Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1282230 | sp|Q94CK9|LRP1_ARATH | 39.077 | 325 | 176 | 8 | 1 | 320 | 1 | 308 | 1.99e-55 | 186 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1282230 | G7LG16 | 96.024 | 327 | 11 | 1 | 1 | 325 | 1 | 327 | 0.0 | 659 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1282230 | TF | SRS |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1282230 | MtrunA17_Chr8g0353111 | 96.024 | 327 | 11 | 1 | 1 | 325 | 1 | 327 | 0.0 | 659 |
| Msa1282230 | MtrunA17_Chr3g0082511 | 61.224 | 343 | 99 | 16 | 1 | 324 | 1 | 328 | 1.29e-112 | 329 |
| Msa1282230 | MtrunA17_Chr5g0441921 | 44.074 | 270 | 124 | 8 | 42 | 296 | 34 | 291 | 1.57e-51 | 173 |
| Msa1282230 | MtrunA17_Chr8g0372461 | 40.698 | 172 | 73 | 2 | 109 | 280 | 108 | 250 | 4.64e-34 | 127 |
| Msa1282230 | MtrunA17_Chr5g0404781 | 44.099 | 161 | 83 | 2 | 122 | 282 | 100 | 253 | 6.93e-33 | 124 |
| Msa1282230 | MtrunA17_Chr1g0155791 | 39.752 | 161 | 84 | 1 | 122 | 282 | 122 | 269 | 2.98e-32 | 122 |
| Msa1282230 | MtrunA17_Chr3g0142171 | 38.710 | 186 | 82 | 6 | 122 | 302 | 86 | 244 | 7.24e-30 | 115 |
| Msa1282230 | MtrunA17_Chr4g0035591 | 35.632 | 174 | 74 | 3 | 111 | 284 | 9 | 144 | 6.02e-26 | 102 |
| Msa1282230 | MtrunA17_Chr2g0281741 | 62.857 | 35 | 13 | 0 | 122 | 156 | 150 | 184 | 1.01e-11 | 63.2 |
| Msa1282230 | MtrunA17_Chr0c01g0489181 | 54.348 | 46 | 21 | 0 | 111 | 156 | 56 | 101 | 1.20e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1282230 | AT5G12330.1 | 39.077 | 325 | 176 | 8 | 1 | 320 | 1 | 308 | 2.02e-56 | 186 |
| Msa1282230 | AT5G12330.2 | 39.077 | 325 | 176 | 8 | 1 | 320 | 1 | 308 | 2.02e-56 | 186 |
| Msa1282230 | AT5G12330.4 | 39.077 | 325 | 176 | 8 | 1 | 320 | 88 | 395 | 6.19e-56 | 187 |
| Msa1282230 | AT3G54430.1 | 44.571 | 175 | 65 | 4 | 120 | 293 | 39 | 182 | 1.79e-38 | 135 |
| Msa1282230 | AT1G75520.1 | 44.444 | 162 | 83 | 3 | 122 | 280 | 125 | 282 | 1.86e-37 | 137 |
| Msa1282230 | AT5G66350.3 | 43.575 | 179 | 83 | 3 | 109 | 287 | 107 | 267 | 7.83e-37 | 135 |
| Msa1282230 | AT5G66350.2 | 43.575 | 179 | 83 | 3 | 109 | 287 | 107 | 267 | 9.27e-37 | 135 |
| Msa1282230 | AT5G66350.1 | 43.575 | 179 | 83 | 3 | 109 | 287 | 107 | 267 | 1.08e-36 | 134 |
| Msa1282230 | AT3G51060.1 | 45.625 | 160 | 63 | 4 | 122 | 278 | 144 | 282 | 1.24e-34 | 130 |
| Msa1282230 | AT1G19790.2 | 43.210 | 162 | 78 | 3 | 122 | 280 | 119 | 269 | 3.10e-33 | 125 |
| Msa1282230 | AT1G19790.1 | 43.210 | 162 | 78 | 3 | 122 | 280 | 119 | 269 | 3.10e-33 | 125 |
| Msa1282230 | AT4G36260.1 | 33.921 | 227 | 131 | 5 | 59 | 280 | 32 | 244 | 4.46e-30 | 117 |
| Msa1282230 | AT2G21400.4 | 38.272 | 162 | 71 | 4 | 120 | 281 | 7 | 139 | 1.68e-29 | 112 |
| Msa1282230 | AT2G21400.2 | 38.272 | 162 | 71 | 4 | 120 | 281 | 8 | 140 | 1.69e-29 | 112 |
| Msa1282230 | AT2G18120.1 | 36.810 | 163 | 77 | 3 | 122 | 284 | 72 | 208 | 2.05e-29 | 112 |
| Msa1282230 | AT2G18120.2 | 37.195 | 164 | 73 | 3 | 122 | 284 | 72 | 206 | 2.19e-29 | 112 |
| Msa1282230 | AT2G21400.3 | 35.802 | 162 | 60 | 2 | 120 | 281 | 8 | 125 | 7.59e-28 | 107 |
| Msa1282230 | AT2G21400.1 | 35.802 | 162 | 60 | 2 | 120 | 281 | 7 | 124 | 8.04e-28 | 107 |
| Msa1282230 | AT5G12330.3 | 37.089 | 213 | 117 | 6 | 1 | 208 | 1 | 201 | 8.14e-27 | 105 |
| Msa1282230 | AT5G33210.2 | 70.000 | 50 | 15 | 0 | 122 | 171 | 17 | 66 | 3.03e-20 | 84.7 |
| Msa1282230 | AT5G33210.1 | 70.000 | 50 | 15 | 0 | 122 | 171 | 52 | 101 | 3.06e-19 | 84.0 |
Find 81 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAATAGAATAGAGAGATTT+TGG | 0.139294 | 8_3:+22474948 | None:intergenic |
| TGCTTGTTGAGATTGCTTTA+AGG | 0.200707 | 8_3:-22473273 | Msa1282230:intron |
| TGAAGAAAATGGTGAGTTTA+GGG | 0.286532 | 8_3:-22474435 | Msa1282230:CDS |
| GATGAAGGTAAGGGAAGATT+TGG | 0.304120 | 8_3:+22474677 | None:intergenic |
| ATATTCTCATTGTTATTGTT+AGG | 0.304242 | 8_3:+22474587 | None:intergenic |
| GTGAAGAAAATGGTGAGTTT+AGG | 0.324594 | 8_3:-22474436 | Msa1282230:CDS |
| CTATTAGAACCAAGTCTCTT+AGG | 0.357173 | 8_3:+22474759 | None:intergenic |
| TGAAGATGAACTTGCTTACT+TGG | 0.373159 | 8_3:-22473477 | Msa1282230:CDS |
| AGTGATGGTGGTGCTTCTTC+TGG | 0.380721 | 8_3:-22474248 | Msa1282230:CDS |
| GTAAAGAGAGGATGAGGTTA+AGG | 0.383053 | 8_3:+22474848 | None:intergenic |
| TGTTGCAAAATGAACATGTT+AGG | 0.386699 | 8_3:-22474782 | Msa1282230:exon |
