrunA17_Chr4g0053431 42.581 155 87 2 17 171 5 157 6.48e-31 116
Msa1271350 MtrunA17_Chr3g0103281 48.148 108 55 1 11 118 8 114 1.22e-30 117
Msa1271350 MtrunA17_Chr4g0022891 40.397 151 89 1 11 161 8 157 1.27e-30 115
Msa1271350 MtrunA17_Chr4g0037141 47.222 108 56 1 11 118 8 114 1.37e-30 116
Msa1271350 MtrunA17_Chr4g0028311 48.624 109 54 2 11 118 8 115 2.23e-30 116
Msa1271350 MtrunA17_Chr2g0322521 54.206 107 48 1 15 121 29 134 2.75e-30 117
Msa1271350 MtrunA17_Chr4g0022911 46.341 123 64 2 15 136 13 134 3.68e-30 115
Msa1271350 MtrunA17_Chr8g0346561 46.154 117 61 2 15 130 12 127 6.62e-30 114
Msa1271350 MtrunA17_Chr6g0470971 52.427 103 48 1 16 118 15 116 6.75e-30 114
Msa1271350 MtrunA17_Chr6g0487491 40.506 158 78 5 11 153 8 164 8.16e-30 113
Msa1271350 MtrunA17_Chr4g0030881 51.724 116 46 4 12 118 4 118 8.66e-30 113
Msa1271350 MtrunA17_Chr5g0440781 47.706 109 55 2 15 122 12 119 9.69e-30 111
Msa1271350 MtrunA17_Chr5g0441131 49.524 105 51 2 15 118 9 112 1.04e-29 111
Msa1271350 MtrunA17_Chr3g0088461 50.962 104 50 1 15 118 22 124 1.11e-29 115
Msa1271350 MtrunA17_Chr5g0417821 46.789 109 56 2 15 122 7 114 1.33e-29 113
Msa1271350 MtrunA17_Chr5g0401731 51.818 110 50 3 9 118 8 114 1.33e-29 114
Msa1271350 MtrunA17_Chr3g0135311 39.506 162 94 3 11 171 8 166 2.05e-29 114
Msa1271350 MtrunA17_Chr5g0441141 47.706 109 55 2 15 122 12 119 2.29e-29 112
Msa1271350 MtrunA17_Chr5g0440761 47.706 109 55 2 15 122 12 119 2.35e-29 112
Msa1271350 MtrunA17_Chr4g0008551 51.961 102 47 2 17 118 38 137 4.55e-29 113
Msa1271350 MtrunA17_Chr2g0293911 44.538 119 65 1 6 124 15 132 4.73e-29 113
Msa1271350 MtrunA17_Chr3g0110351 48.148 108 55 1 11 118 8 114 5.61e-29 112
Msa1271350 MtrunA17_Chr4g0057031 49.074 108 54 1 11 118 8 114 7.49e-29 111
Msa1271350 MtrunA17_Chr5g0400821 47.706 109 55 2 11 118 8 115 7.60e-29 112
Msa1271350 MtrunA17_Chr3g0099141 51.111 90 43 1 11 100 36 124 9.04e-29 107
Msa1271350 MtrunA17_Chr5g0434571 48.148 108 55 1 11 118 44 150 9.73e-29 112
Msa1271350 MtrunA17_Chr4g0055981 45.631 103 55 1 12 114 52 153 1.03e-28 109
Msa1271350 MtrunA17_Chr6g0452271 46.018 113 59 2 11 122 8 119 1.16e-28 112
Msa1271350 MtrunA17_Chr7g0264641 47.706 109 55 2 11 118 8 115 1.38e-28 110
Msa1271350 MtrunA17_Chr4g0044421 49.020 102 51 1 17 118 14 114 1.68e-28 108
Msa1271350 MtrunA17_Chr1g0192411 46.296 108 57 1 15 122 12 118 1.74e-28 112
Msa1271350 MtrunA17_Chr4g0068061 31.466 232 122 7 15 240 12 212 4.79e-28 110
Msa1271350 MtrunA17_Chr4g0054391 48.077 104 52 2 11 113 8 110 6.32e-28 109
Msa1271350 MtrunA17_Chr7g0228891 45.133 113 61 1 11 123 8 119 6.51e-28 108
Msa1271350 MtrunA17_Chr3g0121241 46.000 100 53 1 15 114 42 140 8.27e-28 109
Msa1271350 MtrunA17_Chr4g0070611 29.412 221 150 4 12 230 9 225 8.91e-28 109
Msa1271350 MtrunA17_Chr4g0070641 35.583 163 94 4 12 166 9 168 9.10e-28 105
Msa1271350 MtrunA17_Chr4g0072751 48.571 105 52 2 11 114 8 111 1.11e-27 109
Msa1271350 MtrunA17_Chr3g0133601 50.000 104 50 2 17 120 37 138 1.33e-27 106
Msa1271350 MtrunA17_Chr6g0454921 50.000 108 51 3 6 113 5 109 2.79e-27 105
Msa1271350 MtrunA17_Chr7g0275911 44.000 100 55 1 15 114 12 110 4.69e-27 106
Msa1271350 MtrunA17_Chr1g0194951 45.192 104 56 1 15 118 12 114 1.18e-26 107
Msa1271350 MtrunA17_Chr7g0269831 44.030 134 69 3 15 148 12 139 6.21e-26 105
Msa1271350 MtrunA17_Chr8g0343831 44.000 100 55 1 15 114 8 106 2.48e-25 101
Msa1271350 MtrunA17_Chr7g0247131 51.429 105 41 3 47 143 11 113 2.58e-25 101
Msa1271350 MtrunA17_Chr7g0238631 37.273 220 114 7 17 219 113 325 2.80e-25 105
Msa1271350 MtrunA17_Chr1g0157731 49.020 102 50 2 17 118 91 190 5.24e-25 104
Msa1271350 MtrunA17_Chr1g0157731 33.628 113 70 4 3 112 23 133 2.72e-11 64.3
Msa1271350 MtrunA17_Chr8g0360111 46.939 98 51 1 15 112 25 121 5.82e-25 100
Msa1271350 MtrunA17_Chr4g0058991 45.217 115 61 2 4 118 196 308 6.99e-25 103
Msa1271350 MtrunA17_Chr7g0228531 42.623 122 63 3 1 118 200 318 8.25e-25 103
Msa1271350 MtrunA17_Chr5g0434931 45.045 111 58 2 15 123 35 144 8.58e-25 100
Msa1271350 MtrunA17_Chr3g0139671 48.039 102 51 2 17 118 85 184 1.18e-24 103
Msa1271350 MtrunA17_Chr3g0139671 31.304 115 74 4 1 112 15 127 6.75e-11 62.8
Msa1271350 MtrunA17_Chr5g0437321 51.020 98 46 2 17 114 19 114 2.60e-24 99.4
Msa1271350 MtrunA17_Chr6g0480581 47.619 105 53 2 17 121 4 106 4.05e-24 97.8
Msa1271350 MtrunA17_Chr5g0429661 44.545 110 59 2 9 118 114 221 6.68e-24 99.8
Msa1271350 MtrunA17_Chr7g0220341 39.597 149 74 5 15 157 25 163 7.28e-24 97.8
Msa1271350 MtrunA17_Chr7g0240821 45.833 96 51 1 19 114 5 99 2.15e-23 95.5
Msa1271350 MtrunA17_Chr7g0228991 46.000 100 53 1 15 114 29 127 2.29e-23 96.7
Msa1271350 MtrunA17_Chr5g0434911 44.037 109 58 2 15 121 21 128 2.92e-23 96.3
Msa1271350 MtrunA17_Chr3g0117511 46.078 102 53 2 17 118 183 282 4.77e-23 98.2
Msa1271350 MtrunA17_Chr5g0434831 43.269 104 58 1 15 118 7 109 7.64e-23 93.2
Msa1271350 MtrunA17_Chr5g0434841 42.609 115 64 2 4 118 10 122 1.05e-22 95.5
Msa1271350 MtrunA17_Chr5g0417621 47.619 105 53 2 17 121 134 236 1.06e-21 94.4
Msa1271350 MtrunA17_Chr7g0238651 43.363 113 61 2 20 130 10 121 2.06e-21 92.8
Msa1271350 MtrunA17_Chr4g0042501 48.958 96 47 2 17 112 105 198 2.72e-21 93.2
Msa1271350 MtrunA17_Chr7g0228481 40.833 120 67 3 14 133 217 332 5.19e-21 92.4
Msa1271350 MtrunA17_Chr3g0125801 47.619 105 53 2 8 112 7 109 2.32e-20 88.6
Msa1271350 MtrunA17_Chr5g0395221 48.718 78 39 1 15 92 12 88 3.22e-20 83.2
Msa1271350 MtrunA17_Chr5g0397841 47.423 97 49 2 17 113 110 204 3.72e-20 90.1
Msa1271350 MtrunA17_Chr8g0342461 47.727 88 44 2 7 93 4 90 4.01e-20 84.7
Msa1271350 MtrunA17_Chr4g0042611 43.902 82 45 1 11 92 8 88 4.10e-20 82.8
