Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1277530 | A0A072TMF0 | 84.341 | 364 | 18 | 6 | 1 | 336 | 1 | 353 | 0.0 | 568 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1277530 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1277530 | MtrunA17_Chr8g0346141 | 84.341 | 364 | 18 | 6 | 1 | 336 | 1 | 353 | 0.0 | 568 |
| Msa1277530 | MtrunA17_Chr3g0132851 | 69.501 | 341 | 76 | 6 | 1 | 316 | 1 | 338 | 5.86e-140 | 423 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1277530 | AT1G58220.2 | 40.575 | 313 | 142 | 13 | 4 | 290 | 6 | 300 | 6.18e-52 | 183 |
| Msa1277530 | AT1G58220.1 | 41.000 | 300 | 134 | 12 | 4 | 277 | 6 | 288 | 1.41e-51 | 183 |
| Msa1277530 | AT1G09710.1 | 39.661 | 295 | 145 | 10 | 4 | 276 | 9 | 292 | 3.96e-51 | 179 |
| Msa1277530 | AT1G09710.4 | 39.661 | 295 | 145 | 10 | 4 | 276 | 9 | 292 | 3.96e-51 | 179 |
| Msa1277530 | AT1G09710.2 | 40.426 | 282 | 136 | 9 | 4 | 264 | 9 | 279 | 1.17e-50 | 178 |
| Msa1277530 | AT1G09710.5 | 39.927 | 273 | 131 | 10 | 26 | 276 | 2 | 263 | 3.08e-45 | 162 |
| Msa1277530 | AT1G09710.3 | 39.927 | 273 | 131 | 10 | 26 | 276 | 2 | 263 | 3.08e-45 | 162 |
Find 103 sgRNAs with CRISPR-Local
Find 530 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTGTCAAGGGCTAAATTT+AGG | 0.180768 | 8_3:-13153493 | None:intergenic |
| TTCCAATCAAATTTGGTATC+AGG | 0.181230 | 8_3:-13148061 | None:intergenic |
| CAATTCATTCCAATCAAATT+TGG | 0.191519 | 8_3:-13148068 | None:intergenic |
| GACCTTATTGACGTTGTTTC+AGG | 0.199531 | 8_3:+13148024 | Msa1277530:CDS |
| AACTATTGGGAGAGGGGTTT+GGG | 0.216249 | 8_3:-13154458 | None:intergenic |
| CCTCAATTGTTGAGCTATTA+GGG | 0.224586 | 8_3:-13150912 | None:intergenic |
| GCCTCAATTGTTGAGCTATT+AGG | 0.234237 | 8_3:-13150913 | None:intergenic |
| TCTGTTGCACTTCTCTTAAT+AGG | 0.263867 | 8_3:-13151237 | None:intergenic |
| AAACTATTGGGAGAGGGGTT+TGG | 0.277241 | 8_3:-13154459 | None:intergenic |
| CTTTAATAGCAGTAAATACT+AGG | 0.296038 | 8_3:+13154498 | Msa1277530:three_prime_UTR |
| CATGCTTCACAGGCCAATTT+CGG | 0.296470 | 8_3:-13154332 | None:intergenic |
| ACTGGAAAATTTACAGTCAT+TGG | 0.296643 | 8_3:-13150937 | None:intergenic |
| TTCGGAGAAGGTAACCTTCT+TGG | 0.304445 | 8_3:-13147873 | None:intergenic |
| GTCCCCTGCGAAACCGAAAT+TGG | 0.330547 | 8_3:+13154319 | Msa1277530:CDS |
| AGAGATGCGGTGAAGGGAAT+TGG | 0.330563 | 8_3:+13151187 | Msa1277530:CDS |
| AGAAGTAATATGAAAACTAT+TGG | 0.339794 | 8_3:-13154472 | None:intergenic |
| CTTGTCAAGGGCTAAATTTA+GGG | 0.341996 | 8_3:-13153492 | None:intergenic |
| CAAATTTGATTGGAATGAAT+TGG | 0.371586 | 8_3:+13148069 | Msa1277530:CDS |
| GTTCTCGATGAACGGTAAAC+TGG | 0.372611 | 8_3:-13150955 | None:intergenic |
| TCGGAGAAGGTAACCTTCTT+GGG | 0.378162 | 8_3:-13147872 | None:intergenic |
| AAAGACGGCAGTGCCAATTC+AGG | 0.380490 | 8_3:+13153404 | Msa1277530:CDS |
| AAATACTAGGGCATTTAATT+CGG | 0.386625 | 8_3:+13154511 | Msa1277530:three_prime_UTR |
| ATGATTCCAGCTCGCAATCT+AGG | 0.387454 | 8_3:-13150317 | None:intergenic |
| TTCACAGCCCTCTGATTTGA+CGG | 0.395277 | 8_3:+13150990 | Msa1277530:CDS |
| CAATCAAGAGTATAAAAGTT+TGG | 0.407158 | 8_3:-13154631 | None:intergenic |
| TTCCTGAAACAACGTCAATA+AGG | 0.413081 | 8_3:-13148026 | None:intergenic |
| ACCCTGATACCAAATTTGAT+TGG | 0.413869 | 8_3:+13148059 | Msa1277530:CDS |
| TATCGCACAAACTAACTGTT+TGG | 0.415406 | 8_3:+13154433 | Msa1277530:three_prime_UTR |
| AAAAGAATGGTCAGAGGAAG+AGG | 0.418034 | 8_3:+13151140 | Msa1277530:CDS |
| ACAATCCGTCTTCACTTTGA+AGG | 0.422590 | 8_3:+13154396 | Msa1277530:three_prime_UTR |
| GGTCGCAGTGGATCCTGAAT+TGG | 0.437512 | 8_3:-13153417 | None:intergenic |
| TTAGAAACCAAGAGAATAGT+TGG | 0.438935 | 8_3:+13151084 | Msa1277530:CDS |
| GAAGTAATATGAAAACTATT+GGG | 0.440980 | 8_3:-13154471 | None:intergenic |
| GGTACCACCAACTATTCTCT+TGG | 0.446261 | 8_3:-13151091 | None:intergenic |
| CAGGCCAATTTCGGTTTCGC+AGG | 0.452133 | 8_3:-13154323 | None:intergenic |
| CTATGGCGCCGCTTGGCGTA+TGG | 0.469893 | 8_3:+13148139 | Msa1277530:CDS |
| TCAAAGTGAAGACGGATTGT+TGG | 0.471876 | 8_3:-13154393 | None:intergenic |
| GAGATGCGGTGAAGGGAATT+GGG | 0.473351 | 8_3:+13151188 | Msa1277530:CDS |
| TCCAATCAAATTTGGTATCA+GGG | 0.474839 | 8_3:-13148060 | None:intergenic |
| GCCGCTGCAACATTGTTTGA+AGG | 0.482329 | 8_3:+13154597 | Msa1277530:three_prime_UTR |
| TCAGATGCTATGGCGCCGCT+TGG | 0.503407 | 8_3:+13148132 | Msa1277530:CDS |
| AGAATATACTGCTGAACAGT+TGG | 0.509877 | 8_3:+13153457 | Msa1277530:CDS |
| CCCTAATAGCTCAACAATTG+AGG | 0.514916 | 8_3:+13150912 | Msa1277530:CDS |
| TTCAGCAGTATATTCTGTGT+TGG | 0.516435 | 8_3:-13153450 | None:intergenic |
| AGTCTCCACAGTTTGTAGTT+CGG | 0.518961 | 8_3:+13154263 | Msa1277530:CDS |
| CCAGTACCACAGCTTCCAAA+AGG | 0.521688 | 8_3:+13151112 | Msa1277530:CDS |
| CCGTTCATCGAGAACTTCAA+AGG | 0.526541 | 8_3:+13150963 | Msa1277530:CDS |
| GCTGTTCAGAGATGCGGTGA+AGG | 0.527721 | 8_3:+13151180 | Msa1277530:CDS |
| TGTGGAGATGCATGCTTCAC+AGG | 0.528464 | 8_3:-13154342 | None:intergenic |
| AATATGAAAACTATTGGGAG+AGG | 0.532094 | 8_3:-13154466 | None:intergenic |
| TCCGTCTTCACTTTGAAGGA+TGG | 0.532388 | 8_3:+13154400 | Msa1277530:three_prime_UTR |
| CCAGAGAGTATCAGATGCTA+TGG | 0.533322 | 8_3:+13148122 | Msa1277530:intron |
| TTACCGGGATCAGTCATTCC+AGG | 0.533788 | 8_3:-13153536 | None:intergenic |
| TATGAAAACTATTGGGAGAG+GGG | 0.535159 | 8_3:-13154464 | None:intergenic |
| AATTGGGTAGCCATGGCAAA+AGG | 0.538707 | 8_3:+13151204 | Msa1277530:CDS |
| CTCTGCTGAAAACGAAATAG+AGG | 0.540986 | 8_3:-13147801 | None:intergenic |
| CCTTTGAAGTTCTCGATGAA+CGG | 0.541805 | 8_3:-13150963 | None:intergenic |
| AAGTGCAACAGAATTGTCTC+AGG | 0.543345 | 8_3:+13151248 | Msa1277530:CDS |
| TTGGTGAACAAAACTTCCAC+TGG | 0.548762 | 8_3:+13148088 | Msa1277530:CDS |
| CCAAAAGGAAAAGAAAAGAA+TGG | 0.553085 | 8_3:+13151127 | Msa1277530:CDS |
| GATTACACATTTGCCTACAT+AGG | 0.556888 | 8_3:-13154699 | None:intergenic |
| GTCTGTTCCGTCAAATCAGA+GGG | 0.558000 | 8_3:-13150997 | None:intergenic |
| GCTCCTGGAATGACTGATCC+CGG | 0.561406 | 8_3:+13153533 | Msa1277530:CDS |
| GAAAAGAAAAGAATGGTCAG+AGG | 0.561735 | 8_3:+13151134 | Msa1277530:CDS |
| TGATGTAGCTTCAACATGTA+CGG | 0.566855 | 8_3:-13150346 | None:intergenic |
| ATATGAAAACTATTGGGAGA+GGG | 0.568061 | 8_3:-13154465 | None:intergenic |
| TGTCTGTTCCGTCAAATCAG+AGG | 0.568559 | 8_3:-13150998 | None:intergenic |
| ACCATCCTTCAAAGTGAAGA+CGG | 0.568675 | 8_3:-13154401 | None:intergenic |
| GCTGCAACATTGTTTGAAGG+TGG | 0.570199 | 8_3:+13154600 | Msa1277530:three_prime_UTR |
| AGGCCAATTTCGGTTTCGCA+GGG | 0.572888 | 8_3:-13154322 | None:intergenic |
| GGAAGAGGACAATCAGCTAC+GGG | 0.574165 | 8_3:+13151155 | Msa1277530:CDS |
| GGTAGATTCACTTAGCGTGC+GGG | 0.580813 | 8_3:-13150890 | None:intergenic |
| CTGTTCAGAGATGCGGTGAA+GGG | 0.582365 | 8_3:+13151181 | Msa1277530:CDS |
| GCCAGAAAATAATCCCAAGA+AGG | 0.583604 | 8_3:+13147859 | Msa1277530:CDS |
| GCAAAATTCTCCTTCCACAA+TGG | 0.584537 | 8_3:-13154546 | None:intergenic |
| CGGGCTGCTGTTCAGAGATG+CGG | 0.586482 | 8_3:+13151174 | Msa1277530:CDS |
| AGGAAGAGGACAATCAGCTA+CGG | 0.586801 | 8_3:+13151154 | Msa1277530:CDS |
| ACTATTGGGAGAGGGGTTTG+GGG | 0.587526 | 8_3:-13154457 | None:intergenic |
| TGAAGGGAATTGGGTAGCCA+TGG | 0.588079 | 8_3:+13151197 | Msa1277530:CDS |
| TTTAATAGCAGTAAATACTA+GGG | 0.588579 | 8_3:+13154499 | Msa1277530:three_prime_UTR |
| CATAAATCTTCCATTGTGGA+AGG | 0.596872 | 8_3:+13154536 | Msa1277530:three_prime_UTR |
| GGACCACAAGCTTGTTGAGA+CGG | 0.597179 | 8_3:-13154300 | None:intergenic |
