AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1280850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 33 sgRNAs with CRISPR-Local

Find 634 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACAAGGAAGGTTGAATTT+TGG 0.224327 8_3:+19783889 Msa1280850:CDS
CCATCAACATGGGCTTTATT+AGG 0.231407 8_3:+19778347 Msa1280850:CDS
AAAACTACTTGAAGCCTTGC+AGG 0.303394 8_3:-19775752 None:intergenic
CCTAATAAAGCCCATGTTGA+TGG 0.349390 8_3:-19778347 None:intergenic
GAAGATGGACAAGCAATCTT+TGG 0.379321 8_3:-19783912 None:intergenic
GTAAAGAATGGAGACATAAA+TGG 0.387451 8_3:+19775422 Msa1280850:CDS
AGACATAAATGGTGAAGAAT+TGG 0.403089 8_3:+19775433 Msa1280850:CDS
TTTGTTGCTTGATCCGGCTT+TGG 0.403666 8_3:-19785922 Msa1280860:intron
CCTCTCTATTACATACTAAT+CGG 0.415549 8_3:-19775667 None:intergenic
AGGGCGTGAGCGAAAAGTGC+AGG 0.464525 8_3:+19778299 Msa1280850:intron
GCCAAACACACCATTACTAC+TGG 0.515006 8_3:-19775456 None:intergenic
ATGGAGAATGCATCTGAAGA+TGG 0.525918 8_3:-19783927 None:intergenic
GGACACTTAGTTTGAGTGAC+CGG 0.528480 8_3:-19775731 None:intergenic
AAAACTGAGTATGCATATGC+AGG 0.531258 8_3:+19785728 Msa1280850:CDS
GACATCTATGCAGAATGTCA+TGG 0.542858 8_3:+19775587 Msa1280850:intron
ATAAACGATCTAGATATTCG+AGG 0.561401 8_3:+19775708 Msa1280850:CDS
ACATCTATGCAGAATGTCAT+GGG 0.564077 8_3:+19775588 Msa1280850:intron
CCGATTAGTATGTAATAGAG+AGG 0.588561 8_3:+19775667 Msa1280850:CDS
CTTAAGTACATCAACAAGGA+AGG 0.589387 8_3:+19783878 Msa1280850:CDS
TACGAAAAGAGTTCCAAAGC+CGG 0.596943 8_3:+19785909 Msa1280850:CDS
GGGCGTGAGCGAAAAGTGCA+GGG 0.597797 8_3:+19778300 Msa1280850:intron
GAAGAATTGGCCAGTAGTAA+TGG 0.603030 8_3:+19775446 Msa1280850:CDS
GATGTCAACAAAGATTCTGA+TGG 0.606309 8_3:+19775629 Msa1280850:CDS
TCGTGTGAAAGCCATCAACA+TGG 0.609265 8_3:+19778336 Msa1280850:CDS
ACGATCTAGATATTCGAGGC+CGG 0.638316 8_3:+19775712 Msa1280850:CDS
CGTGTGAAAGCCATCAACAT+GGG 0.641755 8_3:+19778337 Msa1280850:CDS
CGATTAGTATGTAATAGAGA+GGG 0.642038 8_3:+19775668 Msa1280850:CDS
CTCAAACTAAGTGTCCTGCA+AGG 0.646263 8_3:+19775738 Msa1280850:CDS
CTATAGGATTCAACAACCAA+AGG 0.657329 8_3:+19785816 Msa1280850:intron
TAGGATTCAACAACCAAAGG+AGG 0.661392 8_3:+19785819 Msa1280850:intron
AAGCAGCAACAAGAGACTGA+AGG 0.671893 8_3:+19785860 Msa1280850:CDS
AATACTTAAGTACATCAACA+AGG 0.728397 8_3:+19783874 Msa1280850:CDS
CGTGAGCGAAAAGTGCAGGG+CGG 0.767095 8_3:+19778303 Msa1280850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAAAAAAATAATAA+TGG + chr8_3:19782227-19782246 Msa1280850:intron 0.0%
!!! TCTAAATTTGTTAAAATTAT+GGG - chr8_3:19777901-19777920 None:intergenic 10.0%
!!! ATCTAAATTTGTTAAAATTA+TGG - chr8_3:19777902-19777921 None:intergenic 10.0%
!! ATTATGTTAATAATGTTATT+TGG - chr8_3:19778854-19778873 None:intergenic 10.0%
!!! TACAATTTTTAGAAATTATA+TGG + chr8_3:19779761-19779780 Msa1280850:intron 10.0%
!! TAAAACCTAAAATAAATATA+AGG + chr8_3:19780979-19780998 Msa1280850:intron 10.0%
!! GAATAAAAAAAAAAAAAAAG+TGG + chr8_3:19781341-19781360 Msa1280850:intron 10.0%
!! AAAAAAAAAAAAAACTTTAG+AGG + chr8_3:19782387-19782406 Msa1280850:intron 10.0%
!! ATTATTTAGATGAAAATTAT+AGG - chr8_3:19782602-19782621 None:intergenic 10.0%
!!! TATAATTTTCATCTAAATAA+TGG + chr8_3:19782601-19782620 Msa1280850:intron 10.0%
!!! GTAACAAATTAATTTTATAT+AGG - chr8_3:19783433-19783452 None:intergenic 10.0%
!!! TAATTTTTTTGTTTAATAGA+AGG - chr8_3:19784950-19784969 Msa1280860:three_prime_UTR 10.0%
!! CTATTAAACAAAAAAATTAA+AGG + chr8_3:19784951-19784970 Msa1280850:intron 10.0%
!!! TTTTTTTATTAAAATTTCAG+AGG + chr8_3:19785194-19785213 Msa1280850:intron 10.0%
!!! TTTTTTATTAAAATTTCAGA+GGG + chr8_3:19785195-19785214 Msa1280850:intron 10.0%
!!! TGAAGAAATTACAAAATTTT+TGG + chr8_3:19776441-19776460 Msa1280850:intron 15.0%
!!! TTTTATATCATATGTTTTGT+AGG - chr8_3:19776801-19776820 None:intergenic 15.0%
!!! ATTTTATATCATATGTTTTG+TGG + chr8_3:19776800-19776819 Msa1280850:intron 15.0%
!!! TTTTATATCATATGTTTTGT+GGG + chr8_3:19776801-19776820 Msa1280850:intron 15.0%
!!! GCATCTTTTTTTTTTTTTTT+GGG - chr8_3:19777062-19777081 None:intergenic 15.0%
!!! AGCATCTTTTTTTTTTTTTT+TGG - chr8_3:19777063-19777082 None:intergenic 15.0%
!!! CTGGATTATTTTTTATTTTA+CGG - chr8_3:19777749-19777768 None:intergenic 15.0%
!! TGTTAAAAATTTAGATAACA+TGG - chr8_3:19777835-19777854 None:intergenic 15.0%
!!! CTCAATTTTAATTTCAATTT+CGG + chr8_3:19777945-19777964 Msa1280850:intron 15.0%
!!! GTAATTTTAAATGTTGATAT+AGG - chr8_3:19778469-19778488 None:intergenic 15.0%
!! GTGAGATTAAAAATAATAAA+TGG - chr8_3:19778542-19778561 None:intergenic 15.0%
!! AGATATAATCCAAATATAAT+TGG + chr8_3:19778882-19778901 Msa1280850:intron 15.0%
!!! TATTTGTTAGTAATGATATT+TGG - chr8_3:19778924-19778943 None:intergenic 15.0%
!!! AATTATAGTTTTGAATGAAT+AGG - chr8_3:19778952-19778971 None:intergenic 15.0%
!! ATAATTAAAGTTAATAACTC+AGG - chr8_3:19779010-19779029 None:intergenic 15.0%
!! AAATTCATACCTTATAATAA+AGG - chr8_3:19779058-19779077 None:intergenic 15.0%
!!! ATTAAAGTTGTTTTAACATT+AGG - chr8_3:19779103-19779122 None:intergenic 15.0%
!!! TTTAATTTCATCAAAGATAT+AGG + chr8_3:19779117-19779136 Msa1280850:intron 15.0%
!! TCATATAATTTCAAAACATA+AGG + chr8_3:19779253-19779272 Msa1280850:intron 15.0%
!!! GATTTTTTTTTCTTTCTTTT+GGG - chr8_3:19779343-19779362 None:intergenic 15.0%
!!! TGATTTTTTTTTCTTTCTTT+TGG - chr8_3:19779344-19779363 None:intergenic 15.0%
!! TTTGTTACATAAATCAAAAT+TGG + chr8_3:19779382-19779401 Msa1280850:intron 15.0%
!! TTGTTACATAAATCAAAATT+GGG + chr8_3:19779383-19779402 Msa1280850:intron 15.0%
!!! TTTGTCCTTATATTTATTTT+AGG - chr8_3:19780987-19781006 None:intergenic 15.0%
!!! AGATTTTATGTTTTTAGTTT+TGG - chr8_3:19781281-19781300 None:intergenic 15.0%
!!! TTTTATTCTTTCTTTCTTAT+GGG - chr8_3:19781329-19781348 None:intergenic 15.0%
!!! TTTTTATTCTTTCTTTCTTA+TGG - chr8_3:19781330-19781349 None:intergenic 15.0%
!!! AAAGGTATGAAATTTTATTT+TGG - chr8_3:19781835-19781854 None:intergenic 15.0%
!! CAAATACTATTTAATAAACA+TGG + chr8_3:19782069-19782088 Msa1280850:intron 15.0%
!!! ATTTTTCTTTTACTTTTTGA+TGG - chr8_3:19782211-19782230 None:intergenic 15.0%
!!! TAAAATATATATTTGGAGTT+TGG - chr8_3:19782477-19782496 None:intergenic 15.0%
!! AAAAAATATATATCAGGTAA+GGG - chr8_3:19782638-19782657 None:intergenic 15.0%
!! AAAAAAATATATATCAGGTA+AGG - chr8_3:19782639-19782658 None:intergenic 15.0%
!!! TTTATTTTAAGTAATCCATT+TGG - chr8_3:19783325-19783344 None:intergenic 15.0%
!! AACTAATTAACTAAAAATAG+AGG + chr8_3:19783373-19783392 Msa1280850:intron 15.0%
!! ACTAATTAACTAAAAATAGA+GGG + chr8_3:19783374-19783393 Msa1280850:intron 15.0%
!! TAAAAAATTCAATTATAGTG+TGG + chr8_3:19783477-19783496 Msa1280850:intron 15.0%
!! AAAAAATTAAAGGTTTAACT+CGG + chr8_3:19784961-19784980 Msa1280850:intron 15.0%
!!! GGTTTATATGATATTTTAAT+GGG + chr8_3:19785216-19785235 Msa1280850:intron 15.0%
!!! ATCAAATGAACATAATTTGT+CGG - chr8_3:19775842-19775861 None:intergenic 20.0%