Msa1271350 MtrunA17_Chr6g0460661 35.461 141 77 3 17 157 16 142 1.01e-19 84.0
Msa1271350 MtrunA17_Chr8g0342471 46.591 88 45 2 7 93 4 90 1.48e-19 83.2
Msa1271350 MtrunA17_Chr8g0342511 44.706 85 46 1 7 91 4 87 3.41e-19 80.9
Msa1271350 MtrunA17_Chr2g0323321 40.404 99 58 1 11 109 7 104 3.78e-19 81.3
Msa1271350 MtrunA17_Chr8g0342531 41.304 92 53 1 7 98 4 94 7.68e-19 81.6
Msa1271350 MtrunA17_Chr7g0254261 45.714 105 55 2 17 121 89 191 8.77e-19 85.1
Msa1271350 MtrunA17_Chr6g0460671 40.179 112 65 2 17 128 99 208 1.90e-18 84.3
Msa1271350 MtrunA17_Chr7g0228401 44.565 92 49 2 28 119 290 379 7.82e-18 83.2
Msa1271350 MtrunA17_Chr7g0233061 39.286 112 64 3 17 128 180 287 1.18e-17 82.0
Msa1271350 MtrunA17_Chr5g0425591 44.048 84 45 2 15 97 9 91 6.52e-17 74.3
Msa1271350 MtrunA17_Chr8g0362231 38.235 102 61 2 20 121 25 124 1.74e-16 79.3
Msa1271350 MtrunA17_Chr5g0416341 32.653 147 92 4 9 152 20 162 5.24e-16 77.8
Msa1271350 MtrunA17_Chr6g0453751 40.000 100 50 3 7 97 12 110 6.85e-16 72.8
Msa1271350 MtrunA17_Chr5g0434901 48.000 75 34 2 40 114 2 71 8.67e-16 72.0
Msa1271350 MtrunA17_Chr3g0093811 48.571 70 35 1 49 118 16 84 2.43e-15 74.3
Msa1271350 MtrunA17_Chr7g0229101 36.709 158 83 6 49 199 6 153 7.07e-15 72.0
Msa1271350 MtrunA17_Chr1g0177901 41.935 93 52 2 27 119 4 94 1.02e-14 71.6
Msa1271350 MtrunA17_Chr2g0294811 36.364 99 60 2 15 111 12 109 2.77e-14 68.2
Msa1271350 MtrunA17_Chr7g0229131 32.800 125 70 3 49 173 6 116 3.75e-14 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1271350 AT3G60460.1 50.323 310 119 11 4 289 2 300 1.47e-84 256
Msa1271350 AT4G26930.1 56.075 107 46 1 15 121 19 124 2.93e-39 142
Msa1271350 AT5G55020.1 54.206 107 48 1 15 121 26 131 3.88e-37 138
Msa1271350 AT2G32460.1 54.206 107 48 1 15 121 18 123 1.05e-36 137
Msa1271350 AT2G32460.2 54.206 107 48 1 15 121 6 111 1.09e-36 136
Msa1271350 AT3G27810.1 38.710 155 93 2 15 169 20 172 1.15e-36 130
Msa1271350 AT5G06100.1 49.550 111 55 1 11 121 28 137 5.78e-36 134
Msa1271350 AT3G11440.2 51.402 107 51 1 15 121 41 146 6.79e-36 134
Msa1271350 AT2G26960.1 50.400 125 57 2 2 122 3 126 1.08e-35 133
Msa1271350 AT5G06100.5 49.550 111 55 1 11 121 28 137 1.95e-35 134
Msa1271350 AT5G06100.2 49.550 111 55 1 11 121 28 137 1.95e-35 134
Msa1271350 AT5G06100.3 49.550 111 55 1 11 121 28 137 1.95e-35 134
Msa1271350 AT5G06100.4 49.550 111 55 1 11 121 28 137 1.95e-35 134
Msa1271350 AT3G01140.2 46.212 132 68 2 11 142 8 136 1.98e-35 130
Msa1271350 AT3G11440.3 51.402 107 51 1 15 121 41 146 2.78e-35 134
Msa1271350 AT3G11440.4 51.402 107 51 1 15 121 41 146 2.78e-35 134
Msa1271350 AT3G11440.1 51.402 107 51 1 15 121 41 146 2.78e-35 134
Msa1271350 AT3G01140.1 46.212 132 68 2 11 142 51 179 3.34e-35 131
Msa1271350 AT3G47600.1 42.105 152 82 4 11 160 8 155 8.06e-35 129
Msa1271350 AT3G12720.1 47.445 137 69 2 1 135 8 143 8.26e-35 128
Msa1271350 AT4G01680.3 53.153 111 51 1 12 122 9 118 9.58e-35 126
Msa1271350 AT5G40350.1 47.899 119 59 2 15 133 17 132 2.16e-34 124
Msa1271350 AT1G08810.1 43.919 148 80 2 11 158 8 152 2.57e-34 126
Msa1271350 AT3G13890.2 50.893 112 54 1 7 118 4 114 2.97e-34 127
Msa1271350 AT4G01680.1 53.153 111 51 1 12 122 9 118 3.06e-34 127
Msa1271350 AT1G74650.1 45.968 124 66 1 15 138 12 134 4.48e-34 127
Msa1271350 AT1G25340.1 43.307 127 71 1 3 129 6 131 4.56e-34 125
Msa1271350 AT3G61250.1 52.212 113 51 2 11 123 8 117 4.89e-34 125
Msa1271350 AT4G28110.1 49.107 112 55 2 11 121 8 118 5.06e-34 125
Msa1271350 AT3G01530.1 47.059 119 59 2 9 127 19 133 8.57e-34 122
Msa1271350 AT3G02940.2 47.788 113 57 2 11 122 8 119 1.02e-33 125
Msa1271350 AT2G47190.1 48.649 111 56 1 15 125 20 129 1.11e-33 124
Msa1271350 AT3G02940.1 47.788 113 57 2 11 122 8 119 1.47e-33 125
Msa1271350 AT3G02940.3 47.788 113 57 2 11 122 8 119 1.47e-33 125
Msa1271350 AT1G79180.1 50.000 122 59 2 11 131 10 130 1.68e-33 124
Msa1271350 AT1G48000.1 46.847 111 58 1 15 125 32 141 1.70e-33 123
Msa1271350 AT2G16720.1 47.727 132 64 4 11 141 8 135 1.98e-33 123
Msa1271350 AT3G48920.1 53.982 113 51 1 10 122 13 124 1.99e-33 123
Msa1271350 AT5G65230.1 50.000 108 53 1 11 118 8 114 2.00e-33 124
Msa1271350 AT4G21440.1 49.541 109 53 2 15 122 12 119 2.79e-33 125
Msa1271350 AT5G26660.1 51.818 110 52 1 12 121 9 117 3.21e-33 125
Msa1271350 AT5G59780.3 50.420 119 58 1 12 130 5 122 3.64e-33 122
Msa1271350 AT3G30210.1 52.885 104 48 1 15 118 27 129 3.85e-33 123
Msa1271350 AT5G62470.2 45.385 130 62 2 15 136 12 140 4.48e-33 124
Msa1271350 AT5G15310.4 34.653 202 114 5 11 207 8 196 5.71e-33 122
Msa1271350 AT1G09540.1 51.786 112 53 1 7 118 4 114 5.92e-33 124
Msa1271350 AT4G34990.1 45.038 131 69 2 11 141 8 135 6.03e-33 122
Msa1271350 AT1G68320.1 44.444 117 64 1 13 129 17 132 7.02e-33 122
Msa1271350 AT1G63910.1 48.696 115 58 1 7 121 4 117 7.48e-33 124
Msa1271350 AT5G15310.1 43.939 132 71 2 11 142 8 136 7.51e-33 123
Msa1271350 AT5G15310.2 43.939 132 71 2 11 142 8 136 7.91e-33 123
Msa1271350 AT1G57560.2 48.333 120 59 2 5 124 2 118 9.80e-33 122
Msa1271350 AT3G28910.1 49.074 108 54 1 11 118 8 114 1.05e-32 123
Msa1271350 AT1G57560.1 48.333 120 59 2 5 124 2 118 1.12e-32 122
Msa1271350 AT1G35515.1 43.827 162 79 7 11 163 8 166 1.13e-32 120
Msa1271350 AT2G31180.1 46.552 116 60 2 15 129 12 126 1.23e-32 120
Msa1271350 AT5G54230.1 48.624 109 54 2 15 122 12 119 1.29e-32 122
Msa1271350 AT1G22640.1 50.000 108 53 1 11 118 8 114 1.50e-32 120
Msa1271350 AT5G16770.4 48.148 108 55 1 11 118 8 114 1.56e-32 122
Msa1271350 AT5G16770.3 48.148 108 55 1 11 118 8 114 1.56e-32 122
Msa1271350 AT5G16770.1 48.148 108 55 1 11 118 8 114 2.25e-32 122
Msa1271350 AT5G16770.2 48.148 108 55 1 11 118 8 114 2.25e-32 122
