Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1275440 | sp|Q9LRW1|LBD22_ARATH | 67.176 | 131 | 43 | 0 | 11 | 141 | 35 | 165 | 1.12e-55 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1275440 | G7LHF8 | 92.763 | 304 | 19 | 2 | 1 | 302 | 1 | 303 | 0.0 | 513 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1275440 | TF | LOB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1275440 | MtrunA17_Chr8g0342351 | 95.294 | 255 | 9 | 2 | 1 | 253 | 1 | 254 | 0.0 | 499 |
| Msa1275440 | MtrunA17_Chr2g0330201 | 42.647 | 272 | 109 | 8 | 9 | 250 | 16 | 270 | 1.31e-51 | 171 |
| Msa1275440 | MtrunA17_Chr4g0059901 | 58.333 | 108 | 45 | 0 | 9 | 116 | 7 | 114 | 5.74e-36 | 130 |
| Msa1275440 | MtrunA17_Chr6g0452671 | 51.887 | 106 | 51 | 0 | 3 | 108 | 2 | 107 | 2.57e-33 | 121 |
| Msa1275440 | MtrunA17_Chr6g0452661 | 42.138 | 159 | 81 | 2 | 11 | 158 | 8 | 166 | 1.39e-30 | 115 |
| Msa1275440 | MtrunA17_Chr4g0055441 | 53.922 | 102 | 46 | 1 | 13 | 113 | 3 | 104 | 3.81e-30 | 111 |
| Msa1275440 | MtrunA17_Chr6g0452691 | 47.009 | 117 | 61 | 1 | 9 | 124 | 6 | 122 | 4.42e-28 | 107 |
| Msa1275440 | MtrunA17_Chr5g0439111 | 49.580 | 119 | 56 | 2 | 11 | 128 | 8 | 123 | 2.13e-27 | 106 |
| Msa1275440 | MtrunA17_Chr3g0117121 | 41.441 | 111 | 65 | 0 | 5 | 115 | 3 | 113 | 5.79e-26 | 101 |
| Msa1275440 | MtrunA17_Chr7g0227511 | 41.346 | 104 | 61 | 0 | 9 | 112 | 8 | 111 | 1.09e-25 | 100 |
| Msa1275440 | MtrunA17_Chr4g0058651 | 43.000 | 100 | 57 | 0 | 13 | 112 | 12 | 111 | 4.18e-25 | 99.4 |
| Msa1275440 | MtrunA17_Chr2g0311601 | 37.815 | 119 | 69 | 1 | 8 | 121 | 9 | 127 | 4.37e-25 | 98.6 |
| Msa1275440 | MtrunA17_Chr4g0043421 | 40.385 | 104 | 62 | 0 | 13 | 116 | 16 | 119 | 4.66e-25 | 99.0 |
| Msa1275440 | MtrunA17_Chr4g0040831 | 39.370 | 127 | 62 | 3 | 5 | 129 | 8 | 121 | 1.16e-23 | 95.9 |
| Msa1275440 | MtrunA17_Chr6g0449641 | 40.385 | 104 | 62 | 0 | 9 | 112 | 6 | 109 | 2.17e-23 | 93.6 |
| Msa1275440 | MtrunA17_Chr8g0353981 | 40.187 | 107 | 64 | 0 | 13 | 119 | 8 | 114 | 2.63e-23 | 95.5 |
| Msa1275440 | MtrunA17_Chr6g0449651 | 40.777 | 103 | 61 | 0 | 13 | 115 | 68 | 170 | 4.05e-23 | 94.4 |
| Msa1275440 | MtrunA17_Chr3g0115431 | 37.736 | 106 | 66 | 0 | 10 | 115 | 7 | 112 | 6.09e-23 | 94.4 |
| Msa1275440 | MtrunA17_Chr3g0106101 | 36.697 | 109 | 69 | 0 | 10 | 118 | 5 | 113 | 6.70e-23 | 93.2 |
| Msa1275440 | MtrunA17_Chr5g0402611 | 37.391 | 115 | 68 | 1 | 1 | 115 | 1 | 111 | 9.69e-23 | 95.9 |
| Msa1275440 | MtrunA17_Chr3g0114061 | 34.615 | 130 | 73 | 1 | 8 | 137 | 4 | 121 | 1.41e-22 | 91.7 |
| Msa1275440 | MtrunA17_Chr7g0225111 | 38.532 | 109 | 67 | 0 | 13 | 121 | 6 | 114 | 1.80e-22 | 90.1 |
| Msa1275440 | MtrunA17_Chr8g0374591 | 35.455 | 110 | 71 | 0 | 6 | 115 | 2 | 111 | 4.30e-22 | 89.7 |
| Msa1275440 | MtrunA17_Chr5g0444351 | 38.532 | 109 | 67 | 0 | 13 | 121 | 6 | 114 | 1.20e-21 | 89.0 |
| Msa1275440 | MtrunA17_Chr7g0260971 | 38.938 | 113 | 68 | 1 | 2 | 113 | 4 | 116 | 1.35e-21 | 90.9 |
| Msa1275440 | MtrunA17_Chr3g0097221 | 32.847 | 137 | 82 | 1 | 7 | 143 | 2 | 128 | 1.69e-21 | 92.0 |
| Msa1275440 | MtrunA17_Chr5g0438091 | 37.736 | 106 | 64 | 2 | 8 | 112 | 35 | 139 | 7.04e-21 | 88.2 |
| Msa1275440 | MtrunA17_Chr5g0437571 | 33.945 | 109 | 72 | 0 | 13 | 121 | 7 | 115 | 9.85e-21 | 87.0 |
| Msa1275440 | MtrunA17_Chr4g0030001 | 37.500 | 144 | 71 | 5 | 6 | 130 | 13 | 156 | 1.26e-20 | 87.4 |
| Msa1275440 | MtrunA17_Chr3g0129071 | 36.364 | 110 | 68 | 2 | 8 | 116 | 43 | 151 | 2.04e-20 | 88.2 |
| Msa1275440 | MtrunA17_Chr5g0437401 | 35.238 | 105 | 68 | 0 | 9 | 113 | 8 | 112 | 3.95e-20 | 85.9 |
| Msa1275440 | MtrunA17_Chr8g0374601 | 36.893 | 103 | 65 | 0 | 11 | 113 | 25 | 127 | 5.70e-20 | 87.8 |
| Msa1275440 | MtrunA17_Chr1g0200201 | 38.614 | 101 | 62 | 0 | 13 | 113 | 73 | 173 | 2.89e-19 | 84.7 |
| Msa1275440 | MtrunA17_Chr5g0435641 | 35.922 | 103 | 65 | 1 | 12 | 113 | 7 | 109 | 3.94e-19 | 83.6 |
| Msa1275440 | MtrunA17_Chr8g0351701 | 37.500 | 104 | 64 | 1 | 13 | 115 | 24 | 127 | 1.37e-18 | 82.8 |
| Msa1275440 | MtrunA17_Chr1g0184271 | 37.255 | 102 | 63 | 1 | 13 | 113 | 13 | 114 | 2.77e-18 | 82.0 |
| Msa1275440 | MtrunA17_Chr6g0460951 | 37.624 | 101 | 62 | 1 | 13 | 112 | 41 | 141 | 3.92e-18 | 81.6 |
| Msa1275440 | MtrunA17_Chr7g0261031 | 38.235 | 102 | 62 | 1 | 13 | 113 | 9 | 110 | 4.36e-18 | 81.3 |