| GGCACATAAATCTTCCATTG+TGG | 0.607895 | 8_3:+13154532 | Msa1277530:three_prime_UTR |
| ACCTTCAAACAATGTTGCAG+CGG | 0.611710 | 8_3:-13154598 | None:intergenic |
| GGGTAGATTCACTTAGCGTG+CGG | 0.613224 | 8_3:-13150891 | None:intergenic |
| CGTCCGTCTCAACAAGCTTG+TGG | 0.613705 | 8_3:+13154297 | Msa1277530:CDS |
| GAAGCATGCATCTCCACACA+TGG | 0.614884 | 8_3:+13154347 | Msa1277530:CDS |
| GTAGCTTCAACATGTACGGA+AGG | 0.615313 | 8_3:-13150342 | None:intergenic |
| GCTTGTTGAGACGGACGTTG+AGG | 0.616100 | 8_3:-13154291 | None:intergenic |
| AGGAACAACCATACGCCAAG+CGG | 0.617202 | 8_3:-13148147 | None:intergenic |
| ATTCACCTTCGCACATGCTG+AGG | 0.618037 | 8_3:-13150373 | None:intergenic |
| CTCAATTGTTGAGCTATTAG+GGG | 0.619081 | 8_3:-13150911 | None:intergenic |
| TAGTGACCTAGATTGCGAGC+TGG | 0.630707 | 8_3:+13150311 | Msa1277530:CDS |
| AGAGTCCTCAGCATGTGCGA+AGG | 0.635460 | 8_3:+13150368 | Msa1277530:CDS |
| TGCTACCGAACTACAAACTG+TGG | 0.639047 | 8_3:-13154268 | None:intergenic |
| GGCCAATTTCGGTTTCGCAG+GGG | 0.641281 | 8_3:-13154321 | None:intergenic |
| ATACCGTTGTGTGATTGAAG+CGG | 0.642344 | 8_3:-13147903 | None:intergenic |
| GAAACCAAGAGAATAGTTGG+TGG | 0.642501 | 8_3:+13151087 | Msa1277530:CDS |
| TTCTGTGTTGGTTGTCACAG+TGG | 0.646716 | 8_3:-13153438 | None:intergenic |
| GGTTGTCACAGTGGTCGCAG+TGG | 0.683356 | 8_3:-13153429 | None:intergenic |
| AGCGCTTTACGAAAGAAAGA+CGG | 0.703513 | 8_3:+13153389 | Msa1277530:CDS |
| GCATGCATCTCCACACATGG+AGG | 0.707617 | 8_3:+13154350 | Msa1277530:CDS |
| ACGCCGCTTCAATCACACAA+CGG | 0.764373 | 8_3:+13147900 | Msa1277530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATTATATTATTAATTA+AGG | + | chr8_3:13148809-13148828 | Msa1277530:intron | 0.0% |
| !!! | TTTAATTTAATTTTTATATA+TGG | + | chr8_3:13153796-13153815 | Msa1277530:intron | 0.0% |
| !!! | TTAATTTAATTTTTATATAT+GGG | + | chr8_3:13153797-13153816 | Msa1277530:intron | 0.0% |
| !! | TAAATATAGATAACAAAATA+GGG | - | chr8_3:13148574-13148593 | None:intergenic | 10.0% |
| !! | ATAAATATAGATAACAAAAT+AGG | - | chr8_3:13148575-13148594 | None:intergenic | 10.0% |
| !! | ATCTTATTAAAAAATAAAAG+CGG | - | chr8_3:13151494-13151513 | None:intergenic | 10.0% |
| !!! | AAATATTTAATATCTTTTCT+AGG | + | chr8_3:13153726-13153745 | Msa1277530:intron | 10.0% |
| !! | ATTATGATCATTATAATAAT+GGG | - | chr8_3:13153766-13153785 | None:intergenic | 10.0% |
| !! | TATTATGATCATTATAATAA+TGG | - | chr8_3:13153767-13153786 | None:intergenic | 10.0% |
| !! | AAGTTTCAAAAAAAATATAT+GGG | + | chr8_3:13154016-13154035 | Msa1277530:intron | 10.0% |
| !!! | TGCAAATAAATAAACTTTTA+TGG | + | chr8_3:13148398-13148417 | Msa1277530:intron | 15.0% |
| !! | AAATATAGATAACAAAATAG+GGG | - | chr8_3:13148573-13148592 | None:intergenic | 15.0% |
| !! | ATTTCTGATAATTGATTATT+TGG | + | chr8_3:13149294-13149313 | Msa1277530:intron | 15.0% |
| !! | TTTCTGATAATTGATTATTT+GGG | + | chr8_3:13149295-13149314 | Msa1277530:intron | 15.0% |
| !! | AAAGATAAAATAACGTTAAA+TGG | + | chr8_3:13149414-13149433 | Msa1277530:intron | 15.0% |
| !!! | TTTTTTGTTTTCATATTTTC+AGG | + | chr8_3:13150281-13150300 | Msa1277530:intron | 15.0% |
| !! | TTATTTATAAAGATCCTTAA+TGG | + | chr8_3:13150536-13150555 | Msa1277530:intron | 15.0% |
| !!! | AATGTTTTTACTGAAAAATA+TGG | + | chr8_3:13150698-13150717 | Msa1277530:intron | 15.0% |
| !!! | ACATAATTCATAAACTTTTA+GGG | - | chr8_3:13151285-13151304 | None:intergenic | 15.0% |
| !! | AATTTAGGTATAATTGAAAT+AGG | + | chr8_3:13151626-13151645 | Msa1277530:intron | 15.0% |
| !! | TATTCTATACTACTAATAAA+GGG | - | chr8_3:13151674-13151693 | None:intergenic | 15.0% |
| !! | AATTTAGGTATAATTGAAAT+AGG | + | chr8_3:13151626-13151645 | Msa1277530:intron | 15.0% |
| !!! | TAAATAAAGATTATTTTGCA+GGG | - | chr8_3:13152108-13152127 | None:intergenic | 15.0% |
| !!! | TTAAATAAAGATTATTTTGC+AGG | - | chr8_3:13152109-13152128 | None:intergenic | 15.0% |
| !! | TATGTAGTTTATTTAATCTT+TGG | + | chr8_3:13152479-13152498 | Msa1277530:intron | 15.0% |
| !!! | TGAATTTTGATAAATATTCA+TGG | - | chr8_3:13152664-13152683 | None:intergenic | 15.0% |
| !! | ATATTTATCAAAATTCATTC+TGG | + | chr8_3:13152667-13152686 | Msa1277530:intron | 15.0% |
| !!! | GTTTTAAGTTAAATATTGAT+AGG | + | chr8_3:13152738-13152757 | Msa1277530:intron | 15.0% |
| !!! | TCTTAAATATTACATTTTAC+TGG | + | chr8_3:13153034-13153053 | Msa1277530:intron | 15.0% |
| !!! | TTTTTTTGAAACTTGATATT+CGG | - | chr8_3:13154010-13154029 | None:intergenic | 15.0% |
| !! | CAAGTTTCAAAAAAAATATA+TGG | + | chr8_3:13154015-13154034 | Msa1277530:intron | 15.0% |
| !! | AAAAAATAAGTCAACTCAAA+TGG | - | chr8_3:13148371-13148390 | None:intergenic | 20.0% |
| !!! | TCATTTTGACTGTAAAAAAA+AGG | + | chr8_3:13149017-13149036 | Msa1277530:intron | 20.0% |
| !! | TTCTGATAATTGATTATTTG+GGG | + | chr8_3:13149296-13149315 | Msa1277530:intron | 20.0% |
| !! | TATCACAATACATTAATTCA+AGG | + | chr8_3:13149958-13149977 | Msa1277530:intron | 20.0% |
| !!! | AGTTTTTATTAGCAACATAA+AGG | + | chr8_3:13150042-13150061 | Msa1277530:intron | 20.0% |
| !! | AATACTGTTTCATTTAATAG+AGG | - | chr8_3:13150491-13150510 | None:intergenic | 20.0% |
| !! | TTGTAATTCTAGTAAAAATG+CGG | + | chr8_3:13150612-13150631 | Msa1277530:intron | 20.0% |
| !! | ATCTATCAAACAACAAAAAT+AGG | - | chr8_3:13150736-13150755 | None:intergenic | 20.0% |
| !!! | CACATAATTCATAAACTTTT+AGG | - | chr8_3:13151286-13151305 | None:intergenic | 20.0% |
| !! | CTAAAAGTTTATGAATTATG+TGG | + | chr8_3:13151284-13151303 | Msa1277530:intron | 20.0% |
| !! | GCAATTGAATCATAATTAAT+AGG | + | chr8_3:13151584-13151603 | Msa1277530:intron | 20.0% |
| !!! | AGAGTAATACTGTTTAATTT+AGG | + | chr8_3:13151611-13151630 | Msa1277530:intron | 20.0% |
| !! | ATTCTATACTACTAATAAAG+GGG | - | chr8_3:13151673-13151692 | None:intergenic | 20.0% |
| !! | CTATTCTATACTACTAATAA+AGG | - | chr8_3:13151675-13151694 | None:intergenic | 20.0% |
| !!! | TTATTCCTTCTGTTTAATTT+AGG | + | chr8_3:13151722-13151741 | Msa1277530:intron | 20.0% |
| !! | TTATACCTAAATTAAACAGA+AGG | - | chr8_3:13151730-13151749 | None:intergenic | 20.0% |
| !! | ATTCTATACTACTAATAAAG+GGG | - | chr8_3:13151673-13151692 | None:intergenic | 20.0% |
| !! | AGTTCTTCAAAATCATAAAA+AGG | + | chr8_3:13151925-13151944 | Msa1277530:intron | 20.0% |
| !! | GTTCTTCAAAATCATAAAAA+GGG | + | chr8_3:13151926-13151945 | Msa1277530:intron | 20.0% |
| !! | TTCTTCAAAATCATAAAAAG+GGG | + | chr8_3:13151927-13151946 | Msa1277530:intron | 20.0% |
| !!! | AAATAAAGATTATTTTGCAG+GGG | - | chr8_3:13152107-13152126 | None:intergenic | 20.0% |
| !! | GATTAATTCATACTGTTATA+GGG | - | chr8_3:13152435-13152454 | None:intergenic | 20.0% |
| !!! | TTTTATCATGCTGATTAATA+AGG | + | chr8_3:13152694-13152713 | Msa1277530:intron | 20.0% |
| !!! | AATGTTTAATCAGCTATTTT+AGG | + | chr8_3:13153213-13153232 | Msa1277530:intron | 20.0% |
| !! | TAATAGTCAATTAACAATGA+AGG | - | chr8_3:13153324-13153343 | None:intergenic | 20.0% |
| !! | AAGTTAACTTTATGTTATGA+TGG | + | chr8_3:13153684-13153703 | Msa1277530:intron | 20.0% |
| !!! | TTAATTTTTATATATGGGCA+AGG | + | chr8_3:13153802-13153821 | Msa1277530:intron | 20.0% |
| !!! | TAATTTTTATATATGGGCAA+GGG | + | chr8_3:13153803-13153822 | Msa1277530:intron | 20.0% |
| !! | GAAGTAATATGAAAACTATT+GGG | - | chr8_3:13154474-13154493 | None:intergenic | 20.0% |
| !! | AGAAGTAATATGAAAACTAT+TGG | - | chr8_3:13154475-13154494 | None:intergenic | 20.0% |
| !! | TTTAATAGCAGTAAATACTA+GGG | + | chr8_3:13154499-13154518 | Msa1277530:three_prime_UTR | 20.0% |
| ! | CAATTCATTCCAATCAAATT+TGG | - | chr8_3:13148071-13148090 | None:intergenic | 25.0% |