!! CATTGTTTAAGTAGTTATAT+AGG - chr8_3:19776191-19776210 None:intergenic 20.0%
!! TATAACTACTTAAACAATGA+AGG + chr8_3:19776192-19776211 Msa1280850:intron 20.0%
!!! GACATTTAGAAAATCTATTT+TGG + chr8_3:19776300-19776319 Msa1280850:intron 20.0%
!! CACTCAGAAAAAATAATAAT+AGG - chr8_3:19776412-19776431 None:intergenic 20.0%
!! CATATGATATAAAATTTAGC+CGG + chr8_3:19776623-19776642 Msa1280850:intron 20.0%
!! ATATATAATTGAGACAACTT+TGG - chr8_3:19776692-19776711 None:intergenic 20.0%
!! ATATATAAATGAGACAACTT+TGG + chr8_3:19776726-19776745 Msa1280850:intron 20.0%
!! TGGAACTTAATAAAAATGAT+TGG - chr8_3:19776832-19776851 None:intergenic 20.0%
!! ATGTATCATAAATGGTATAA+AGG - chr8_3:19776942-19776961 None:intergenic 20.0%
!! AAATTGTAATTTCTCAAAGA+TGG + chr8_3:19777031-19777050 Msa1280850:intron 20.0%
!! GTGAACTTAAAAAAAAACAT+TGG + chr8_3:19777203-19777222 Msa1280850:intron 20.0%
!!! AATTGAATCTGAAATTAACA+TGG - chr8_3:19778010-19778029 None:intergenic 20.0%
!! TGGATTCTATAAATTGTAAT+GGG + chr8_3:19778038-19778057 Msa1280850:intron 20.0%
!! TAAGAATCAAATGAACAAAA+TGG + chr8_3:19778389-19778408 Msa1280850:intron 20.0%
!! CAATTAGTATGTAATAAAGA+GGG - chr8_3:19778564-19778583 None:intergenic 20.0%
!! TCAATTAGTATGTAATAAAG+AGG - chr8_3:19778565-19778584 None:intergenic 20.0%
!! TTGTGATAAATAACCTTAAA+TGG - chr8_3:19778804-19778823 None:intergenic 20.0%
!! ATGTAAAGTCCTTTATTATA+AGG + chr8_3:19779046-19779065 Msa1280850:intron 20.0%
!!! AAAGCACTATTCAAAAAAAT+TGG + chr8_3:19779162-19779181 Msa1280850:intron 20.0%
!!! TTTTAAGTAATTGAACTTGT+TGG - chr8_3:19779200-19779219 None:intergenic 20.0%
!! TGAAATTATATGATGTTTAC+TGG - chr8_3:19779246-19779265 None:intergenic 20.0%
!!! ATACTATAGAGCAATTTTTT+GGG + chr8_3:19779283-19779302 Msa1280850:intron 20.0%
!! ATATGGAAACAATTAAAGAT+AGG + chr8_3:19779778-19779797 Msa1280850:intron 20.0%
!! GAAACCTAAAATAAACATAT+GGG - chr8_3:19779822-19779841 None:intergenic 20.0%
!! TGAAACCTAAAATAAACATA+TGG - chr8_3:19779823-19779842 None:intergenic 20.0%
!!! GTTAAAACTTTTAAACCATA+AGG - chr8_3:19779874-19779893 None:intergenic 20.0%
!!! ATGGTTTAAAAGTTTTAACT+TGG + chr8_3:19779875-19779894 Msa1280850:intron 20.0%
!! AGAGATATATGTTGAAAATA+TGG + chr8_3:19779952-19779971 Msa1280850:intron 20.0%
!! GAGATATATGTTGAAAATAT+GGG + chr8_3:19779953-19779972 Msa1280850:intron 20.0%
!! TATTAAACTCCAAATTAGAA+CGG + chr8_3:19780037-19780056 Msa1280850:intron 20.0%
!! TGCTTATAATTATTTAACAG+TGG + chr8_3:19780214-19780233 Msa1280850:intron 20.0%
!! ACTTAAAAAACAAGAAACTT+AGG - chr8_3:19780365-19780384 None:intergenic 20.0%
!!! TTTTACCATTATTTGGATTT+CGG + chr8_3:19780518-19780537 Msa1280850:intron 20.0%
!!! TTTCGGTTTTATTTGTTATA+TGG + chr8_3:19780535-19780554 Msa1280850:intron 20.0%
!!! TGTTATTTTAGTTCTTTATC+CGG + chr8_3:19780718-19780737 Msa1280850:intron 20.0%
!!! ATATGGAGTTTAGTTTTTTT+TGG - chr8_3:19780857-19780876 None:intergenic 20.0%
!! TTAATAAGGTGATATCTTTA+AGG - chr8_3:19781023-19781042 None:intergenic 20.0%
!!! GTCATTGATAATGTTTAATA+AGG - chr8_3:19781037-19781056 None:intergenic 20.0%
!! ATTAAACATTATCAATGACA+TGG + chr8_3:19781038-19781057 Msa1280850:intron 20.0%
!! ATATTTCAGTAGTTAAACAA+AGG + chr8_3:19781228-19781247 Msa1280850:intron 20.0%
!! TATTTCAGTAGTTAAACAAA+GGG + chr8_3:19781229-19781248 Msa1280850:intron 20.0%
!! TTTATTCTTTCTTTCTTATG+GGG - chr8_3:19781328-19781347 None:intergenic 20.0%
!! AAATGAAAGAAATTCAATGA+TGG - chr8_3:19781502-19781521 None:intergenic 20.0%
!! TTAATAACTGTTCTACATAA+GGG - chr8_3:19781552-19781571 None:intergenic 20.0%
!! ATTAATAACTGTTCTACATA+AGG - chr8_3:19781553-19781572 None:intergenic 20.0%
!! CTTATTATCATATTACATTC+AGG - chr8_3:19781586-19781605 None:intergenic 20.0%
!! ATCTATAAATAATAGTCAGA+AGG - chr8_3:19781657-19781676 None:intergenic 20.0%
!! TATTAAATAGTATTTGCTCA+GGG - chr8_3:19782065-19782084 None:intergenic 20.0%
!! TTATTAAATAGTATTTGCTC+AGG - chr8_3:19782066-19782085 None:intergenic 20.0%
!! ACTATTTAATAAACATGGTT+TGG + chr8_3:19782074-19782093 Msa1280850:intron 20.0%
!! CATGTACATTGTAAAAATAA+TGG - chr8_3:19782141-19782160 None:intergenic 20.0%
!!! AAAAAAACTTTAGAGGAATT+AGG + chr8_3:19782394-19782413 Msa1280850:intron 20.0%
!!! TTAATTTTTCCTTAGTATCT+AGG - chr8_3:19782842-19782861 None:intergenic 20.0%
!! AAAGATAATCTAGTTAAAAG+AGG + chr8_3:19783527-19783546 Msa1280850:intron 20.0%
!! AAGAAATAAAATTGTTGACA+TGG + chr8_3:19783770-19783789 Msa1280850:intron 20.0%
!! ATAAACGAAATTAGATCATT+TGG + chr8_3:19783834-19783853 Msa1280850:intron 20.0%
!! ATTTGGACCTAAAAAAAAAT+CGG - chr8_3:19784164-19784183 None:intergenic 20.0%
!! TCTTATTATTCAAATGGATA+TGG - chr8_3:19784217-19784236 None:intergenic 20.0%
!! TCATAAGCTTATATAGATAT+AGG - chr8_3:19784405-19784424 None:intergenic 20.0%
!!! TATGTATATTGTTTTGTCTT+TGG - chr8_3:19784698-19784717 None:intergenic 20.0%
!!! AATATGCTAAATATCTCTTT+TGG - chr8_3:19785009-19785028 Msa1280860:three_prime_UTR 20.0%
!!! TGTTCATTCTCATTTTATAA+TGG + chr8_3:19785155-19785174 Msa1280850:intron 20.0%
!!! TTCTCATTTTATAATGGTTT+TGG + chr8_3:19785161-19785180 Msa1280850:intron 20.0%
!!! GGGTTTATATGATATTTTAA+TGG + chr8_3:19785215-19785234 Msa1280850:intron 20.0%
!!! TGATATTTTAATGGGAAATT+CGG + chr8_3:19785224-19785243 Msa1280850:intron 20.0%
!! AAAAAAGTCTTTGACAATAT+CGG - chr8_3:19785451-19785470 Msa1280860:three_prime_UTR 20.0%
!!! TATAGCATTTTACTTACAAA+TGG - chr8_3:19785493-19785512 Msa1280860:three_prime_UTR 20.0%
! AAAATATGGTCATTAAGGTA+TGG + chr8_3:19776149-19776168 Msa1280850:intron 25.0%
! AAATATGGTCATTAAGGTAT+GGG + chr8_3:19776150-19776169 Msa1280850:intron 25.0%
!! TTAAGGTATGGGTTTTTAAA+AGG + chr8_3:19776161-19776180 Msa1280850:intron 25.0%
!!! TAAGGTATGGGTTTTTAAAA+GGG + chr8_3:19776162-19776181 Msa1280850:intron 25.0%
! TTGCATTTAACACAACTTAT+AGG + chr8_3:19776368-19776387 Msa1280850:intron 25.0%
!! ATTTTGTAATTTCTTCACGA+TGG - chr8_3:19776438-19776457 None:intergenic 25.0%
! TTAAAACTCATTGTATGTCT+CGG - chr8_3:19776490-19776509 None:intergenic 25.0%
! GGTAAACAAACAAACAAATA+AGG - chr8_3:19776875-19776894 None:intergenic 25.0%
! TAGAAGCAATGTATCATAAA+TGG - chr8_3:19776950-19776969 None:intergenic 25.0%
!! TAAATGTCATTTGTTTGTTG+TGG + chr8_3:19777181-19777200 Msa1280850:intron 25.0%
! ATAACTACTTAAACAAGGAA+GGG - chr8_3:19777295-19777314 None:intergenic 25.0%
! TATAACTACTTAAACAAGGA+AGG - chr8_3:19777296-19777315 None:intergenic 25.0%
! CCTATATAACTACTTAAACA+AGG - chr8_3:19776188-19776207 None:intergenic 25.0%
!! CCTTGTTTAAGTAGTTATAT+AGG + chr8_3:19777297-19777316 Msa1280850:intron 25.0%
!! GTTAGAATATGTCAAGTTTT+GGG - chr8_3:19777375-19777394 None:intergenic 25.0%
!! TGTTAGAATATGTCAAGTTT+TGG - chr8_3:19777376-19777395 None:intergenic 25.0%
! AGAAGATAAAGAAGATATGA+GGG - chr8_3:19777701-19777720 None:intergenic 25.0%
! AAGAAGATAAAGAAGATATG+AGG - chr8_3:19777702-19777721 None:intergenic 25.0%