| Msa1275440 | MtrunA17_Chr3g0113891 | 35.165 | 91 | 59 | 0 | 8 | 98 | 10 | 100 | 8.54e-18 | 79.7 |
| Msa1275440 | MtrunA17_Chr8g0351721 | 40.196 | 102 | 60 | 1 | 13 | 113 | 19 | 120 | 1.12e-17 | 80.1 |
| Msa1275440 | MtrunA17_Chr5g0432451 | 37.273 | 110 | 67 | 2 | 8 | 116 | 39 | 147 | 1.65e-17 | 79.7 |
| Msa1275440 | MtrunA17_Chr1g0184281 | 33.333 | 138 | 85 | 4 | 2 | 136 | 5 | 138 | 1.90e-16 | 76.6 |
| Msa1275440 | MtrunA17_Chr6g0460941 | 36.364 | 88 | 55 | 1 | 13 | 99 | 8 | 95 | 3.17e-15 | 70.1 |
| Msa1275440 | MtrunA17_Chr7g0245871 | 32.673 | 101 | 67 | 1 | 13 | 112 | 28 | 128 | 7.57e-15 | 72.8 |
| Msa1275440 | MtrunA17_Chr4g0046201 | 32.184 | 87 | 59 | 0 | 12 | 98 | 6 | 92 | 5.14e-14 | 70.9 |
| Msa1275440 | MtrunA17_Chr7g0245861 | 35.644 | 101 | 62 | 2 | 1 | 98 | 1 | 101 | 3.96e-13 | 65.5 |
| Msa1275440 | MtrunA17_Chr2g0326041 | 58.333 | 48 | 17 | 1 | 13 | 60 | 34 | 78 | 3.41e-12 | 61.6 |
| Msa1275440 | MtrunA17_Chr8g0374581 | 33.981 | 103 | 60 | 2 | 11 | 105 | 7 | 109 | 3.71e-12 | 64.7 |
| Msa1275440 | MtrunA17_Chr6g0449311 | 42.857 | 84 | 47 | 1 | 43 | 125 | 4 | 87 | 1.04e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1275440 | AT3G13850.1 | 67.176 | 131 | 43 | 0 | 11 | 141 | 35 | 165 | 1.14e-56 | 184 |
| Msa1275440 | AT1G72980.1 | 50.407 | 123 | 61 | 0 | 9 | 131 | 10 | 132 | 1.37e-38 | 135 |
| Msa1275440 | AT3G47870.1 | 52.294 | 109 | 52 | 0 | 9 | 117 | 33 | 141 | 1.85e-31 | 120 |
| Msa1275440 | AT5G63090.4 | 42.202 | 109 | 63 | 0 | 5 | 113 | 4 | 112 | 1.37e-26 | 103 |
| Msa1275440 | AT5G63090.3 | 42.202 | 109 | 63 | 0 | 5 | 113 | 4 | 112 | 1.37e-26 | 103 |
| Msa1275440 | AT5G63090.2 | 42.202 | 109 | 63 | 0 | 5 | 113 | 4 | 112 | 1.37e-26 | 103 |
| Msa1275440 | AT5G63090.1 | 42.202 | 109 | 63 | 0 | 5 | 113 | 4 | 112 | 1.37e-26 | 103 |
| Msa1275440 | AT1G65620.1 | 40.708 | 113 | 67 | 0 | 5 | 117 | 2 | 114 | 4.67e-26 | 102 |
| Msa1275440 | AT1G65620.4 | 40.708 | 113 | 67 | 0 | 5 | 117 | 2 | 114 | 4.67e-26 | 102 |
| Msa1275440 | AT1G65620.3 | 40.708 | 113 | 67 | 0 | 5 | 117 | 2 | 114 | 4.67e-26 | 102 |
| Msa1275440 | AT1G65620.5 | 40.708 | 113 | 67 | 0 | 5 | 117 | 2 | 114 | 4.67e-26 | 102 |
| Msa1275440 | AT1G65620.2 | 40.708 | 113 | 67 | 0 | 5 | 117 | 2 | 114 | 4.67e-26 | 102 |
| Msa1275440 | AT3G27650.1 | 40.594 | 101 | 60 | 0 | 6 | 106 | 33 | 133 | 4.98e-24 | 95.9 |
| Msa1275440 | AT1G31320.1 | 43.678 | 87 | 49 | 0 | 13 | 99 | 14 | 100 | 1.33e-22 | 92.8 |
| Msa1275440 | AT3G50510.1 | 40.777 | 103 | 61 | 0 | 13 | 115 | 13 | 115 | 2.01e-22 | 92.8 |
| Msa1275440 | AT3G50510.2 | 40.777 | 103 | 61 | 0 | 13 | 115 | 13 | 115 | 2.01e-22 | 92.8 |
| Msa1275440 | AT2G30130.1 | 35.200 | 125 | 81 | 0 | 10 | 134 | 6 | 130 | 5.47e-22 | 91.7 |
| Msa1275440 | AT3G26660.1 | 34.234 | 111 | 73 | 0 | 13 | 123 | 6 | 116 | 3.69e-21 | 87.4 |
| Msa1275440 | AT2G42430.1 | 38.261 | 115 | 66 | 3 | 2 | 113 | 5 | 117 | 6.38e-21 | 90.1 |
| Msa1275440 | AT5G66870.1 | 35.185 | 108 | 70 | 0 | 8 | 115 | 3 | 110 | 1.05e-20 | 90.5 |
| Msa1275440 | AT3G26620.1 | 33.945 | 109 | 72 | 0 | 13 | 121 | 6 | 114 | 1.34e-20 | 85.9 |
| Msa1275440 | AT2G28500.1 | 34.228 | 149 | 77 | 3 | 13 | 140 | 56 | 204 | 2.62e-20 | 88.2 |
| Msa1275440 | AT1G16530.1 | 35.398 | 113 | 72 | 1 | 6 | 117 | 8 | 120 | 4.94e-20 | 85.5 |
| Msa1275440 | AT3G58190.1 | 40.196 | 102 | 60 | 1 | 13 | 113 | 12 | 113 | 5.45e-20 | 86.7 |
| Msa1275440 | AT1G07900.1 | 34.615 | 130 | 74 | 2 | 13 | 131 | 34 | 163 | 7.03e-20 | 85.9 |
| Msa1275440 | AT1G06280.1 | 37.500 | 104 | 62 | 1 | 11 | 114 | 23 | 123 | 1.16e-19 | 85.5 |
| Msa1275440 | AT3G03760.1 | 39.604 | 101 | 60 | 1 | 13 | 112 | 52 | 152 | 2.28e-19 | 86.3 |
| Msa1275440 | AT2G23660.2 | 37.000 | 100 | 61 | 1 | 9 | 108 | 2 | 99 | 5.25e-19 | 85.9 |
| Msa1275440 | AT2G23660.3 | 37.000 | 100 | 61 | 1 | 9 | 108 | 2 | 99 | 5.25e-19 | 85.9 |
| Msa1275440 | AT2G23660.1 | 37.000 | 100 | 61 | 1 | 9 | 108 | 2 | 99 | 5.25e-19 | 85.9 |
| Msa1275440 | AT2G30340.2 | 34.211 | 114 | 73 | 1 | 8 | 121 | 49 | 160 | 1.04e-18 | 84.3 |
| Msa1275440 | AT2G30340.1 | 34.211 | 114 | 73 | 1 | 8 | 121 | 48 | 159 | 1.30e-18 | 84.0 |
| Msa1275440 | AT2G42440.1 | 36.000 | 100 | 63 | 1 | 13 | 111 | 8 | 107 | 2.86e-18 | 82.8 |
| Msa1275440 | AT4G00210.1 | 35.714 | 112 | 71 | 1 | 5 | 115 | 4 | 115 | 4.80e-18 | 81.6 |