| TATTCTCATTGTTATTGTTA+GGG | 0.402170 | 8_3:+22474588 | None:intergenic |
| GAACTTAGATATCGATGTTA+CGG | 0.405757 | 8_3:-22470499 | Msa1282230:three_prime_UTR |
| TTGGCTACTGTGAATATTAG+TGG | 0.419206 | 8_3:-22473458 | Msa1282230:CDS |
| AACTTAGATATCGATGTTAC+GGG | 0.420068 | 8_3:-22470498 | Msa1282230:three_prime_UTR |
| ATGTTCTTCCTCTGCAATTG+AGG | 0.420350 | 8_3:-22473321 | Msa1282230:CDS |
| TGCCAACAGCAGATACTCTA+TGG | 0.431824 | 8_3:+22473504 | None:intergenic |
| CGGCGTCGATGAGGCGGGAC+CGG | 0.436701 | 8_3:-22474298 | Msa1282230:CDS |
| TGGATTATGATCTGATGAAA+TGG | 0.439260 | 8_3:+22474697 | None:intergenic |
| ATGTGTGCGTGATTGTGATT+TGG | 0.443717 | 8_3:+22474889 | None:intergenic |
| TGTTGGTTGTGAAGTGATGA+AGG | 0.446919 | 8_3:+22474728 | None:intergenic |
| TATGATCTGATGAAATGGTT+TGG | 0.460879 | 8_3:+22474702 | None:intergenic |
| TTTAGGGTTTGTCAAGATTG+TGG | 0.461202 | 8_3:-22474419 | Msa1282230:CDS |
| GAATTGCAACTTGGAAGTAA+TGG | 0.469782 | 8_3:-22473365 | Msa1282230:CDS |
| CAATCTCAACAAGCAGAAGC+AGG | 0.470698 | 8_3:+22473281 | None:intergenic |
| TAGTGCTGATGATGAAGGTA+AGG | 0.474808 | 8_3:+22474667 | None:intergenic |
| TAGAGAATTTACATAACAAC+AGG | 0.477976 | 8_3:+22470565 | None:intergenic |
| ATGATGGGGTGTGAAGAAAA+TGG | 0.479641 | 8_3:-22474446 | Msa1282230:CDS |
| TCATCATTACTTGTTGTGGT+TGG | 0.483361 | 8_3:+22474528 | None:intergenic |
| TCAGCACTAAGTGTTGGTCT+TGG | 0.487088 | 8_3:-22474653 | Msa1282230:CDS |
| AAAGGGTTTCTCTATGATCA+AGG | 0.488489 | 8_3:-22473425 | Msa1282230:CDS |
| CATGTTAGGCCTAAGAGACT+TGG | 0.493330 | 8_3:-22474768 | Msa1282230:CDS |
| GTAGGATTTCCATGCATAAC+CGG | 0.497416 | 8_3:+22470592 | None:intergenic |
| TTCATCATCATTACTTGTTG+TGG | 0.498315 | 8_3:+22474524 | None:intergenic |
| AATCAAAATTCTCTGCCTCT+TGG | 0.499143 | 8_3:+22474223 | None:intergenic |
| CGTGAAGAGCACGTGGATAC+CGG | 0.501925 | 8_3:-22474318 | Msa1282230:CDS |
| ATTAGTGGCCATGTATTCAA+AGG | 0.512383 | 8_3:-22473443 | Msa1282230:CDS |
| GAAGCAGGGTAAGCACTAGT+TGG | 0.512667 | 8_3:+22473296 | None:intergenic |
| TGTAATGTAAAGAGAGGATG+AGG | 0.514738 | 8_3:+22474842 | None:intergenic |
| ATTGTAGCTATAAAAGATGC+AGG | 0.519421 | 8_3:-22474379 | Msa1282230:CDS |
| CAACTTGGAAGTAATGGAAG+TGG | 0.519956 | 8_3:-22473359 | Msa1282230:CDS |
| GTTCTTTCTCCGGTTATGCA+TGG | 0.525100 | 8_3:-22470601 | Msa1282230:three_prime_UTR |
| GGTGAGTAGTGGTTAGGAGT+GGG | 0.529385 | 8_3:+22474624 | None:intergenic |
| GGCAAAGTCTGCTTGAAACC+AGG | 0.531084 | 8_3:+22473560 | None:intergenic |
| AGAGAAACCCTTTGAATACA+TGG | 0.531479 | 8_3:+22473435 | None:intergenic |
| ATGGCAGGTAGTTCTTTCTC+CGG | 0.531683 | 8_3:-22470611 | Msa1282230:intron |
| TTAGTGGCCATGTATTCAAA+GGG | 0.533384 | 8_3:-22473442 | Msa1282230:CDS |
| GCAGGCGCGCGAACATAGCG+AGG | 0.545668 | 8_3:+22473539 | None:intergenic |
| AGGACTTGTTGTAAAGGTCG+TGG | 0.546270 | 8_3:-22474359 | Msa1282230:CDS |
| GATGAGGGTGAGTAGTGGTT+AGG | 0.546291 | 8_3:+22474618 | None:intergenic |
| AGATGCAGGACTTGTTGTAA+AGG | 0.546985 | 8_3:-22474365 | Msa1282230:CDS |
| TCATCATCACAGAATAATGC+TGG | 0.553164 | 8_3:-22474200 | Msa1282230:CDS |
| GCTTAAACTTCTTGTTCTAG+TGG | 0.556742 | 8_3:+22474145 | None:intergenic |
| CTATGGCACTTGAAAACAGC+AGG | 0.559201 | 8_3:+22473521 | None:intergenic |
| GGGTGAGTAGTGGTTAGGAG+TGG | 0.563980 | 8_3:+22474623 | None:intergenic |
| GATACCGGCGTCGATGAGGC+GGG | 0.565411 | 8_3:-22474303 | Msa1282230:CDS |
| TACATAACAACAGGTACTGT+AGG | 0.571608 | 8_3:+22470574 | None:intergenic |
| GGAGAATGTAATGTAAAGAG+AGG | 0.573573 | 8_3:+22474836 | None:intergenic |
| ACACTTAGTGCTGATGATGA+AGG | 0.573973 | 8_3:+22474662 | None:intergenic |
| TGTGTTTCAGAATTGCAACT+TGG | 0.580875 | 8_3:-22473374 | Msa1282230:CDS |
| TGCCATAGAGTATCTGCTGT+TGG | 0.581569 | 8_3:-22473506 | Msa1282230:CDS |
| TTGATGATGAGGGTGAGTAG+TGG | 0.583936 | 8_3:+22474613 | None:intergenic |
| GAGGCGGGACCGGAGTATGA+TGG | 0.586244 | 8_3:-22474288 | Msa1282230:CDS |
| CGGAGTATGATGGTGGCTGA+AGG | 0.587151 | 8_3:-22474278 | Msa1282230:CDS |
| GCTGAAGGTGGTGACAGTGA+TGG | 0.591111 | 8_3:-22474263 | Msa1282230:CDS |
| GGATACCGGCGTCGATGAGG+CGG | 0.591264 | 8_3:-22474304 | Msa1282230:CDS |
| GAAGGTGGTGACAGTGATGG+TGG | 0.597594 | 8_3:-22474260 | Msa1282230:CDS |
| CGTGGATACCGGCGTCGATG+AGG | 0.610218 | 8_3:-22474307 | Msa1282230:CDS |