!!! ATTCCATTTTGAAAACATGA+GGG + chr8_3:19777968-19777987 Msa1280850:intron 25.0%
! TCAGATTCAATTTCAATTTC+TGG + chr8_3:19778018-19778037 Msa1280850:intron 25.0%
! CTGGATTCTATAAATTGTAA+TGG + chr8_3:19778037-19778056 Msa1280850:intron 25.0%
! ATCAAATGAACAAAATGGAT+CGG + chr8_3:19778394-19778413 Msa1280850:intron 25.0%
! AAATGTTGATATAGGTTAGT+GGG - chr8_3:19778461-19778480 None:intergenic 25.0%
! TAAATGTTGATATAGGTTAG+TGG - chr8_3:19778462-19778481 None:intergenic 25.0%
! ATATAAACACAGATTCTGAT+GGG - chr8_3:19778602-19778621 None:intergenic 25.0%
! CAAGAAGAATAGGAAATTTA+CGG - chr8_3:19778724-19778743 None:intergenic 25.0%
! ATAATAAAGGACTTTACATG+TGG - chr8_3:19779045-19779064 None:intergenic 25.0%
!! TAGTGCTTTAAATACTTTGT+TGG - chr8_3:19779151-19779170 None:intergenic 25.0%
!!! CATACTATAGAGCAATTTTT+TGG + chr8_3:19779282-19779301 Msa1280850:intron 25.0%
!! CGATGTTAATGTTTGTTAAT+GGG - chr8_3:19779429-19779448 None:intergenic 25.0%
! CCATTAACAAACATTAACAT+CGG + chr8_3:19779427-19779446 Msa1280850:intron 25.0%
!!! TAGTCCCATATGTTTATTTT+AGG + chr8_3:19779815-19779834 Msa1280850:intron 25.0%
!!! GTTTATTTTAGGTTTCAAGT+TGG + chr8_3:19779826-19779845 Msa1280850:intron 25.0%
! ATTAAACTCCAAATTAGAAC+GGG + chr8_3:19780038-19780057 Msa1280850:intron 25.0%
!!! AGGTTTTGATCATTTTTTTG+TGG + chr8_3:19780256-19780275 Msa1280850:intron 25.0%
! ACAAATATATTCACCTTCAA+CGG - chr8_3:19780294-19780313 None:intergenic 25.0%
!!! AGGTGAATATATTTGTTTTG+TGG + chr8_3:19780298-19780317 Msa1280850:intron 25.0%
!!! ATATTTGTTTTGTGGATCAA+AGG + chr8_3:19780306-19780325 Msa1280850:intron 25.0%
!!! TTTTTTAAGTGAGACTACTA+CGG + chr8_3:19780375-19780394 Msa1280850:intron 25.0%
!!! TCTCATTCAAAATAGTTTTG+TGG + chr8_3:19780462-19780481 Msa1280850:intron 25.0%
! TAAAACCGAAATCCAAATAA+TGG - chr8_3:19780526-19780545 None:intergenic 25.0%
! AAACTAAACTCCATATTATG+TGG + chr8_3:19780861-19780880 Msa1280850:intron 25.0%
! AACCAACTTAAAACTTGATA+AGG + chr8_3:19780948-19780967 Msa1280850:intron 25.0%
! ACCAACTTAAAACTTGATAA+GGG + chr8_3:19780949-19780968 Msa1280850:intron 25.0%
! GTTAATCACAGATAAAACAA+TGG - chr8_3:19781155-19781174 None:intergenic 25.0%
!!! TTTTAAAAATGACGACATCA+AGG + chr8_3:19781711-19781730 Msa1280850:intron 25.0%
!! TATCATTGCTCTTTAAAGAA+AGG - chr8_3:19781853-19781872 None:intergenic 25.0%
!!! TCACAAAAGTTGTTGATTTT+TGG - chr8_3:19781885-19781904 None:intergenic 25.0%
!!! TCTACTTTTCCTTTGAAAAT+TGG - chr8_3:19781914-19781933 None:intergenic 25.0%
!! ATTTAATAAACATGGTTTGG+TGG + chr8_3:19782077-19782096 Msa1280850:intron 25.0%
! GATTAGTGAACATATTTACT+AGG - chr8_3:19782539-19782558 None:intergenic 25.0%
! TATGTTTCCTGAAAACTAAA+TGG - chr8_3:19782561-19782580 None:intergenic 25.0%
!! ATGTGGATTTAGAGTTTATT+CGG - chr8_3:19782672-19782691 None:intergenic 25.0%
! TCAATTAACTCTCTGTATAA+TGG - chr8_3:19782763-19782782 None:intergenic 25.0%
! ATATACGAGTAATACAAGAA+AGG + chr8_3:19782886-19782905 Msa1280850:intron 25.0%
! CTGTTTGTTTATTCATGTAT+TGG + chr8_3:19783096-19783115 Msa1280850:intron 25.0%
! TATATATATCTGTTAACACG+AGG - chr8_3:19783176-19783195 None:intergenic 25.0%
!!! TTTGGATGCAAATTTTAAGT+TGG + chr8_3:19783645-19783664 Msa1280850:intron 25.0%
!! ATGGTTAAATAGTAAGTTGA+AGG + chr8_3:19783789-19783808 Msa1280850:intron 25.0%
!! TGGTTAAATAGTAAGTTGAA+GGG + chr8_3:19783790-19783809 Msa1280850:intron 25.0%
! AATACTTAAGTACATCAACA+AGG + chr8_3:19783874-19783893 Msa1280850:CDS 25.0%
!!! TTCAGATTTTGATTTTGATG+TGG - chr8_3:19784063-19784082 None:intergenic 25.0%
!! TAATTTTGTGTGCAAATATC+CGG - chr8_3:19784099-19784118 None:intergenic 25.0%
! TATTTGCACACAAAATTAAC+TGG + chr8_3:19784101-19784120 Msa1280850:intron 25.0%
!!! TGCAAATCCGATTTTTTTTT+AGG + chr8_3:19784154-19784173 Msa1280850:intron 25.0%
! AAAAAAGATGGATACGATTA+TGG - chr8_3:19784187-19784206 None:intergenic 25.0%
! TATGGTTGAGTAAAAAAAGA+TGG - chr8_3:19784199-19784218 None:intergenic 25.0%
! AGAGGTTCTTATTATTCAAA+TGG - chr8_3:19784223-19784242 None:intergenic 25.0%
! TTTAATAGAAGGAACATTAC+TGG - chr8_3:19784939-19784958 Msa1280860:three_prime_UTR 25.0%
! TATAAAATGAGAATGAACAG+CGG - chr8_3:19785154-19785173 Msa1280860:three_prime_UTR 25.0%
! ATTTACATAATTACCAATCC+TGG + chr8_3:19785305-19785324 Msa1280850:intron 25.0%
! AAAAAGTCTTTGACAATATC+GGG - chr8_3:19785450-19785469 Msa1280860:three_prime_UTR 25.0%
! AACATAAGAAATGCATAGAA+AGG - chr8_3:19785664-19785683 Msa1280860:three_prime_UTR 25.0%
! TCAAATGCTTATTGATACAT+AGG + chr8_3:19785692-19785711 Msa1280850:intron 25.0%
GTAAAGAATGGAGACATAAA+TGG + chr8_3:19775422-19775441 Msa1280850:CDS 30.0%
AGACATAAATGGTGAAGAAT+TGG + chr8_3:19775433-19775452 Msa1280850:CDS 30.0%
CCTCTCTATTACATACTAAT+CGG - chr8_3:19775670-19775689 None:intergenic 30.0%
CGATTAGTATGTAATAGAGA+GGG + chr8_3:19775668-19775687 Msa1280850:CDS 30.0%
ATAAACGATCTAGATATTCG+AGG + chr8_3:19775708-19775727 Msa1280850:CDS 30.0%
TCACTCAATCAATGATACTT+AGG - chr8_3:19775866-19775885 None:intergenic 30.0%
ATAAACGATCTAGATATTCG+AGG + chr8_3:19775708-19775727 Msa1280850:CDS 30.0%
AATTTGTCGAAGTTAACTCA+TGG - chr8_3:19776015-19776034 None:intergenic 30.0%
TCACTCAATCAATGATACTT+AGG - chr8_3:19775866-19775885 None:intergenic 30.0%
TGTTAGAACATGTCAAATCT+TGG + chr8_3:19776110-19776129 Msa1280850:intron 30.0%
GTTAGAACATGTCAAATCTT+GGG + chr8_3:19776111-19776130 Msa1280850:intron 30.0%
!! TTTATGCTGGCTCAAAAATA+TGG + chr8_3:19776135-19776154 Msa1280850:intron 30.0%
GCTCAAAAATATGGTCATTA+AGG + chr8_3:19776144-19776163 Msa1280850:intron 30.0%
!! AAGGTATGGGTTTTTAAAAG+GGG + chr8_3:19776163-19776182 Msa1280850:intron 30.0%
! GGATTGACTATAAGTGTTTT+GGG + chr8_3:19776339-19776358 Msa1280850:intron 30.0%
! AAGAGGTACACAAACAAATA+AGG + chr8_3:19776543-19776562 Msa1280850:intron 30.0%
!! TGGTTGTTCTAAAACAATCA+AGG - chr8_3:19776672-19776691 None:intergenic 30.0%
TTCAATTTGAACAACTAGGT+TGG - chr8_3:19776852-19776871 None:intergenic 30.0%
AAGGTTCAATTTGAACAACT+AGG - chr8_3:19776856-19776875 None:intergenic 30.0%
TTAAAACCCCTTGTATTTCT+CGG + chr8_3:19776979-19776998 Msa1280850:intron 30.0%
TTTGTTCAGATTCAACCATT+CGG - chr8_3:19777151-19777170 None:intergenic 30.0%
ATGGTTGAATCTGAACAAAA+TGG + chr8_3:19777152-19777171 Msa1280850:intron 30.0%
AAACAAGATGAAGAAGATGA+TGG - chr8_3:19777655-19777674 None:intergenic 30.0%
!!! CCTTTTGTCTTTTAAGATTC+TGG - chr8_3:19777768-19777787 None:intergenic 30.0%
CCAGAATCTTAAAAGACAAA+AGG + chr8_3:19777765-19777784 Msa1280850:intron 30.0%
CATTCAAACTCACTACAAAA+TGG + chr8_3:19777922-19777941 Msa1280850:intron 30.0%
!! GATTCCATTTTGAAAACATG+AGG + chr8_3:19777967-19777986 Msa1280850:intron 30.0%
!!! GTAATGGGTCATTTCAATTT+TGG + chr8_3:19778053-19778072 Msa1280850:intron 30.0%
TAGCGTAAGTGTAAAAAAAC+GGG - chr8_3:19778244-19778263 None:intergenic 30.0%
CTAGCGTAAGTGTAAAAAAA+CGG - chr8_3:19778245-19778264 None:intergenic 30.0%