| ! | CAAATTTGATTGGAATGAAT+TGG | + | chr8_3:13148069-13148088 | Msa1277530:CDS | 25.0% |
| !! | AAGATACAATTTTCGTTAGT+GGG | + | chr8_3:13148467-13148486 | Msa1277530:intron | 25.0% |
| ! | AAAAAACAAGTCAATCCAAA+CGG | + | chr8_3:13148545-13148564 | Msa1277530:intron | 25.0% |
| ! | AATAATCATAGTTGTCAAAG+CGG | + | chr8_3:13148712-13148731 | Msa1277530:intron | 25.0% |
| ! | AATAAGCTATTTATCCAAAC+AGG | - | chr8_3:13149322-13149341 | None:intergenic | 25.0% |
| !!! | TAAGTTTTCTGAGACTATTT+TGG | - | chr8_3:13149533-13149552 | None:intergenic | 25.0% |
| ! | TTTGAATTACTGCAATGTAT+TGG | + | chr8_3:13149702-13149721 | Msa1277530:intron | 25.0% |
| !! | AACTGATTAGTCATAGAATA+TGG | - | chr8_3:13149930-13149949 | None:intergenic | 25.0% |
| !! | ATACTGGCACAATTTAATTT+CGG | + | chr8_3:13149985-13150004 | Msa1277530:intron | 25.0% |
| !!! | ATTTTTGTTTCGTAGATTCT+TGG | + | chr8_3:13150226-13150245 | Msa1277530:intron | 25.0% |
| ! | ATTAAATGAAACAGTATTCG+TGG | + | chr8_3:13150493-13150512 | Msa1277530:intron | 25.0% |
| ! | TTAAATGTGTGATTCCATTA+AGG | - | chr8_3:13150553-13150572 | None:intergenic | 25.0% |
| ! | TAAAGAAATGGTATAATGAC+TGG | - | chr8_3:13151316-13151335 | None:intergenic | 25.0% |
| ! | ATTTGTATTATGTATACCAG+CGG | + | chr8_3:13151353-13151372 | Msa1277530:intron | 25.0% |
| ! | TATAGAATAGATTTCATGTG+AGG | + | chr8_3:13151685-13151704 | Msa1277530:intron | 25.0% |
| ! | AGGAAAGAAAATACGTTTAA+AGG | + | chr8_3:13151898-13151917 | Msa1277530:intron | 25.0% |
| ! | GGATTAATTCATACTGTTAT+AGG | - | chr8_3:13152436-13152455 | None:intergenic | 25.0% |
| ! | AGTGTACATATATTGAATCT+TGG | - | chr8_3:13152517-13152536 | None:intergenic | 25.0% |
| ! | TTTGAATTTAAGGGAAAATC+AGG | - | chr8_3:13152572-13152591 | None:intergenic | 25.0% |
| !!! | CCTATCTGTTTTGAATTTAA+GGG | - | chr8_3:13152581-13152600 | None:intergenic | 25.0% |
| !!! | ACCTATCTGTTTTGAATTTA+AGG | - | chr8_3:13152582-13152601 | None:intergenic | 25.0% |
| ! | CTGATTAATAAGGTAGATAA+CGG | + | chr8_3:13152704-13152723 | Msa1277530:intron | 25.0% |
| ! | ACAGATATGTACACTAAATA+TGG | - | chr8_3:13152913-13152932 | None:intergenic | 25.0% |
| ! | ATCTCTTTCTTGATTCTAAA+AGG | + | chr8_3:13152955-13152974 | Msa1277530:intron | 25.0% |
| ! | AATTAACAATGAAGGTGAAA+TGG | - | chr8_3:13153316-13153335 | None:intergenic | 25.0% |
| ! | AAGAGTTAAATGACTATTAC+CGG | - | chr8_3:13153555-13153574 | None:intergenic | 25.0% |
| ! | AAAATACAACTAGCAAATTC+TGG | - | chr8_3:13153608-13153627 | None:intergenic | 25.0% |
| !! | TTTAATATCTTTTCTAGGCT+TGG | + | chr8_3:13153731-13153750 | Msa1277530:intron | 25.0% |
| !! | AATTTTTATATATGGGCAAG+GGG | + | chr8_3:13153804-13153823 | Msa1277530:intron | 25.0% |
| !! | TGCATTTTCCAGAATATTTA+TGG | - | chr8_3:13154109-13154128 | None:intergenic | 25.0% |
| ! | AGTTTCATTCTTTCAATGTA+AGG | + | chr8_3:13154137-13154156 | Msa1277530:intron | 25.0% |
| ! | TGAATAACTTAAATGATTGC+AGG | + | chr8_3:13154189-13154208 | Msa1277530:intron | 25.0% |
| ! | CTTTAATAGCAGTAAATACT+AGG | + | chr8_3:13154498-13154517 | Msa1277530:three_prime_UTR | 25.0% |
| !! | AAATACTAGGGCATTTAATT+CGG | + | chr8_3:13154511-13154530 | Msa1277530:three_prime_UTR | 25.0% |
| !! | CAATCAAGAGTATAAAAGTT+TGG | - | chr8_3:13154634-13154653 | None:intergenic | 25.0% |
| !! | TAAGATGTTTTATCCTATGT+AGG | + | chr8_3:13154686-13154705 | Msa1277530:three_prime_UTR | 25.0% |
| !! | TTTAGGGTTTTGCAACAATT+TGG | + | chr8_3:13147826-13147845 | Msa1277530:five_prime_UTR | 30.0% |
| ! | TTAGGGTTTTGCAACAATTT+GGG | + | chr8_3:13147827-13147846 | Msa1277530:five_prime_UTR | 30.0% |
| !!! | AATCGTTTTTTGTGTTTTGC+AGG | + | chr8_3:13147990-13148009 | Msa1277530:intron | 30.0% |
| TCCAATCAAATTTGGTATCA+GGG | - | chr8_3:13148063-13148082 | None:intergenic | 30.0% | |
| TTCCAATCAAATTTGGTATC+AGG | - | chr8_3:13148064-13148083 | None:intergenic | 30.0% | |
| AAAAATACTATGAGACCGAA+GGG | - | chr8_3:13148225-13148244 | None:intergenic | 30.0% | |
| AAAAAATACTATGAGACCGA+AGG | - | chr8_3:13148226-13148245 | None:intergenic | 30.0% | |
| CCTTGAATAATTGATGTATC+CGG | + | chr8_3:13148268-13148287 | Msa1277530:intron | 30.0% | |
| TATCTGCTTCATAAACAAAC+CGG | - | chr8_3:13148290-13148309 | None:intergenic | 30.0% | |
| ! | CTTCAGGTTAATTGAATAAC+CGG | - | chr8_3:13148315-13148334 | None:intergenic | 30.0% |
| ! | GAAGATACAATTTTCGTTAG+TGG | + | chr8_3:13148466-13148485 | Msa1277530:intron | 30.0% |
| AAAAACAAGTCAATCCAAAC+GGG | + | chr8_3:13148546-13148565 | Msa1277530:intron | 30.0% | |
| CAGTCAAAATGAAGAAGAAA+GGG | - | chr8_3:13149009-13149028 | None:intergenic | 30.0% | |
| ACAGTCAAAATGAAGAAGAA+AGG | - | chr8_3:13149010-13149029 | None:intergenic | 30.0% | |
| !! | ATTGGAAAGCACCTTAATTT+CGG | + | chr8_3:13149720-13149739 | Msa1277530:intron | 30.0% |
| TGTAGTAAGTAGTTCATACA+AGG | + | chr8_3:13149847-13149866 | Msa1277530:intron | 30.0% | |
| ! | ATTAATTCAAGGCATCATAC+TGG | + | chr8_3:13149969-13149988 | Msa1277530:intron | 30.0% |
| !!! | ACGTTCTTATTTTCATCATG+AGG | - | chr8_3:13150072-13150091 | None:intergenic | 30.0% |
| TGCAAATTTCTTTCTGATTG+TGG | + | chr8_3:13150577-13150596 | Msa1277530:intron | 30.0% | |
| GCAAATTTCTTTCTGATTGT+GGG | + | chr8_3:13150578-13150597 | Msa1277530:intron | 30.0% | |
| ATTAATATCTGACAGTGATG+CGG | + | chr8_3:13150645-13150664 | Msa1277530:intron | 30.0% | |
| TTGGTTATTCCACACTAAAT+GGG | - | chr8_3:13150762-13150781 | None:intergenic | 30.0% | |
| TGGAATAACCAAGTTCTTTA+TGG | + | chr8_3:13150770-13150789 | Msa1277530:intron | 30.0% | |
| CATTGAAACCATAAAGAACT+TGG | - | chr8_3:13150781-13150800 | None:intergenic | 30.0% | |
| ACTGGAAAATTTACAGTCAT+TGG | - | chr8_3:13150940-13150959 | None:intergenic | 30.0% | |
| TTAGAAACCAAGAGAATAGT+TGG | + | chr8_3:13151084-13151103 | Msa1277530:CDS | 30.0% | |
| ! | CCATTCTTTTCTTTTCCTTT+TGG | - | chr8_3:13151130-13151149 | None:intergenic | 30.0% |
| CCAAAAGGAAAAGAAAAGAA+TGG | + | chr8_3:13151127-13151146 | Msa1277530:CDS | 30.0% | |
| CTGAATTGCTGATAAAGAAA+TGG | - | chr8_3:13151328-13151347 | None:intergenic | 30.0% | |
| !! | ACATTTTGCACTTTAAAAGG+AGG | - | chr8_3:13151470-13151489 | None:intergenic | 30.0% |
| ! | GGAACATTTTGCACTTTAAA+AGG | - | chr8_3:13151473-13151492 | None:intergenic | 30.0% |
| CTATGGATATGGTAAAATAG+AGG | - | chr8_3:13151523-13151542 | None:intergenic | 30.0% | |
| TTCTCAGATTTAAATAGCAG+TGG | - | chr8_3:13151546-13151565 | None:intergenic | 30.0% | |
| ! | ACTTCTAGCTATTAATCAGA+AGG | - | chr8_3:13151841-13151860 | None:intergenic | 30.0% |
| TAGACCTCTTGTAAATGTAA+GGG | - | chr8_3:13152014-13152033 | None:intergenic | 30.0% | |
| ATAGACCTCTTGTAAATGTA+AGG | - | chr8_3:13152015-13152034 | None:intergenic | 30.0% | |
| CTATGTGACTAAAAAGTCAT+CGG | - | chr8_3:13152051-13152070 | None:intergenic | 30.0% | |
| ! | ATGGGATTTTACACAACATT+TGG | - | chr8_3:13152082-13152101 | None:intergenic | 30.0% |
| ! | GTGTTTAAGATTTGATTGCT+TGG | + | chr8_3:13152171-13152190 | Msa1277530:intron | 30.0% |
| ! | TTTAAGATTTGATTGCTTGG+TGG | + | chr8_3:13152174-13152193 | Msa1277530:intron | 30.0% |
| CTTGAGAAGAGTTTATAAAG+AGG | - | chr8_3:13152261-13152280 | None:intergenic | 30.0% | |
| GTTATATAATGCAGAATTCG+AGG | - | chr8_3:13152457-13152476 | None:intergenic | 30.0% | |
| CCCTTAAATTCAAAACAGAT+AGG | + | chr8_3:13152578-13152597 | Msa1277530:intron | 30.0% | |
| ! | ATTAATAAGGTAGATAACGG+TGG | + | chr8_3:13152707-13152726 | Msa1277530:intron | 30.0% |
| TCAACAAATCAACCATCTAT+AGG | - | chr8_3:13152780-13152799 | None:intergenic | 30.0% | |