| AGAGTATCTGCTGTTGGCAA+TGG | 0.611315 | 8_3:-22473500 | Msa1282230:CDS |
| TCATCATCAGCACTAAGTGT+TGG | 0.620780 | 8_3:-22474659 | Msa1282230:CDS |
| GTTGTGGTTGGCACATCTTG+AGG | 0.623886 | 8_3:+22474540 | None:intergenic |
| AATCTCAACAAGCAGAAGCA+GGG | 0.625538 | 8_3:+22473282 | None:intergenic |
| AGTGCTGATGATGAAGGTAA+GGG | 0.630191 | 8_3:+22474668 | None:intergenic |
| GCGGGACCGGAGTATGATGG+TGG | 0.640592 | 8_3:-22474285 | Msa1282230:CDS |
| GTGCTTCTTCTGGTACCAAG+AGG | 0.651535 | 8_3:-22474238 | Msa1282230:CDS |
| CTTCAGCCACCATCATACTC+CGG | 0.656848 | 8_3:+22474279 | None:intergenic |
| AGTATGATGGTGGCTGAAGG+TGG | 0.658861 | 8_3:-22474275 | Msa1282230:CDS |
| ATAACTAGCTCTTGTCACCA+AGG | 0.669802 | 8_3:-22474116 | Msa1282230:intron |
| AGTTGGAACCTCAATTGCAG+AGG | 0.675832 | 8_3:+22473313 | None:intergenic |
| GTACTCACGTGAAGAGCACG+TGG | 0.684544 | 8_3:-22474325 | Msa1282230:CDS |
| AGTTGCAATTCTGAAACACA+AGG | 0.685469 | 8_3:+22473377 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATATGATTATTTAATCA+TGG | + | chr8_3:22471356-22471375 | None:intergenic | 10.0% |
| !!! | TTTGTTATTTCATAAATTTA+AGG | - | chr8_3:22471599-22471618 | Msa1282230:intron | 10.0% |
| !!! | TTGTTATTTCATAAATTTAA+GGG | - | chr8_3:22471600-22471619 | Msa1282230:intron | 10.0% |
| !! | ATAATGTAAATATTCTAAAT+AGG | + | chr8_3:22472380-22472399 | None:intergenic | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | + | chr8_3:22472670-22472689 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr8_3:22472671-22472690 | None:intergenic | 10.0% |
| !! | ATAGTAAATAGTTAAATATA+CGG | - | chr8_3:22473515-22473534 | Msa1282230:CDS | 10.0% |
| !! | TATATTAAAAATTATGTGAA+TGG | + | chr8_3:22473846-22473865 | None:intergenic | 10.0% |
| !!! | TTTGGTTTTGTTTATTTATT+GGG | + | chr8_3:22470617-22470636 | None:intergenic | 15.0% |
| !!! | TTTTGGTTTTGTTTATTTAT+TGG | + | chr8_3:22470618-22470637 | None:intergenic | 15.0% |
| !!! | GTTTACAAAACTTTTTTTTA+TGG | - | chr8_3:22471382-22471401 | Msa1282230:intron | 15.0% |
| !! | ATTAAAAAAAGTGAGTAAAT+AGG | + | chr8_3:22471669-22471688 | None:intergenic | 15.0% |
| !! | TATTGTTATAATGATAAGTT+TGG | - | chr8_3:22472223-22472242 | Msa1282230:intron | 15.0% |
| !! | AGTTGTATTAAAAATTGAAA+TGG | + | chr8_3:22472312-22472331 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | + | chr8_3:22472669-22472688 | None:intergenic | 15.0% |
| !! | TTGAAATTGTATTCTTATTA+AGG | - | chr8_3:22472797-22472816 | Msa1282230:intron | 15.0% |
| !!! | TATTTAAAAGTGTCTAATTA+AGG | - | chr8_3:22473599-22473618 | Msa1282230:intron | 15.0% |
| !! | AATGTAGTATTAAATGATTA+AGG | - | chr8_3:22474205-22474224 | Msa1282230:CDS | 15.0% |
| !!! | AATATTTTTTTTTCTTCTGA+TGG | - | chr8_3:22474799-22474818 | Msa1282230:five_prime_UTR | 15.0% |
| !!! | TATTCTCATTGTTATTGTTA+GGG | + | chr8_3:22470844-22470863 | None:intergenic | 20.0% |
| !!! | ATATTCTCATTGTTATTGTT+AGG | + | chr8_3:22470845-22470864 | None:intergenic | 20.0% |
| !!! | TCATTGTTACTTTATAAACT+AGG | - | chr8_3:22471692-22471711 | Msa1282230:intron | 20.0% |
| !!! | TTTTTCTATTAACCAAACTT+AGG | + | chr8_3:22471748-22471767 | None:intergenic | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | + | chr8_3:22472275-22472294 | None:intergenic | 20.0% |
| !!! | TTAAGTTTAAAATTGTGCAT+TGG | - | chr8_3:22472542-22472561 | Msa1282230:intron | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | + | chr8_3:22472646-22472665 | None:intergenic | 20.0% |
| !! | ATCTAAGGAATTGAAAAATT+AGG | + | chr8_3:22473301-22473320 | None:intergenic | 20.0% |
| !! | GTCAATAACTAGTAATTTAA+TGG | + | chr8_3:22473344-22473363 | None:intergenic | 20.0% |
| !! | TTCAAAACAATCACAAAATT+TGG | + | chr8_3:22473725-22473744 | None:intergenic | 20.0% |
| !! | TAAATATATAGGGGTAATAT+AGG | + | chr8_3:22474163-22474182 | None:intergenic | 20.0% |
| !! | TAAATGATTAAGGTTATTGT+AGG | - | chr8_3:22474215-22474234 | Msa1282230:CDS | 20.0% |
| !! | TCAAAATGTGACAATTAAAA+AGG | - | chr8_3:22474301-22474320 | Msa1282230:CDS | 20.0% |
| !! | TAGCTACAATAATATGTAAT+GGG | + | chr8_3:22474628-22474647 | None:intergenic | 20.0% |
| !!! | CAATTCATAAAGATTTTTGT+AGG | - | chr8_3:22474741-22474760 | Msa1282230:CDS | 20.0% |
| !! | AGAATAGAATAGAGAGATTT+TGG | + | chr8_3:22470484-22470503 | None:intergenic | 25.0% |