AGTTAACTCATGGTTATTTG+AGG + chr8_3:19778417-19778436 Msa1280850:intron 30.0%
GTTAACTCATGGTTATTTGA+GGG + chr8_3:19778418-19778437 Msa1280850:intron 30.0%
AATGTTGATATAGGTTAGTG+GGG - chr8_3:19778460-19778479 None:intergenic 30.0%
ATAAATGGTCTAGATATCCA+AGG - chr8_3:19778527-19778546 None:intergenic 30.0%
GATATAAACACAGATTCTGA+TGG - chr8_3:19778603-19778622 None:intergenic 30.0%
TTTACGGATGATGATATAAG+AGG - chr8_3:19778708-19778727 None:intergenic 30.0%
TGGATACTTACAAGAAGAAT+AGG - chr8_3:19778734-19778753 None:intergenic 30.0%
ATAAAGGATATGGATGGATA+TGG - chr8_3:19778754-19778773 None:intergenic 30.0%
TAACCTTAAATGGCTTCAAA+CGG - chr8_3:19778794-19778813 None:intergenic 30.0%
TTGTCGTGTCCAATTATATT+TGG - chr8_3:19778894-19778913 None:intergenic 30.0%
!!! TTGTCTTGCCATCATTTTTT+TGG + chr8_3:19779308-19779327 Msa1280850:intron 30.0%
!!! TGTCTTGCCATCATTTTTTT+GGG + chr8_3:19779309-19779328 Msa1280850:intron 30.0%
TTTGAGTCCCAAAAAAATGA+TGG - chr8_3:19779319-19779338 None:intergenic 30.0%
! CCGATGTTAATGTTTGTTAA+TGG - chr8_3:19779430-19779449 None:intergenic 30.0%
TAACAAACATTAACATCGGT+AGG + chr8_3:19779431-19779450 Msa1280850:intron 30.0%
TTTCATCTTCTTCTTTACTC+TGG - chr8_3:19779675-19779694 None:intergenic 30.0%
GTAAAGAAGAAGATGAAACA+TGG + chr8_3:19779677-19779696 Msa1280850:intron 30.0%
GGTATCAACTTGAAACATTT+AGG - chr8_3:19779853-19779872 None:intergenic 30.0%
!! TGTTTCAAGTTGATACCTTA+TGG + chr8_3:19779856-19779875 Msa1280850:intron 30.0%
TTAAACTCCAAATTAGAACG+GGG + chr8_3:19780039-19780058 Msa1280850:intron 30.0%
! TTTTGGTAGGTTATTTGAGT+TGG + chr8_3:19780178-19780197 Msa1280850:intron 30.0%
AAATGATCAAAACCTTCAGT+GGG - chr8_3:19780251-19780270 None:intergenic 30.0%
AAAATGATCAAAACCTTCAG+TGG - chr8_3:19780252-19780271 None:intergenic 30.0%
CAAATATATTCACCTTCAAC+GGG - chr8_3:19780293-19780312 None:intergenic 30.0%
AATTCGAAAGCAAAAGACAA+AGG - chr8_3:19780404-19780423 None:intergenic 30.0%
! TTTGTCTTTTGCTTTCGAAT+TGG + chr8_3:19780403-19780422 Msa1280850:intron 30.0%
GGATTTGATACAGTTTATCA+TGG + chr8_3:19780429-19780448 Msa1280850:intron 30.0%
!!! TCAAAATAGTTTTGTGGTCT+TGG + chr8_3:19780468-19780487 Msa1280850:intron 30.0%
! AAAAGTTGTCCTAGAGTTTT+TGG - chr8_3:19780502-19780521 None:intergenic 30.0%
! GGACAACTTTTACCATTATT+TGG + chr8_3:19780511-19780530 Msa1280850:intron 30.0%
!!! TCCCTTATCAAGTTTTAAGT+TGG - chr8_3:19780953-19780972 None:intergenic 30.0%
AGGAGTAAAATTGTGGAAAA+TGG - chr8_3:19781177-19781196 None:intergenic 30.0%
TAATGGAAGGAGTAAAATTG+TGG - chr8_3:19781184-19781203 None:intergenic 30.0%
! ACAATTTTACTCCTTCCATT+AGG + chr8_3:19781183-19781202 Msa1280850:intron 30.0%
! CAATTTTACTCCTTCCATTA+GGG + chr8_3:19781184-19781203 Msa1280850:intron 30.0%
!!! TTTAGTTTTGGAATGAACCA+TGG - chr8_3:19781269-19781288 None:intergenic 30.0%
TGAGAACATAGTATCACATA+CGG - chr8_3:19781625-19781644 None:intergenic 30.0%
! TTCAACTATCATAGTTTTCC+TGG + chr8_3:19781684-19781703 Msa1280850:intron 30.0%
!! ACTTTTCCTTTGAAAATTGG+TGG - chr8_3:19781911-19781930 None:intergenic 30.0%
TTGTAGATTATGCTTATACG+AGG + chr8_3:19782103-19782122 Msa1280850:intron 30.0%
!!! GTTTTTGGGTCAATAATTTG+TGG + chr8_3:19782348-19782367 Msa1280850:intron 30.0%
!!! CACTAATCCATTTAGTTTTC+AGG + chr8_3:19782551-19782570 Msa1280850:intron 30.0%
TATACAGAGAGTTAATTGAG+AGG + chr8_3:19782764-19782783 Msa1280850:intron 30.0%
ATACAGAGAGTTAATTGAGA+GGG + chr8_3:19782765-19782784 Msa1280850:intron 30.0%
! TTGTTCTAAACTGTGATACA+TGG + chr8_3:19782799-19782818 Msa1280850:intron 30.0%
GAAGAAAAAAGGAAGAGAAT+AGG - chr8_3:19783148-19783167 None:intergenic 30.0%
ACGAGGAAAAAGAAGAAAAA+AGG - chr8_3:19783159-19783178 None:intergenic 30.0%
!! AAAGTATTTTTGCTAAGCCA+AGG + chr8_3:19783266-19783285 Msa1280850:intron 30.0%
TCATCTATACTCATACCAAA+TGG + chr8_3:19783307-19783326 Msa1280850:intron 30.0%
! TCTGAAACTATCCAAATAAC+CGG + chr8_3:19784077-19784096 Msa1280850:intron 30.0%
!! CTGGTCTATTCTAAAATGAT+TGG + chr8_3:19784120-19784139 Msa1280850:intron 30.0%
AAAAATCGGATTTGCAAAAG+CGG - chr8_3:19784150-19784169 None:intergenic 30.0%
CATATAAAATGCCACAGTAA+TGG - chr8_3:19784349-19784368 None:intergenic 30.0%
! ACTGTGGCATTTTATATGAA+TGG + chr8_3:19784351-19784370 Msa1280850:intron 30.0%
ATACAATGCAAGAGAAACTT+AGG + chr8_3:19784430-19784449 Msa1280850:intron 30.0%
TACAATGCAAGAGAAACTTA+GGG + chr8_3:19784431-19784450 Msa1280850:intron 30.0%
TTTATTAGACCATAGTCACA+CGG + chr8_3:19784518-19784537 Msa1280850:intron 30.0%
AATTCACTTCTCTTCTACAA+TGG + chr8_3:19784546-19784565 Msa1280850:intron 30.0%
AATCATGTAACACATACATG+TGG + chr8_3:19784581-19784600 Msa1280850:intron 30.0%
ACAATTACATGTATGAGAGT+TGG - chr8_3:19784621-19784640 None:intergenic 30.0%
TGAACTTCAACATAAACTCT+AGG + chr8_3:19784648-19784667 Msa1280850:intron 30.0%
TTACATATTGATCCTCTCAT+TGG + chr8_3:19784734-19784753 Msa1280850:intron 30.0%
AATCTTGTTACTCTAATCGA+AGG + chr8_3:19784835-19784854 Msa1280850:intron 30.0%
CAAAATTTGAGAATCTACAG+TGG - chr8_3:19785080-19785099 Msa1280860:three_prime_UTR 30.0%
! CACTGTAGATTCTCAAATTT+TGG + chr8_3:19785078-19785097 Msa1280850:intron 30.0%
! TGTAGATTCTCAAATTTTGG+TGG + chr8_3:19785081-19785100 Msa1280850:intron 30.0%
!! AAATTTTGGTGGTTTGACTT+TGG + chr8_3:19785092-19785111 Msa1280850:intron 30.0%
! TAAATGATCACATGGGTTAT+TGG + chr8_3:19785253-19785272 Msa1280850:intron 30.0%
! AATTACCAATCCTGGATTTT+CGG + chr8_3:19785313-19785332 Msa1280850:intron 30.0%
ACTCCAATAGTATCATAACA+TGG + chr8_3:19785388-19785407 Msa1280850:intron 30.0%
CTCCAATAGTATCATAACAT+GGG + chr8_3:19785389-19785408 Msa1280850:intron 30.0%
! AGTATGAAGGACTTTGAAAA+TGG - chr8_3:19785562-19785581 Msa1280860:intron 30.0%
! AGTATGAAGGACTTTGAAAA+TGG - chr8_3:19785562-19785581 Msa1280860:intron 30.0%
ACTTATCAAGTAGAGTATGA+AGG - chr8_3:19785615-19785634 Msa1280860:three_prime_UTR 30.0%
! AATTGGATGGATAAAGCTTT+TGG - chr8_3:19785772-19785791 Msa1280860:three_prime_UTR 30.0%
AGAAAGAAGATGGAAGAAAT+TGG - chr8_3:19785789-19785808 Msa1280860:three_prime_UTR 30.0%
TTTGGTTGTTGAATCCTATA+GGG - chr8_3:19785817-19785836 Msa1280860:three_prime_UTR 30.0%
!!! TTTTGATTTGTTGCTTGATC+CGG - chr8_3:19785931-19785950 Msa1280860:intron 30.0%
CGAAGAAAGAAAAGAGGATA+TGG + chr8_3:19775478-19775497 Msa1280850:intron 35.0%
TTGACAGCTGATGATATAAG+AGG + chr8_3:19775524-19775543 Msa1280850:intron 35.0%
ACATCTATGCAGAATGTCAT+GGG + chr8_3:19775588-19775607 Msa1280850:intron 35.0%
GATGTCAACAAAGATTCTGA+TGG + chr8_3:19775629-19775648 Msa1280850:CDS 35.0%
CCGATTAGTATGTAATAGAG+AGG + chr8_3:19775667-19775686 Msa1280850:CDS 35.0%
AATTTGTCGGAGTTAACTCA+TGG - chr8_3:19775829-19775848 None:intergenic 35.0%
! AATGATAATGCCCTTGTTGA+TGG + chr8_3:19776072-19776091 Msa1280850:intron 35.0%
!! TCAAATCTTGGGTTTTATGC+TGG + chr8_3:19776122-19776141 Msa1280850:intron 35.0%
ACTACTTAAACAATGAAGGC+AGG + chr8_3:19776196-19776215 Msa1280850:intron 35.0%