| ! | TTTTTCTAACATGACAGTCT+TGG | + | chr8_3:13152832-13152851 | Msa1277530:intron | 30.0% |
| ATTAATACTACACATCTCCA+TGG | + | chr8_3:13153340-13153359 | Msa1277530:intron | 30.0% | |
| AGAGTTAAATGACTATTACC+GGG | - | chr8_3:13153554-13153573 | None:intergenic | 30.0% | |
| !! | CATAAGATCTGGCTTTAAAT+GGG | + | chr8_3:13153932-13153951 | Msa1277530:intron | 30.0% |
| TCAAAAAAAATATATGGGCG+AGG | + | chr8_3:13154021-13154040 | Msa1277530:intron | 30.0% | |
| CAAAAAAAATATATGGGCGA+GGG | + | chr8_3:13154022-13154041 | Msa1277530:intron | 30.0% | |
| AAAAAAAATATATGGGCGAG+GGG | + | chr8_3:13154023-13154042 | Msa1277530:intron | 30.0% | |
| AGAATATTTATGGACGTAGT+TGG | - | chr8_3:13154099-13154118 | None:intergenic | 30.0% | |
| AACTACGTCCATAAATATTC+TGG | + | chr8_3:13154098-13154117 | Msa1277530:intron | 30.0% | |
| TAACTTAAATGATTGCAGGT+AGG | + | chr8_3:13154193-13154212 | Msa1277530:intron | 30.0% | |
| !! | TTGATTTTTAATTGGTGTGG+AGG | - | chr8_3:13154220-13154239 | None:intergenic | 30.0% |
| !! | CTCTTGATTTTTAATTGGTG+TGG | - | chr8_3:13154223-13154242 | None:intergenic | 30.0% |
| ! | GTGTGCTCTTGATTTTTAAT+TGG | - | chr8_3:13154228-13154247 | None:intergenic | 30.0% |
| ATATGAAAACTATTGGGAGA+GGG | - | chr8_3:13154468-13154487 | None:intergenic | 30.0% | |
| AATATGAAAACTATTGGGAG+AGG | - | chr8_3:13154469-13154488 | None:intergenic | 30.0% | |
| !! | TTTTCATACATTTGGTTCCA+TGG | - | chr8_3:13154576-13154595 | None:intergenic | 30.0% |
| !! | TTGGGATTATTTTCTGGCAT+CGG | - | chr8_3:13147857-13147876 | None:intergenic | 35.0% |
| ! | ACCTTCTTGGGATTATTTTC+TGG | - | chr8_3:13147863-13147882 | None:intergenic | 35.0% |
| TTCCTGAAACAACGTCAATA+AGG | - | chr8_3:13148029-13148048 | None:intergenic | 35.0% | |
| ACCCTGATACCAAATTTGAT+TGG | + | chr8_3:13148059-13148078 | Msa1277530:CDS | 35.0% | |
| CCGGATACATCAATTATTCA+AGG | - | chr8_3:13148271-13148290 | None:intergenic | 35.0% | |
| TGTTTATGAAGCAGATACAC+CGG | + | chr8_3:13148293-13148312 | Msa1277530:intron | 35.0% | |
| CTAGGTCTCAAATATAAGCA+CGG | - | chr8_3:13148345-13148364 | None:intergenic | 35.0% | |
| ! | GTGCTTATATTTGAGACCTA+GGG | + | chr8_3:13148344-13148363 | Msa1277530:intron | 35.0% |
| AAAGCTATTCGAACAAAACG+AGG | - | chr8_3:13148646-13148665 | None:intergenic | 35.0% | |
| ATGTTTGCGTCTGTTATTGT+TGG | + | chr8_3:13148668-13148687 | Msa1277530:intron | 35.0% | |
| GATTAGAGATCTAGAGATCT+AGG | - | chr8_3:13148971-13148990 | None:intergenic | 35.0% | |
| ! | AGAACAGAGATGAGATTTTG+TGG | + | chr8_3:13149051-13149070 | Msa1277530:intron | 35.0% |
| TTTGCAGCTTATAACACAAG+TGG | + | chr8_3:13149340-13149359 | Msa1277530:intron | 35.0% | |
| !! | GTTTGGATTAGCTTATCTAC+TGG | - | chr8_3:13149558-13149577 | None:intergenic | 35.0% |
| GTAGATAAGCTAATCCAAAC+AGG | + | chr8_3:13149558-13149577 | Msa1277530:intron | 35.0% | |
| GCTAAAAGTTTCCAGAACTA+AGG | - | chr8_3:13149759-13149778 | None:intergenic | 35.0% | |
| CAAAGGCAGTACATGTAAAA+GGG | - | chr8_3:13150130-13150149 | None:intergenic | 35.0% | |
| ACAAAGGCAGTACATGTAAA+AGG | - | chr8_3:13150131-13150150 | None:intergenic | 35.0% | |
| TGTTTCGTAGATTCTTGGAT+AGG | + | chr8_3:13150231-13150250 | Msa1277530:intron | 35.0% | |
| TGATGTAGCTTCAACATGTA+CGG | - | chr8_3:13150349-13150368 | None:intergenic | 35.0% | |
| TTGCCTTATCATACAGCTAT+AGG | + | chr8_3:13150669-13150688 | Msa1277530:intron | 35.0% | |
| AGTCCTATAGCTGTATGATA+AGG | - | chr8_3:13150675-13150694 | None:intergenic | 35.0% | |
| ATAGATAGTCCCATTTAGTG+TGG | + | chr8_3:13150750-13150769 | Msa1277530:intron | 35.0% | |
| CTTGGTTATTCCACACTAAA+TGG | - | chr8_3:13150763-13150782 | None:intergenic | 35.0% | |
| CTCAATTGTTGAGCTATTAG+GGG | - | chr8_3:13150914-13150933 | None:intergenic | 35.0% | |
| CCTCAATTGTTGAGCTATTA+GGG | - | chr8_3:13150915-13150934 | None:intergenic | 35.0% | |
| GAAAAGAAAAGAATGGTCAG+AGG | + | chr8_3:13151134-13151153 | Msa1277530:CDS | 35.0% | |
| TCTGTTGCACTTCTCTTAAT+AGG | - | chr8_3:13151240-13151259 | None:intergenic | 35.0% | |
| GATTTAAATAGCAGTGGCTA+TGG | - | chr8_3:13151540-13151559 | None:intergenic | 35.0% | |
| ! | TTACACAACATTTGGAGTTG+TGG | - | chr8_3:13152074-13152093 | None:intergenic | 35.0% |
| !! | GATTATTTTGCAGGGGAAAT+GGG | - | chr8_3:13152100-13152119 | None:intergenic | 35.0% |
| !! | AGATTATTTTGCAGGGGAAA+TGG | - | chr8_3:13152101-13152120 | None:intergenic | 35.0% |
| CTAACTCATCCTTACAAAAC+CGG | + | chr8_3:13152214-13152233 | Msa1277530:intron | 35.0% | |
| !! | CATTACAAACCGGTTTTGTA+AGG | - | chr8_3:13152226-13152245 | None:intergenic | 35.0% |
| GAGAAGAGTTTATAAAGAGG+AGG | - | chr8_3:13152258-13152277 | None:intergenic | 35.0% | |
| ! | TTGAATCTTGGTGACAATCT+AGG | - | chr8_3:13152505-13152524 | None:intergenic | 35.0% |
| AATTTAAGGGAAAATCAGGC+TGG | - | chr8_3:13152568-13152587 | None:intergenic | 35.0% | |
| TATTGATAGGTCACAATCCA+TGG | + | chr8_3:13152751-13152770 | Msa1277530:intron | 35.0% | |
| AATCCATGGATTCCTATAGA+TGG | + | chr8_3:13152765-13152784 | Msa1277530:intron | 35.0% | |
| !! | AGATGGTTGATTTGTTGACA+TGG | + | chr8_3:13152782-13152801 | Msa1277530:intron | 35.0% |
| TATTTGTAAAACTCCGTTGC+CGG | - | chr8_3:13153155-13153174 | None:intergenic | 35.0% | |
| TCTATCCAATACTCTCTTAG+AGG | + | chr8_3:13153363-13153382 | Msa1277530:intron | 35.0% | |
| TTCAGCAGTATATTCTGTGT+TGG | - | chr8_3:13153453-13153472 | None:intergenic | 35.0% | |
| AGAATATACTGCTGAACAGT+TGG | + | chr8_3:13153457-13153476 | Msa1277530:CDS | 35.0% | |
| CTTGTCAAGGGCTAAATTTA+GGG | - | chr8_3:13153495-13153514 | None:intergenic | 35.0% | |
| !! | CTTTTTGAATGGCTTGTCAA+GGG | - | chr8_3:13153507-13153526 | None:intergenic | 35.0% |
| !! | ACTTTTTGAATGGCTTGTCA+AGG | - | chr8_3:13153508-13153527 | None:intergenic | 35.0% |
| ! | GGAGCAGTAAACTTTTTGAA+TGG | - | chr8_3:13153518-13153537 | None:intergenic | 35.0% |
| TTCAAAAAGTTTACTGCTCC+TGG | + | chr8_3:13153518-13153537 | Msa1277530:CDS | 35.0% | |
| !! | CAACTAGCAAATTCTGGAAT+TGG | - | chr8_3:13153602-13153621 | None:intergenic | 35.0% |
| ! | CCATTTAAAGCCAGATCTTA+TGG | - | chr8_3:13153934-13153953 | None:intergenic | 35.0% |
| !! | CCATAAGATCTGGCTTTAAA+TGG | + | chr8_3:13153931-13153950 | Msa1277530:intron | 35.0% |
| TTATGGACGTAGTTGGAAAA+TGG | - | chr8_3:13154092-13154111 | None:intergenic | 35.0% | |
| ! | TAAAAATTAGCCTCCATGTG+TGG | - | chr8_3:13154363-13154382 | None:intergenic | 35.0% |
| TATCGCACAAACTAACTGTT+TGG | + | chr8_3:13154433-13154452 | Msa1277530:three_prime_UTR | 35.0% | |
| TATGAAAACTATTGGGAGAG+GGG | - | chr8_3:13154467-13154486 | None:intergenic | 35.0% | |
| CATAAATCTTCCATTGTGGA+AGG | + | chr8_3:13154536-13154555 | Msa1277530:three_prime_UTR | 35.0% | |
| GATTACACATTTGCCTACAT+AGG | - | chr8_3:13154702-13154721 | None:intergenic | 35.0% | |
| GCCAGAAAATAATCCCAAGA+AGG | + | chr8_3:13147859-13147878 | Msa1277530:CDS | 40.0% | |
| ATACCGTTGTGTGATTGAAG+CGG | - | chr8_3:13147906-13147925 | None:intergenic | 40.0% | |
| ! | GACCTTATTGACGTTGTTTC+AGG | + | chr8_3:13148024-13148043 | Msa1277530:CDS | 40.0% |
| TTGGTGAACAAAACTTCCAC+TGG | + | chr8_3:13148088-13148107 | Msa1277530:CDS | 40.0% | |
| TCTGGCATTAGAAATACCAG+TGG | - | chr8_3:13148107-13148126 | None:intergenic | 40.0% | |
| ! | TCCCCTTGTTTGAAATCTTG+CGG | - | chr8_3:13148175-13148194 | None:intergenic | 40.0% |
| TAAGCACGGATTCTTTCTTC+AGG | - | chr8_3:13148331-13148350 | None:intergenic | 40.0% | |
| ! | CGTGCTTATATTTGAGACCT+AGG | + | chr8_3:13148343-13148362 | Msa1277530:intron | 40.0% |