| !!! | TTATGTGTTGTTTTCTTTAG+GGG | + | chr8_3:22470520-22470539 | None:intergenic | 25.0% |
| !!! | GTTATGTGTTGTTTTCTTTA+GGG | + | chr8_3:22470521-22470540 | None:intergenic | 25.0% |
| ! | AAGAAACAAAAACTTGATGA+TGG | - | chr8_3:22470967-22470986 | Msa1282230:intron | 25.0% |
| !! | AGAAACAAAAACTTGATGAT+GGG | - | chr8_3:22470968-22470987 | Msa1282230:intron | 25.0% |
| ! | AATTGTGTATATCCTAAGTT+TGG | - | chr8_3:22471733-22471752 | Msa1282230:intron | 25.0% |
| ! | ACAATACAAGTACATCAAAA+GGG | + | chr8_3:22472209-22472228 | None:intergenic | 25.0% |
| ! | AACAATACAAGTACATCAAA+AGG | + | chr8_3:22472210-22472229 | None:intergenic | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr8_3:22472276-22472295 | None:intergenic | 25.0% |
| ! | CTAAATAGGTCAAGTAATAT+GGG | + | chr8_3:22472366-22472385 | None:intergenic | 25.0% |
| ! | TCTAAATAGGTCAAGTAATA+TGG | + | chr8_3:22472367-22472386 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | + | chr8_3:22472647-22472666 | None:intergenic | 25.0% |
| !! | TACCTTATGATTTTACCATT+AGG | - | chr8_3:22472987-22473006 | Msa1282230:intron | 25.0% |
| ! | TTCCTAATGGTAAAATCATA+AGG | + | chr8_3:22472992-22473011 | None:intergenic | 25.0% |
| ! | ATATTGACATCATTTCCTAA+TGG | + | chr8_3:22473005-22473024 | None:intergenic | 25.0% |
| ! | TTTCAATTCCTTAGATTGAT+TGG | - | chr8_3:22473305-22473324 | Msa1282230:CDS | 25.0% |
| ! | TCAATAAACCAATCAATCTA+AGG | + | chr8_3:22473316-22473335 | None:intergenic | 25.0% |
| ! | ACTAATTTGATACTAGTAAG+TGG | - | chr8_3:22473440-22473459 | Msa1282230:CDS | 25.0% |
| ! | ACAGTAGGTTGTTAAAATAT+AGG | - | chr8_3:22473482-22473501 | Msa1282230:CDS | 25.0% |
| ! | CAGTAGGTTGTTAAAATATA+GGG | - | chr8_3:22473483-22473502 | Msa1282230:CDS | 25.0% |
| ! | AGTAGGTTGTTAAAATATAG+GGG | - | chr8_3:22473484-22473503 | Msa1282230:CDS | 25.0% |
| !!! | TTAAAAGTGTCTAATTAAGG+CGG | - | chr8_3:22473602-22473621 | Msa1282230:intron | 25.0% |
| !! | ATGTTTTCATTGATGAAGTT+TGG | - | chr8_3:22473890-22473909 | Msa1282230:intron | 25.0% |
| ! | AAAATAAATGTGACGAAATG+AGG | + | chr8_3:22473938-22473957 | None:intergenic | 25.0% |
| ! | TGCAAAAGTGACAATTATAA+GGG | + | chr8_3:22474076-22474095 | None:intergenic | 25.0% |
| ! | ATGCAAAAGTGACAATTATA+AGG | + | chr8_3:22474077-22474096 | None:intergenic | 25.0% |
| !! | GTTCAAAGTATCATTAAATG+TGG | - | chr8_3:22474132-22474151 | Msa1282230:CDS | 25.0% |
| ! | TCTCTGCAATAAATATATAG+GGG | + | chr8_3:22474172-22474191 | None:intergenic | 25.0% |
| ! | CTCTCTGCAATAAATATATA+GGG | + | chr8_3:22474173-22474192 | None:intergenic | 25.0% |
| ! | TCTCTCTGCAATAAATATAT+AGG | + | chr8_3:22474174-22474193 | None:intergenic | 25.0% |
| !!! | AGTAAAAGTATTTGTTGTCT+TGG | - | chr8_3:22474265-22474284 | Msa1282230:CDS | 25.0% |
| !! | CTTCATACATTTTACCAAAT+CGG | - | chr8_3:22474397-22474416 | Msa1282230:CDS | 25.0% |
| ! | GTAGCTACAATAATATGTAA+TGG | + | chr8_3:22474629-22474648 | None:intergenic | 25.0% |
| ! | AAGTTGTTACCTAAACATTA+GGG | + | chr8_3:22474651-22474670 | None:intergenic | 25.0% |
| ! | AAAGTTGTTACCTAAACATT+AGG | + | chr8_3:22474652-22474671 | None:intergenic | 25.0% |
| ! | TAGAGAATTTACATAACAAC+AGG | + | chr8_3:22474867-22474886 | None:intergenic | 25.0% |
| !!! | GGTTATGTGTTGTTTTCTTT+AGG | + | chr8_3:22470522-22470541 | None:intergenic | 30.0% |
| ! | TTCATTTTGCAACAAGGTTT+TGG | + | chr8_3:22470641-22470660 | None:intergenic | 30.0% |
| ! | AACATGTTCATTTTGCAACA+AGG | + | chr8_3:22470647-22470666 | None:intergenic | 30.0% |
| TGTTGCAAAATGAACATGTT+AGG | - | chr8_3:22470647-22470666 | Msa1282230:intron | 30.0% | |
| !!! | ATGAAATGGTTTGGTTTTGT+TGG | + | chr8_3:22470721-22470740 | None:intergenic | 30.0% |
| TATGATCTGATGAAATGGTT+TGG | + | chr8_3:22470730-22470749 | None:intergenic | 30.0% | |
| TGGATTATGATCTGATGAAA+TGG | + | chr8_3:22470735-22470754 | None:intergenic | 30.0% | |
| ! | TTCATCATCATTACTTGTTG+TGG | + | chr8_3:22470908-22470927 | None:intergenic | 30.0% |
| !! | GAAACAAAAACTTGATGATG+GGG | - | chr8_3:22470969-22470988 | Msa1282230:intron | 30.0% |
| TGAAGAAAATGGTGAGTTTA+GGG | - | chr8_3:22470994-22471013 | Msa1282230:intron | 30.0% | |
| ATTGTAGCTATAAAAGATGC+AGG | - | chr8_3:22471050-22471069 | Msa1282230:intron | 30.0% | |
| !! | AACAAAAAGTGAAAGTACCT+TGG | + | chr8_3:22471333-22471352 | None:intergenic | 30.0% |