CTACTTAAACAATGAAGGCA+GGG + chr8_3:19776197-19776216 Msa1280850:intron 35.0%
TTTGGTGAGATTCAACTAGT+CGG + chr8_3:19776318-19776337 Msa1280850:intron 35.0%
! CGGATTGACTATAAGTGTTT+TGG + chr8_3:19776338-19776357 Msa1280850:intron 35.0%
!!! ACTATAAGTGTTTTGGGATG+TGG + chr8_3:19776345-19776364 Msa1280850:intron 35.0%
TTAGTGAGAAGCTATCAAAG+AGG + chr8_3:19776526-19776545 Msa1280850:intron 35.0%
AGTTGCAAAACAATCAAGCA+GGG + chr8_3:19776750-19776769 Msa1280850:intron 35.0%
AATGAGAGAAGCTATCAAAG+AGG - chr8_3:19776896-19776915 None:intergenic 35.0%
!! GTATAAAGGAGTGTTAGTGA+TGG - chr8_3:19776928-19776947 None:intergenic 35.0%
AAACAACCGAGAAATACAAG+GGG - chr8_3:19776988-19777007 None:intergenic 35.0%
GAAACAACCGAGAAATACAA+GGG - chr8_3:19776989-19777008 None:intergenic 35.0%
TGAAACAACCGAGAAATACA+AGG - chr8_3:19776990-19777009 None:intergenic 35.0%
CAAAATTCCTTTCACACACA+CGG - chr8_3:19777399-19777418 None:intergenic 35.0%
CTAGCGCAAGTGTAAAAAAA+CGG + chr8_3:19777484-19777503 Msa1280850:intron 35.0%
! CTTCCCTCATGTTTTCAAAA+TGG - chr8_3:19777974-19777993 None:intergenic 35.0%
!!! GTATTTTTTGAATGGCTGCA+GGG + chr8_3:19778280-19778299 Msa1280850:intron 35.0%
AAATTACTCGATGTCTTGCA+AGG + chr8_3:19778482-19778501 Msa1280850:intron 35.0%
TTCAAACGATGGAGACATAA+AGG - chr8_3:19778770-19778789 None:intergenic 35.0%
AAAGGACTTTACATGTGGAA+AGG - chr8_3:19779040-19779059 None:intergenic 35.0%
AGAACAAAGAAAACCTAGAG+AGG + chr8_3:19779497-19779516 Msa1280850:intron 35.0%
TTGTTCTGTTCATAGAAGGT+TGG + chr8_3:19779563-19779582 Msa1280850:intron 35.0%
TGTTCTGTTCATAGAAGGTT+GGG + chr8_3:19779564-19779583 Msa1280850:intron 35.0%
TCTTCTTCTTTACTCTGGTA+TGG - chr8_3:19779670-19779689 None:intergenic 35.0%
! AAGTTAGTGCTTTTGTCACT+TGG + chr8_3:19779923-19779942 Msa1280850:intron 35.0%
TAAACTCCAAATTAGAACGG+GGG + chr8_3:19780040-19780059 Msa1280850:intron 35.0%
!! ACTTGCATATTTTAGGTGGT+TGG + chr8_3:19780067-19780086 Msa1280850:intron 35.0%
!!! GTTCTGTTAGCGATGTTTTT+TGG + chr8_3:19780161-19780180 Msa1280850:intron 35.0%
!!! TGTTAGCGATGTTTTTTGGT+AGG + chr8_3:19780165-19780184 Msa1280850:intron 35.0%
AATGATCAAAACCTTCAGTG+GGG - chr8_3:19780250-19780269 None:intergenic 35.0%
!!! AAATAGTTTTGTGGTCTTGG+AGG + chr8_3:19780471-19780490 Msa1280850:intron 35.0%
!!! AATAGTTTTGTGGTCTTGGA+GGG + chr8_3:19780472-19780491 Msa1280850:intron 35.0%
TGTGTAAAATCCTCCTGTTA+CGG - chr8_3:19780566-19780585 None:intergenic 35.0%
TTAAACTCCACACGTATTGT+TGG + chr8_3:19780621-19780640 Msa1280850:intron 35.0%
!!! ATTTTGACTATCCATCCTAG+AGG + chr8_3:19780669-19780688 Msa1280850:intron 35.0%
!!! TCTCACTTTTTAGTTTCCTC+TGG + chr8_3:19780769-19780788 Msa1280850:intron 35.0%
ACTAACCCATCTTTGTTACA+TGG + chr8_3:19781114-19781133 Msa1280850:intron 35.0%
CTAACCCATCTTTGTTACAT+GGG + chr8_3:19781115-19781134 Msa1280850:intron 35.0%
CTTACCCATGTAACAAAGAT+GGG - chr8_3:19781122-19781141 None:intergenic 35.0%
TGATAAATACCAGTGACTAC+AGG - chr8_3:19781378-19781397 None:intergenic 35.0%
!!! CGTCATTTTTAAAAGCATCC+AGG - chr8_3:19781705-19781724 None:intergenic 35.0%
GTTCATGATCATGATGCTAT+AGG + chr8_3:19781751-19781770 Msa1280850:intron 35.0%
ATGATCATGATGCTATAGGT+TGG + chr8_3:19781755-19781774 Msa1280850:intron 35.0%
! TGACAACCACCAATTTTCAA+AGG + chr8_3:19781902-19781921 Msa1280850:intron 35.0%
AGGAAAAGTAGATAGTGACA+CGG + chr8_3:19781922-19781941 Msa1280850:intron 35.0%
AGTTTCTCTCTCTATTGCTT+TGG - chr8_3:19781951-19781970 None:intergenic 35.0%
GAGAGATAAAGTTGTCACAT+AGG + chr8_3:19781990-19782009 Msa1280850:intron 35.0%
TCACATAGGTTGTCACAAAA+TGG + chr8_3:19782004-19782023 Msa1280850:intron 35.0%
TACATGACAATAATCGTCGT+TGG + chr8_3:19782182-19782201 Msa1280850:intron 35.0%
AAAACATGCTTGGCAAAAGT+GGG - chr8_3:19782333-19782352 None:intergenic 35.0%
AAAAACATGCTTGGCAAAAG+TGG - chr8_3:19782334-19782353 None:intergenic 35.0%
! ACTTTTGCCAAGCATGTTTT+TGG + chr8_3:19782333-19782352 Msa1280850:intron 35.0%
! CTTTTGCCAAGCATGTTTTT+GGG + chr8_3:19782334-19782353 Msa1280850:intron 35.0%
TATTGACCCAAAAACATGCT+TGG - chr8_3:19782343-19782362 None:intergenic 35.0%
TTTAGAGGAATTAGGCATCA+GGG + chr8_3:19782402-19782421 Msa1280850:intron 35.0%
GGAGCAAAGAATAATGTATG+TGG - chr8_3:19782689-19782708 None:intergenic 35.0%
AGATTGATGCCTAGATACTA+AGG + chr8_3:19782830-19782849 Msa1280850:intron 35.0%
CGAGTAATACAAGAAAGGTA+TGG + chr8_3:19782891-19782910 Msa1280850:intron 35.0%
! TACAAGAAAGGTATGGATGA+CGG + chr8_3:19782898-19782917 Msa1280850:intron 35.0%
GGCTACAACTTAAAGGAATT+GGG + chr8_3:19782919-19782938 Msa1280850:intron 35.0%
AACAAAAGTTGAGAGAGAAG+AGG + chr8_3:19782955-19782974 Msa1280850:intron 35.0%
GTTTATTCCTCCTAAAGTCA+TGG + chr8_3:19783060-19783079 Msa1280850:intron 35.0%
! AGGTGCAGTTGCTAAAATTT+TGG - chr8_3:19783128-19783147 None:intergenic 35.0%
! GAGTTCTGATTGAATCTCAA+CGG + chr8_3:19783549-19783568 Msa1280850:intron 35.0%
! TCTCAACGGTTATGTTCTTT+TGG + chr8_3:19783563-19783582 Msa1280850:intron 35.0%
! TTCTTTTGGATGTGGAAAGA+AGG + chr8_3:19783577-19783596 Msa1280850:intron 35.0%
TGAATGCAATTTACCAGTAG+AGG + chr8_3:19783622-19783641 Msa1280850:intron 35.0%
! GTGTTATTCACAACACATCT+TGG + chr8_3:19783681-19783700 Msa1280850:intron 35.0%
TTTAAGAGTTTGATTGCGAG+CGG + chr8_3:19783719-19783738 Msa1280850:intron 35.0%
!! TTAGATCATTTGGCTTGCTT+AGG + chr8_3:19783844-19783863 Msa1280850:intron 35.0%
CTTAAGTACATCAACAAGGA+AGG + chr8_3:19783878-19783897 Msa1280850:CDS 35.0%
! CAACAAGGAAGGTTGAATTT+TGG + chr8_3:19783889-19783908 Msa1280850:CDS 35.0%
!! TTCTCCATTTTTCGTCGAAT+TGG + chr8_3:19783942-19783961 Msa1280850:CDS 35.0%
AACACCAATTCGACGAAAAA+TGG - chr8_3:19783949-19783968 None:intergenic 35.0%
! TGTGGTTTTCTCTATGTAAC+CGG - chr8_3:19784045-19784064 None:intergenic 35.0%
TGTGCAAATATCCGGTTATT+TGG - chr8_3:19784091-19784110 None:intergenic 35.0%
GATGGATACGATTATGGATT+TGG - chr8_3:19784181-19784200 None:intergenic 35.0%
AATTATGAACCGTGTGACTA+TGG - chr8_3:19784530-19784549 None:intergenic 35.0%
GAGTGATGCAATGATAAGTA+AGG - chr8_3:19784676-19784695 None:intergenic 35.0%
GAAATGCTTATTCCAATGAG+AGG - chr8_3:19784749-19784768 None:intergenic 35.0%
TTCACGTCTTGATAAGAGTA+TGG - chr8_3:19785049-19785068 Msa1280860:three_prime_UTR 35.0%
TCGATCTCTTGATAAGAGTA+TGG - chr8_3:19785131-19785150 Msa1280860:three_prime_UTR 35.0%
GCTGCATTAAATGATCACAT+GGG + chr8_3:19785246-19785265 Msa1280850:intron 35.0%
AGCCCATGTTATGATACTAT+TGG - chr8_3:19785394-19785413 Msa1280860:three_prime_UTR 35.0%
!! TGAATGAGCATTGAGTATGA+AGG - chr8_3:19785575-19785594 Msa1280860:intron 35.0%
GAAATGCATAGAAAGGTAGA+AGG - chr8_3:19785657-19785676 Msa1280860:three_prime_UTR 35.0%
AAAACTGAGTATGCATATGC+AGG + chr8_3:19785728-19785747 Msa1280850:CDS 35.0%
GTATGCATATGCAGGTATAT+TGG + chr8_3:19785736-19785755 Msa1280850:intron 35.0%
AGAAGATGGAAGAAATTGGA+TGG - chr8_3:19785785-19785804 Msa1280860:three_prime_UTR 35.0%