Msa1271350 AT4G37780.1 52.294 109 50 2 11 118 8 115 2.96e-32 121
Msa1271350 AT3G46130.1 51.818 110 52 1 12 121 6 114 3.65e-32 120
Msa1271350 AT4G13480.1 45.455 132 65 2 12 143 3 127 4.03e-32 120
Msa1271350 AT3G13890.1 47.107 121 54 2 7 118 4 123 8.29e-32 121
Msa1271350 AT4G09460.1 44.371 151 74 6 11 155 8 154 9.04e-32 118
Msa1271350 AT3G24310.1 45.736 129 63 2 12 140 15 136 1.06e-31 119
Msa1271350 AT4G05100.1 48.182 110 54 2 15 124 13 119 1.43e-31 120
Msa1271350 AT1G16490.1 50.450 111 53 2 11 120 10 119 1.63e-31 118
Msa1271350 AT1G25340.2 42.520 127 67 2 3 129 6 126 2.31e-31 118
Msa1271350 AT5G62470.1 45.385 130 61 3 15 136 12 139 2.44e-31 120
Msa1271350 AT4G38620.1 41.447 152 82 3 11 156 8 158 2.62e-31 118
Msa1271350 AT5G10280.1 47.222 108 56 1 11 118 8 114 4.25e-31 119
Msa1271350 AT3G12820.1 50.877 114 53 2 11 124 10 120 4.67e-31 116
Msa1271350 AT4G01680.2 48.780 123 50 3 12 122 9 130 5.51e-31 119
Msa1271350 AT1G25340.3 42.520 127 67 2 3 129 6 126 5.59e-31 118
Msa1271350 AT1G34670.1 47.222 108 56 1 11 118 8 114 7.49e-31 119
Msa1271350 AT1G56160.1 47.222 108 56 1 11 118 10 116 1.55e-30 116
Msa1271350 AT5G23000.1 48.624 109 54 2 11 118 8 115 1.93e-30 117
Msa1271350 AT5G56110.1 48.148 108 55 1 11 118 8 114 2.28e-30 116
Msa1271350 AT5G14750.1 46.491 114 60 1 1 114 2 114 2.45e-30 113
Msa1271350 AT5G57620.1 49.541 109 53 2 11 118 8 115 3.86e-30 116
Msa1271350 AT5G07700.1 41.040 173 88 6 13 179 10 174 4.00e-30 116
Msa1271350 AT5G07700.2 41.040 173 88 6 13 179 10 174 4.00e-30 116
Msa1271350 AT3G50060.1 55.882 102 43 2 17 118 6 105 4.36e-30 115
Msa1271350 AT1G74430.1 49.107 112 55 2 11 121 8 118 5.29e-30 114
Msa1271350 AT5G07690.1 47.664 107 55 1 13 119 10 115 7.56e-30 115
Msa1271350 AT3G23250.1 32.971 276 159 10 15 281 12 270 8.23e-30 114
Msa1271350 AT3G53200.1 49.541 109 54 1 10 118 4 111 8.84e-30 113
Msa1271350 AT1G18570.1 47.826 115 57 2 10 124 8 119 1.54e-29 115
Msa1271350 AT3G27920.1 43.182 132 72 3 2 132 2 131 1.83e-29 112
Msa1271350 AT4G22680.1 49.123 114 55 2 11 124 8 118 2.09e-29 112
Msa1271350 AT3G06490.1 45.161 124 67 1 2 125 6 128 2.42e-29 114
Msa1271350 AT4G25560.1 46.721 122 62 2 6 127 1 119 4.00e-29 112
Msa1271350 AT5G61420.2 47.321 112 56 2 13 124 10 118 4.19e-29 114
Msa1271350 AT5G12870.1 47.321 112 57 2 15 125 18 128 4.27e-29 112
Msa1271350 AT1G06180.1 46.154 104 55 1 15 118 12 114 4.33e-29 111
Msa1271350 AT3G55730.1 50.000 126 56 4 17 137 56 179 4.79e-29 114
Msa1271350 AT3G13540.1 46.296 108 56 2 15 121 23 129 5.42e-29 111
Msa1271350 AT1G66230.1 47.748 111 57 1 11 121 8 117 5.53e-29 112
Msa1271350 AT4G17785.2 47.115 104 54 1 15 118 13 115 5.58e-29 113
Msa1271350 AT3G28470.1 50.000 104 51 1 11 114 8 110 6.68e-29 112
Msa1271350 AT4G17785.1 47.115 104 54 1 15 118 13 115 6.71e-29 113
Msa1271350 AT3G49690.1 48.624 109 54 2 11 118 8 115 6.93e-29 112
Msa1271350 AT5G49620.1 48.649 111 56 1 15 125 26 135 8.93e-29 112
Msa1271350 AT5G40330.1 48.077 104 52 2 12 114 8 110 1.30e-28 109
Msa1271350 AT5G67300.1 54.902 102 44 2 17 118 6 105 1.91e-28 111
Msa1271350 AT3G08500.1 46.847 111 58 1 8 118 23 132 1.98e-28 112
Msa1271350 AT5G65790.1 47.706 109 55 2 11 118 8 115 2.29e-28 112
Msa1271350 AT2G23290.1 51.754 114 52 3 6 118 1 112 2.45e-28 111
Msa1271350 AT1G79180.2 41.781 146 48 4 11 121 10 153 2.45e-28 111
Msa1271350 AT5G14340.1 37.736 159 92 3 11 167 20 173 3.05e-28 110
Msa1271350 AT5G62320.1 47.154 123 54 3 6 118 1 122 3.19e-28 109
Msa1271350 AT5G49330.1 47.115 104 54 1 15 118 12 114 3.35e-28 111
Msa1271350 AT5G60890.1 45.794 107 57 1 12 118 9 114 3.36e-28 110
Msa1271350 AT4G12350.1 47.368 114 57 2 11 124 8 118 3.36e-28 110
Msa1271350 AT2G47460.1 46.154 104 55 1 15 118 12 114 4.57e-28 111
Msa1271350 AT2G36890.1 44.068 118 62 3 11 127 8 122 5.78e-28 109
Msa1271350 AT5G52600.1 44.340 106 58 1 9 114 6 110 6.89e-28 107
Msa1271350 AT1G18710.1 46.429 112 58 2 11 121 8 118 8.28e-28 108
Msa1271350 AT5G16600.1 47.748 111 57 1 11 121 8 117 8.33e-28 110
Msa1271350 AT5G52260.1 47.458 118 59 2 8 125 5 119 9.77e-28 108
Msa1271350 AT2G36890.2 44.068 118 62 3 11 127 49 163 1.11e-27 110
Msa1271350 AT2G39880.1 52.941 102 46 2 17 118 50 149 1.16e-27 110
Msa1271350 AT4G37260.1 50.000 110 52 3 9 118 6 112 1.81e-27 108
Msa1271350 AT3G09230.1 49.550 111 51 3 8 118 49 154 1.70e-26 107
Msa1271350 AT2G26950.1 47.573 103 53 1 17 119 18 119 1.76e-26 107
Msa1271350 AT3G62610.1 45.192 104 56 1 15 118 12 114 2.09e-26 106
Msa1271350 AT1G74080.1 44.860 107 58 1 13 119 10 115 2.46e-26 106
Msa1271350 AT5G35550.1 42.241 116 64 2 12 127 11 123 3.27e-26 104
Msa1271350 AT1G66370.1 31.174 247 143 9 15 259 8 229 6.95e-26 103
Msa1271350 AT4G18770.1 50.000 102 49 2 17 118 217 316 7.07e-26 106
Msa1271350 AT3G27810.2 38.843 121 72 2 49 169 5 123 1.03e-25 100
Msa1271350 AT5G02320.1 49.107 112 54 3 17 127 127 236 1.21e-25 106
Msa1271350 AT5G02320.2 49.107 112 54 3 17 127 127 236 1.21e-25 106
Msa1271350 AT5G02320.3 49.107 112 54 3 17 127 67 176 1.42e-25 106
Msa1271350 AT5G49620.2 43.200 125 56 2 15 125 26 149 2.42e-25 103
Msa1271350 AT5G40360.1 46.903 113 56 3 7 119 150 258 1.54e-24 101
Msa1271350 AT4G32730.5 40.000 155 77 4 17 165 87 231 1.76e-24 103
Msa1271350 AT4G32730.5 36.082 97 59 3 17 112 35 129 2.38e-11 64.7
Msa1271350 AT4G32730.4 40.000 155 77 4 17 165 87 231 1.76e-24 103
Msa1271350 AT4G32730.4 36.082 97 59 3 17 112 35 129 2.38e-11 64.7
Msa1271350 AT4G32730.3 40.000 155 77 4 17 165 87 231 1.76e-24 103
Msa1271350 AT4G32730.3 36.082 97 59 3 17 112 35 129 2.38e-11 64.7
Msa1271350 AT4G32730.2 40.000 155 77 4 17 165 87 231 1.76e-24 103