| CGGATAATGATTTACAGAAA+TGG | - | chr8_3:22471460-22471479 | Msa1282230:intron | 30.0% | |
| ATCAATCAATTTAGTCTCAG+AGG | + | chr8_3:22471559-22471578 | None:intergenic | 30.0% | |
| !! | TGAAATGGCTCAGTTATTTT+TGG | + | chr8_3:22472297-22472316 | None:intergenic | 30.0% |
| AGAAAAATAGAGTCAAAGCA+TGG | + | chr8_3:22472410-22472429 | None:intergenic | 30.0% | |
| TCAACTAGGTCAAGTAATAT+GGG | - | chr8_3:22472579-22472598 | Msa1282230:intron | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | + | chr8_3:22472662-22472681 | None:intergenic | 30.0% | |
| TGAATCCAAAAAATGCAACA+AGG | + | chr8_3:22473051-22473070 | None:intergenic | 30.0% | |
| ATGTCACCTTCAATCAAAAA+AGG | - | chr8_3:22473155-22473174 | Msa1282230:intron | 30.0% | |
| !!! | AGTTGTCCTTTTTTGATTGA+AGG | + | chr8_3:22473164-22473183 | None:intergenic | 30.0% |
| AGTCATTGAAAGAATATGCT+AGG | - | chr8_3:22473416-22473435 | Msa1282230:CDS | 30.0% | |
| TACTAGTAAGTGGATAAACT+CGG | - | chr8_3:22473450-22473469 | Msa1282230:CDS | 30.0% | |
| TGCATACTTGTGTCAATTTA+TGG | - | chr8_3:22473656-22473675 | Msa1282230:intron | 30.0% | |
| ! | ATAGAAAACTTCCTTTGGAA+GGG | + | chr8_3:22473698-22473717 | None:intergenic | 30.0% |
| GTAACATAGAAAACTTCCTT+TGG | + | chr8_3:22473703-22473722 | None:intergenic | 30.0% | |
| TGAAAATGTCCTAGTTTCTA+AGG | + | chr8_3:22473975-22473994 | None:intergenic | 30.0% | |
| TATTGAGCTATAGCAATGAA+TGG | + | chr8_3:22474039-22474058 | None:intergenic | 30.0% | |
| AAGTGACAATTATAAGGGAA+CGG | + | chr8_3:22474071-22474090 | None:intergenic | 30.0% | |
| TGACAATTAAAAAGGAACAG+AGG | - | chr8_3:22474309-22474328 | Msa1282230:CDS | 30.0% | |
| GACAATTAAAAAGGAACAGA+GGG | - | chr8_3:22474310-22474329 | Msa1282230:CDS | 30.0% | |
| TAACTAGCAACATGACTATT+TGG | - | chr8_3:22474335-22474354 | Msa1282230:CDS | 30.0% | |
| !! | AATATGTAATGGGCAAAAAG+TGG | + | chr8_3:22474618-22474637 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTCTTCTGATGGC+AGG | - | chr8_3:22474803-22474822 | Msa1282230:five_prime_UTR | 30.0% |
| GAACTTAGATATCGATGTTA+CGG | - | chr8_3:22474930-22474949 | Msa1282230:five_prime_UTR | 30.0% | |
| AACTTAGATATCGATGTTAC+GGG | - | chr8_3:22474931-22474950 | Msa1282230:five_prime_UTR | 30.0% | |
| !!! | AGAGAGATTTTGGAACAGAA+AGG | + | chr8_3:22470474-22470493 | None:intergenic | 35.0% |
| TGTAATGTAAAGAGAGGATG+AGG | + | chr8_3:22470590-22470609 | None:intergenic | 35.0% | |
| GGAGAATGTAATGTAAAGAG+AGG | + | chr8_3:22470596-22470615 | None:intergenic | 35.0% | |
| !!! | TTGCAACAAGGTTTTGGTTT+TGG | + | chr8_3:22470635-22470654 | None:intergenic | 35.0% |
| CTATTAGAACCAAGTCTCTT+AGG | + | chr8_3:22470673-22470692 | None:intergenic | 35.0% | |
| !!! | TGTTAGGGTTTTGATGATGA+GGG | + | chr8_3:22470829-22470848 | None:intergenic | 35.0% |
| !!! | TTGTTAGGGTTTTGATGATG+AGG | + | chr8_3:22470830-22470849 | None:intergenic | 35.0% |
| ! | TTCATCAAGACTCGAGTTTT+TGG | - | chr8_3:22470864-22470883 | Msa1282230:intron | 35.0% |
| !! | TCATCATTACTTGTTGTGGT+TGG | + | chr8_3:22470904-22470923 | None:intergenic | 35.0% |
| GTGAAGAAAATGGTGAGTTT+AGG | - | chr8_3:22470993-22471012 | Msa1282230:intron | 35.0% | |
| ! | TTTAGGGTTTGTCAAGATTG+TGG | - | chr8_3:22471010-22471029 | Msa1282230:intron | 35.0% |
| AATCAAAATTCTCTGCCTCT+TGG | + | chr8_3:22471209-22471228 | None:intergenic | 35.0% | |
| TCATCATCACAGAATAATGC+TGG | - | chr8_3:22471229-22471248 | Msa1282230:intron | 35.0% | |
| GCTTAAACTTCTTGTTCTAG+TGG | + | chr8_3:22471287-22471306 | None:intergenic | 35.0% | |
| CTGTAAATCATTATCCGTGT+CGG | + | chr8_3:22471457-22471476 | None:intergenic | 35.0% | |
| GCATAATCCAGTGTAATCAT+AGG | - | chr8_3:22471482-22471501 | Msa1282230:intron | 35.0% | |
| TGGTTAATAGAAAAATGCCC+CGG | - | chr8_3:22471753-22471772 | Msa1282230:intron | 35.0% | |
| ! | TGAAGATGAACTTGCTTACT+TGG | - | chr8_3:22471952-22471971 | Msa1282230:intron | 35.0% |
| TTGGCTACTGTGAATATTAG+TGG | - | chr8_3:22471971-22471990 | Msa1282230:intron | 35.0% | |
| ATTAGTGGCCATGTATTCAA+AGG | - | chr8_3:22471986-22472005 | Msa1282230:intron | 35.0% | |
| TTAGTGGCCATGTATTCAAA+GGG | - | chr8_3:22471987-22472006 | Msa1282230:intron | 35.0% | |
| AGAGAAACCCTTTGAATACA+TGG | + | chr8_3:22471997-22472016 | None:intergenic | 35.0% | |
| AAAGGGTTTCTCTATGATCA+AGG | - | chr8_3:22472004-22472023 | Msa1282230:intron | 35.0% | |