CTTTGGTTGTTGAATCCTAT+AGG - chr8_3:19785818-19785837 Msa1280860:three_prime_UTR 35.0%
CTATAGGATTCAACAACCAA+AGG + chr8_3:19785816-19785835 Msa1280850:intron 35.0%
GAAGAATTGGCCAGTAGTAA+TGG + chr8_3:19775446-19775465 Msa1280850:CDS 40.0%
GTTTGGCGAAGAAAGAAAAG+AGG + chr8_3:19775472-19775491 Msa1280850:intron 40.0%
GACATCTATGCAGAATGTCA+TGG + chr8_3:19775587-19775606 Msa1280850:intron 40.0%
AAAACTACTTGAAGCCTTGC+AGG - chr8_3:19775755-19775774 None:intergenic 40.0%
GTTAACTCATGGTTGTGTGA+CGG - chr8_3:19775818-19775837 None:intergenic 40.0%
AAAACTACTTGAAGCCTTGC+AGG - chr8_3:19775755-19775774 None:intergenic 40.0%
GTTAACTCATGGTTGTGTGA+CGG - chr8_3:19775818-19775837 None:intergenic 40.0%
TTCTAACACTGTGTGTGTGA+AGG - chr8_3:19776098-19776117 None:intergenic 40.0%
GAAGGCAGGGCAAAAATAAA+AGG + chr8_3:19776210-19776229 Msa1280850:intron 40.0%
! AAGGTTCGAGTTCAACAACT+AGG + chr8_3:19776562-19776581 Msa1280850:intron 40.0%
! TTCGAGTTCAACAACTAGGT+AGG + chr8_3:19776566-19776585 Msa1280850:intron 40.0%
TCAAACACTGCAATTGATGC+CGG - chr8_3:19776645-19776664 None:intergenic 40.0%
CAGTTGCAAAACAATCAAGC+AGG + chr8_3:19776749-19776768 Msa1280850:intron 40.0%
TTGCAGGCTAAAGCAGATAA+TGG - chr8_3:19777230-19777249 None:intergenic 40.0%
!! GTTGCGTTGAGTTATTTTGC+AGG - chr8_3:19777246-19777265 None:intergenic 40.0%
AAGGGAGAGAATAAATGGTG+GGG - chr8_3:19777277-19777296 None:intergenic 40.0%
GAAGGGAGAGAATAAATGGT+GGG - chr8_3:19777278-19777297 None:intergenic 40.0%
CAAGGAAGGGAGAGAATAAA+TGG - chr8_3:19777282-19777301 None:intergenic 40.0%
! AGGGTCTAGATTTTGCAAGA+AGG - chr8_3:19777324-19777343 None:intergenic 40.0%
TTACGTGAGTTAACTCACAC+AGG + chr8_3:19777608-19777627 Msa1280850:intron 40.0%
AACATGAGGGAAGAAGATGA+TGG + chr8_3:19777981-19778000 Msa1280850:intron 40.0%
TTAAGTGAGTTAACTCACGC+AGG - chr8_3:19778155-19778174 None:intergenic 40.0%
!!! GCGCATGGGTATTTTTTGAA+TGG + chr8_3:19778272-19778291 Msa1280850:intron 40.0%
!!! GGTATTTTTTGAATGGCTGC+AGG + chr8_3:19778279-19778298 Msa1280850:intron 40.0%
CCTAATAAAGCCCATGTTGA+TGG - chr8_3:19778350-19778369 None:intergenic 40.0%
!! CCATCAACATGGGCTTTATT+AGG + chr8_3:19778347-19778366 Msa1280850:CDS 40.0%
AATGGATCGGAGTTAACTCA+TGG + chr8_3:19778407-19778426 Msa1280850:intron 40.0%
! TTGCAAGGTACTTAGTTGAG+TGG + chr8_3:19778497-19778516 Msa1280850:intron 40.0%
! AAGGTACTTAGTTGAGTGGT+TGG + chr8_3:19778501-19778520 Msa1280850:intron 40.0%
GACATCTATGCAGAATGTCA+TGG - chr8_3:19775587-19775606 None:intergenic 40.0%
AGGATTGTGATTTGAGTCAG+AGG - chr8_3:19778688-19778707 None:intergenic 40.0%
GGAGACATAAAGGATATGGA+TGG - chr8_3:19778760-19778779 None:intergenic 40.0%
CGATGGAGACATAAAGGATA+TGG - chr8_3:19778764-19778783 None:intergenic 40.0%
! AAGCCGTTTGAAGCCATTTA+AGG + chr8_3:19778788-19778807 Msa1280850:intron 40.0%
GACTTTACATGTGGAAAGGT+AGG - chr8_3:19779036-19779055 None:intergenic 40.0%
GTCGTTGTTCTGTTCATAGA+AGG + chr8_3:19779559-19779578 Msa1280850:intron 40.0%
!! CGAGACTTGCATATTTTAGG+TGG + chr8_3:19780063-19780082 Msa1280850:intron 40.0%
!! TGCATATTTTAGGTGGTTGG+AGG + chr8_3:19780070-19780089 Msa1280850:intron 40.0%
!! GCATATTTTAGGTGGTTGGA+GGG + chr8_3:19780071-19780090 Msa1280850:intron 40.0%
! GCAGTGTTATTAGGAAGGTA+GGG + chr8_3:19780093-19780112 Msa1280850:intron 40.0%
! CAGTGTTATTAGGAAGGTAG+GGG + chr8_3:19780094-19780113 Msa1280850:intron 40.0%
TTATTAGGAAGGTAGGGGAT+AGG + chr8_3:19780099-19780118 Msa1280850:intron 40.0%
GATCAAAGGATAATCTGCGT+AGG + chr8_3:19780320-19780339 Msa1280850:intron 40.0%
! CTTTTGCTTTCGAATTGGCT+AGG + chr8_3:19780408-19780427 Msa1280850:intron 40.0%
TTATATGGAGAGACCGTAAC+AGG + chr8_3:19780550-19780569 Msa1280850:intron 40.0%
CTTTCAACCAACAATACGTG+TGG - chr8_3:19780631-19780650 None:intergenic 40.0%
GTGAGATTTACACGACAGTT+AGG - chr8_3:19780755-19780774 None:intergenic 40.0%
CTTGTGCTTGAGGAATTGTT+TGG + chr8_3:19780797-19780816 Msa1280850:intron 40.0%
CTCCATATTATGTGGCTGAA+TGG + chr8_3:19780869-19780888 Msa1280850:intron 40.0%
GTCCATTCAGCCACATAATA+TGG - chr8_3:19780874-19780893 None:intergenic 40.0%
! TTCGACTCTGAGTGATGTTT+TGG + chr8_3:19780901-19780920 Msa1280850:intron 40.0%
GCTTACCCATGTAACAAAGA+TGG - chr8_3:19781123-19781142 None:intergenic 40.0%
TGTTACATGGGTAAGCAAGT+TGG + chr8_3:19781127-19781146 Msa1280850:intron 40.0%
CAAAGTCAAACCCTAATGGA+AGG - chr8_3:19781197-19781216 None:intergenic 40.0%
! TCCATTAGGGTTTGACTTTG+TGG + chr8_3:19781197-19781216 Msa1280850:intron 40.0%
TCCACAAAGTCAAACCCTAA+TGG - chr8_3:19781201-19781220 None:intergenic 40.0%
AAAGCAATACCTGTAGTCAC+TGG + chr8_3:19781366-19781385 Msa1280850:intron 40.0%
AAGTGGGACGTAGTTAAACT+TGG - chr8_3:19782317-19782336 None:intergenic 40.0%
! CTTTAGAGGAATTAGGCATC+AGG + chr8_3:19782401-19782420 Msa1280850:intron 40.0%
!! GGTGCAAGAGAAAGTATCAA+AGG + chr8_3:19782432-19782451 Msa1280850:intron 40.0%
TCTCCACAAACGGAAAGAAA+AGG + chr8_3:19782715-19782734 Msa1280850:intron 40.0%
CGGCTACAACTTAAAGGAAT+TGG + chr8_3:19782918-19782937 Msa1280850:intron 40.0%
AAAAGTTGAGAGAGAAGAGG+AGG + chr8_3:19782958-19782977 Msa1280850:intron 40.0%
AAAGTTGAGAGAGAAGAGGA+GGG + chr8_3:19782959-19782978 Msa1280850:intron 40.0%
TAAGCGTGTACCATGACTTT+AGG - chr8_3:19783073-19783092 None:intergenic 40.0%
!! GTATTTTTGCTAAGCCAAGG+AGG + chr8_3:19783269-19783288 Msa1280850:intron 40.0%
! CGGTTATGTTCTTTTGGATG+TGG + chr8_3:19783569-19783588 Msa1280850:intron 40.0%
GCAATTTACCAGTAGAGGTT+TGG + chr8_3:19783627-19783646 Msa1280850:intron 40.0%
ATTTGCATCCAAACCTCTAC+TGG - chr8_3:19783638-19783657 None:intergenic 40.0%
GAAGATGGACAAGCAATCTT+TGG - chr8_3:19783915-19783934 None:intergenic 40.0%
ATGGAGAATGCATCTGAAGA+TGG - chr8_3:19783930-19783949 None:intergenic 40.0%
AGCTTTCTGTGTGCTTCATA+TGG + chr8_3:19783991-19784010 Msa1280850:intron 40.0%
TTTCTGTGTGCTTCATATGG+TGG + chr8_3:19783994-19784013 Msa1280850:intron 40.0%
TTCATATGGTGGTAGTAGGT+AGG + chr8_3:19784005-19784024 Msa1280850:intron 40.0%
TCATATGGTGGTAGTAGGTA+GGG + chr8_3:19784006-19784025 Msa1280850:intron 40.0%
GTAGGGGTAAGCAAAATATC+CGG + chr8_3:19784023-19784042 Msa1280850:intron 40.0%
GGATTTGCATTCCATTACTG+TGG + chr8_3:19784335-19784354 Msa1280850:intron 40.0%
! GCAAATAATGGGATTGGGTT+AGG - chr8_3:19784890-19784909 None:intergenic 40.0%
! CCTTCGCAAATAATGGGATT+GGG - chr8_3:19784895-19784914 None:intergenic 40.0%
ATGCAGCCTTCGCAAATAAT+GGG - chr8_3:19784901-19784920 None:intergenic 40.0%
TATGCAGCCTTCGCAAATAA+TGG - chr8_3:19784902-19784921 None:intergenic 40.0%
TGCGAAGGCTGCATAAATAA+TGG + chr8_3:19784907-19784926 Msa1280850:intron 40.0%
GCGAAGGCTGCATAAATAAT+GGG + chr8_3:19784908-19784927 Msa1280850:intron 40.0%
GGCTGCATTAAATGATCACA+TGG + chr8_3:19785245-19785264 Msa1280850:intron 40.0%
! TTTGACAATATCGGGTTAGG+TGG - chr8_3:19785442-19785461 Msa1280860:three_prime_UTR 40.0%