Msa1271350 AT4G32730.2 36.082 97 59 3 17 112 35 129 2.38e-11 64.7
Msa1271350 AT4G32730.1 40.000 155 77 4 17 165 87 231 1.82e-24 103
Msa1271350 AT4G32730.1 36.082 97 59 3 17 112 35 129 2.77e-11 64.3
Msa1271350 AT1G69560.2 32.735 223 140 4 8 225 114 331 2.15e-24 101
Msa1271350 AT1G69560.1 32.735 223 140 4 8 225 98 315 2.32e-24 100
Msa1271350 AT5G11510.3 46.078 102 53 2 17 118 81 180 3.57e-24 102
Msa1271350 AT5G11510.3 35.052 97 60 3 17 112 29 123 2.99e-11 64.3
Msa1271350 AT5G11510.1 46.078 102 53 2 17 118 81 180 3.57e-24 102
Msa1271350 AT5G11510.1 35.052 97 60 3 17 112 29 123 2.99e-11 64.3
Msa1271350 AT5G11510.4 46.078 102 53 2 17 118 81 180 3.57e-24 102
Msa1271350 AT5G11510.4 35.052 97 60 3 17 112 29 123 2.99e-11 64.3
Msa1271350 AT5G58850.1 43.636 110 60 2 9 118 97 204 4.16e-24 101
Msa1271350 AT5G11510.2 46.078 102 53 2 17 118 81 180 4.34e-24 102
Msa1271350 AT5G11510.2 35.052 97 60 3 17 112 29 123 2.80e-11 64.3
Msa1271350 AT5G11510.5 46.078 102 53 2 17 118 81 180 4.54e-24 102
Msa1271350 AT5G11510.5 35.052 97 60 3 17 112 29 123 3.18e-11 64.3
Msa1271350 AT3G09370.2 50.000 102 49 2 17 118 135 234 5.62e-24 101
Msa1271350 AT3G09370.1 50.000 102 49 2 17 118 130 229 6.29e-24 101
Msa1271350 AT3G09370.3 50.000 102 49 2 17 118 143 242 8.21e-24 101
Msa1271350 AT3G46130.3 58.904 73 29 1 49 121 11 82 1.28e-23 96.7
Msa1271350 AT5G26660.2 58.904 73 29 1 49 121 15 86 1.78e-23 98.2
Msa1271350 AT5G59780.2 56.098 82 35 1 49 130 21 101 2.15e-23 95.5
Msa1271350 AT3G46130.4 58.904 73 29 1 49 121 21 92 2.32e-23 96.3
Msa1271350 AT5G40350.2 51.765 85 38 2 49 133 6 87 2.42e-23 94.4
Msa1271350 AT1G66380.1 46.000 100 53 1 15 114 8 106 4.24e-23 92.8
Msa1271350 AT3G47600.2 43.860 114 58 4 49 160 40 149 9.44e-23 96.3
Msa1271350 AT1G56650.1 46.000 100 53 1 15 114 8 106 1.21e-22 94.4
Msa1271350 AT3G12820.2 59.459 74 27 2 51 124 2 72 2.25e-22 92.4
Msa1271350 AT3G29020.1 43.363 113 59 3 17 129 65 172 2.26e-22 93.6
Msa1271350 AT3G27785.1 45.192 104 55 2 15 118 187 288 2.33e-22 96.7
Msa1271350 AT3G29020.2 43.363 113 59 3 17 129 67 174 2.40e-22 94.7
Msa1271350 AT5G11050.1 42.857 105 58 2 14 118 102 204 4.95e-22 95.5
Msa1271350 AT5G17800.1 43.697 119 63 3 5 121 79 195 6.81e-22 94.0
Msa1271350 AT1G26780.1 47.619 105 53 2 17 121 98 200 8.69e-22 92.8
Msa1271350 AT1G17950.1 45.714 105 55 2 17 121 5 107 9.37e-22 92.0
Msa1271350 AT1G26780.2 47.619 105 53 2 17 121 98 200 1.20e-21 93.6
Msa1271350 AT4G33450.1 41.880 117 66 2 15 131 17 131 4.37e-21 90.5
Msa1271350 AT1G66390.1 44.000 100 55 1 15 114 8 106 5.53e-21 90.1
Msa1271350 AT4G00540.2 50.459 109 48 4 15 119 101 207 7.49e-21 92.0
Msa1271350 AT4G00540.1 50.459 109 48 4 15 119 99 205 1.54e-20 91.3
Msa1271350 AT3G53200.2 55.714 70 30 1 49 118 10 78 2.03e-20 87.4
Msa1271350 AT1G73410.1 46.667 105 54 2 17 121 6 108 5.31e-20 87.0
Msa1271350 AT1G73410.2 46.667 105 54 2 17 121 6 108 7.91e-20 85.9
Msa1271350 AT2G37630.1 46.316 95 48 2 20 112 7 100 9.17e-20 88.6
Msa1271350 AT5G14750.3 56.250 64 27 1 51 114 18 80 5.53e-19 82.8
Msa1271350 AT2G25230.1 40.404 99 56 3 22 119 30 126 7.41e-19 84.0
Msa1271350 AT5G39700.1 41.525 118 67 2 4 121 43 158 1.00e-18 82.4
Msa1271350 AT5G35550.2 50.633 79 36 2 49 127 51 126 1.90e-18 83.2
Msa1271350 AT5G40430.1 37.143 105 63 3 15 119 52 153 3.54e-15 73.9
Msa1271350 AT1G14350.2 34.646 127 76 4 9 132 19 141 3.87e-15 75.5
Msa1271350 AT1G14350.1 34.646 127 76 4 9 132 19 141 3.87e-15 75.5
Msa1271350 AT1G66380.3 51.515 66 31 1 49 114 9 73 1.26e-14 68.9
Msa1271350 AT2G02820.2 35.398 113 69 3 9 121 24 132 1.93e-14 73.6
Msa1271350 AT2G02820.1 35.398 113 69 3 9 121 24 132 2.76e-14 73.2
Msa1271350 AT2G02820.3 35.088 114 70 3 8 121 23 132 3.55e-14 72.0
Msa1271350 AT1G22640.3 45.679 81 41 2 61 141 1 78 7.37e-14 69.3
Msa1271350 AT3G23250.2 32.484 157 93 5 61 209 1 152 1.01e-12 66.6
Msa1271350 AT1G66380.2 35.714 98 61 2 15 111 8 104 4.64e-12 62.0
Msa1271350 AT5G59780.1 47.368 57 30 0 74 130 1 57 2.45e-11 61.6
Msa1271350 AT3G18100.1 37.500 104 63 2 9 112 538 639 2.57e-11 64.7
Msa1271350 AT1G18960.1 34.286 105 59 3 17 118 10 107 2.69e-11 63.5
Msa1271350 AT5G14750.4 50.000 54 26 1 61 114 1 53 3.10e-11 60.8
Msa1271350 AT5G14750.2 50.000 54 26 1 61 114 1 53 3.10e-11 60.8
Msa1271350 AT3G46130.2 50.000 48 24 0 74 121 1 48 3.36e-11 61.6
Msa1271350 AT3G18100.3 37.500 104 63 2 9 112 490 591 4.18e-11 63.9
Msa1271350 AT3G18100.4 37.500 104 63 2 9 112 377 478 4.20e-11 63.9
Msa1271350 AT3G18100.2 37.500 104 63 2 9 112 325 426 4.76e-11 63.5
Msa1271350 AT1G71030.2 43.077 65 36 1 54 118 5 68 5.74e-11 60.8
Msa1271350 AT1G71030.1 43.077 65 36 1 54 118 19 82 7.11e-11 60.8

Find 58 sgRNAs with CRISPR-Local

Find 234 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTGTTCTTCCTGGTAAAT+AGG 0.261776 8_3:-4877011 None:intergenic
GTAAAATCAGTTTCGAGTTC+TGG 0.265895 8_3:-4877624 None:intergenic
ACAATGATGTCAAGAATTTC+TGG 0.266147 8_3:+4877032 Msa1271350:CDS
ATAGAATTGCAGGAACAATT+TGG 0.279339 8_3:+4876965 Msa1271350:CDS
GATGAGGAACTGAACTTATA+AGG 0.293723 8_3:-4877402 None:intergenic
ACATCATTGTCTGTTCTTCC+TGG 0.301376 8_3:-4877019 None:intergenic
TTCCGATCAAGTTATCAAAA+TGG 0.309350 8_3:+4877479 Msa1271350:CDS
GAGGATTGTGATAGAATTGC+AGG 0.342837 8_3:+4876955 Msa1271350:CDS
GCAAGTCTTGTCGTCTTCGT+TGG 0.346401 8_3:+4876153 Msa1271350:CDS
TCAATGCATGGTAATGAATA+TGG 0.359559 8_3:-4877453 None:intergenic
CCCTTGGAAACATCTGAGTT+TGG 0.377212 8_3:+4877696 Msa1271350:CDS
CAAAATTTATTTGATGTGTT+TGG 0.378842 8_3:+4877672 Msa1271350:CDS
CTTCATAATTCAGAGCTTAG+AGG 0.387043 8_3:-4877820 None:intergenic
AGGAACAATTTGGAAACAAA+TGG 0.388989 8_3:+4876975 Msa1271350:CDS