| Msa1275440 | AT2G19820.1 | 39.423 | 104 | 61 | 2 | 5 | 106 | 4 | 107 | 9.91e-18 | 78.2 |
| Msa1275440 | AT3G11090.1 | 33.333 | 111 | 67 | 2 | 8 | 118 | 7 | 110 | 3.05e-17 | 78.2 |
| Msa1275440 | AT2G45420.1 | 37.000 | 100 | 62 | 1 | 15 | 113 | 40 | 139 | 4.51e-17 | 79.7 |
| Msa1275440 | AT2G40470.2 | 29.371 | 143 | 91 | 2 | 8 | 150 | 16 | 148 | 5.19e-17 | 78.2 |
| Msa1275440 | AT4G00220.1 | 36.275 | 102 | 64 | 1 | 15 | 115 | 20 | 121 | 5.27e-17 | 79.0 |
| Msa1275440 | AT2G40470.1 | 29.452 | 146 | 93 | 2 | 8 | 153 | 41 | 176 | 6.06e-17 | 78.6 |
| Msa1275440 | AT5G06080.1 | 34.545 | 110 | 71 | 1 | 12 | 120 | 7 | 116 | 6.48e-17 | 77.4 |
| Msa1275440 | AT2G31310.1 | 35.294 | 102 | 65 | 1 | 13 | 113 | 8 | 109 | 3.90e-16 | 75.5 |
| Msa1275440 | AT5G15060.1 | 40.000 | 80 | 46 | 1 | 6 | 83 | 11 | 90 | 8.56e-16 | 73.6 |
| Msa1275440 | AT5G35900.1 | 34.906 | 106 | 62 | 2 | 10 | 108 | 3 | 108 | 2.30e-15 | 73.9 |
| Msa1275440 | AT2G45410.1 | 35.088 | 114 | 70 | 2 | 15 | 124 | 19 | 132 | 7.10e-13 | 66.6 |
Find 47 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAACAACATAATAATAAT+TGG | 0.125422 | 8_3:-9373800 | Msa1275440:CDS |
| CTTAATGCACACAAATTATT+TGG | 0.164688 | 8_3:-9374272 | Msa1275440:CDS |
| TGTGATGAAAGAAATGAATT+AGG | 0.196401 | 8_3:-9373687 | Msa1275440:CDS |
| CAAATAATTTGTGTGCATTA+AGG | 0.234733 | 8_3:+9374273 | None:intergenic |
| ATGAATTCAGATTCATTGTT+AGG | 0.282439 | 8_3:-9373987 | Msa1275440:CDS |
| TGTCTATCATGAGGAAAATA+AGG | 0.316434 | 8_3:+9374305 | None:intergenic |
| CCACCAGGATCTATTGTTTC+GGG | 0.318342 | 8_3:-9373954 | Msa1275440:CDS |
| ATTTCTTGACCCTCCTCTTA+AGG | 0.336429 | 8_3:-9374222 | Msa1275440:CDS |
| GCAACAACATAATAATAATT+GGG | 0.338766 | 8_3:-9373799 | Msa1275440:CDS |
| CAACAAATACAAGTTAATTA+TGG | 0.343182 | 8_3:-9374023 | Msa1275440:CDS |
| CCCACCAGGATCTATTGTTT+CGG | 0.360680 | 8_3:-9373955 | Msa1275440:CDS |
| GTGATGAAAGAAATGAATTA+GGG | 0.378390 | 8_3:-9373686 | Msa1275440:CDS |
| TCACAAGGTATATCAAGAAT+TGG | 0.381403 | 8_3:+9373705 | None:intergenic |
| CATCACTAGCATTACTACTT+TGG | 0.436790 | 8_3:+9373742 | None:intergenic |
| CTATCATCTTTGTCATTGCA+TGG | 0.444287 | 8_3:-9373765 | Msa1275440:CDS |
| CTCATGGCTTGATCCTTAAG+AGG | 0.493595 | 8_3:+9374209 | None:intergenic |
| TGTCCATGTTCTTGTAATTG+TGG | 0.499816 | 8_3:+9373885 | None:intergenic |
| TATTTGTAACAACCACCAAC+AGG | 0.515920 | 8_3:+9374149 | None:intergenic |
| CAACAACATAATAATAATTG+GGG | 0.530146 | 8_3:-9373798 | Msa1275440:CDS |
| TAAGGTGCTAGAATGCAATC+AGG | 0.530324 | 8_3:+9374323 | None:intergenic |
| TTATTATTATGTTGTTGCAA+AGG | 0.540482 | 8_3:+9373804 | None:intergenic |
| TATTGTTTCGGGTACCGCAC+CGG | 0.549074 | 8_3:-9373943 | Msa1275440:CDS |
| CCTGTGGTGAAGTATTTCTC+CGG | 0.554774 | 8_3:+9373656 | None:intergenic |
| AATTCATTTCTTTCATCACA+AGG | 0.571373 | 8_3:+9373690 | None:intergenic |
| ACAATTACAAGAACATGGAC+AGG | 0.573277 | 8_3:-9373883 | Msa1275440:CDS |
| GATCAAGATCATGATCTGAA+AGG | 0.590787 | 8_3:-9372821 | Msa1275440:CDS |
| GTACCCGAAACAATAGATCC+TGG | 0.590929 | 8_3:+9373951 | None:intergenic |
| CGGGCTAATGATCCTGTTGG+TGG | 0.596972 | 8_3:-9374161 | Msa1275440:CDS |
| AATTGTCTTTGTCTATCATG+AGG | 0.605255 | 8_3:+9374296 | None:intergenic |
| CCGGAGAAATACTTCACCAC+AGG | 0.608508 | 8_3:-9373656 | Msa1275440:intron |
| ATGGCTTGATCCTTAAGAGG+AGG | 0.610526 | 8_3:+9374212 | None:intergenic |
| GTTATGTTTAAGATAGACGA+GGG | 0.616267 | 8_3:-9372896 | Msa1275440:CDS |
| TGGCTTGATCCTTAAGAGGA+GGG | 0.621992 | 8_3:+9374213 | None:intergenic |
| GAGGGATTAATTAAAACAGA+TGG | 0.625680 | 8_3:-9372878 | Msa1275440:CDS |
| ACATGCAGCACATGCTTGAG+TGG | 0.644890 | 8_3:+9374370 | None:intergenic |
| AATGAATTAGGGTTCGACTC+CGG | 0.645373 | 8_3:-9373675 | Msa1275440:CDS |
| ATGCGGGCTAATGATCCTGT+TGG | 0.645871 | 8_3:-9374164 | Msa1275440:CDS |
| CCGAAACAATAGATCCTGGT+GGG | 0.652449 | 8_3:+9373955 | None:intergenic |
| GTGCCACAATTACAAGAACA+TGG | 0.656427 | 8_3:-9373888 | Msa1275440:CDS |
| ACAACATAATAATAATTGGG+GGG | 0.660517 | 8_3:-9373796 | Msa1275440:CDS |
| ACATTGTAATGATAATGAGC+CGG | 0.666132 | 8_3:+9373924 | None:intergenic |
| AATGATATGCAGTGACGAAG+CGG | 0.673039 | 8_3:-9372918 | Msa1275440:intron |
| CCCGAAACAATAGATCCTGG+TGG | 0.680981 | 8_3:+9373954 | None:intergenic |