| !! | AGTTGCAATTCTGAAACACA+AGG | + | chr8_3:22472055-22472074 | None:intergenic | 35.0% |
| TGTGTTTCAGAATTGCAACT+TGG | - | chr8_3:22472055-22472074 | Msa1282230:intron | 35.0% | |
| GAATTGCAACTTGGAAGTAA+TGG | - | chr8_3:22472064-22472083 | Msa1282230:intron | 35.0% | |
| ! | TGCTTGTTGAGATTGCTTTA+AGG | - | chr8_3:22472156-22472175 | Msa1282230:intron | 35.0% |
| AGAAAATGGGTCAGATATTC+CGG | + | chr8_3:22472262-22472281 | None:intergenic | 35.0% | |
| ATAGGTCAAGTAATATGGGA+CGG | + | chr8_3:22472362-22472381 | None:intergenic | 35.0% | |
| GTCAACTAGGTCAAGTAATA+TGG | - | chr8_3:22472578-22472597 | Msa1282230:intron | 35.0% | |
| ATCTGTGTGAAAAACCAAAC+TGG | - | chr8_3:22472691-22472710 | Msa1282230:intron | 35.0% | |
| ACCATTTGTACGACAATTTC+TGG | - | chr8_3:22472835-22472854 | Msa1282230:intron | 35.0% | |
| CCATTTGTACGACAATTTCT+GGG | - | chr8_3:22472836-22472855 | Msa1282230:intron | 35.0% | |
| !!! | TGACACCTTGTTGCATTTTT+TGG | - | chr8_3:22473043-22473062 | Msa1282230:intron | 35.0% |
| AATCTGATTCAGCAAGAGTT+CGG | - | chr8_3:22473273-22473292 | Msa1282230:intron | 35.0% | |
| ACTAGTAAGTGGATAAACTC+GGG | - | chr8_3:22473451-22473470 | Msa1282230:CDS | 35.0% | |
| TAAGGCGGAGACTAATTTAA+TGG | - | chr8_3:22473617-22473636 | Msa1282230:intron | 35.0% | |
| ! | TTTTTGTTAACCCCTTCCAA+AGG | - | chr8_3:22473684-22473703 | Msa1282230:intron | 35.0% |
| ! | TAGAAAACTTCCTTTGGAAG+GGG | + | chr8_3:22473697-22473716 | None:intergenic | 35.0% |
| CATAGAAAACTTCCTTTGGA+AGG | + | chr8_3:22473699-22473718 | None:intergenic | 35.0% | |
| CAACATGACTATTTGGCATT+TGG | - | chr8_3:22474342-22474361 | Msa1282230:CDS | 35.0% | |
| TCCAATGACCATATTTGTCT+TGG | - | chr8_3:22474558-22474577 | Msa1282230:CDS | 35.0% | |
| TCCAAGACAAATATGGTCAT+TGG | + | chr8_3:22474562-22474581 | None:intergenic | 35.0% | |
| AGACTCATCCAAGACAAATA+TGG | + | chr8_3:22474569-22474588 | None:intergenic | 35.0% | |
| AAATTGACCGGAGAAAATCA+TGG | - | chr8_3:22474591-22474610 | Msa1282230:CDS | 35.0% | |
| TTGTAGCTACCCTAATGTTT+AGG | - | chr8_3:22474639-22474658 | Msa1282230:CDS | 35.0% | |
| ! | TACATAACAACAGGTACTGT+AGG | + | chr8_3:22474858-22474877 | None:intergenic | 35.0% |
| ATGTGTGCGTGATTGTGATT+TGG | + | chr8_3:22470543-22470562 | None:intergenic | 40.0% | |
| GTAAAGAGAGGATGAGGTTA+AGG | + | chr8_3:22470584-22470603 | None:intergenic | 40.0% | |
| ! | TGTTGGTTGTGAAGTGATGA+AGG | + | chr8_3:22470704-22470723 | None:intergenic | 40.0% |
| GATGAAGGTAAGGGAAGATT+TGG | + | chr8_3:22470755-22470774 | None:intergenic | 40.0% | |
| !! | AGTGCTGATGATGAAGGTAA+GGG | + | chr8_3:22470764-22470783 | None:intergenic | 40.0% |
| !! | TAGTGCTGATGATGAAGGTA+AGG | + | chr8_3:22470765-22470784 | None:intergenic | 40.0% |
| !! | ACACTTAGTGCTGATGATGA+AGG | + | chr8_3:22470770-22470789 | None:intergenic | 40.0% |
| TCATCATCAGCACTAAGTGT+TGG | - | chr8_3:22470770-22470789 | Msa1282230:intron | 40.0% | |
| ! | ATGATGGGGTGTGAAGAAAA+TGG | - | chr8_3:22470983-22471002 | Msa1282230:intron | 40.0% |
| !! | AGATGCAGGACTTGTTGTAA+AGG | - | chr8_3:22471064-22471083 | Msa1282230:intron | 40.0% |
| ! | ATAACTAGCTCTTGTCACCA+AGG | - | chr8_3:22471313-22471332 | Msa1282230:intron | 40.0% |
| ! | TGTAATCATAGGTGTCGTGT+CGG | - | chr8_3:22471493-22471512 | Msa1282230:intron | 40.0% |
| TTAATAGAAAAATGCCCCGG+AGG | - | chr8_3:22471756-22471775 | Msa1282230:intron | 40.0% | |
| TGTTTGTGAATTGCAGATCC+TGG | - | chr8_3:22471851-22471870 | Msa1282230:intron | 40.0% | |
| ! | CAACTTGGAAGTAATGGAAG+TGG | - | chr8_3:22472070-22472089 | Msa1282230:intron | 40.0% |
| ATGTTCTTCCTCTGCAATTG+AGG | - | chr8_3:22472108-22472127 | Msa1282230:intron | 40.0% | |
| AATCTCAACAAGCAGAAGCA+GGG | + | chr8_3:22472150-22472169 | None:intergenic | 40.0% | |
| GAAAATGGGTCAGATATTCC+GGG | + | chr8_3:22472261-22472280 | None:intergenic | 40.0% | |
| CTAGGTCAAGTAATATGGGA+CGG | - | chr8_3:22472583-22472602 | Msa1282230:intron | 40.0% | |
| ! | CCAAACTGGCTCAGATAAAA+CGG | - | chr8_3:22472705-22472724 | Msa1282230:intron | 40.0% |
| ! | CAAACTGGCTCAGATAAAAC+GGG | - | chr8_3:22472706-22472725 | Msa1282230:intron | 40.0% |
| CCCAGAAATTGTCGTACAAA+TGG | + | chr8_3:22472839-22472858 | None:intergenic | 40.0% | |
| !! | CTAACACAGTTGATGATGTG+TGG | + | chr8_3:22473244-22473263 | None:intergenic | 40.0% |