| TAGTTGTCAAAGCGGAAATG+CGG | + | chr8_3:13148720-13148739 | Msa1277530:intron | 40.0% | |
| TGAAGACGATCTAGAGATCT+AGG | - | chr8_3:13148931-13148950 | None:intergenic | 40.0% | |
| ATTGCCTCTGTTGTCAATAG+CGG | - | chr8_3:13149263-13149282 | None:intergenic | 40.0% | |
| ! | TTGATTATTTGGGGCCTGTT+TGG | + | chr8_3:13149305-13149324 | Msa1277530:intron | 40.0% |
| TACAAGTGACGGTACTTATG+TGG | + | chr8_3:13149589-13149608 | Msa1277530:intron | 40.0% | |
| ACAAGTGACGGTACTTATGT+GGG | + | chr8_3:13149590-13149609 | Msa1277530:intron | 40.0% | |
| ATACCTGAGCTAACTACTGT+TGG | + | chr8_3:13149644-13149663 | Msa1277530:intron | 40.0% | |
| ATACCAACAGTAGTTAGCTC+AGG | - | chr8_3:13149650-13149669 | None:intergenic | 40.0% | |
| ! | TTTCCAGAACTAAGGCACTA+GGG | - | chr8_3:13149751-13149770 | None:intergenic | 40.0% |
| ! | GCTGCCTTTATTTGAGCATT+CGG | + | chr8_3:13149777-13149796 | Msa1277530:intron | 40.0% |
| GAAGCCGAATGCTCAAATAA+AGG | - | chr8_3:13149784-13149803 | None:intergenic | 40.0% | |
| GGCAATTGGAAGAGTAACAA+AGG | - | chr8_3:13150147-13150166 | None:intergenic | 40.0% | |
| ! | TCCAATTGCCATTTCCTGTT+AGG | + | chr8_3:13150157-13150176 | Msa1277530:intron | 40.0% |
| ACCTAACAGGAAATGGCAAT+TGG | - | chr8_3:13150161-13150180 | None:intergenic | 40.0% | |
| ! | ATTGCCATTTCCTGTTAGGT+TGG | + | chr8_3:13150161-13150180 | Msa1277530:intron | 40.0% |
| !! | TTCTTCAATTTTGACCAGCC+TGG | + | chr8_3:13150830-13150849 | Msa1277530:intron | 40.0% |
| CCCTAATAGCTCAACAATTG+AGG | + | chr8_3:13150912-13150931 | Msa1277530:CDS | 40.0% | |
| GCCTCAATTGTTGAGCTATT+AGG | - | chr8_3:13150916-13150935 | None:intergenic | 40.0% | |
| !! | CCTTTGAAGTTCTCGATGAA+CGG | - | chr8_3:13150966-13150985 | None:intergenic | 40.0% |
| TTCTGTCTCTGAACAGTAAC+TGG | - | chr8_3:13151036-13151055 | None:intergenic | 40.0% | |
| GAAACCAAGAGAATAGTTGG+TGG | + | chr8_3:13151087-13151106 | Msa1277530:CDS | 40.0% | |
| !! | TCTTTTCCTTTTGGAAGCTG+TGG | - | chr8_3:13151121-13151140 | None:intergenic | 40.0% |
| AAAAGAATGGTCAGAGGAAG+AGG | + | chr8_3:13151140-13151159 | Msa1277530:CDS | 40.0% | |
| ! | AAATCTGTCTCCTTTTGCCA+TGG | - | chr8_3:13151217-13151236 | None:intergenic | 40.0% |
| AAGTGCAACAGAATTGTCTC+AGG | + | chr8_3:13151248-13151267 | Msa1277530:CDS | 40.0% | |
| TATGTATACCAGCGGAAAGA+CGG | + | chr8_3:13151361-13151380 | Msa1277530:intron | 40.0% | |
| CGTTAAGCGCACTAGAAAAA+CGG | - | chr8_3:13151407-13151426 | None:intergenic | 40.0% | |
| !! | CGTTTTTCTAGTGCGCTTAA+CGG | + | chr8_3:13151405-13151424 | Msa1277530:intron | 40.0% |
| ! | GCACTTTAAAAGGAGGTAGA+TGG | - | chr8_3:13151463-13151482 | None:intergenic | 40.0% |
| AATAGCAGTGGCTATGGATA+TGG | - | chr8_3:13151534-13151553 | None:intergenic | 40.0% | |
| CCTCTTGTAAATGTAAGGGA+AGG | - | chr8_3:13152010-13152029 | None:intergenic | 40.0% | |
| CCTTCCCTTACATTTACAAG+AGG | + | chr8_3:13152007-13152026 | Msa1277530:intron | 40.0% | |
| ! | CTTGGTGGTTGTTGCAATTT+GGG | + | chr8_3:13152189-13152208 | Msa1277530:intron | 40.0% |
| ! | TTGGTGGTTGTTGCAATTTG+GGG | + | chr8_3:13152190-13152209 | Msa1277530:intron | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | - | chr8_3:13152216-13152235 | None:intergenic | 40.0% |
| !! | CAAAACCGGTTTGTAATGTG+TGG | + | chr8_3:13152228-13152247 | Msa1277530:intron | 40.0% |
| GGAAATTCCGCCTTTATTGT+GGG | - | chr8_3:13152398-13152417 | None:intergenic | 40.0% | |
| TGGAAATTCCGCCTTTATTG+TGG | - | chr8_3:13152399-13152418 | None:intergenic | 40.0% | |
| CATTGAATGCTCATTCTCTG+TGG | + | chr8_3:13152607-13152626 | Msa1277530:intron | 40.0% | |
| CAACCATCTATAGGAATCCA+TGG | - | chr8_3:13152771-13152790 | None:intergenic | 40.0% | |
| TAAACCGTTGTCATCTAGTC+AGG | + | chr8_3:13153088-13153107 | Msa1277530:intron | 40.0% | |
| ATTTGTAAAACTCCGTTGCC+GGG | - | chr8_3:13153154-13153173 | None:intergenic | 40.0% | |
| !! | AGAGAGTATTGGATAGACCA+TGG | - | chr8_3:13153360-13153379 | None:intergenic | 40.0% |
| ATCCAATACTCTCTTAGAGG+TGG | + | chr8_3:13153366-13153385 | Msa1277530:intron | 40.0% | |
| AGCGCTTTACGAAAGAAAGA+CGG | + | chr8_3:13153389-13153408 | Msa1277530:CDS | 40.0% | |
| GCTTGTCAAGGGCTAAATTT+AGG | - | chr8_3:13153496-13153515 | None:intergenic | 40.0% | |
| CTGTCAATTGTTGAGACTTC+AGG | - | chr8_3:13153658-13153677 | None:intergenic | 40.0% | |
| ATTCCCATCTGTGCCAATTT+CGG | + | chr8_3:13153899-13153918 | Msa1277530:intron | 40.0% | |
| TTTAAATGGGAACCCACAAG+TGG | + | chr8_3:13153945-13153964 | Msa1277530:intron | 40.0% | |
| ! | ATGGGATCTCAAGGATTAGT+CGG | + | chr8_3:13153976-13153995 | Msa1277530:intron | 40.0% |
| TGTAAGGCTCGTGAATCTAA+TGG | + | chr8_3:13154153-13154172 | Msa1277530:intron | 40.0% | |
| AGTCTCCACAGTTTGTAGTT+CGG | + | chr8_3:13154263-13154282 | Msa1277530:CDS | 40.0% | |
| !! | TCAAAGTGAAGACGGATTGT+TGG | - | chr8_3:13154396-13154415 | None:intergenic | 40.0% |
| ACAATCCGTCTTCACTTTGA+AGG | + | chr8_3:13154396-13154415 | Msa1277530:three_prime_UTR | 40.0% | |
| ACCATCCTTCAAAGTGAAGA+CGG | - | chr8_3:13154404-13154423 | None:intergenic | 40.0% | |
| GGCACATAAATCTTCCATTG+TGG | + | chr8_3:13154532-13154551 | Msa1277530:three_prime_UTR | 40.0% | |
| GCAAAATTCTCCTTCCACAA+TGG | - | chr8_3:13154549-13154568 | None:intergenic | 40.0% | |
| ! | TTGTGGAAGGAGAATTTTGC+TGG | + | chr8_3:13154549-13154568 | Msa1277530:three_prime_UTR | 40.0% |
| !!! | CAGCGGCTTTTTCATACATT+TGG | - | chr8_3:13154584-13154603 | None:intergenic | 40.0% |
| ACCTTCAAACAATGTTGCAG+CGG | - | chr8_3:13154601-13154620 | None:intergenic | 40.0% | |
| ! | TCGTTTTCAGCAGAGGGTTT+AGG | + | chr8_3:13147809-13147828 | Msa1277530:five_prime_UTR | 45.0% |
| ! | CGTTTTCAGCAGAGGGTTTA+GGG | + | chr8_3:13147810-13147829 | Msa1277530:five_prime_UTR | 45.0% |
| TCGGAGAAGGTAACCTTCTT+GGG | - | chr8_3:13147875-13147894 | None:intergenic | 45.0% | |
| TTCGGAGAAGGTAACCTTCT+TGG | - | chr8_3:13147876-13147895 | None:intergenic | 45.0% | |
| CCATAGCATCTGATACTCTC+TGG | - | chr8_3:13148125-13148144 | None:intergenic | 45.0% | |
| !! | CCAGAGAGTATCAGATGCTA+TGG | + | chr8_3:13148122-13148141 | Msa1277530:intron | 45.0% |
| ! | TTGTTTGAAATCTTGCGGCG+AGG | - | chr8_3:13148170-13148189 | None:intergenic | 45.0% |
| TCGCCGCAAGATTTCAAACA+AGG | + | chr8_3:13148169-13148188 | Msa1277530:intron | 45.0% | |
| CGCCGCAAGATTTCAAACAA+GGG | + | chr8_3:13148170-13148189 | Msa1277530:intron | 45.0% | |
| GCCGCAAGATTTCAAACAAG+GGG | + | chr8_3:13148171-13148190 | Msa1277530:intron | 45.0% | |
| AGTCAACTCAAATGGACCCT+AGG | - | chr8_3:13148363-13148382 | None:intergenic | 45.0% | |
| AACAAAATAGGGGACCCGTT+TGG | - | chr8_3:13148563-13148582 | None:intergenic | 45.0% | |
| GATCAACGCGGGCAAAAAAT+GGG | - | chr8_3:13149101-13149120 | None:intergenic | 45.0% | |
| TTGTCAATAGCGGTCTAACG+CGG | - | chr8_3:13149253-13149272 | None:intergenic | 45.0% | |
| TAGACCGCTATTGACAACAG+AGG | + | chr8_3:13149256-13149275 | Msa1277530:intron | 45.0% | |
| CTTGTAACAAGAGGCCTGTT+TGG | - | chr8_3:13149575-13149594 | None:intergenic | 45.0% | |
| AGGCCTCTTGTTACAAGTGA+CGG | + | chr8_3:13149578-13149597 | Msa1277530:intron | 45.0% | |
| GTACCGTCACTTGTAACAAG+AGG | - | chr8_3:13149584-13149603 | None:intergenic | 45.0% | |
| CTAGGGGAAGACCGAAATTA+AGG | - | chr8_3:13149734-13149753 | None:intergenic | 45.0% | |
| ! | TTCCAGAACTAAGGCACTAG+GGG | - | chr8_3:13149750-13149769 | None:intergenic | 45.0% |
| ! | GTTTCCAGAACTAAGGCACT+AGG | - | chr8_3:13149752-13149771 | None:intergenic | 45.0% |
| CACCACATAACTGGTGCTTA+AGG | - | chr8_3:13149888-13149907 | None:intergenic | 45.0% | |