| CTCTTAAGGATCAAGCCATG+AGG | 0.688822 | 8_3:-9374208 | Msa1275440:CDS |
| GGTTATGTTTAAGATAGACG+AGG | 0.691391 | 8_3:-9372897 | Msa1275440:CDS |
| AACAACATAATAATAATTGG+GGG | 0.697306 | 8_3:-9373797 | Msa1275440:CDS |
| GTAATGATAATGAGCCGGTG+CGG | 0.722057 | 8_3:+9373929 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCATTTATTGTTTTTTAT+AGG | + | chr8_3:9373952-9373971 | None:intergenic | 10.0% |
| !! | TAAAAAACAATAAATGAAAT+TGG | - | chr8_3:9373953-9373972 | Msa1275440:CDS | 10.0% |
| !!! | TTTCATTTATTGTTTTTTAT+AGG | + | chr8_3:9373952-9373971 | None:intergenic | 10.0% |
| !! | TAAAAAACAATAAATGAAAT+TGG | - | chr8_3:9373953-9373972 | Msa1275440:CDS | 10.0% |
| !! | CAACAAATACAAGTTAATTA+TGG | - | chr8_3:9373153-9373172 | Msa1275440:intron | 20.0% |
| !! | TTATTATTATGTTGTTGCAA+AGG | + | chr8_3:9373375-9373394 | None:intergenic | 20.0% |
| !! | TGCAACAACATAATAATAAT+TGG | - | chr8_3:9373376-9373395 | Msa1275440:intron | 20.0% |
| !! | GCAACAACATAATAATAATT+GGG | - | chr8_3:9373377-9373396 | Msa1275440:intron | 20.0% |
| !! | CAACAACATAATAATAATTG+GGG | - | chr8_3:9373378-9373397 | Msa1275440:intron | 20.0% |
| !! | AACAACATAATAATAATTGG+GGG | - | chr8_3:9373379-9373398 | Msa1275440:intron | 20.0% |
| !! | ATGACATAAACATTAAGAAA+AGG | + | chr8_3:9373556-9373575 | None:intergenic | 20.0% |
| !! | AGTAATATATAGTGTATAAC+TGG | - | chr8_3:9374060-9374079 | Msa1275440:CDS | 20.0% |
| !!! | ATAACTGGATTAGAAATTAA+TGG | - | chr8_3:9374075-9374094 | Msa1275440:CDS | 20.0% |
| !! | TATATTGTTTGAATCAATGA+TGG | + | chr8_3:9374126-9374145 | None:intergenic | 20.0% |
| !! | CAACAAATACAAGTTAATTA+TGG | - | chr8_3:9373153-9373172 | Msa1275440:intron | 20.0% |
| !! | TTATTATTATGTTGTTGCAA+AGG | + | chr8_3:9373375-9373394 | None:intergenic | 20.0% |
| !! | TGCAACAACATAATAATAAT+TGG | - | chr8_3:9373376-9373395 | Msa1275440:intron | 20.0% |
| !! | GCAACAACATAATAATAATT+GGG | - | chr8_3:9373377-9373396 | Msa1275440:intron | 20.0% |
| !! | CAACAACATAATAATAATTG+GGG | - | chr8_3:9373378-9373397 | Msa1275440:intron | 20.0% |
| !! | AACAACATAATAATAATTGG+GGG | - | chr8_3:9373379-9373398 | Msa1275440:intron | 20.0% |
| !! | ATGACATAAACATTAAGAAA+AGG | + | chr8_3:9373556-9373575 | None:intergenic | 20.0% |
| !! | AGTAATATATAGTGTATAAC+TGG | - | chr8_3:9374060-9374079 | Msa1275440:CDS | 20.0% |
| !!! | ATAACTGGATTAGAAATTAA+TGG | - | chr8_3:9374075-9374094 | Msa1275440:CDS | 20.0% |
| !! | TATATTGTTTGAATCAATGA+TGG | + | chr8_3:9374126-9374145 | None:intergenic | 20.0% |
| !! | CAAATAATTTGTGTGCATTA+AGG | + | chr8_3:9372906-9372925 | None:intergenic | 25.0% |
| ! | CTTAATGCACACAAATTATT+TGG | - | chr8_3:9372904-9372923 | Msa1275440:CDS | 25.0% |
| !!! | TCATTTTTCAATCTGATATG+CGG | - | chr8_3:9372995-9373014 | Msa1275440:intron | 25.0% |
| ! | ATGAATTCAGATTCATTGTT+AGG | - | chr8_3:9373189-9373208 | Msa1275440:intron | 25.0% |
| ! | ACAACATAATAATAATTGGG+GGG | - | chr8_3:9373380-9373399 | Msa1275440:intron | 25.0% |
| ! | AATTCATTTCTTTCATCACA+AGG | + | chr8_3:9373489-9373508 | None:intergenic | 25.0% |
| ! | TGTGATGAAAGAAATGAATT+AGG | - | chr8_3:9373489-9373508 | Msa1275440:intron | 25.0% |
| ! | GTGATGAAAGAAATGAATTA+GGG | - | chr8_3:9373490-9373509 | Msa1275440:intron | 25.0% |
| ! | AAAAGGAAAAAAATTACCTG+TGG | + | chr8_3:9373539-9373558 | None:intergenic | 25.0% |
| !!! | TTAGTCGATAGTAATTTGTT+AGG | + | chr8_3:9373923-9373942 | None:intergenic | 25.0% |
| ! | TAATTATATACTGCTTGTGA+TGG | - | chr8_3:9374199-9374218 | Msa1275440:CDS | 25.0% |
| !! | CAAATAATTTGTGTGCATTA+AGG | + | chr8_3:9372906-9372925 | None:intergenic | 25.0% |
| ! | CTTAATGCACACAAATTATT+TGG | - | chr8_3:9372904-9372923 | Msa1275440:CDS | 25.0% |
| !!! | TCATTTTTCAATCTGATATG+CGG | - | chr8_3:9372995-9373014 | Msa1275440:intron | 25.0% |
| ! | ATGAATTCAGATTCATTGTT+AGG | - | chr8_3:9373189-9373208 | Msa1275440:intron | 25.0% |
| ! | ACAACATAATAATAATTGGG+GGG | - | chr8_3:9373380-9373399 | Msa1275440:intron | 25.0% |
| ! | AATTCATTTCTTTCATCACA+AGG | + | chr8_3:9373489-9373508 | None:intergenic | 25.0% |
| ! | TGTGATGAAAGAAATGAATT+AGG | - | chr8_3:9373489-9373508 | Msa1275440:intron | 25.0% |
| ! | GTGATGAAAGAAATGAATTA+GGG | - | chr8_3:9373490-9373509 | Msa1275440:intron | 25.0% |
| ! | AAAAGGAAAAAAATTACCTG+TGG | + | chr8_3:9373539-9373558 | None:intergenic | 25.0% |