| CACATCATCAACTGTGTTAG+AGG | - | chr8_3:22473244-22473263 | Msa1282230:intron | 40.0% | |
| ACTCGGGTCAAATTAACAGT+AGG | - | chr8_3:22473467-22473486 | Msa1282230:CDS | 40.0% | |
| ! | CCTAGTTTCTAAGGAAAGAG+TGG | + | chr8_3:22473966-22473985 | None:intergenic | 40.0% |
| CCACTCTTTCCTTAGAAACT+AGG | - | chr8_3:22473963-22473982 | Msa1282230:intron | 40.0% | |
| GACAATTATAAGGGAACGGA+GGG | + | chr8_3:22474067-22474086 | None:intergenic | 40.0% | |
| TGACAATTATAAGGGAACGG+AGG | + | chr8_3:22474068-22474087 | None:intergenic | 40.0% | |
| TATGTCAACAACTGACTGCA+GGG | + | chr8_3:22474426-22474445 | None:intergenic | 40.0% | |
| ATATGTCAACAACTGACTGC+AGG | + | chr8_3:22474427-22474446 | None:intergenic | 40.0% | |
| TTCAACGATCACGACTATCT+TGG | + | chr8_3:22474458-22474477 | None:intergenic | 40.0% | |
| GGATGAGTCTGAAAATTGAC+CGG | - | chr8_3:22474579-22474598 | Msa1282230:CDS | 40.0% | |
| ! | AAGTGGACCATGATTTTCTC+CGG | + | chr8_3:22474601-22474620 | None:intergenic | 40.0% |
| GTAGGATTTCCATGCATAAC+CGG | + | chr8_3:22474840-22474859 | None:intergenic | 40.0% | |
| CATGTTAGGCCTAAGAGACT+TGG | - | chr8_3:22470661-22470680 | Msa1282230:intron | 45.0% | |
| !! | TCAGCACTAAGTGTTGGTCT+TGG | - | chr8_3:22470776-22470795 | Msa1282230:intron | 45.0% |
| !! | TTGATGATGAGGGTGAGTAG+TGG | + | chr8_3:22470819-22470838 | None:intergenic | 45.0% |
| !! | AGGACTTGTTGTAAAGGTCG+TGG | - | chr8_3:22471070-22471089 | Msa1282230:intron | 45.0% |
| TGTCCGTGTTTCATAGGTCT+CGG | + | chr8_3:22471408-22471427 | None:intergenic | 45.0% | |
| CACGACACCTATGATTACAC+TGG | + | chr8_3:22471492-22471511 | None:intergenic | 45.0% | |
| !! | ATTTAGTCTCAGAGGTGTCC+TGG | + | chr8_3:22471551-22471570 | None:intergenic | 45.0% |
| GTCAGAGAGGTAGACACAAT+TGG | - | chr8_3:22471793-22471812 | Msa1282230:intron | 45.0% | |
| CTATGGCACTTGAAAACAGC+AGG | + | chr8_3:22471911-22471930 | None:intergenic | 45.0% | |
| ! | TGCCATAGAGTATCTGCTGT+TGG | - | chr8_3:22471923-22471942 | Msa1282230:intron | 45.0% |
| TGCCAACAGCAGATACTCTA+TGG | + | chr8_3:22471928-22471947 | None:intergenic | 45.0% | |
| ! | AGAGTATCTGCTGTTGGCAA+TGG | - | chr8_3:22471929-22471948 | Msa1282230:intron | 45.0% |
| AGTTGGAACCTCAATTGCAG+AGG | + | chr8_3:22472119-22472138 | None:intergenic | 45.0% | |
| CAATCTCAACAAGCAGAAGC+AGG | + | chr8_3:22472151-22472170 | None:intergenic | 45.0% | |
| !! | GACGGAGGGAGTATTGTATT+GGG | + | chr8_3:22472344-22472363 | None:intergenic | 45.0% |
| GTCAAGTAATATGGGACGGA+GGG | + | chr8_3:22472587-22472606 | None:intergenic | 45.0% | |
| CATACGTGACAGAGTCAACT+AGG | - | chr8_3:22472565-22472584 | Msa1282230:intron | 45.0% | |
| GTCAAGTAATATGGGACGGA+GGG | - | chr8_3:22472587-22472606 | Msa1282230:intron | 45.0% | |
| ! | CCGTTTTATCTGAGCCAGTT+TGG | + | chr8_3:22472708-22472727 | None:intergenic | 45.0% |
| ATGGCAGGTAGTTCTTTCTC+CGG | - | chr8_3:22474818-22474837 | Msa1282230:five_prime_UTR | 45.0% | |
| GTTCTTTCTCCGGTTATGCA+TGG | - | chr8_3:22474828-22474847 | Msa1282230:five_prime_UTR | 45.0% | |
| !!! | AAAATAAAATTGTATTTTTA+CGG | - | chr8_3:22472745-22472764 | Msa1282230:intron | 5.0% |
| GGTGAGTAGTGGTTAGGAGT+GGG | + | chr8_3:22470808-22470827 | None:intergenic | 50.0% | |
| GATGAGGGTGAGTAGTGGTT+AGG | + | chr8_3:22470814-22470833 | None:intergenic | 50.0% | |
| GTTGTGGTTGGCACATCTTG+AGG | + | chr8_3:22470892-22470911 | None:intergenic | 50.0% | |
| CTTCAGCCACCATCATACTC+CGG | + | chr8_3:22471153-22471172 | None:intergenic | 50.0% | |
| !! | AGTATGATGGTGGCTGAAGG+TGG | - | chr8_3:22471154-22471173 | Msa1282230:intron | 50.0% |
| !! | AGTGATGGTGGTGCTTCTTC+TGG | - | chr8_3:22471181-22471200 | Msa1282230:intron | 50.0% |
| GTGCTTCTTCTGGTACCAAG+AGG | - | chr8_3:22471191-22471210 | Msa1282230:intron | 50.0% | |
| TGGCCGAGACCTATGAAACA+CGG | - | chr8_3:22471402-22471421 | Msa1282230:intron | 50.0% | |
| GTCTGGTGTCCGTGTTTCAT+AGG | + | chr8_3:22471414-22471433 | None:intergenic | 50.0% | |
| CGAACACGAACATACCGACA+CGG | - | chr8_3:22471440-22471459 | Msa1282230:intron | 50.0% | |
| ! | CATAGGTGTCGTGTCGGTAT+CGG | - | chr8_3:22471499-22471518 | Msa1282230:intron | 50.0% |
| GGCAAAGTCTGCTTGAAACC+AGG | + | chr8_3:22471872-22471891 | None:intergenic | 50.0% | |
| GAAGCAGGGTAAGCACTAGT+TGG | + | chr8_3:22472136-22472155 | None:intergenic | 50.0% | |