| CTAGTGCATCACCACATAAC+TGG | - | chr8_3:13149897-13149916 | None:intergenic | 45.0% | |
| AGGCAGTACATGTAAAAGGG+TGG | - | chr8_3:13150127-13150146 | None:intergenic | 45.0% | |
| TGTGCCAACCTAACAGGAAA+TGG | - | chr8_3:13150168-13150187 | None:intergenic | 45.0% | |
| ATGATTCCAGCTCGCAATCT+AGG | - | chr8_3:13150320-13150339 | None:intergenic | 45.0% | |
| GTAGCTTCAACATGTACGGA+AGG | - | chr8_3:13150345-13150364 | None:intergenic | 45.0% | |
| !! | ATTTTGACCAGCCTGGTTCT+CGG | + | chr8_3:13150837-13150856 | Msa1277530:intron | 45.0% |
| ATTAAACAACGCCGAGAACC+AGG | - | chr8_3:13150851-13150870 | None:intergenic | 45.0% | |
| CTCGGCGTTGTTTAATCATC+AGG | + | chr8_3:13150855-13150874 | Msa1277530:intron | 45.0% | |
| GTTCTCGATGAACGGTAAAC+TGG | - | chr8_3:13150958-13150977 | None:intergenic | 45.0% | |
| CCGTTCATCGAGAACTTCAA+AGG | + | chr8_3:13150963-13150982 | Msa1277530:CDS | 45.0% | |
| ! | TTCACAGCCCTCTGATTTGA+CGG | + | chr8_3:13150990-13151009 | Msa1277530:CDS | 45.0% |
| GTCTGTTCCGTCAAATCAGA+GGG | - | chr8_3:13151000-13151019 | None:intergenic | 45.0% | |
| TGTCTGTTCCGTCAAATCAG+AGG | - | chr8_3:13151001-13151020 | None:intergenic | 45.0% | |
| GGTACCACCAACTATTCTCT+TGG | - | chr8_3:13151094-13151113 | None:intergenic | 45.0% | |
| AGGAAGAGGACAATCAGCTA+CGG | + | chr8_3:13151154-13151173 | Msa1277530:CDS | 45.0% | |
| AATTGGGTAGCCATGGCAAA+AGG | + | chr8_3:13151204-13151223 | Msa1277530:CDS | 45.0% | |
| TGCAACAGAATTGTCTCAGG+TGG | + | chr8_3:13151251-13151270 | Msa1277530:intron | 45.0% | |
| ATGTATACCAGCGGAAAGAC+GGG | + | chr8_3:13151362-13151381 | Msa1277530:intron | 45.0% | |
| CACTAGAAAAACGGATAGGC+GGG | - | chr8_3:13151398-13151417 | None:intergenic | 45.0% | |
| GCACTAGAAAAACGGATAGG+CGG | - | chr8_3:13151399-13151418 | None:intergenic | 45.0% | |
| AGCGCACTAGAAAAACGGAT+AGG | - | chr8_3:13151402-13151421 | None:intergenic | 45.0% | |
| ! | AAAGTCATCGGCTGACGTTA+TGG | - | chr8_3:13152039-13152058 | None:intergenic | 45.0% |
| ! | GCTTGGTGGTTGTTGCAATT+TGG | + | chr8_3:13152188-13152207 | Msa1277530:intron | 45.0% |
| GCACTCCACACATTACAAAC+CGG | - | chr8_3:13152236-13152255 | None:intergenic | 45.0% | |
| AGAGTCCTATCTATCCGATG+TGG | + | chr8_3:13152279-13152298 | Msa1277530:intron | 45.0% | |
| GAGTCCTATCTATCCGATGT+GGG | + | chr8_3:13152280-13152299 | Msa1277530:intron | 45.0% | |
| TAGTCCCACATCGGATAGAT+AGG | - | chr8_3:13152287-13152306 | None:intergenic | 45.0% | |
| CTGCAATGTAGGCAAACCAA+AGG | + | chr8_3:13152348-13152367 | Msa1277530:intron | 45.0% | |
| CAAACCAAAGGCCGCAATTT+AGG | + | chr8_3:13152360-13152379 | Msa1277530:intron | 45.0% | |
| AAAGGCGGAATTTCCAACAG+TGG | + | chr8_3:13152403-13152422 | Msa1277530:intron | 45.0% | |
| TATAGGGCTATGACCACTGT+TGG | - | chr8_3:13152419-13152438 | None:intergenic | 45.0% | |
| TAAGGGAAAATCAGGCTGGT+AGG | - | chr8_3:13152564-13152583 | None:intergenic | 45.0% | |
| ! | ATAAGGTAGATAACGGTGGC+AGG | + | chr8_3:13152711-13152730 | Msa1277530:intron | 45.0% |
| ACTACAGTAGCTGCTAGATC+TGG | - | chr8_3:13152872-13152891 | None:intergenic | 45.0% | |
| TACTGTAGTTGTGCCTGTTG+AGG | + | chr8_3:13152883-13152902 | Msa1277530:intron | 45.0% | |
| TAAATATGGCCAGCCTCAAC+AGG | - | chr8_3:13152899-13152918 | None:intergenic | 45.0% | |
| TACTGGAGTCTGATGACTGA+TGG | + | chr8_3:13153051-13153070 | Msa1277530:intron | 45.0% | |
| CTGACCTGACTAGATGACAA+CGG | - | chr8_3:13153095-13153114 | None:intergenic | 45.0% | |
| ATCTAGTCAGGTCAGATGTC+TGG | + | chr8_3:13153100-13153119 | Msa1277530:intron | 45.0% | |
| TCTAGTCAGGTCAGATGTCT+GGG | + | chr8_3:13153101-13153120 | Msa1277530:intron | 45.0% | |
| ! | CTCCACCTCTAAGAGAGTAT+TGG | - | chr8_3:13153371-13153390 | None:intergenic | 45.0% |
| !! | TTCTGTGTTGGTTGTCACAG+TGG | - | chr8_3:13153441-13153460 | None:intergenic | 45.0% |
| ! | TCTTTTCTAGGCTTGGCAAC+AGG | + | chr8_3:13153738-13153757 | Msa1277530:intron | 45.0% |
| ! | CTTTTCTAGGCTTGGCAACA+GGG | + | chr8_3:13153739-13153758 | Msa1277530:intron | 45.0% |
| !! | TCAAGGATTAGTCGGTCCTT+GGG | + | chr8_3:13153984-13154003 | Msa1277530:intron | 45.0% |
| GAAACTTGATATTCGGCCCA+AGG | - | chr8_3:13154003-13154022 | None:intergenic | 45.0% | |
| TGCTACCGAACTACAAACTG+TGG | - | chr8_3:13154271-13154290 | None:intergenic | 45.0% | |
| CATGCTTCACAGGCCAATTT+CGG | - | chr8_3:13154335-13154354 | None:intergenic | 45.0% | |
| ! | TCCGTCTTCACTTTGAAGGA+TGG | + | chr8_3:13154400-13154419 | Msa1277530:three_prime_UTR | 45.0% |
| AACTATTGGGAGAGGGGTTT+GGG | - | chr8_3:13154461-13154480 | None:intergenic | 45.0% | |
| AAACTATTGGGAGAGGGGTT+TGG | - | chr8_3:13154462-13154481 | None:intergenic | 45.0% | |
| ! | AGGAGAATTTTGCTGGTCCA+TGG | + | chr8_3:13154556-13154575 | Msa1277530:three_prime_UTR | 45.0% |
| GCTGCAACATTGTTTGAAGG+TGG | + | chr8_3:13154600-13154619 | Msa1277530:three_prime_UTR | 45.0% | |
| !! | GATTGAAGCGGCGTCGTTTT+CGG | - | chr8_3:13147894-13147913 | None:intergenic | 50.0% |
| ACGCCGCTTCAATCACACAA+CGG | + | chr8_3:13147900-13147919 | Msa1277530:CDS | 50.0% | |
| AGGAACAACCATACGCCAAG+CGG | - | chr8_3:13148150-13148169 | None:intergenic | 50.0% | |
| ACAAGGGGACGATGAACCTA+TGG | + | chr8_3:13148186-13148205 | Msa1277530:intron | 50.0% | |
| ! | AGACCGAAGGGAGTATGAGA+CGG | - | chr8_3:13148213-13148232 | None:intergenic | 50.0% |
| GGATCAACGCGGGCAAAAAA+TGG | - | chr8_3:13149102-13149121 | None:intergenic | 50.0% | |
| AGGCCAATGCGGAACAATAG+CGG | - | chr8_3:13149165-13149184 | None:intergenic | 50.0% | |
| TTCCCCTAGTGCCTTAGTTC+TGG | + | chr8_3:13149745-13149764 | Msa1277530:intron | 50.0% | |
| CGCCTTAAGCACCAGTTATG+TGG | + | chr8_3:13149883-13149902 | Msa1277530:intron | 50.0% | |
| GCTGATTGTGCCAACCTAAC+AGG | - | chr8_3:13150174-13150193 | None:intergenic | 50.0% | |
| TAGTGACCTAGATTGCGAGC+TGG | + | chr8_3:13150311-13150330 | Msa1277530:CDS | 50.0% | |
| ATTCACCTTCGCACATGCTG+AGG | - | chr8_3:13150376-13150395 | None:intergenic | 50.0% | |
| GGTAGATTCACTTAGCGTGC+GGG | - | chr8_3:13150893-13150912 | None:intergenic | 50.0% | |
| GGGTAGATTCACTTAGCGTG+CGG | - | chr8_3:13150894-13150913 | None:intergenic | 50.0% | |
| !! | CCTTTTGGAAGCTGTGGTAC+TGG | - | chr8_3:13151115-13151134 | None:intergenic | 50.0% |
| CCAGTACCACAGCTTCCAAA+AGG | + | chr8_3:13151112-13151131 | Msa1277530:CDS | 50.0% | |
| GGAAGAGGACAATCAGCTAC+GGG | + | chr8_3:13151155-13151174 | Msa1277530:CDS | 50.0% | |
| CTGTTCAGAGATGCGGTGAA+GGG | + | chr8_3:13151181-13151200 | Msa1277530:CDS | 50.0% | |
| AGAGATGCGGTGAAGGGAAT+TGG | + | chr8_3:13151187-13151206 | Msa1277530:CDS | 50.0% | |
| GAGATGCGGTGAAGGGAATT+GGG | + | chr8_3:13151188-13151207 | Msa1277530:CDS | 50.0% | |
| TGAAGGGAATTGGGTAGCCA+TGG | + | chr8_3:13151197-13151216 | Msa1277530:CDS | 50.0% | |
| TGTGAACAGTCATGCCCATC+AGG | + | chr8_3:13151864-13151883 | Msa1277530:intron | 50.0% | |
| GTGAACAGTCATGCCCATCA+GGG | + | chr8_3:13151865-13151884 | Msa1277530:intron | 50.0% | |
| CCTTTCTTCACTGCCCTGAT+GGG | - | chr8_3:13151881-13151900 | None:intergenic | 50.0% | |
| TCCTTTCTTCACTGCCCTGA+TGG | - | chr8_3:13151882-13151901 | None:intergenic | 50.0% | |
| CTACAAAGCTTCTGCCACGA+GGG | + | chr8_3:13151960-13151979 | Msa1277530:intron | 50.0% | |
| GATGCAAGTTACCCCTTCTC+TGG | - | chr8_3:13151988-13152007 | None:intergenic | 50.0% | |
| ! | GGGTGGATTTAGTCCCACAT+CGG | - | chr8_3:13152296-13152315 | None:intergenic | 50.0% |
| !! | TCATCGTGTTGGCTTTGAGG+GGG | - | chr8_3:13152316-13152335 | None:intergenic | 50.0% |