| !!! | TTAGTCGATAGTAATTTGTT+AGG | + | chr8_3:9373923-9373942 | None:intergenic | 25.0% |
| ! | TAATTATATACTGCTTGTGA+TGG | - | chr8_3:9374199-9374218 | Msa1275440:CDS | 25.0% |
| TGTCTATCATGAGGAAAATA+AGG | + | chr8_3:9372874-9372893 | None:intergenic | 30.0% | |
| AATTGTCTTTGTCTATCATG+AGG | + | chr8_3:9372883-9372902 | None:intergenic | 30.0% | |
| TTGAAAAATGATTGTCCTCA+TGG | + | chr8_3:9372986-9373005 | None:intergenic | 30.0% | |
| !! | CATTTTTCAATCTGATATGC+GGG | - | chr8_3:9372996-9373015 | Msa1275440:intron | 30.0% |
| TTGAGATTGTGATCGAAAAA+TGG | + | chr8_3:9373121-9373140 | None:intergenic | 30.0% | |
| ! | ACATTGTAATGATAATGAGC+CGG | + | chr8_3:9373255-9373274 | None:intergenic | 30.0% |
| TCACAAGGTATATCAAGAAT+TGG | + | chr8_3:9373474-9373493 | None:intergenic | 30.0% | |
| AACCTCTTGTGTAAAAAACA+GGG | - | chr8_3:9373687-9373706 | Msa1275440:CDS | 30.0% | |
| TACGTACAATACACCAATAA+TGG | - | chr8_3:9373716-9373735 | Msa1275440:CDS | 30.0% | |
| TACAATACACCAATAATGGT+GGG | - | chr8_3:9373720-9373739 | Msa1275440:CDS | 30.0% | |
| GAAATTAATCATGGAAGGTA+TGG | - | chr8_3:9373804-9373823 | Msa1275440:CDS | 30.0% | |
| AGGTATGGTTATTGTAATCA+TGG | - | chr8_3:9373819-9373838 | Msa1275440:CDS | 30.0% | |
| ATGGTTATTGTAATCATGGA+AGG | - | chr8_3:9373823-9373842 | Msa1275440:CDS | 30.0% | |
| TATTGTAATCATGGAAGGTA+TGG | - | chr8_3:9373828-9373847 | Msa1275440:CDS | 30.0% | |
| !! | ACATTGAAGGAGTATTATGT+AGG | - | chr8_3:9373868-9373887 | Msa1275440:CDS | 30.0% |
| !! | GATAGTAATTTGTTAGGAGA+GGG | + | chr8_3:9373917-9373936 | None:intergenic | 30.0% |
| ! | ATCTAACATGATCCAGTTTT+TGG | - | chr8_3:9374233-9374252 | Msa1275440:CDS | 30.0% |
| ! | GTTATGTTTAAGATAGACGA+GGG | - | chr8_3:9374280-9374299 | Msa1275440:CDS | 30.0% |
| GAGGGATTAATTAAAACAGA+TGG | - | chr8_3:9374298-9374317 | Msa1275440:CDS | 30.0% | |
| TGTCTATCATGAGGAAAATA+AGG | + | chr8_3:9372874-9372893 | None:intergenic | 30.0% | |
| AATTGTCTTTGTCTATCATG+AGG | + | chr8_3:9372883-9372902 | None:intergenic | 30.0% | |
| TTGAAAAATGATTGTCCTCA+TGG | + | chr8_3:9372986-9373005 | None:intergenic | 30.0% | |
| !! | CATTTTTCAATCTGATATGC+GGG | - | chr8_3:9372996-9373015 | Msa1275440:intron | 30.0% |
| TTGAGATTGTGATCGAAAAA+TGG | + | chr8_3:9373121-9373140 | None:intergenic | 30.0% | |
| ! | ACATTGTAATGATAATGAGC+CGG | + | chr8_3:9373255-9373274 | None:intergenic | 30.0% |
| TCACAAGGTATATCAAGAAT+TGG | + | chr8_3:9373474-9373493 | None:intergenic | 30.0% | |
| AACCTCTTGTGTAAAAAACA+GGG | - | chr8_3:9373687-9373706 | Msa1275440:CDS | 30.0% | |
| TACGTACAATACACCAATAA+TGG | - | chr8_3:9373716-9373735 | Msa1275440:CDS | 30.0% | |
| TACAATACACCAATAATGGT+GGG | - | chr8_3:9373720-9373739 | Msa1275440:CDS | 30.0% | |
| GAAATTAATCATGGAAGGTA+TGG | - | chr8_3:9373804-9373823 | Msa1275440:CDS | 30.0% | |
| AGGTATGGTTATTGTAATCA+TGG | - | chr8_3:9373819-9373838 | Msa1275440:CDS | 30.0% | |
| ATGGTTATTGTAATCATGGA+AGG | - | chr8_3:9373823-9373842 | Msa1275440:CDS | 30.0% | |
| TATTGTAATCATGGAAGGTA+TGG | - | chr8_3:9373828-9373847 | Msa1275440:CDS | 30.0% | |
| !! | ACATTGAAGGAGTATTATGT+AGG | - | chr8_3:9373868-9373887 | Msa1275440:CDS | 30.0% |
| !! | GATAGTAATTTGTTAGGAGA+GGG | + | chr8_3:9373917-9373936 | None:intergenic | 30.0% |
| ! | ATCTAACATGATCCAGTTTT+TGG | - | chr8_3:9374233-9374252 | Msa1275440:CDS | 30.0% |
| ! | GTTATGTTTAAGATAGACGA+GGG | - | chr8_3:9374280-9374299 | Msa1275440:CDS | 30.0% |
| GAGGGATTAATTAAAACAGA+TGG | - | chr8_3:9374298-9374317 | Msa1275440:CDS | 30.0% | |
| TATTTGTAACAACCACCAAC+AGG | + | chr8_3:9373030-9373049 | None:intergenic | 35.0% | |
| ! | TTAGGTTTTTATAACCCACC+AGG | - | chr8_3:9373207-9373226 | Msa1275440:intron | 35.0% |
| TGTCCATGTTCTTGTAATTG+TGG | + | chr8_3:9373294-9373313 | None:intergenic | 35.0% | |
| ACAATTACAAGAACATGGAC+AGG | - | chr8_3:9373293-9373312 | Msa1275440:intron | 35.0% | |
| CTATCATCTTTGTCATTGCA+TGG | - | chr8_3:9373411-9373430 | Msa1275440:intron | 35.0% | |
| CATCACTAGCATTACTACTT+TGG | + | chr8_3:9373437-9373456 | None:intergenic | 35.0% | |
| AGAAAAAGTTGCAATACCGA+CGG | - | chr8_3:9373581-9373600 | Msa1275440:intron | 35.0% | |
| CAACCTCTTGTGTAAAAAAC+AGG | - | chr8_3:9373686-9373705 | Msa1275440:CDS | 35.0% | |