| ATGGGTCAGATATTCCGGGA+CGG | + | chr8_3:22472257-22472276 | None:intergenic | 50.0% | |
| !! | GGACGGAGGGAGTATTGTAT+TGG | + | chr8_3:22472345-22472364 | None:intergenic | 50.0% |
| GGTCAAGTAATATGGGACGG+AGG | + | chr8_3:22472586-22472605 | None:intergenic | 50.0% | |
| GGTCAAGTAATATGGGACGG+AGG | - | chr8_3:22472586-22472605 | Msa1282230:intron | 50.0% | |
| CTGGCTCAGATAAAACGGGA+CGG | - | chr8_3:22472710-22472729 | Msa1282230:intron | 50.0% | |
| CTCAGATAAAACGGGACGGA+GGG | - | chr8_3:22472714-22472733 | Msa1282230:intron | 50.0% | |
| TGACTGCAGGGAATCCGATT+TGG | + | chr8_3:22474414-22474433 | None:intergenic | 50.0% | |
| GGGTGAGTAGTGGTTAGGAG+TGG | + | chr8_3:22470809-22470828 | None:intergenic | 55.0% | |
| ! | GTACTCACGTGAAGAGCACG+TGG | - | chr8_3:22471104-22471123 | Msa1282230:intron | 55.0% |
| ! | CGTGAAGAGCACGTGGATAC+CGG | - | chr8_3:22471111-22471130 | Msa1282230:intron | 55.0% |
| !! | CGGAGTATGATGGTGGCTGA+AGG | - | chr8_3:22471151-22471170 | Msa1282230:intron | 55.0% |
| GCTGAAGGTGGTGACAGTGA+TGG | - | chr8_3:22471166-22471185 | Msa1282230:intron | 55.0% | |
| GAAGGTGGTGACAGTGATGG+TGG | - | chr8_3:22471169-22471188 | Msa1282230:intron | 55.0% | |
| GTTCGTGTTCGTGTCGTGTC+TGG | + | chr8_3:22471431-22471450 | None:intergenic | 55.0% | |
| !! | TGTCGTGTCGGTATCGGTGT+TGG | - | chr8_3:22471505-22471524 | Msa1282230:intron | 55.0% |
| !! | TCTCAGAGGTGTCCTGGTGT+CGG | + | chr8_3:22471545-22471564 | None:intergenic | 55.0% |
| AGAAAAATGCCCCGGAGGCA+TGG | - | chr8_3:22471761-22471780 | Msa1282230:intron | 55.0% | |
| ATGGTCGTCACTCGTCAGAG+AGG | - | chr8_3:22471780-22471799 | Msa1282230:intron | 55.0% | |
| GTCAGATATTCCGGGACGGA+GGG | + | chr8_3:22472253-22472272 | None:intergenic | 55.0% | |
| GCTCAGATAAAACGGGACGG+AGG | - | chr8_3:22472713-22472732 | Msa1282230:intron | 55.0% | |
| ATCGACGTGTGTCCGACACC+AGG | - | chr8_3:22471530-22471549 | Msa1282230:intron | 60.0% | |
| ACGAGTGACGACCATGCCTC+CGG | + | chr8_3:22471775-22471794 | None:intergenic | 60.0% | |
| GTTTGGTACTCCCTCCGTCC+CGG | - | chr8_3:22472240-22472259 | Msa1282230:intron | 60.0% | |
| GGTCAGATATTCCGGGACGG+AGG | + | chr8_3:22472254-22472273 | None:intergenic | 60.0% | |
| !! | CGTGGATACCGGCGTCGATG+AGG | - | chr8_3:22471122-22471141 | Msa1282230:intron | 65.0% |
| !! | GGATACCGGCGTCGATGAGG+CGG | - | chr8_3:22471125-22471144 | Msa1282230:intron | 65.0% |
| !! | GATACCGGCGTCGATGAGGC+GGG | - | chr8_3:22471126-22471145 | Msa1282230:intron | 65.0% |
| GAGGCGGGACCGGAGTATGA+TGG | - | chr8_3:22471141-22471160 | Msa1282230:intron | 65.0% | |
| GCGGGACCGGAGTATGATGG+TGG | - | chr8_3:22471144-22471163 | Msa1282230:intron | 65.0% | |
| GAGTGACGACCATGCCTCCG+GGG | + | chr8_3:22471773-22471792 | None:intergenic | 65.0% | |
| CGAGTGACGACCATGCCTCC+GGG | + | chr8_3:22471774-22471793 | None:intergenic | 65.0% | |
| GCAGGCGCGCGAACATAGCG+AGG | + | chr8_3:22471893-22471912 | None:intergenic | 70.0% | |
| CGGTCCCGCCTCATCGACGC+CGG | + | chr8_3:22471133-22471152 | None:intergenic | 75.0% | |
| !! | CGGCGTCGATGAGGCGGGAC+CGG | - | chr8_3:22471131-22471150 | Msa1282230:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 22470469 | 22474982 | 22470469 | ID=Msa1282230;Name=Msa1282230 |
| chr8_3 | mRNA | 22470469 | 22474982 | 22470469 | ID=Msa1282230-mRNA-1;Parent=Msa1282230;Name=Msa1282230-mRNA-1;_AED=0.00;_eAED=0.00;_QI=187|1|1|1|0.5|0.33|3|170|325 |
| chr8_3 | exon | 22470469 | 22470626 | 22470469 | ID=Msa1282230-mRNA-1:exon:8026;Parent=Msa1282230-mRNA-1 |
| chr8_3 | exon | 22473274 | 22473584 | 22473274 | ID=Msa1282230-mRNA-1:exon:8025;Parent=Msa1282230-mRNA-1 |
| chr8_3 | exon | 22474117 | 22474982 | 22474117 | ID=Msa1282230-mRNA-1:exon:8024;Parent=Msa1282230-mRNA-1 |
| chr8_3 | five_prime_UTR | 22474796 | 22474982 | 22474796 | ID=Msa1282230-mRNA-1:five_prime_utr;Parent=Msa1282230-mRNA-1 |
| chr8_3 | CDS | 22474117 | 22474795 | 22474117 | ID=Msa1282230-mRNA-1:cds;Parent=Msa1282230-mRNA-1 |
| chr8_3 | CDS | 22473286 | 22473584 | 22473286 | ID=Msa1282230-mRNA-1:cds;Parent=Msa1282230-mRNA-1 |
| chr8_3 | three_prime_UTR | 22473274 | 22473285 | 22473274 | ID=Msa1282230-mRNA-1:three_prime_utr;Parent=Msa1282230-mRNA-1 |
| chr8_3 | three_prime_UTR | 22470469 | 22470626 | 22470469 | ID=Msa1282230-mRNA-1:three_prime_utr;Parent=Msa1282230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