| !! | CTCATCGTGTTGGCTTTGAG+GGG | - | chr8_3:13152317-13152336 | None:intergenic | 50.0% |
| !! | CCTCATCGTGTTGGCTTTGA+GGG | - | chr8_3:13152318-13152337 | None:intergenic | 50.0% |
| CCTCAAAGCCAACACGATGA+GGG | + | chr8_3:13152316-13152335 | Msa1277530:intron | 50.0% | |
| TCAGATGTCTGGGTATCACC+CGG | + | chr8_3:13153111-13153130 | Msa1277530:intron | 50.0% | |
| AAAGACGGCAGTGCCAATTC+AGG | + | chr8_3:13153404-13153423 | Msa1277530:CDS | 50.0% | |
| TTACCGGGATCAGTCATTCC+AGG | - | chr8_3:13153539-13153558 | None:intergenic | 50.0% | |
| GTTGAGACTTCAGGCGAACA+AGG | - | chr8_3:13153649-13153668 | None:intergenic | 50.0% | |
| ACCATCCAGACAACCCAAGT+GGG | - | chr8_3:13153832-13153851 | None:intergenic | 50.0% | |
| ! | TTGGGTTGTCTGGATGGTGT+TGG | + | chr8_3:13153834-13153853 | Msa1277530:intron | 50.0% |
| !! | TTGTCTGGATGGTGTTGGCT+TGG | + | chr8_3:13153839-13153858 | Msa1277530:intron | 50.0% |
| !! | TGTCTGGATGGTGTTGGCTT+GGG | + | chr8_3:13153840-13153859 | Msa1277530:intron | 50.0% |
| ATCGAACCTGAGACCTTGAG+AGG | - | chr8_3:13153881-13153900 | None:intergenic | 50.0% | |
| CCACCGAAATTGGCACAGAT+GGG | - | chr8_3:13153905-13153924 | None:intergenic | 50.0% | |
| CCATCTGTGCCAATTTCGGT+GGG | + | chr8_3:13153903-13153922 | Msa1277530:intron | 50.0% | |
| !! | ATGGACTAGCCCACCGAAAT+TGG | - | chr8_3:13153915-13153934 | None:intergenic | 50.0% |
| !! | GTGGGCTAGTCCATAAGATC+TGG | + | chr8_3:13153921-13153940 | Msa1277530:intron | 50.0% |
| AATGGGAACCCACAAGTGGA+CGG | + | chr8_3:13153949-13153968 | Msa1277530:intron | 50.0% | |
| !! | CTCAAGGATTAGTCGGTCCT+TGG | + | chr8_3:13153983-13154002 | Msa1277530:intron | 50.0% |
| AAAATATATGGGCGAGGGGC+AGG | + | chr8_3:13154027-13154046 | Msa1277530:intron | 50.0% | |
| AAATATATGGGCGAGGGGCA+GGG | + | chr8_3:13154028-13154047 | Msa1277530:intron | 50.0% | |
| !! | GGACCACAAGCTTGTTGAGA+CGG | - | chr8_3:13154303-13154322 | None:intergenic | 50.0% |
| AGGCCAATTTCGGTTTCGCA+GGG | - | chr8_3:13154325-13154344 | None:intergenic | 50.0% | |
| TGTGGAGATGCATGCTTCAC+AGG | - | chr8_3:13154345-13154364 | None:intergenic | 50.0% | |
| GAAGCATGCATCTCCACACA+TGG | + | chr8_3:13154347-13154366 | Msa1277530:CDS | 50.0% | |
| ACTATTGGGAGAGGGGTTTG+GGG | - | chr8_3:13154460-13154479 | None:intergenic | 50.0% | |
| GCCGCTGCAACATTGTTTGA+AGG | + | chr8_3:13154597-13154616 | Msa1277530:three_prime_UTR | 50.0% | |
| ! | GGGAGTATGAGACGGACCAT+AGG | - | chr8_3:13148205-13148224 | None:intergenic | 55.0% |
| GGTCCGTCTCATACTCCCTT+CGG | + | chr8_3:13148207-13148226 | Msa1277530:intron | 55.0% | |
| !! | CGTCGCGTCAATTTTTGGGG+TGG | - | chr8_3:13148756-13148775 | None:intergenic | 55.0% |
| ! | CCGCGTCGCGTCAATTTTTG+GGG | - | chr8_3:13148759-13148778 | None:intergenic | 55.0% |
| CCCCAAAAATTGACGCGACG+CGG | + | chr8_3:13148756-13148775 | Msa1277530:intron | 55.0% | |
| ! | CCCGCGTCGCGTCAATTTTT+GGG | - | chr8_3:13148760-13148779 | None:intergenic | 55.0% |
| CCCAAAAATTGACGCGACGC+GGG | + | chr8_3:13148757-13148776 | Msa1277530:intron | 55.0% | |
| GCGGGCGCTATTACATGAAG+CGG | + | chr8_3:13148775-13148794 | Msa1277530:intron | 55.0% | |
| GGCAAAAAGCGGATCAACGC+GGG | - | chr8_3:13149112-13149131 | None:intergenic | 55.0% | |
| GGGCAAAAAGCGGATCAACG+CGG | - | chr8_3:13149113-13149132 | None:intergenic | 55.0% | |
| !! | GAACAATAGCGGGTCAACGC+GGG | - | chr8_3:13149154-13149173 | None:intergenic | 55.0% |
| !! | GGAACAATAGCGGGTCAACG+CGG | - | chr8_3:13149155-13149174 | None:intergenic | 55.0% |
| GACCCGCTATTGTTCCGCAT+TGG | + | chr8_3:13149159-13149178 | Msa1277530:intron | 55.0% | |
| GGCCAATGCGGAACAATAGC+GGG | - | chr8_3:13149164-13149183 | None:intergenic | 55.0% | |
| AGTCGTGCGTTAGGCCAATG+CGG | - | chr8_3:13149176-13149195 | None:intergenic | 55.0% | |
| ! | CATTGGCCTAACGCACGACT+CGG | + | chr8_3:13149176-13149195 | Msa1277530:intron | 55.0% |
| ATTCGGCTTCGTCACTGTGC+TGG | + | chr8_3:13149794-13149813 | Msa1277530:intron | 55.0% | |
| TTCGGCTTCGTCACTGTGCT+GGG | + | chr8_3:13149795-13149814 | Msa1277530:intron | 55.0% | |
| AGAGTCCTCAGCATGTGCGA+AGG | + | chr8_3:13150368-13150387 | Msa1277530:CDS | 55.0% | |
| GCTGTTCAGAGATGCGGTGA+AGG | + | chr8_3:13151180-13151199 | Msa1277530:CDS | 55.0% | |
| GTTAGTTCCCGTCTTTCCGC+TGG | - | chr8_3:13151372-13151391 | None:intergenic | 55.0% | |
| CCCATCAGGGCAGTGAAGAA+AGG | + | chr8_3:13151878-13151897 | Msa1277530:intron | 55.0% | |
| ! | GGCAGAAGCTTTGTAGCAGC+AGG | - | chr8_3:13151956-13151975 | None:intergenic | 55.0% |
| GCTACAAAGCTTCTGCCACG+AGG | + | chr8_3:13151959-13151978 | Msa1277530:intron | 55.0% | |
| CCCTCAAAGCCAACACGATG+AGG | + | chr8_3:13152315-13152334 | Msa1277530:intron | 55.0% | |
| !! | CCCTCATCGTGTTGGCTTTG+AGG | - | chr8_3:13152319-13152338 | None:intergenic | 55.0% |
| ! | AGCCAACACGATGAGGGTGT+TGG | + | chr8_3:13152322-13152341 | Msa1277530:intron | 55.0% |
| CTCCAACACCCTCATCGTGT+TGG | - | chr8_3:13152327-13152346 | None:intergenic | 55.0% | |
| !! | CAACACGATGAGGGTGTTGG+AGG | + | chr8_3:13152325-13152344 | Msa1277530:intron | 55.0% |
| ! | GGTGTTGGAGGCTGCAATGT+AGG | + | chr8_3:13152337-13152356 | Msa1277530:intron | 55.0% |
| GTGGCCTAAATTGCGGCCTT+TGG | - | chr8_3:13152367-13152386 | None:intergenic | 55.0% | |
| AGGCCGCAATTTAGGCCACT+AGG | + | chr8_3:13152368-13152387 | Msa1277530:intron | 55.0% | |
| GGCCGCAATTTAGGCCACTA+GGG | + | chr8_3:13152369-13152388 | Msa1277530:intron | 55.0% | |
| GCCGCAATTTAGGCCACTAG+GGG | + | chr8_3:13152370-13152389 | Msa1277530:intron | 55.0% | |
| CCCCCTAGTGGCCTAAATTG+CGG | - | chr8_3:13152374-13152393 | None:intergenic | 55.0% | |
| CCGCAATTTAGGCCACTAGG+GGG | + | chr8_3:13152371-13152390 | Msa1277530:intron | 55.0% | |
| CGCAATTTAGGCCACTAGGG+GGG | + | chr8_3:13152372-13152391 | Msa1277530:intron | 55.0% | |
| TTTATTGTGGGCCCCCCTAG+TGG | - | chr8_3:13152386-13152405 | None:intergenic | 55.0% | |
| ACTAGGGGGGCCCACAATAA+AGG | + | chr8_3:13152385-13152404 | Msa1277530:intron | 55.0% | |
| CAGTAGCTGCTAGATCTGGC+TGG | - | chr8_3:13152868-13152887 | None:intergenic | 55.0% | |
| GTAGTTGTGCCTGTTGAGGC+TGG | + | chr8_3:13152887-13152906 | Msa1277530:intron | 55.0% | |
| GATTTGAACCCGGGAGAACC+GGG | - | chr8_3:13153132-13153151 | None:intergenic | 55.0% | |
| GGATTTGAACCCGGGAGAAC+CGG | - | chr8_3:13153133-13153152 | None:intergenic | 55.0% | |
| GTTCTCCCGGGTTCAAATCC+CGG | + | chr8_3:13153133-13153152 | Msa1277530:intron | 55.0% | |
| GGTCGCAGTGGATCCTGAAT+TGG | - | chr8_3:13153420-13153439 | None:intergenic | 55.0% | |
| GCTCCTGGAATGACTGATCC+CGG | + | chr8_3:13153533-13153552 | Msa1277530:CDS | 55.0% | |
| CACCATCCAGACAACCCAAG+TGG | - | chr8_3:13153833-13153852 | None:intergenic | 55.0% | |
| !! | ATGGTGTTGGCTTGGGACCT+TGG | + | chr8_3:13153847-13153866 | Msa1277530:intron | 55.0% |
| !! | TGGTGTTGGCTTGGGACCTT+GGG | + | chr8_3:13153848-13153867 | Msa1277530:intron | 55.0% |
| TGTGCTCCTCTCAAGGTCTC+AGG | + | chr8_3:13153872-13153891 | Msa1277530:intron | 55.0% | |
| CCCATCTGTGCCAATTTCGG+TGG | + | chr8_3:13153902-13153921 | Msa1277530:intron | 55.0% | |
| CCCACCGAAATTGGCACAGA+TGG | - | chr8_3:13153906-13153925 | None:intergenic | 55.0% | |
| ATATCCATGCCCACCCTCGA+CGG | - | chr8_3:13154069-13154088 | None:intergenic | 55.0% | |
| ! | GCTTGTTGAGACGGACGTTG+AGG | - | chr8_3:13154294-13154313 | None:intergenic | 55.0% |
| CGTCCGTCTCAACAAGCTTG+TGG | + | chr8_3:13154297-13154316 | Msa1277530:CDS | 55.0% | |
| GTCCCCTGCGAAACCGAAAT+TGG | + | chr8_3:13154319-13154338 | Msa1277530:CDS | 55.0% | |
| GGCCAATTTCGGTTTCGCAG+GGG | - | chr8_3:13154324-13154343 | None:intergenic | 55.0% | |