| !!! | TACCCTGTTTTTTACACAAG+AGG | + | chr8_3:9373692-9373711 | None:intergenic | 35.0% |
| CTTGTGTAAAAAACAGGGTA+AGG | - | chr8_3:9373692-9373711 | Msa1275440:CDS | 35.0% | |
| GTACAATACACCAATAATGG+TGG | - | chr8_3:9373719-9373738 | Msa1275440:CDS | 35.0% | |
| GATTAATTTCCGTCGGTAAA+GGG | + | chr8_3:9373794-9373813 | None:intergenic | 35.0% | |
| TGATTAATTTCCGTCGGTAA+AGG | + | chr8_3:9373795-9373814 | None:intergenic | 35.0% | |
| TTACCGACGGAAATTAATCA+TGG | - | chr8_3:9373795-9373814 | Msa1275440:CDS | 35.0% | |
| CTTCCATGATTAATTTCCGT+CGG | + | chr8_3:9373801-9373820 | None:intergenic | 35.0% | |
| ! | ATCATGGAAGGTATGGTTAT+TGG | - | chr8_3:9373811-9373830 | Msa1275440:CDS | 35.0% |
| ! | GAAGGTATGGTTATTGGTAT+GGG | - | chr8_3:9373841-9373860 | Msa1275440:CDS | 35.0% |
| !! | CGATAGTAATTTGTTAGGAG+AGG | + | chr8_3:9373918-9373937 | None:intergenic | 35.0% |
| GCATATCATTAGCCAAAAAC+TGG | + | chr8_3:9374248-9374267 | None:intergenic | 35.0% | |
| ! | GGTTATGTTTAAGATAGACG+AGG | - | chr8_3:9374279-9374298 | Msa1275440:CDS | 35.0% |
| GATCAAGATCATGATCTGAA+AGG | - | chr8_3:9374355-9374374 | Msa1275440:CDS | 35.0% | |
| TATTTGTAACAACCACCAAC+AGG | + | chr8_3:9373030-9373049 | None:intergenic | 35.0% | |
| ! | TTAGGTTTTTATAACCCACC+AGG | - | chr8_3:9373207-9373226 | Msa1275440:intron | 35.0% |
| TGTCCATGTTCTTGTAATTG+TGG | + | chr8_3:9373294-9373313 | None:intergenic | 35.0% | |
| ACAATTACAAGAACATGGAC+AGG | - | chr8_3:9373293-9373312 | Msa1275440:intron | 35.0% | |
| CTATCATCTTTGTCATTGCA+TGG | - | chr8_3:9373411-9373430 | Msa1275440:intron | 35.0% | |
| CATCACTAGCATTACTACTT+TGG | + | chr8_3:9373437-9373456 | None:intergenic | 35.0% | |
| AGAAAAAGTTGCAATACCGA+CGG | - | chr8_3:9373581-9373600 | Msa1275440:intron | 35.0% | |
| CAACCTCTTGTGTAAAAAAC+AGG | - | chr8_3:9373686-9373705 | Msa1275440:CDS | 35.0% | |
| !!! | TACCCTGTTTTTTACACAAG+AGG | + | chr8_3:9373692-9373711 | None:intergenic | 35.0% |
| CTTGTGTAAAAAACAGGGTA+AGG | - | chr8_3:9373692-9373711 | Msa1275440:CDS | 35.0% | |
| GTACAATACACCAATAATGG+TGG | - | chr8_3:9373719-9373738 | Msa1275440:CDS | 35.0% | |
| GATTAATTTCCGTCGGTAAA+GGG | + | chr8_3:9373794-9373813 | None:intergenic | 35.0% | |
| TGATTAATTTCCGTCGGTAA+AGG | + | chr8_3:9373795-9373814 | None:intergenic | 35.0% | |
| TTACCGACGGAAATTAATCA+TGG | - | chr8_3:9373795-9373814 | Msa1275440:CDS | 35.0% | |
| CTTCCATGATTAATTTCCGT+CGG | + | chr8_3:9373801-9373820 | None:intergenic | 35.0% | |
| ! | ATCATGGAAGGTATGGTTAT+TGG | - | chr8_3:9373811-9373830 | Msa1275440:CDS | 35.0% |
| ! | GAAGGTATGGTTATTGGTAT+GGG | - | chr8_3:9373841-9373860 | Msa1275440:CDS | 35.0% |
| !! | CGATAGTAATTTGTTAGGAG+AGG | + | chr8_3:9373918-9373937 | None:intergenic | 35.0% |
| GCATATCATTAGCCAAAAAC+TGG | + | chr8_3:9374248-9374267 | None:intergenic | 35.0% | |
| ! | GGTTATGTTTAAGATAGACG+AGG | - | chr8_3:9374279-9374298 | Msa1275440:CDS | 35.0% |
| GATCAAGATCATGATCTGAA+AGG | - | chr8_3:9374355-9374374 | Msa1275440:CDS | 35.0% | |
| ! | TAAGGTGCTAGAATGCAATC+AGG | + | chr8_3:9372856-9372875 | None:intergenic | 40.0% |
| ATTTCTTGACCCTCCTCTTA+AGG | - | chr8_3:9372954-9372973 | Msa1275440:intron | 40.0% | |
| GTGCCACAATTACAAGAACA+TGG | - | chr8_3:9373288-9373307 | Msa1275440:intron | 40.0% | |
| AATGAATTAGGGTTCGACTC+CGG | - | chr8_3:9373501-9373520 | Msa1275440:intron | 40.0% | |
| ATACCGACGGAAATTAATCG+AGG | - | chr8_3:9373594-9373613 | Msa1275440:intron | 40.0% | |
| TACCGACGGAAATTAATCGA+GGG | - | chr8_3:9373595-9373614 | Msa1275440:intron | 40.0% | |
| AATTAATCGAGGGGTAACCT+TGG | - | chr8_3:9373605-9373624 | Msa1275440:intron | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | - | chr8_3:9373641-9373660 | Msa1275440:intron | 40.0% | |
| CGACGGAAATTAATCATGGA+AGG | - | chr8_3:9373799-9373818 | Msa1275440:CDS | 40.0% | |
| ! | GGAAGGTATGGTTATTGGTA+TGG | - | chr8_3:9373840-9373859 | Msa1275440:CDS | 40.0% |
| ! | TGGTATGGGTTGAACATTGA+AGG | - | chr8_3:9373855-9373874 | Msa1275440:CDS | 40.0% |
| AATGATATGCAGTGACGAAG+CGG | - | chr8_3:9374258-9374277 | Msa1275440:CDS | 40.0% | |
| ! | TAAGGTGCTAGAATGCAATC+AGG | + | chr8_3:9372856-9372875 | None:intergenic | 40.0% |
| ATTTCTTGACCCTCCTCTTA+AGG | - | chr8_3:9372954-9372973 | Msa1275440:intron | 40.0% | |
| GTGCCACAATTACAAGAACA+TGG | - | chr8_3:9373288-9373307 | Msa1275440:intron | 40.0% | |