AGTTCTTTGAAGAAGACCTT+TGG 0.401175 8_3:-4876129 None:intergenic
ATTTGATGTGTTTGGTCCCT+TGG 0.403712 8_3:+4877680 Msa1271350:CDS
CAAGTCTTGTCGTCTTCGTT+GGG 0.415472 8_3:+4876154 Msa1271350:CDS
CGAATGGAGCTCCAATCTCT+TGG 0.416244 8_3:-4876104 None:intergenic
CTTTGATAGCTCTGATCAAA+AGG 0.418845 8_3:-4877573 None:intergenic
AAAGGTCTTCTTCAAAGAAC+TGG 0.425042 8_3:+4876131 Msa1271350:CDS
ACGTAATTCGCATCGAAACT+AGG 0.435618 8_3:-4877534 None:intergenic
CTTCATCATGTGAAGAAGTA+TGG 0.445060 8_3:+4876080 Msa1271350:CDS
AGAAGTATGGTCCAAGAGAT+TGG 0.451426 8_3:+4876093 Msa1271350:CDS
TATCAAAATGGTTCCACTGT+TGG 0.461276 8_3:+4877491 Msa1271350:CDS
ATGTGATCAAACATGTCCTC+TGG 0.462287 8_3:-4877780 None:intergenic
TGTTCATCAACTCTTTCCAT+TGG 0.465631 8_3:-4877651 None:intergenic
AAGAAGACCTTTGGATCGAA+TGG 0.469841 8_3:-4876120 None:intergenic
TGGTAAATAGGATGCAATCT+TGG 0.487125 8_3:-4876999 None:intergenic
CGCATCGAAACTAGGTTGCT+CGG 0.492075 8_3:-4877526 None:intergenic
TGGAACACGGGAAGAAACTT+TGG 0.494230 8_3:-4877131 None:intergenic
GGAACAATTTGGAAACAAAT+GGG 0.516278 8_3:+4876976 Msa1271350:CDS
AGAAAGATCAAGAGCACGTA+AGG 0.526200 8_3:+4876021 Msa1271350:CDS
GTAGACAAAAGAGGTTGGCT+AGG 0.535031 8_3:+4877059 Msa1271350:CDS
CATGGTAATGAATATGGTTG+AGG 0.536436 8_3:-4877447 None:intergenic
GGAAACATCTGAGTTTGGAA+TGG 0.540896 8_3:+4877701 Msa1271350:CDS
TTTGATAGCTCTGATCAAAA+GGG 0.542008 8_3:-4877572 None:intergenic
CTGAGGAAATGCAATGTGTT+CGG 0.543961 8_3:-4877598 None:intergenic
TCTGGAGCAGTAGACAAAAG+AGG 0.552690 8_3:+4877050 Msa1271350:CDS
AAGATTGCATCCTATTTACC+AGG 0.556707 8_3:+4877001 Msa1271350:CDS
TTCATAATTCAGAGCTTAGA+GGG 0.556748 8_3:-4877819 None:intergenic
TCCAAACTCAGATGTTTCCA+AGG 0.561882 8_3:-4877697 None:intergenic
TAAGTTCAGTTCCTCATCAG+AGG 0.567214 8_3:+4877407 Msa1271350:CDS
AGCACGTAAGGAAAGGTCCA+TGG 0.568999 8_3:+4876033 Msa1271350:CDS
TGGAGCTCCATTCGATCCAA+AGG 0.580870 8_3:+4876113 Msa1271350:CDS
AAGTTCAGTTCCTCATCAGA+GGG 0.590582 8_3:+4877408 Msa1271350:CDS
TGATCGGAATTCTCAATGCA+TGG 0.593071 8_3:-4877465 None:intergenic
GTTTCGAGTTCTGGAATCTG+AGG 0.593864 8_3:-4877615 None:intergenic
AGTTTACAATCGAGGAAGAG+AGG 0.597675 8_3:+4876936 Msa1271350:CDS
GATCAAGAGCACGTAAGGAA+AGG 0.598487 8_3:+4876026 Msa1271350:CDS
GAGCAGTAGACAAAAGAGGT+TGG 0.607200 8_3:+4877054 Msa1271350:CDS
TGATGCTTCTCCCTCTGATG+AGG 0.607465 8_3:-4877418 None:intergenic
AGCTTAGAGGGATTTGAATG+TGG 0.609877 8_3:-4877807 None:intergenic
TTCCCGTGTTCCATCTCACG+AGG 0.618226 8_3:+4877141 Msa1271350:CDS
CCAAACTCAGATGTTTCCAA+GGG 0.635161 8_3:-4877696 None:intergenic
TTACCTCGTGAGATGGAACA+CGG 0.643501 8_3:-4877144 None:intergenic
TTGATAGCTCTGATCAAAAG+GGG 0.650518 8_3:-4877571 None:intergenic
TGGGTGCAAGTTTACAATCG+AGG 0.667952 8_3:+4876928 Msa1271350:CDS
TACCTCGTGAGATGGAACAC+GGG 0.696461 8_3:-4877143 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCAAATTAATTATTTGAT+GGG + chr8_3:4876849-4876868 Msa1271350:intron 10.0%
!!! AATTCTTATATTTTTATTGA+AGG + chr8_3:4877377-4877396 Msa1271350:intron 10.0%
!! ATTCAAATTAATTATTTGAT+GGG + chr8_3:4876849-4876868 Msa1271350:intron 10.0%
!!! AATTCTTATATTTTTATTGA+AGG + chr8_3:4877377-4877396 Msa1271350:intron 10.0%
!! TTAAAATTATAAACAATCGA+TGG - chr8_3:4876607-4876626 None:intergenic 15.0%
!!! CATCAAATAATTAATTTGAA+TGG - chr8_3:4876850-4876869 None:intergenic 15.0%
!! CATTCAAATTAATTATTTGA+TGG + chr8_3:4876848-4876867 Msa1271350:intron 15.0%
!!! TTAAATATTGAGTTTGAAAT+CGG - chr8_3:4877263-4877282 None:intergenic 15.0%
!!! TATAAGAATTTTAGAGAAAA+CGG - chr8_3:4877367-4877386 None:intergenic 15.0%
!! TTAAAATTATAAACAATCGA+TGG - chr8_3:4876607-4876626 None:intergenic 15.0%
!!! CATCAAATAATTAATTTGAA+TGG - chr8_3:4876850-4876869 None:intergenic 15.0%
!! CATTCAAATTAATTATTTGA+TGG + chr8_3:4876848-4876867 Msa1271350:intron 15.0%
!!! TTAAATATTGAGTTTGAAAT+CGG - chr8_3:4877263-4877282 None:intergenic 15.0%
!!! TATAAGAATTTTAGAGAAAA+CGG - chr8_3:4877367-4877386 None:intergenic 15.0%
!!! TAAGAATAACATACTTTTTG+AGG - chr8_3:4876199-4876218 None:intergenic 20.0%
!! TTGGAAAATATAATTCGTTT+CGG + chr8_3:4876397-4876416 Msa1271350:intron 20.0%
!! TATGAAAATTTACAACCATA+TGG + chr8_3:4876428-4876447 Msa1271350:intron 20.0%
!! ATGAAAATTTACAACCATAT+GGG + chr8_3:4876429-4876448 Msa1271350:intron 20.0%
!! TAAATATGAAATTTCCTTCA+TGG + chr8_3:4876492-4876511 Msa1271350:intron 20.0%
!! AAATATGAAATTTCCTTCAT+GGG + chr8_3:4876493-4876512 Msa1271350:intron 20.0%
!!! TTATTTGATTTTTGTGTTTC+TGG + chr8_3:4876891-4876910 Msa1271350:intron 20.0%
!! CAAAATTTATTTGATGTGTT+TGG + chr8_3:4877672-4877691 Msa1271350:CDS 20.0%
!!! TAAGAATAACATACTTTTTG+AGG - chr8_3:4876199-4876218 None:intergenic 20.0%
!! TTGGAAAATATAATTCGTTT+CGG + chr8_3:4876397-4876416 Msa1271350:intron 20.0%
!! TATGAAAATTTACAACCATA+TGG + chr8_3:4876428-4876447 Msa1271350:intron 20.0%
!! ATGAAAATTTACAACCATAT+GGG + chr8_3:4876429-4876448 Msa1271350:intron 20.0%
!! TAAATATGAAATTTCCTTCA+TGG + chr8_3:4876492-4876511 Msa1271350:intron 20.0%
!! AAATATGAAATTTCCTTCAT+GGG + chr8_3:4876493-4876512 Msa1271350:intron 20.0%
!!! TTATTTGATTTTTGTGTTTC+TGG + chr8_3:4876891-4876910 Msa1271350:intron 20.0%
!! CAAAATTTATTTGATGTGTT+TGG + chr8_3:4877672-4877691 Msa1271350:CDS 20.0%
! AGAAGAAAAAGAAAAATGCA+TGG + chr8_3:4875996-4876015 Msa1271350:CDS 25.0%
! GAAGAAAAAGAAAAATGCAT+GGG + chr8_3:4875997-4876016 Msa1271350:CDS 25.0%
!!! ATAACATACTTTTTGAGGTT+TGG - chr8_3:4876194-4876213 None:intergenic 25.0%
! TGAAAATTTACAACCATATG+GGG + chr8_3:4876430-4876449 Msa1271350:intron 25.0%
! TAACACACTTACATAATACA+CGG + chr8_3:4876624-4876643 Msa1271350:intron 25.0%
! ACTGATAATAACATGAGAAA+CGG - chr8_3:4876692-4876711 None:intergenic 25.0%