| CAGGCCAATTTCGGTTTCGC+AGG | - | chr8_3:13154326-13154345 | None:intergenic | 55.0% | |
| GCATGCATCTCCACACATGG+AGG | + | chr8_3:13154350-13154369 | Msa1277530:CDS | 55.0% | |
| !! | AGCGGCGTCGTTTTCGGAGA+AGG | - | chr8_3:13147888-13147907 | None:intergenic | 60.0% |
| TCAGATGCTATGGCGCCGCT+TGG | + | chr8_3:13148132-13148151 | Msa1277530:CDS | 60.0% | |
| GTCAAAGCGGAAATGCGGCG+CGG | + | chr8_3:13148725-13148744 | Msa1277530:intron | 60.0% | |
| ! | GCCCGCGTCGCGTCAATTTT+TGG | - | chr8_3:13148761-13148780 | None:intergenic | 60.0% |
| GGGTCAACGCGGGCAAAAAG+CGG | - | chr8_3:13149123-13149142 | None:intergenic | 60.0% | |
| GGCAAAAAGCGGGTCAACGC+GGG | - | chr8_3:13149133-13149152 | None:intergenic | 60.0% | |
| GGGCAAAAAGCGGGTCAACG+CGG | - | chr8_3:13149134-13149153 | None:intergenic | 60.0% | |
| GGTCAACGCGGGCAAAAAGC+GGG | - | chr8_3:13149122-13149141 | None:intergenic | 60.0% | |
| GGGTCAACGCGGGCAAAAAG+CGG | - | chr8_3:13149123-13149142 | None:intergenic | 60.0% | |
| AACAACGCCGAGAACCAGGC+TGG | - | chr8_3:13150847-13150866 | None:intergenic | 60.0% | |
| CGGGCTGCTGTTCAGAGATG+CGG | + | chr8_3:13151174-13151193 | Msa1277530:CDS | 60.0% | |
| TGCCACGAGGGATCCAGAGA+AGG | + | chr8_3:13151972-13151991 | Msa1277530:intron | 60.0% | |
| GCCACGAGGGATCCAGAGAA+GGG | + | chr8_3:13151973-13151992 | Msa1277530:intron | 60.0% | |
| CCACGAGGGATCCAGAGAAG+GGG | + | chr8_3:13151974-13151993 | Msa1277530:intron | 60.0% | |
| !! | TCGTGTTGGCTTTGAGGGGG+TGG | - | chr8_3:13152313-13152332 | None:intergenic | 60.0% |
| AGGGGGGCCCACAATAAAGG+CGG | + | chr8_3:13152388-13152407 | Msa1277530:intron | 60.0% | |
| TGGGTATCACCCGGTTCTCC+CGG | + | chr8_3:13153120-13153139 | Msa1277530:intron | 60.0% | |
| CGTTGCCGGGATTTGAACCC+GGG | - | chr8_3:13153141-13153160 | None:intergenic | 60.0% | |
| CCGTTGCCGGGATTTGAACC+CGG | - | chr8_3:13153142-13153161 | None:intergenic | 60.0% | |
| CCGGGTTCAAATCCCGGCAA+CGG | + | chr8_3:13153139-13153158 | Msa1277530:intron | 60.0% | |
| GGTTGTCACAGTGGTCGCAG+TGG | - | chr8_3:13153432-13153451 | None:intergenic | 60.0% | |
| ! | GCCCACTTGGGTTGTCTGGA+TGG | + | chr8_3:13153828-13153847 | Msa1277530:intron | 60.0% |
| !! | GGTGTTGGCTTGGGACCTTG+GGG | + | chr8_3:13153849-13153868 | Msa1277530:intron | 60.0% |
| ! | CTTGAGAGGAGCACACCCCA+AGG | - | chr8_3:13153867-13153886 | None:intergenic | 60.0% |
| CTTGGGGTGTGCTCCTCTCA+AGG | + | chr8_3:13153865-13153884 | Msa1277530:intron | 60.0% | |
| GGAACCCACAAGTGGACGGT+GGG | + | chr8_3:13153953-13153972 | Msa1277530:intron | 60.0% | |
| CCATCCCACCGTCCACTTGT+GGG | - | chr8_3:13153960-13153979 | None:intergenic | 60.0% | |
| CCACAAGTGGACGGTGGGAT+GGG | + | chr8_3:13153958-13153977 | Msa1277530:intron | 60.0% | |
| GACGGTGGGATGGGATCTCA+AGG | + | chr8_3:13153967-13153986 | Msa1277530:intron | 60.0% | |
| TATCCATGCCCACCCTCGAC+GGG | - | chr8_3:13154068-13154087 | None:intergenic | 60.0% | |
| CTATGGCGCCGCTTGGCGTA+TGG | + | chr8_3:13148139-13148158 | Msa1277530:CDS | 65.0% | |
| ACGCGACCGAGTCGTGCGTT+AGG | - | chr8_3:13149185-13149204 | None:intergenic | 65.0% | |
| CCCCTTCTCTGGATCCCTCG+TGG | - | chr8_3:13151977-13151996 | None:intergenic | 65.0% | |
| GGGTATCACCCGGTTCTCCC+GGG | + | chr8_3:13153121-13153140 | Msa1277530:intron | 65.0% | |
| ATGGGCAAGGGGAGCCCACT+TGG | + | chr8_3:13153815-13153834 | Msa1277530:intron | 65.0% | |
| TGGGCAAGGGGAGCCCACTT+GGG | + | chr8_3:13153816-13153835 | Msa1277530:intron | 65.0% | |
| ! | GGGAGCCCACTTGGGTTGTC+TGG | + | chr8_3:13153824-13153843 | Msa1277530:intron | 65.0% |
| GGGAACCCACAAGTGGACGG+TGG | + | chr8_3:13153952-13153971 | Msa1277530:intron | 65.0% | |
| CCCACAAGTGGACGGTGGGA+TGG | + | chr8_3:13153957-13153976 | Msa1277530:intron | 65.0% | |
| CCCATCCCACCGTCCACTTG+TGG | - | chr8_3:13153961-13153980 | None:intergenic | 65.0% | |
| AGGAAACCCTACCCCCGTCG+AGG | + | chr8_3:13154052-13154071 | Msa1277530:intron | 65.0% | |
| GGAAACCCTACCCCCGTCGA+GGG | + | chr8_3:13154053-13154072 | Msa1277530:intron | 65.0% | |
| ATCCATGCCCACCCTCGACG+GGG | - | chr8_3:13154067-13154086 | None:intergenic | 65.0% | |
| CGGTCGCGTTCTGACGCGCT+AGG | + | chr8_3:13149196-13149215 | Msa1277530:intron | 70.0% | |
| GGTCTAACGCGGCGCGATCG+CGG | - | chr8_3:13149242-13149261 | None:intergenic | 70.0% | |
| ATATGGGCGAGGGGCAGGGC+AGG | + | chr8_3:13154032-13154051 | Msa1277530:intron | 70.0% | |
| AACCCTACCCCCGTCGAGGG+TGG | + | chr8_3:13154056-13154075 | Msa1277530:intron | 70.0% | |
| ACCCTACCCCCGTCGAGGGT+GGG | + | chr8_3:13154057-13154076 | Msa1277530:intron | 70.0% | |
| TCCATGCCCACCCTCGACGG+GGG | - | chr8_3:13154066-13154085 | None:intergenic | 70.0% | |
| AGCGGAAATGCGGCGCGGCG+CGG | + | chr8_3:13148730-13148749 | Msa1277530:intron | 75.0% | |
| GCCCACCCTCGACGGGGGTA+GGG | - | chr8_3:13154061-13154080 | None:intergenic | 75.0% | |
| TGCCCACCCTCGACGGGGGT+AGG | - | chr8_3:13154062-13154081 | None:intergenic | 75.0% | |
| ACCCCCGTCGAGGGTGGGCA+TGG | + | chr8_3:13154062-13154081 | Msa1277530:intron | 75.0% | |
| ! | AACGCGGCGCGATCGCGGCG+CGG | - | chr8_3:13149237-13149256 | None:intergenic | 80.0% |
| ! | GGCGCGATCGCGGCGCGGAG+CGG | - | chr8_3:13149232-13149251 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 13147804 | 13154725 | 13147804 | ID=Msa1277530;Name=Msa1277530 |
| chr8_3 | mRNA | 13147804 | 13154725 | 13147804 | ID=Msa1277530-mRNA-1;Parent=Msa1277530;Name=Msa1277530-mRNA-1;_AED=0.09;_eAED=0.09;_QI=53|0.57|0.5|1|0.57|0.75|8|342|336 |
| chr8_3 | exon | 13147804 | 13147921 | 13147804 | ID=Msa1277530-mRNA-1:exon:5174;Parent=Msa1277530-mRNA-1 |
| chr8_3 | exon | 13148012 | 13148109 | 13148012 | ID=Msa1277530-mRNA-1:exon:5175;Parent=Msa1277530-mRNA-1 |
| chr8_3 | exon | 13148126 | 13148160 | 13148126 | ID=Msa1277530-mRNA-1:exon:5176;Parent=Msa1277530-mRNA-1 |
| chr8_3 | exon | 13150303 | 13150389 | 13150303 | ID=Msa1277530-mRNA-1:exon:5177;Parent=Msa1277530-mRNA-1 |
| chr8_3 | exon | 13150877 | 13151035 | 13150877 | ID=Msa1277530-mRNA-1:exon:5178;Parent=Msa1277530-mRNA-1 |
| chr8_3 | exon | 13151048 | 13151269 | 13151048 | ID=Msa1277530-mRNA-1:exon:5179;Parent=Msa1277530-mRNA-1 |
| chr8_3 | exon | 13153383 | 13153554 | 13153383 | ID=Msa1277530-mRNA-1:exon:5180;Parent=Msa1277530-mRNA-1 |
| chr8_3 | exon | 13154211 | 13154725 | 13154211 | ID=Msa1277530-mRNA-1:exon:5181;Parent=Msa1277530-mRNA-1 |
| chr8_3 | five_prime_UTR | 13147804 | 13147856 | 13147804 | ID=Msa1277530-mRNA-1:five_prime_utr;Parent=Msa1277530-mRNA-1 |
| chr8_3 | CDS | 13147857 | 13147921 | 13147857 | ID=Msa1277530-mRNA-1:cds;Parent=Msa1277530-mRNA-1 |
| chr8_3 | CDS | 13148012 | 13148109 | 13148012 | ID=Msa1277530-mRNA-1:cds;Parent=Msa1277530-mRNA-1 |
| chr8_3 | CDS | 13148126 | 13148160 | 13148126 | ID=Msa1277530-mRNA-1:cds;Parent=Msa1277530-mRNA-1 |
| chr8_3 | CDS | 13150303 | 13150389 | 13150303 | ID=Msa1277530-mRNA-1:cds;Parent=Msa1277530-mRNA-1 |
| chr8_3 | CDS | 13150877 | 13151035 | 13150877 | ID=Msa1277530-mRNA-1:cds;Parent=Msa1277530-mRNA-1 |
| chr8_3 | CDS | 13151048 | 13151269 | 13151048 | ID=Msa1277530-mRNA-1:cds;Parent=Msa1277530-mRNA-1 |
| chr8_3 | CDS | 13153383 | 13153554 | 13153383 | ID=Msa1277530-mRNA-1:cds;Parent=Msa1277530-mRNA-1 |
| chr8_3 | CDS | 13154211 | 13154383 | 13154211 | ID=Msa1277530-mRNA-1:cds;Parent=Msa1277530-mRNA-1 |
| chr8_3 | three_prime_UTR | 13154384 | 13154725 | 13154384 | ID=Msa1277530-mRNA-1:three_prime_utr;Parent=Msa1277530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