| AATGAATTAGGGTTCGACTC+CGG | - | chr8_3:9373501-9373520 | Msa1275440:intron | 40.0% | |
| ATACCGACGGAAATTAATCG+AGG | - | chr8_3:9373594-9373613 | Msa1275440:intron | 40.0% | |
| TACCGACGGAAATTAATCGA+GGG | - | chr8_3:9373595-9373614 | Msa1275440:intron | 40.0% | |
| AATTAATCGAGGGGTAACCT+TGG | - | chr8_3:9373605-9373624 | Msa1275440:intron | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | - | chr8_3:9373641-9373660 | Msa1275440:intron | 40.0% | |
| CGACGGAAATTAATCATGGA+AGG | - | chr8_3:9373799-9373818 | Msa1275440:CDS | 40.0% | |
| ! | GGAAGGTATGGTTATTGGTA+TGG | - | chr8_3:9373840-9373859 | Msa1275440:CDS | 40.0% |
| ! | TGGTATGGGTTGAACATTGA+AGG | - | chr8_3:9373855-9373874 | Msa1275440:CDS | 40.0% |
| AATGATATGCAGTGACGAAG+CGG | - | chr8_3:9374258-9374277 | Msa1275440:CDS | 40.0% | |
| ! | CAGGTGCACATTTTCTACGT+TGG | + | chr8_3:9372837-9372856 | None:intergenic | 45.0% |
| TGGCTTGATCCTTAAGAGGA+GGG | + | chr8_3:9372966-9372985 | None:intergenic | 45.0% | |
| ATGGCTTGATCCTTAAGAGG+AGG | + | chr8_3:9372967-9372986 | None:intergenic | 45.0% | |
| CTCATGGCTTGATCCTTAAG+AGG | + | chr8_3:9372970-9372989 | None:intergenic | 45.0% | |
| CTCTTAAGGATCAAGCCATG+AGG | - | chr8_3:9372968-9372987 | Msa1275440:intron | 45.0% | |
| CCGAAACAATAGATCCTGGT+GGG | + | chr8_3:9373224-9373243 | None:intergenic | 45.0% | |
| CCCACCAGGATCTATTGTTT+CGG | - | chr8_3:9373221-9373240 | Msa1275440:intron | 45.0% | |
| CCACCAGGATCTATTGTTTC+GGG | - | chr8_3:9373222-9373241 | Msa1275440:intron | 45.0% | |
| GTACCCGAAACAATAGATCC+TGG | + | chr8_3:9373228-9373247 | None:intergenic | 45.0% | |
| ! | GTAATGATAATGAGCCGGTG+CGG | + | chr8_3:9373250-9373269 | None:intergenic | 45.0% |
| ! | CCTGTGGTGAAGTATTTCTC+CGG | + | chr8_3:9373523-9373542 | None:intergenic | 45.0% |
| ACCGACGGAAATTAATCGAG+GGG | - | chr8_3:9373596-9373615 | Msa1275440:intron | 45.0% | |
| ACCCCTCGATTAATTTCCGT+CGG | + | chr8_3:9373600-9373619 | None:intergenic | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | - | chr8_3:9373647-9373666 | Msa1275440:intron | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | - | chr8_3:9373648-9373667 | Msa1275440:intron | 45.0% | |
| ! | CAGGTGCACATTTTCTACGT+TGG | + | chr8_3:9372837-9372856 | None:intergenic | 45.0% |
| TGGCTTGATCCTTAAGAGGA+GGG | + | chr8_3:9372966-9372985 | None:intergenic | 45.0% | |
| ATGGCTTGATCCTTAAGAGG+AGG | + | chr8_3:9372967-9372986 | None:intergenic | 45.0% | |
| CTCATGGCTTGATCCTTAAG+AGG | + | chr8_3:9372970-9372989 | None:intergenic | 45.0% | |
| CTCTTAAGGATCAAGCCATG+AGG | - | chr8_3:9372968-9372987 | Msa1275440:intron | 45.0% | |
| CCGAAACAATAGATCCTGGT+GGG | + | chr8_3:9373224-9373243 | None:intergenic | 45.0% | |
| CCCACCAGGATCTATTGTTT+CGG | - | chr8_3:9373221-9373240 | Msa1275440:intron | 45.0% | |
| CCACCAGGATCTATTGTTTC+GGG | - | chr8_3:9373222-9373241 | Msa1275440:intron | 45.0% | |
| GTACCCGAAACAATAGATCC+TGG | + | chr8_3:9373228-9373247 | None:intergenic | 45.0% | |
| ! | GTAATGATAATGAGCCGGTG+CGG | + | chr8_3:9373250-9373269 | None:intergenic | 45.0% |
| ! | CCTGTGGTGAAGTATTTCTC+CGG | + | chr8_3:9373523-9373542 | None:intergenic | 45.0% |
| ACCGACGGAAATTAATCGAG+GGG | - | chr8_3:9373596-9373615 | Msa1275440:intron | 45.0% | |
| ACCCCTCGATTAATTTCCGT+CGG | + | chr8_3:9373600-9373619 | None:intergenic | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | - | chr8_3:9373647-9373666 | Msa1275440:intron | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | - | chr8_3:9373648-9373667 | Msa1275440:intron | 45.0% | |
| ACATGCAGCACATGCTTGAG+TGG | + | chr8_3:9372809-9372828 | None:intergenic | 50.0% | |
| ! | ATGCGGGCTAATGATCCTGT+TGG | - | chr8_3:9373012-9373031 | Msa1275440:intron | 50.0% |
| CCCGAAACAATAGATCCTGG+TGG | + | chr8_3:9373225-9373244 | None:intergenic | 50.0% | |
| ! | TATTGTTTCGGGTACCGCAC+CGG | - | chr8_3:9373233-9373252 | Msa1275440:intron | 50.0% |
| CCGGAGAAATACTTCACCAC+AGG | - | chr8_3:9373520-9373539 | Msa1275440:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr8_3:9373625-9373644 | None:intergenic | 50.0% | |
| AAGGTCACGGGTTCAAGTCT+TGG | - | chr8_3:9373660-9373679 | Msa1275440:CDS | 50.0% | |
| ACATGCAGCACATGCTTGAG+TGG | + | chr8_3:9372809-9372828 | None:intergenic | 50.0% | |