!!! AGTTGTTTTAAGTGTATGTT+TGG + chr8_3:4876809-4876828 Msa1271350:intron 25.0%
! GAGGTAATTAAAAAACACAA+AGG + chr8_3:4877160-4877179 Msa1271350:intron 25.0%
!!! TCTTGTCCTTTCTTTTAATT+CGG + chr8_3:4877193-4877212 Msa1271350:intron 25.0%
! AATATATGATCCTGATCTAA+TGG + chr8_3:4877296-4877315 Msa1271350:intron 25.0%
!!! AACCATTTTGATAACTTGAT+CGG - chr8_3:4877484-4877503 None:intergenic 25.0%
! AGAAGAAAAAGAAAAATGCA+TGG + chr8_3:4875996-4876015 Msa1271350:CDS 25.0%
! GAAGAAAAAGAAAAATGCAT+GGG + chr8_3:4875997-4876016 Msa1271350:CDS 25.0%
!!! ATAACATACTTTTTGAGGTT+TGG - chr8_3:4876194-4876213 None:intergenic 25.0%
! TGAAAATTTACAACCATATG+GGG + chr8_3:4876430-4876449 Msa1271350:intron 25.0%
! TAACACACTTACATAATACA+CGG + chr8_3:4876624-4876643 Msa1271350:intron 25.0%
! ACTGATAATAACATGAGAAA+CGG - chr8_3:4876692-4876711 None:intergenic 25.0%
!!! AGTTGTTTTAAGTGTATGTT+TGG + chr8_3:4876809-4876828 Msa1271350:intron 25.0%
! GAGGTAATTAAAAAACACAA+AGG + chr8_3:4877160-4877179 Msa1271350:intron 25.0%
!!! TCTTGTCCTTTCTTTTAATT+CGG + chr8_3:4877193-4877212 Msa1271350:intron 25.0%
! AATATATGATCCTGATCTAA+TGG + chr8_3:4877296-4877315 Msa1271350:intron 25.0%
!!! AACCATTTTGATAACTTGAT+CGG - chr8_3:4877484-4877503 None:intergenic 25.0%
TGTCAGACATATCAATGTTT+CGG - chr8_3:4876302-4876321 None:intergenic 30.0%
!! AATGTTTTTGCTTCATTGCT+TGG + chr8_3:4876378-4876397 Msa1271350:intron 30.0%
TCACTAATCACTTGTAGTAA+AGG - chr8_3:4876538-4876557 None:intergenic 30.0%
ATAAACAATCGATGGAGAAT+AGG - chr8_3:4876599-4876618 None:intergenic 30.0%
! TTTTCGTGATGATACAAAGA+TGG + chr8_3:4876772-4876791 Msa1271350:intron 30.0%
GATACAAAGATGGAGTAAAT+TGG + chr8_3:4876782-4876801 Msa1271350:intron 30.0%
!!! TTTGATGGGTTTTCATTGAT+TGG + chr8_3:4876863-4876882 Msa1271350:intron 30.0%
ATAGAATTGCAGGAACAATT+TGG + chr8_3:4876965-4876984 Msa1271350:CDS 30.0%
AGGAACAATTTGGAAACAAA+TGG + chr8_3:4876975-4876994 Msa1271350:CDS 30.0%
GGAACAATTTGGAAACAAAT+GGG + chr8_3:4876976-4876995 Msa1271350:CDS 30.0%
ACAATGATGTCAAGAATTTC+TGG + chr8_3:4877032-4877051 Msa1271350:CDS 30.0%
!!! TTTGTTTTTGTGTGACTTTG+AGG - chr8_3:4877110-4877129 None:intergenic 30.0%
!! TTTTTAATTACCTCGTGAGA+TGG - chr8_3:4877154-4877173 None:intergenic 30.0%
!! CTTGTCCTTTCTTTTAATTC+GGG + chr8_3:4877194-4877213 Msa1271350:intron 30.0%
AGTAGTCATTGGATCAAAAT+TGG + chr8_3:4877231-4877250 Msa1271350:intron 30.0%
! TCAATGCATGGTAATGAATA+TGG - chr8_3:4877456-4877475 None:intergenic 30.0%
TTCCGATCAAGTTATCAAAA+TGG + chr8_3:4877479-4877498 Msa1271350:CDS 30.0%
!!! GATTTTTTAAGATCCAACAG+TGG - chr8_3:4877507-4877526 None:intergenic 30.0%
!! TTTGATAGCTCTGATCAAAA+GGG - chr8_3:4877575-4877594 None:intergenic 30.0%
!! AACTGATTTTACGTTTCCAA+TGG + chr8_3:4877635-4877654 Msa1271350:CDS 30.0%
!! TTTCTTTGATGATTTTCCAG+AGG + chr8_3:4877764-4877783 Msa1271350:CDS 30.0%
TGTCAGACATATCAATGTTT+CGG - chr8_3:4876302-4876321 None:intergenic 30.0%
!! AATGTTTTTGCTTCATTGCT+TGG + chr8_3:4876378-4876397 Msa1271350:intron 30.0%
TCACTAATCACTTGTAGTAA+AGG - chr8_3:4876538-4876557 None:intergenic 30.0%
ATAAACAATCGATGGAGAAT+AGG - chr8_3:4876599-4876618 None:intergenic 30.0%
! TTTTCGTGATGATACAAAGA+TGG + chr8_3:4876772-4876791 Msa1271350:intron 30.0%
GATACAAAGATGGAGTAAAT+TGG + chr8_3:4876782-4876801 Msa1271350:intron 30.0%
!!! TTTGATGGGTTTTCATTGAT+TGG + chr8_3:4876863-4876882 Msa1271350:intron 30.0%
ATAGAATTGCAGGAACAATT+TGG + chr8_3:4876965-4876984 Msa1271350:CDS 30.0%
AGGAACAATTTGGAAACAAA+TGG + chr8_3:4876975-4876994 Msa1271350:CDS 30.0%
GGAACAATTTGGAAACAAAT+GGG + chr8_3:4876976-4876995 Msa1271350:CDS 30.0%
ACAATGATGTCAAGAATTTC+TGG + chr8_3:4877032-4877051 Msa1271350:CDS 30.0%
!!! TTTGTTTTTGTGTGACTTTG+AGG - chr8_3:4877110-4877129 None:intergenic 30.0%
!! TTTTTAATTACCTCGTGAGA+TGG - chr8_3:4877154-4877173 None:intergenic 30.0%
!! CTTGTCCTTTCTTTTAATTC+GGG + chr8_3:4877194-4877213 Msa1271350:intron 30.0%
AGTAGTCATTGGATCAAAAT+TGG + chr8_3:4877231-4877250 Msa1271350:intron 30.0%
! TCAATGCATGGTAATGAATA+TGG - chr8_3:4877456-4877475 None:intergenic 30.0%
TTCCGATCAAGTTATCAAAA+TGG + chr8_3:4877479-4877498 Msa1271350:CDS 30.0%
!!! GATTTTTTAAGATCCAACAG+TGG - chr8_3:4877507-4877526 None:intergenic 30.0%
!! TTTGATAGCTCTGATCAAAA+GGG - chr8_3:4877575-4877594 None:intergenic 30.0%
!! AACTGATTTTACGTTTCCAA+TGG + chr8_3:4877635-4877654 Msa1271350:CDS 30.0%
!! TTTCTTTGATGATTTTCCAG+AGG + chr8_3:4877764-4877783 Msa1271350:CDS 30.0%
! TCATCTTCTTCTGTTTTCCA+TGG - chr8_3:4876053-4876072 None:intergenic 35.0%
CTTCATCATGTGAAGAAGTA+TGG + chr8_3:4876080-4876099 Msa1271350:CDS 35.0%
! AGTTCTTTGAAGAAGACCTT+TGG - chr8_3:4876132-4876151 None:intergenic 35.0%
AAAGGTCTTCTTCAAAGAAC+TGG + chr8_3:4876131-4876150 Msa1271350:CDS 35.0%
AAAAATGAGACAACCCATGA+AGG - chr8_3:4876509-4876528 None:intergenic 35.0%
!! CATGGGTTGTCTCATTTTTA+TGG + chr8_3:4876510-4876529 Msa1271350:intron 35.0%
AACGGAATAAATGAATGCGT+CGG - chr8_3:4876674-4876693 None:intergenic 35.0%
TGGTAAATAGGATGCAATCT+TGG - chr8_3:4877002-4877021 None:intergenic 35.0%
AAGATTGCATCCTATTTACC+AGG + chr8_3:4877001-4877020 Msa1271350:CDS 35.0%
GATGAGGAACTGAACTTATA+AGG - chr8_3:4877405-4877424 None:intergenic 35.0%
! CATGGTAATGAATATGGTTG+AGG - chr8_3:4877450-4877469 None:intergenic 35.0%
TATCAAAATGGTTCCACTGT+TGG + chr8_3:4877491-4877510 Msa1271350:CDS 35.0%
!! TTGATAGCTCTGATCAAAAG+GGG - chr8_3:4877574-4877593 None:intergenic 35.0%
!! CTTTGATAGCTCTGATCAAA+AGG - chr8_3:4877576-4877595 None:intergenic 35.0%
!! GTAAAATCAGTTTCGAGTTC+TGG - chr8_3:4877627-4877646 None:intergenic 35.0%
TGTTCATCAACTCTTTCCAT+TGG - chr8_3:4877654-4877673 None:intergenic 35.0%