GTCTTTGACAATATCGGGTT+AGG - chr8_3:19785445-19785464 Msa1280860:three_prime_UTR 40.0%
TAGGATTCAACAACCAAAGG+AGG + chr8_3:19785819-19785838 Msa1280850:intron 40.0%
! GTTTCTTTTAGCACCTCCTT+TGG - chr8_3:19785835-19785854 Msa1280860:three_prime_UTR 40.0%
TACGAAAAGAGTTCCAAAGC+CGG + chr8_3:19785909-19785928 Msa1280850:CDS 40.0%
GCCAGTAGTAATGGTGTGTT+TGG + chr8_3:19775455-19775474 Msa1280850:intron 45.0%
GCCAAACACACCATTACTAC+TGG - chr8_3:19775459-19775478 None:intergenic 45.0%
ACGATCTAGATATTCGAGGC+CGG + chr8_3:19775712-19775731 Msa1280850:CDS 45.0%
! GGACACTTAGTTTGAGTGAC+CGG - chr8_3:19775734-19775753 None:intergenic 45.0%
CTCAAACTAAGTGTCCTGCA+AGG + chr8_3:19775738-19775757 Msa1280850:CDS 45.0%
ACGATCTAGATATTCGAGGC+CGG + chr8_3:19775712-19775731 Msa1280850:CDS 45.0%
! GGACACTTAGTTTGAGTGAC+CGG - chr8_3:19775734-19775753 None:intergenic 45.0%
CTCAAACTAAGTGTCCTGCA+AGG + chr8_3:19775738-19775757 Msa1280850:CDS 45.0%
TGTGTGAAGGCCATCAACAA+GGG - chr8_3:19776085-19776104 None:intergenic 45.0%
GGCAGGGCAAAAATAAAAGG+TGG + chr8_3:19776213-19776232 Msa1280850:intron 45.0%
CTAAATGTCTTCGTCTGCTG+TGG - chr8_3:19776289-19776308 None:intergenic 45.0%
GGAAGGGAGAGAATAAATGG+TGG - chr8_3:19777279-19777298 None:intergenic 45.0%
ACCCTCATGATCACCTTTCT+GGG + chr8_3:19777339-19777358 Msa1280850:intron 45.0%
TCTAACACCGTGTGTGTGAA+AGG + chr8_3:19777389-19777408 Msa1280850:intron 45.0%
! GTATTTTCGGAATGGCTGCA+GGG - chr8_3:19777449-19777468 None:intergenic 45.0%
!!! AACTAGCGCAGGGGTATTTT+CGG - chr8_3:19777462-19777481 None:intergenic 45.0%
TACGCTAGTTAACTAGCGCA+TGG + chr8_3:19778257-19778276 Msa1280850:intron 45.0%
ACGCTAGTTAACTAGCGCAT+GGG + chr8_3:19778258-19778277 Msa1280850:intron 45.0%
TCGTGTGAAAGCCATCAACA+TGG + chr8_3:19778336-19778355 Msa1280850:CDS 45.0%
CGTGTGAAAGCCATCAACAT+GGG + chr8_3:19778337-19778356 Msa1280850:CDS 45.0%
CTTCAAACGGCTTCAAACGA+TGG - chr8_3:19778781-19778800 None:intergenic 45.0%
ATCACGATCTCATCCTCTCT+AGG - chr8_3:19779513-19779532 None:intergenic 45.0%
GATGAGATCGTGATCGCAAA+TGG + chr8_3:19779519-19779538 Msa1280850:intron 45.0%
AGATCGTGATCGCAAATGGA+AGG + chr8_3:19779523-19779542 Msa1280850:intron 45.0%
! GGGCGAGACTTGCATATTTT+AGG + chr8_3:19780060-19780079 Msa1280850:intron 45.0%
! GGCAGTGTTATTAGGAAGGT+AGG + chr8_3:19780092-19780111 Msa1280850:intron 45.0%
TCTGCGTAGGAGAAATGTGT+TGG + chr8_3:19780333-19780352 Msa1280850:intron 45.0%
GAGGGTTCTCCAAAAACTCT+AGG + chr8_3:19780490-19780509 Msa1280850:intron 45.0%
!! GTTTGTGTCGCTTGCAGAAA+AGG + chr8_3:19780598-19780617 Msa1280850:intron 45.0%
! AATGGGTTTAGCCTCTAGGA+TGG - chr8_3:19780683-19780702 None:intergenic 45.0%
TCCTAGAGGCTAAACCCATT+AGG + chr8_3:19780683-19780702 Msa1280850:intron 45.0%
CAGTTAGGCTACATACTAGC+CGG - chr8_3:19780740-19780759 None:intergenic 45.0%
TTCTTATGGGGATGCAACGT+TGG - chr8_3:19781316-19781335 None:intergenic 45.0%
ATGCAGTTGTGCTTCCATTG+CGG - chr8_3:19781422-19781441 None:intergenic 45.0%
!! AGACATCTCAGCTTGTTGCT+CGG - chr8_3:19781446-19781465 None:intergenic 45.0%
! GCACCTTTTCTTTCCGTTTG+TGG - chr8_3:19782721-19782740 None:intergenic 45.0%
! GGATGACGGCTACAACTTAA+AGG + chr8_3:19782912-19782931 Msa1280850:intron 45.0%
CTTCAACGTGTTTACCTCCT+TGG - chr8_3:19783286-19783305 None:intergenic 45.0%
AGAGTGAGAGTAGAGAGGTT+TGG + chr8_3:19783743-19783762 Msa1280850:intron 45.0%
GTGCTTCATATGGTGGTAGT+AGG + chr8_3:19784001-19784020 Msa1280850:intron 45.0%
CATATGGTGGTAGTAGGTAG+GGG + chr8_3:19784007-19784026 Msa1280850:intron 45.0%
CTAATTCTACCTGGAAGGGA+TGG - chr8_3:19784260-19784279 None:intergenic 45.0%
TCCCTTCCAGGTAGAATTAG+AGG + chr8_3:19784260-19784279 Msa1280850:intron 45.0%
GCCTCTAATTCTACCTGGAA+GGG - chr8_3:19784264-19784283 None:intergenic 45.0%
TGCAAGAGAAACTTAGGGAG+AGG + chr8_3:19784436-19784455 Msa1280850:intron 45.0%
CCCAATCCCATTATTTGCGA+AGG + chr8_3:19784892-19784911 Msa1280850:intron 45.0%
! GCCTTCGCAAATAATGGGAT+TGG - chr8_3:19784896-19784915 None:intergenic 45.0%
! TACCAATCCTGGATTTTCGG+CGG + chr8_3:19785316-19785335 Msa1280850:intron 45.0%
TAGGGTGGAGAGAAAGAAGA+TGG - chr8_3:19785799-19785818 Msa1280860:three_prime_UTR 45.0%
CTTCTTTCTCTCCACCCTAT+AGG + chr8_3:19785800-19785819 Msa1280850:intron 45.0%
GGTTGTTGAATCCTATAGGG+TGG - chr8_3:19785814-19785833 Msa1280860:three_prime_UTR 45.0%
AAGCAGCAACAAGAGACTGA+AGG + chr8_3:19785860-19785879 Msa1280850:CDS 45.0%
!!! GGCTTTGGAACTCTTTTCGT+AGG - chr8_3:19785910-19785929 Msa1280860:intron 45.0%
! TTTGTTGCTTGATCCGGCTT+TGG - chr8_3:19785925-19785944 Msa1280860:intron 45.0%
!!! GAATTTTAAAAAAAAATTAT+GGG - chr8_3:19777795-19777814 None:intergenic 5.0%
!!! TGAATTTTAAAAAAAAATTA+TGG - chr8_3:19777796-19777815 None:intergenic 5.0%
!!! ATTTTGTTAAAATATATATT+TGG - chr8_3:19782484-19782503 None:intergenic 5.0%
!! TATAAAAAAAAATATATATC+AGG - chr8_3:19782644-19782663 None:intergenic 5.0%
!! AATTAAATTAAATAAAACTA+AGG + chr8_3:19783345-19783364 Msa1280850:intron 5.0%
!! ATTAAATTAAATAAAACTAA+GGG + chr8_3:19783346-19783365 Msa1280850:intron 5.0%
!!! TATATAAAATTAATTTGTTA+CGG + chr8_3:19783432-19783451 Msa1280850:intron 5.0%
!!! AAGTTATATTATATTTTAAA+TGG + chr8_3:19785359-19785378 Msa1280850:intron 5.0%
GTGTGTGAAGGCCATCAACA+AGG - chr8_3:19776086-19776105 None:intergenic 50.0%
! TTCTGGGGATGTGGTTGCAT+TGG - chr8_3:19777114-19777133 None:intergenic 50.0%
GATCGACTACGAGTGTTCTG+GGG - chr8_3:19777129-19777148 None:intergenic 50.0%
GGATCGACTACGAGTGTTCT+GGG - chr8_3:19777130-19777149 None:intergenic 50.0%
ACACTCGTAGTCGATCCGAA+TGG + chr8_3:19777133-19777152 Msa1280850:intron 50.0%
GACCCTCATGATCACCTTTC+TGG + chr8_3:19777338-19777357 Msa1280850:intron 50.0%
GCCCAGAAAGGTGATCATGA+GGG - chr8_3:19777343-19777362 None:intergenic 50.0%
AGCCCAGAAAGGTGATCATG+AGG - chr8_3:19777344-19777363 None:intergenic 50.0%
GGGTTGTATGAAGCCCAGAA+AGG - chr8_3:19777355-19777374 None:intergenic 50.0%
! GGTATTTTCGGAATGGCTGC+AGG - chr8_3:19777450-19777469 None:intergenic 50.0%
TGCGCTAGTTAACTAGCGCA+GGG - chr8_3:19777472-19777491 None:intergenic 50.0%
TTGCGCTAGTTAACTAGCGC+AGG - chr8_3:19777473-19777492 None:intergenic 50.0%
!! CTTAGTTGAGTGGTTGGCCT+TGG + chr8_3:19778507-19778526 Msa1280850:intron 50.0%
CGTGATCGCAAATGGAAGGT+TGG + chr8_3:19779527-19779546 Msa1280850:intron 50.0%
! GGTTGGAGGGCAGTGTTATT+AGG + chr8_3:19780084-19780103 Msa1280850:intron 50.0%
! GGAGGGCAGTGTTATTAGGA+AGG + chr8_3:19780088-19780107 Msa1280850:intron 50.0%
TTAGGAAGGTAGGGGATAGG+CGG + chr8_3:19780102-19780121 Msa1280850:intron 50.0%
! ATAGGCGGTCCACTCTGTTT+TGG + chr8_3:19780117-19780136 Msa1280850:intron 50.0%
! TAGGCGGTCCACTCTGTTTT+GGG + chr8_3:19780118-19780137 Msa1280850:intron 50.0%
CGAATCCTCCCAAAACAGAG+TGG - chr8_3:19780129-19780148 None:intergenic 50.0%
GTTGACAGTAACCCCACTGA+AGG + chr8_3:19780236-19780255 Msa1280850:intron 50.0%
TATGGAGAGACCGTAACAGG+AGG + chr8_3:19780553-19780572 Msa1280850:intron 50.0%