| ! | ATGCGGGCTAATGATCCTGT+TGG | - | chr8_3:9373012-9373031 | Msa1275440:intron | 50.0% |
| CCCGAAACAATAGATCCTGG+TGG | + | chr8_3:9373225-9373244 | None:intergenic | 50.0% | |
| ! | TATTGTTTCGGGTACCGCAC+CGG | - | chr8_3:9373233-9373252 | Msa1275440:intron | 50.0% |
| CCGGAGAAATACTTCACCAC+AGG | - | chr8_3:9373520-9373539 | Msa1275440:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr8_3:9373625-9373644 | None:intergenic | 50.0% | |
| AAGGTCACGGGTTCAAGTCT+TGG | - | chr8_3:9373660-9373679 | Msa1275440:CDS | 50.0% | |
| CGGGCTAATGATCCTGTTGG+TGG | - | chr8_3:9373015-9373034 | Msa1275440:intron | 55.0% | |
| GGAAGGGGTCCCACCATTAT+TGG | + | chr8_3:9373732-9373751 | None:intergenic | 55.0% | |
| ! | ATAATGGTGGGACCCCTTCC+CGG | - | chr8_3:9373732-9373751 | Msa1275440:CDS | 55.0% |
| CTAAAGCTCCCGCATACGCA+GGG | + | chr8_3:9373759-9373778 | None:intergenic | 55.0% | |
| ACTAAAGCTCCCGCATACGC+AGG | + | chr8_3:9373760-9373779 | None:intergenic | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr8_3:9373764-9373783 | Msa1275440:CDS | 55.0% |
| CGGGCTAATGATCCTGTTGG+TGG | - | chr8_3:9373015-9373034 | Msa1275440:intron | 55.0% | |
| GGAAGGGGTCCCACCATTAT+TGG | + | chr8_3:9373732-9373751 | None:intergenic | 55.0% | |
| ! | ATAATGGTGGGACCCCTTCC+CGG | - | chr8_3:9373732-9373751 | Msa1275440:CDS | 55.0% |
| CTAAAGCTCCCGCATACGCA+GGG | + | chr8_3:9373759-9373778 | None:intergenic | 55.0% | |
| ACTAAAGCTCCCGCATACGC+AGG | + | chr8_3:9373760-9373779 | None:intergenic | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr8_3:9373764-9373783 | Msa1275440:CDS | 55.0% |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr8_3:9373614-9373633 | Msa1275440:intron | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr8_3:9373765-9373784 | Msa1275440:CDS | 60.0% |
| ACCGGGTTGCCCTTTACCGA+CGG | - | chr8_3:9373782-9373801 | Msa1275440:CDS | 60.0% | |
| TCCGTCGGTAAAGGGCAACC+CGG | + | chr8_3:9373786-9373805 | None:intergenic | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr8_3:9373614-9373633 | Msa1275440:intron | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr8_3:9373765-9373784 | Msa1275440:CDS | 60.0% |
| ACCGGGTTGCCCTTTACCGA+CGG | - | chr8_3:9373782-9373801 | Msa1275440:CDS | 60.0% | |
| TCCGTCGGTAAAGGGCAACC+CGG | + | chr8_3:9373786-9373805 | None:intergenic | 60.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | + | chr8_3:9373747-9373766 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | chr8_3:9373748-9373767 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | - | chr8_3:9373747-9373766 | Msa1275440:CDS | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | - | chr8_3:9373748-9373767 | Msa1275440:CDS | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | + | chr8_3:9373747-9373766 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | chr8_3:9373748-9373767 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | - | chr8_3:9373747-9373766 | Msa1275440:CDS | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | - | chr8_3:9373748-9373767 | Msa1275440:CDS | 65.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | + | chr8_3:9373749-9373768 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | chr8_3:9373753-9373772 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | + | chr8_3:9373754-9373773 | None:intergenic | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | + | chr8_3:9373749-9373768 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | chr8_3:9373753-9373772 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | + | chr8_3:9373754-9373773 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 9372781 | 9374417 | 9372781 | ID=Msa1275440;Name=Msa1275440 |
| chr8_3 | mRNA | 9372781 | 9374417 | 9372781 | ID=Msa1275440-mRNA-1;Parent=Msa1275440;Name=Msa1275440-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0|0|1|1|1|2|0|302 |
| chr8_3 | exon | 9373657 | 9374417 | 9373657 | ID=Msa1275440-mRNA-1:exon:3944;Parent=Msa1275440-mRNA-1 |
| chr8_3 | exon | 9372781 | 9372928 | 9372781 | ID=Msa1275440-mRNA-1:exon:3943;Parent=Msa1275440-mRNA-1 |
| chr8_3 | CDS | 9373657 | 9374417 | 9373657 | ID=Msa1275440-mRNA-1:cds;Parent=Msa1275440-mRNA-1 |
| chr8_3 | CDS | 9372781 | 9372928 | 9372781 | ID=Msa1275440-mRNA-1:cds;Parent=Msa1275440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