!!! TTCCTTTTTTTGAGCCATCA+GGG + chr8_3:4877724-4877743 Msa1271350:CDS 35.0%
!!! TCAATTTTGAAACTCCCTGA+TGG - chr8_3:4877741-4877760 None:intergenic 35.0%
! TCATCTTCTTCTGTTTTCCA+TGG - chr8_3:4876053-4876072 None:intergenic 35.0%
CTTCATCATGTGAAGAAGTA+TGG + chr8_3:4876080-4876099 Msa1271350:CDS 35.0%
! AGTTCTTTGAAGAAGACCTT+TGG - chr8_3:4876132-4876151 None:intergenic 35.0%
AAAGGTCTTCTTCAAAGAAC+TGG + chr8_3:4876131-4876150 Msa1271350:CDS 35.0%
AAAAATGAGACAACCCATGA+AGG - chr8_3:4876509-4876528 None:intergenic 35.0%
!! CATGGGTTGTCTCATTTTTA+TGG + chr8_3:4876510-4876529 Msa1271350:intron 35.0%
AACGGAATAAATGAATGCGT+CGG - chr8_3:4876674-4876693 None:intergenic 35.0%
TGGTAAATAGGATGCAATCT+TGG - chr8_3:4877002-4877021 None:intergenic 35.0%
AAGATTGCATCCTATTTACC+AGG + chr8_3:4877001-4877020 Msa1271350:CDS 35.0%
GATGAGGAACTGAACTTATA+AGG - chr8_3:4877405-4877424 None:intergenic 35.0%
! CATGGTAATGAATATGGTTG+AGG - chr8_3:4877450-4877469 None:intergenic 35.0%
TATCAAAATGGTTCCACTGT+TGG + chr8_3:4877491-4877510 Msa1271350:CDS 35.0%
!! TTGATAGCTCTGATCAAAAG+GGG - chr8_3:4877574-4877593 None:intergenic 35.0%
!! CTTTGATAGCTCTGATCAAA+AGG - chr8_3:4877576-4877595 None:intergenic 35.0%
!! GTAAAATCAGTTTCGAGTTC+TGG - chr8_3:4877627-4877646 None:intergenic 35.0%
TGTTCATCAACTCTTTCCAT+TGG - chr8_3:4877654-4877673 None:intergenic 35.0%
!!! TTCCTTTTTTTGAGCCATCA+GGG + chr8_3:4877724-4877743 Msa1271350:CDS 35.0%
!!! TCAATTTTGAAACTCCCTGA+TGG - chr8_3:4877741-4877760 None:intergenic 35.0%
! AGAAAGATCAAGAGCACGTA+AGG + chr8_3:4876021-4876040 Msa1271350:CDS 40.0%
! AGAAGTATGGTCCAAGAGAT+TGG + chr8_3:4876093-4876112 Msa1271350:CDS 40.0%
AAGAAGACCTTTGGATCGAA+TGG - chr8_3:4876123-4876142 None:intergenic 40.0%
CATTAAGAAGCAACCCCATA+TGG - chr8_3:4876446-4876465 None:intergenic 40.0%
GTAGCACACAACACAAACAT+TGG - chr8_3:4876742-4876761 None:intergenic 40.0%
AGTTTACAATCGAGGAAGAG+AGG + chr8_3:4876936-4876955 Msa1271350:CDS 40.0%
GAGGATTGTGATAGAATTGC+AGG + chr8_3:4876955-4876974 Msa1271350:CDS 40.0%
GTCTGTTCTTCCTGGTAAAT+AGG - chr8_3:4877014-4877033 None:intergenic 40.0%
ACATCATTGTCTGTTCTTCC+TGG - chr8_3:4877022-4877041 None:intergenic 40.0%
TGATCCAATGACTACTGATG+TGG - chr8_3:4877227-4877246 None:intergenic 40.0%
ACATATGCAGCCATTAGATC+AGG - chr8_3:4877309-4877328 None:intergenic 40.0%
TAAGTTCAGTTCCTCATCAG+AGG + chr8_3:4877407-4877426 Msa1271350:CDS 40.0%
AAGTTCAGTTCCTCATCAGA+GGG + chr8_3:4877408-4877427 Msa1271350:CDS 40.0%
TGATCGGAATTCTCAATGCA+TGG - chr8_3:4877468-4877487 None:intergenic 40.0%
ACGTAATTCGCATCGAAACT+AGG - chr8_3:4877537-4877556 None:intergenic 40.0%
CTGAGGAAATGCAATGTGTT+CGG - chr8_3:4877601-4877620 None:intergenic 40.0%
ATTTGATGTGTTTGGTCCCT+TGG + chr8_3:4877680-4877699 Msa1271350:CDS 40.0%
CCAAACTCAGATGTTTCCAA+GGG - chr8_3:4877699-4877718 None:intergenic 40.0%
TCCAAACTCAGATGTTTCCA+AGG - chr8_3:4877700-4877719 None:intergenic 40.0%
GGAAACATCTGAGTTTGGAA+TGG + chr8_3:4877701-4877720 Msa1271350:CDS 40.0%
!!! GTTCCTTTTTTTGAGCCATC+AGG + chr8_3:4877723-4877742 Msa1271350:CDS 40.0%
ATGTGATCAAACATGTCCTC+TGG - chr8_3:4877783-4877802 None:intergenic 40.0%
AGCTTAGAGGGATTTGAATG+TGG - chr8_3:4877810-4877829 None:intergenic 40.0%
! AGAAAGATCAAGAGCACGTA+AGG + chr8_3:4876021-4876040 Msa1271350:CDS 40.0%
! AGAAGTATGGTCCAAGAGAT+TGG + chr8_3:4876093-4876112 Msa1271350:CDS 40.0%
AAGAAGACCTTTGGATCGAA+TGG - chr8_3:4876123-4876142 None:intergenic 40.0%
CATTAAGAAGCAACCCCATA+TGG - chr8_3:4876446-4876465 None:intergenic 40.0%
GTAGCACACAACACAAACAT+TGG - chr8_3:4876742-4876761 None:intergenic 40.0%
AGTTTACAATCGAGGAAGAG+AGG + chr8_3:4876936-4876955 Msa1271350:CDS 40.0%
GAGGATTGTGATAGAATTGC+AGG + chr8_3:4876955-4876974 Msa1271350:CDS 40.0%
GTCTGTTCTTCCTGGTAAAT+AGG - chr8_3:4877014-4877033 None:intergenic 40.0%
ACATCATTGTCTGTTCTTCC+TGG - chr8_3:4877022-4877041 None:intergenic 40.0%
TGATCCAATGACTACTGATG+TGG - chr8_3:4877227-4877246 None:intergenic 40.0%
ACATATGCAGCCATTAGATC+AGG - chr8_3:4877309-4877328 None:intergenic 40.0%
TAAGTTCAGTTCCTCATCAG+AGG + chr8_3:4877407-4877426 Msa1271350:CDS 40.0%
AAGTTCAGTTCCTCATCAGA+GGG + chr8_3:4877408-4877427 Msa1271350:CDS 40.0%
TGATCGGAATTCTCAATGCA+TGG - chr8_3:4877468-4877487 None:intergenic 40.0%
ACGTAATTCGCATCGAAACT+AGG - chr8_3:4877537-4877556 None:intergenic 40.0%
CTGAGGAAATGCAATGTGTT+CGG - chr8_3:4877601-4877620 None:intergenic 40.0%
ATTTGATGTGTTTGGTCCCT+TGG + chr8_3:4877680-4877699 Msa1271350:CDS 40.0%
CCAAACTCAGATGTTTCCAA+GGG - chr8_3:4877699-4877718 None:intergenic 40.0%
TCCAAACTCAGATGTTTCCA+AGG - chr8_3:4877700-4877719 None:intergenic 40.0%
GGAAACATCTGAGTTTGGAA+TGG + chr8_3:4877701-4877720 Msa1271350:CDS 40.0%
!!! GTTCCTTTTTTTGAGCCATC+AGG + chr8_3:4877723-4877742 Msa1271350:CDS 40.0%
ATGTGATCAAACATGTCCTC+TGG - chr8_3:4877783-4877802 None:intergenic 40.0%
AGCTTAGAGGGATTTGAATG+TGG - chr8_3:4877810-4877829 None:intergenic 40.0%
! GATCAAGAGCACGTAAGGAA+AGG + chr8_3:4876026-4876045 Msa1271350:CDS 45.0%
! CAAGTCTTGTCGTCTTCGTT+GGG + chr8_3:4876154-4876173 Msa1271350:CDS 45.0%
! TTCTGGTCTCTCTCTGAAAG+TGG + chr8_3:4876908-4876927 Msa1271350:intron 45.0%
! TCTGGTCTCTCTCTGAAAGT+GGG + chr8_3:4876909-4876928 Msa1271350:intron 45.0%
TGGGTGCAAGTTTACAATCG+AGG + chr8_3:4876928-4876947 Msa1271350:CDS 45.0%
! TCTGGAGCAGTAGACAAAAG+AGG + chr8_3:4877050-4877069 Msa1271350:CDS 45.0%
GAGCAGTAGACAAAAGAGGT+TGG + chr8_3:4877054-4877073 Msa1271350:CDS 45.0%
! GTAGACAAAAGAGGTTGGCT+AGG + chr8_3:4877059-4877078 Msa1271350:CDS 45.0%
TGGAACACGGGAAGAAACTT+TGG - chr8_3:4877134-4877153 None:intergenic 45.0%
TTACCTCGTGAGATGGAACA+CGG - chr8_3:4877147-4877166 None:intergenic 45.0%