!! GCCTAATGGGTTTAGCCTCT+AGG - chr8_3:19780687-19780706 None:intergenic 50.0%
TCAAGCACAAGACATGCCAG+AGG - chr8_3:19780788-19780807 None:intergenic 50.0%
TCTGGCATGTCTTGTGCTTG+AGG + chr8_3:19780787-19780806 Msa1280850:intron 50.0%
GGCACAATGATTTACCCGCT+AGG + chr8_3:19781059-19781078 Msa1280850:intron 50.0%
TATGGCATAGAGTGGCCTAG+CGG - chr8_3:19781077-19781096 None:intergenic 50.0%
GTGAGCTGTATGGCATAGAG+TGG - chr8_3:19781085-19781104 None:intergenic 50.0%
TCTATGCCATACAGCTCACG+TGG + chr8_3:19781086-19781105 Msa1280850:intron 50.0%
CTATGCCATACAGCTCACGT+GGG + chr8_3:19781087-19781106 Msa1280850:intron 50.0%
TTGTACCCACGTGAGCTGTA+TGG - chr8_3:19781095-19781114 None:intergenic 50.0%
GGGATAACGTAACACAGCCA+TGG + chr8_3:19781249-19781268 Msa1280850:intron 50.0%
TTATGGGGATGCAACGTTGG+AGG - chr8_3:19781313-19781332 None:intergenic 50.0%
TCAATTTGTCGTCGCCGCAA+TGG + chr8_3:19781405-19781424 Msa1280850:intron 50.0%
GGAATTAGGCATCAGGGACT+AGG + chr8_3:19782408-19782427 Msa1280850:intron 50.0%
ATTAGGCATCAGGGACTAGG+CGG + chr8_3:19782411-19782430 Msa1280850:intron 50.0%
TTCCGTTTGTGGAGACTGAG+CGG - chr8_3:19782710-19782729 None:intergenic 50.0%
GCGTGTACCATGACTTTAGG+AGG - chr8_3:19783070-19783089 None:intergenic 50.0%
GGCCTCTAATTCTACCTGGA+AGG - chr8_3:19784265-19784284 None:intergenic 50.0%
CAAGGGCCTCTAATTCTACC+TGG - chr8_3:19784269-19784288 None:intergenic 50.0%
GTCCAATCTGAGGGCTTCAA+GGG - chr8_3:19784286-19784305 None:intergenic 50.0%
CTTGAAGCCCTCAGATTGGA+CGG + chr8_3:19784285-19784304 Msa1280850:intron 50.0%
TTGAAGCCCTCAGATTGGAC+GGG + chr8_3:19784286-19784305 Msa1280850:intron 50.0%
! GTAGAGGTTGGGGAAGTGTA+TGG + chr8_3:19784314-19784333 Msa1280850:intron 50.0%
ATGAGCAATGCGCAGAGTGA+GGG - chr8_3:19785532-19785551 Msa1280860:intron 50.0%
AATGAGCAATGCGCAGAGTG+AGG - chr8_3:19785533-19785552 Msa1280860:intron 50.0%
!! CTACGAGTGTTCTGGGGATG+TGG - chr8_3:19777123-19777142 None:intergenic 55.0%
CGGATCGACTACGAGTGTTC+TGG - chr8_3:19777131-19777150 None:intergenic 55.0%
!!! GCGCAGGGGTATTTTCGGAA+TGG - chr8_3:19777457-19777476 None:intergenic 55.0%
GCGCTAGTTAACTAGCGCAG+GGG - chr8_3:19777471-19777490 None:intergenic 55.0%
GTCTCGCCCCCGTTCTAATT+TGG - chr8_3:19780049-19780068 None:intergenic 55.0%
GCTCAAAGCAGTCCCGTTGA+AGG + chr8_3:19780278-19780297 Msa1280850:intron 55.0%
ATGGCATAGAGTGGCCTAGC+GGG - chr8_3:19781076-19781095 None:intergenic 55.0%
CTCCGCTCAGTCTCCACAAA+CGG + chr8_3:19782705-19782724 Msa1280850:intron 55.0%
GCGGAAGAGTGAGAGTAGAG+AGG + chr8_3:19783738-19783757 Msa1280850:intron 55.0%
CGTCCAATCTGAGGGCTTCA+AGG - chr8_3:19784287-19784306 None:intergenic 55.0%
CCACAACCCGTCCAATCTGA+GGG - chr8_3:19784295-19784314 None:intergenic 55.0%
ACCACAACCCGTCCAATCTG+AGG - chr8_3:19784296-19784315 None:intergenic 55.0%
!! GATTGGACGGGTTGTGGTAG+AGG + chr8_3:19784298-19784317 Msa1280850:intron 55.0%
!! GACGGGTTGTGGTAGAGGTT+GGG + chr8_3:19784303-19784322 Msa1280850:intron 55.0%
! ACGGGTTGTGGTAGAGGTTG+GGG + chr8_3:19784304-19784323 Msa1280850:intron 55.0%
AGCCGCCGAAAATCCAGGAT+TGG - chr8_3:19785321-19785340 Msa1280860:three_prime_UTR 55.0%
AAGACAGCCGCCGAAAATCC+AGG - chr8_3:19785326-19785345 Msa1280860:three_prime_UTR 55.0%
! AGGGCGTGAGCGAAAAGTGC+AGG + chr8_3:19778299-19778318 Msa1280850:intron 60.0%
! GGGCGTGAGCGAAAAGTGCA+GGG + chr8_3:19778300-19778319 Msa1280850:intron 60.0%
! CGTGAGCGAAAAGTGCAGGG+CGG + chr8_3:19778303-19778322 Msa1280850:CDS 60.0%
!! GCGGTCCACTCTGTTTTGGG+AGG + chr8_3:19780121-19780140 Msa1280850:intron 60.0%
ACCTGGAAGGGATGGCGAGA+GGG - chr8_3:19784252-19784271 None:intergenic 60.0%
TACCTGGAAGGGATGGCGAG+AGG - chr8_3:19784253-19784272 None:intergenic 60.0%
GGCCCTTGAAGCCCTCAGAT+TGG + chr8_3:19784281-19784300 Msa1280850:intron 60.0%
!! CCCTCAGATTGGACGGGTTG+TGG + chr8_3:19784292-19784311 Msa1280850:intron 60.0%
!! GGACGGGTTGTGGTAGAGGT+TGG + chr8_3:19784302-19784321 Msa1280850:intron 60.0%
! CGCGAGCGAAAAGTGCAGGG+CGG - chr8_3:19777426-19777445 None:intergenic 65.0%
! GGGCGCGAGCGAAAAGTGCA+GGG - chr8_3:19777429-19777448 None:intergenic 65.0%
! AGGGCGCGAGCGAAAAGTGC+AGG - chr8_3:19777430-19777449 None:intergenic 65.0%
AAGGGATGGCGAGAGGGAGG+GGG - chr8_3:19784246-19784265 None:intergenic 65.0%
GAAGGGATGGCGAGAGGGAG+GGG - chr8_3:19784247-19784266 None:intergenic 65.0%
GGAAGGGATGGCGAGAGGGA+GGG - chr8_3:19784248-19784267 None:intergenic 65.0%
TGGAAGGGATGGCGAGAGGG+AGG - chr8_3:19784249-19784268 None:intergenic 65.0%
TCCCTCTCGCCATCCCTTCC+AGG + chr8_3:19784248-19784267 Msa1280850:intron 65.0%
ATGGCGAGAGGGAGGGGGAG+AGG - chr8_3:19784241-19784260 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 19775416 19785959 19775416 ID=Msa1280850;Name=Msa1280850
chr8_3 mRNA 19775416 19785959 19775416 ID=Msa1280850-mRNA-1;Parent=Msa1280850;Name=Msa1280850-mRNA-1;_AED=0.46;_eAED=0.71;_QI=0|0|0|0.66|1|1|6|0|197
chr8_3 exon 19775416 19775467 19775416 ID=Msa1280850-mRNA-1:exon:7290;Parent=Msa1280850-mRNA-1
chr8_3 exon 19775600 19775766 19775600 ID=Msa1280850-mRNA-1:exon:7291;Parent=Msa1280850-mRNA-1
chr8_3 exon 19778301 19778368 19778301 ID=Msa1280850-mRNA-1:exon:7292;Parent=Msa1280850-mRNA-1
chr8_3 exon 19783866 19783998 19783866 ID=Msa1280850-mRNA-1:exon:7293;Parent=Msa1280850-mRNA-1
chr8_3 exon 19785714 19785749 19785714 ID=Msa1280850-mRNA-1:exon:7294;Parent=Msa1280850-mRNA-1
chr8_3 exon 19785822 19785959 19785822 ID=Msa1280850-mRNA-1:exon:7295;Parent=Msa1280850-mRNA-1
chr8_3 CDS 19775416 19775467 19775416 ID=Msa1280850-mRNA-1:cds;Parent=Msa1280850-mRNA-1
chr8_3 CDS 19775600 19775766 19775600 ID=Msa1280850-mRNA-1:cds;Parent=Msa1280850-mRNA-1
chr8_3 CDS 19778301 19778368 19778301 ID=Msa1280850-mRNA-1:cds;Parent=Msa1280850-mRNA-1
chr8_3 CDS 19783866 19783998 19783866 ID=Msa1280850-mRNA-1:cds;Parent=Msa1280850-mRNA-1
chr8_3 CDS 19785714 19785749 19785714 ID=Msa1280850-mRNA-1:cds;Parent=Msa1280850-mRNA-1
chr8_3 CDS 19785822 19785959 19785822 ID=Msa1280850-mRNA-1:cds;Parent=Msa1280850-mRNA-1
Gene Sequence

>Msa1280850

ATGGCTGTAAAGAATGGAGACATAAATGGTGAAGAATTGGCCAGTAGTAATGAATGTCATGGGTTTGCGATAAGAAAAGATGATGTCAACAAAGATTCTGATGGTAATATAGTTTCTCGCCGATTAGTATGTAATAGAGAGGGTGAGAGTAAAAATAAGAATAAACGATCTAGATATTCGAGGCCGGTCACTCAAACTAAGTGTCCTGCAAGGCTTCAAGGCGTGAGCGAAAAGTGCAGGGCGGAGAGTAAAATTCGTGTGAAAGCCATCAACATGGGCTTTATTAGGAATCAAGAATACTTAAGTACATCAACAAGGAAGGTTGAATTTTGGCCAAAGATTGCTTGTCCATCTTCAGATGCATTCTCCATTTTTCGTCGAATTGGTGTTGTTCAATCTGCATCATTAGACGAGCTTTCTGTTCTTCATGCTCTAAAACTGAGTATGCATATGCAGGATTCAACAACCAAAGGAGGTGCTAAAAGAAACTACACAAGCAGCAACAAGAGACTGAAGGATACAACACTAGCAACAATGAAGACCTACGAAAAGAGTTCCAAAGCCGGATCAAGCAACAAATCAAAAAAGTTATGA
Protein sequence

>Msa1280850

MAVKNGDINGEELASSNECHGFAIRKDDVNKDSDGNIVSRRLVCNREGESKNKNKRSRYSRPVTQTKCPARLQGVSEKCRAESKIRVKAINMGFIRNQEYLSTSTRKVEFWPKIACPSSDAFSIFRRIGVVQSASLDELSVLHALKLSMHMQDSTTKGGAKRNYTSSNKRLKDTTLATMKTYEKSSKAGSSNKSKKL*