GAGGGCCCGAATTAAAAGAA+AGG - chr8_3:4877202-4877221 None:intergenic 45.0%
ATGACTACTGATGTGGCTGA+GGG - chr8_3:4877220-4877239 None:intergenic 45.0%
AATGACTACTGATGTGGCTG+AGG - chr8_3:4877221-4877240 None:intergenic 45.0%
TCAGCCACATCAGTAGTCAT+TGG + chr8_3:4877220-4877239 Msa1271350:intron 45.0%
TGTAACTTCCCGCTTGAATG+CGG + chr8_3:4877326-4877345 Msa1271350:intron 45.0%
AATTCGTTCCCGCATTCAAG+CGG - chr8_3:4877338-4877357 None:intergenic 45.0%
!! GTTTCGAGTTCTGGAATCTG+AGG - chr8_3:4877618-4877637 None:intergenic 45.0%
CCCTTGGAAACATCTGAGTT+TGG + chr8_3:4877696-4877715 Msa1271350:CDS 45.0%
CTCCCTGATGGCTCAAAAAA+AGG - chr8_3:4877729-4877748 None:intergenic 45.0%
! GATCAAGAGCACGTAAGGAA+AGG + chr8_3:4876026-4876045 Msa1271350:CDS 45.0%
! CAAGTCTTGTCGTCTTCGTT+GGG + chr8_3:4876154-4876173 Msa1271350:CDS 45.0%
! TTCTGGTCTCTCTCTGAAAG+TGG + chr8_3:4876908-4876927 Msa1271350:intron 45.0%
! TCTGGTCTCTCTCTGAAAGT+GGG + chr8_3:4876909-4876928 Msa1271350:intron 45.0%
TGGGTGCAAGTTTACAATCG+AGG + chr8_3:4876928-4876947 Msa1271350:CDS 45.0%
! TCTGGAGCAGTAGACAAAAG+AGG + chr8_3:4877050-4877069 Msa1271350:CDS 45.0%
GAGCAGTAGACAAAAGAGGT+TGG + chr8_3:4877054-4877073 Msa1271350:CDS 45.0%
! GTAGACAAAAGAGGTTGGCT+AGG + chr8_3:4877059-4877078 Msa1271350:CDS 45.0%
TGGAACACGGGAAGAAACTT+TGG - chr8_3:4877134-4877153 None:intergenic 45.0%
TTACCTCGTGAGATGGAACA+CGG - chr8_3:4877147-4877166 None:intergenic 45.0%
GAGGGCCCGAATTAAAAGAA+AGG - chr8_3:4877202-4877221 None:intergenic 45.0%
ATGACTACTGATGTGGCTGA+GGG - chr8_3:4877220-4877239 None:intergenic 45.0%
AATGACTACTGATGTGGCTG+AGG - chr8_3:4877221-4877240 None:intergenic 45.0%
TCAGCCACATCAGTAGTCAT+TGG + chr8_3:4877220-4877239 Msa1271350:intron 45.0%
TGTAACTTCCCGCTTGAATG+CGG + chr8_3:4877326-4877345 Msa1271350:intron 45.0%
AATTCGTTCCCGCATTCAAG+CGG - chr8_3:4877338-4877357 None:intergenic 45.0%
!! GTTTCGAGTTCTGGAATCTG+AGG - chr8_3:4877618-4877637 None:intergenic 45.0%
CCCTTGGAAACATCTGAGTT+TGG + chr8_3:4877696-4877715 Msa1271350:CDS 45.0%
CTCCCTGATGGCTCAAAAAA+AGG - chr8_3:4877729-4877748 None:intergenic 45.0%
AGCACGTAAGGAAAGGTCCA+TGG + chr8_3:4876033-4876052 Msa1271350:CDS 50.0%
CGAATGGAGCTCCAATCTCT+TGG - chr8_3:4876107-4876126 None:intergenic 50.0%
TGGAGCTCCATTCGATCCAA+AGG + chr8_3:4876113-4876132 Msa1271350:CDS 50.0%
! GCAAGTCTTGTCGTCTTCGT+TGG + chr8_3:4876153-4876172 Msa1271350:CDS 50.0%
TACCTCGTGAGATGGAACAC+GGG - chr8_3:4877146-4877165 None:intergenic 50.0%
GTAACTTCCCGCTTGAATGC+GGG + chr8_3:4877327-4877346 Msa1271350:intron 50.0%
ATTCGTTCCCGCATTCAAGC+GGG - chr8_3:4877337-4877356 None:intergenic 50.0%
TGATGCTTCTCCCTCTGATG+AGG - chr8_3:4877421-4877440 None:intergenic 50.0%
CGCATCGAAACTAGGTTGCT+CGG - chr8_3:4877529-4877548 None:intergenic 50.0%
AGCACGTAAGGAAAGGTCCA+TGG + chr8_3:4876033-4876052 Msa1271350:CDS 50.0%
CGAATGGAGCTCCAATCTCT+TGG - chr8_3:4876107-4876126 None:intergenic 50.0%
TGGAGCTCCATTCGATCCAA+AGG + chr8_3:4876113-4876132 Msa1271350:CDS 50.0%
! GCAAGTCTTGTCGTCTTCGT+TGG + chr8_3:4876153-4876172 Msa1271350:CDS 50.0%
TACCTCGTGAGATGGAACAC+GGG - chr8_3:4877146-4877165 None:intergenic 50.0%
GTAACTTCCCGCTTGAATGC+GGG + chr8_3:4877327-4877346 Msa1271350:intron 50.0%
ATTCGTTCCCGCATTCAAGC+GGG - chr8_3:4877337-4877356 None:intergenic 50.0%
TGATGCTTCTCCCTCTGATG+AGG - chr8_3:4877421-4877440 None:intergenic 50.0%
CGCATCGAAACTAGGTTGCT+CGG - chr8_3:4877529-4877548 None:intergenic 50.0%
TTCCCGTGTTCCATCTCACG+AGG + chr8_3:4877141-4877160 Msa1271350:CDS 55.0%
TTCCCGTGTTCCATCTCACG+AGG + chr8_3:4877141-4877160 Msa1271350:CDS 55.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 4875996 4877833 4875996 ID=Msa1271350;Name=Msa1271350
chr8_3 mRNA 4875996 4877833 4875996 ID=Msa1271350-mRNA-1;Parent=Msa1271350;Name=Msa1271350-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|3|0|292
chr8_3 exon 4875996 4876204 4875996 ID=Msa1271350-mRNA-1:exon:1638;Parent=Msa1271350-mRNA-1
chr8_3 exon 4876928 4877162 4876928 ID=Msa1271350-mRNA-1:exon:1639;Parent=Msa1271350-mRNA-1
chr8_3 exon 4877399 4877833 4877399 ID=Msa1271350-mRNA-1:exon:1640;Parent=Msa1271350-mRNA-1
chr8_3 CDS 4875996 4876204 4875996 ID=Msa1271350-mRNA-1:cds;Parent=Msa1271350-mRNA-1
chr8_3 CDS 4876928 4877162 4876928 ID=Msa1271350-mRNA-1:cds;Parent=Msa1271350-mRNA-1
chr8_3 CDS 4877399 4877833 4877399 ID=Msa1271350-mRNA-1:cds;Parent=Msa1271350-mRNA-1
Gene Sequence

>Msa1271350

AGAAGAAAAAGAAAAATGCATGGGAAGAAAGATCAAGAGCACGTAAGGAAAGGTCCATGGAAAACAGAAGAAGATGAAGTGTTACTTCATCATGTGAAGAAGTATGGTCCAAGAGATTGGAGCTCCATTCGATCCAAAGGTCTTCTTCAAAGAACTGGCAAGTCTTGTCGTCTTCGTTGGGTCAATAAACTTCGACCAAACCTCAAAAATGGGTGCAAGTTTACAATCGAGGAAGAGAGGATTGTGATAGAATTGCAGGAACAATTTGGAAACAAATGGGCCAAGATTGCATCCTATTTACCAGGAAGAACAGACAATGATGTCAAGAATTTCTGGAGCAGTAGACAAAAGAGGTTGGCTAGGCTTCTCAAAACATCATCGTCAACAACCTCAAAGTCACACAAAAACAAAGCCAAAGTTTCTTCCCGTGTTCCATCTCACGAGGTTCCTTATAAGTTCAGTTCCTCATCAGAGGGAGAAGCATCATCAAAACCTCAACCATATTCATTACCATGCATTGAGAATTCCGATCAAGTTATCAAAATGGTTCCACTGTTGGATCTTAAAAAATCCGAGCAACCTAGTTTCGATGCGAATTACGTTGAACAAGAGTTCACCCCTTTTGATCAGAGCTATCAAAGCACCGAACACATTGCATTTCCTCAGATTCCAGAACTCGAAACTGATTTTACGTTTCCAATGGAAAGAGTTGATGAACAAAATTTATTTGATGTGTTTGGTCCCTTGGAAACATCTGAGTTTGGAATGGTTCCTTTTTTTGAGCCATCAGGGAGTTTCAAAATTGATAATTTCTTTGATGATTTTCCAGAGGACATGTTTGATCACATTGAGCCACATTCAAATCCCTCTAAGCTCTGA
Protein sequence

>Msa1271350

RRKRKMHGKKDQEHVRKGPWKTEEDEVLLHHVKKYGPRDWSSIRSKGLLQRTGKSCRLRWVNKLRPNLKNGCKFTIEEERIVIELQEQFGNKWAKIASYLPGRTDNDVKNFWSSRQKRLARLLKTSSSTTSKSHKNKAKVSSRVPSHEVPYKFSSSSEGEASSKPQPYSLPCIENSDQVIKMVPLLDLKKSEQPSFDANYVEQEFTPFDQSYQSTEHIAFPQIPELETDFTFPMERVDEQNLFDVFGPLETSEFGMVPFFEPSGSFKIDNFFDDFPEDMFDHIEPHSNPSKL*