Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1283020 | sp|Q9SZL8|FRS5_ARATH | 27.660 | 470 | 317 | 6 | 32 | 499 | 70 | 518 | 2.36e-55 | 206 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1283020 | D3YBB9 | 67.410 | 807 | 192 | 7 | 1 | 744 | 49 | 847 | 0.0 | 1088 |
Gene ID | Type | Classification |
---|---|---|
Msa1283020 | TF | FAR1 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1283020 | MtrunA17_Chr2g0324011 | 31.809 | 503 | 312 | 9 | 36 | 532 | 8 | 485 | 1.41e-87 | 287 |
Msa1283020 | MtrunA17_Chr3g0082121 | 30.594 | 657 | 382 | 17 | 41 | 673 | 49 | 655 | 2.63e-84 | 281 |
Msa1283020 | MtrunA17_Chr3g0088371 | 82.313 | 147 | 23 | 1 | 601 | 744 | 38 | 184 | 6.47e-77 | 246 |
Msa1283020 | MtrunA17_Chr1g0202341 | 31.849 | 449 | 276 | 8 | 34 | 478 | 50 | 472 | 2.85e-66 | 232 |
Msa1283020 | MtrunA17_Chr8g0363841 | 29.899 | 495 | 317 | 9 | 40 | 530 | 22 | 490 | 3.58e-64 | 226 |
Msa1283020 | MtrunA17_Chr1g0164591 | 35.000 | 320 | 193 | 4 | 131 | 448 | 1 | 307 | 2.12e-62 | 212 |
Msa1283020 | MtrunA17_Chr2g0296781 | 30.388 | 464 | 290 | 9 | 39 | 499 | 1 | 434 | 4.72e-59 | 213 |
Msa1283020 | MtrunA17_Chr1g0203721 | 25.145 | 692 | 438 | 18 | 40 | 698 | 68 | 712 | 6.16e-58 | 212 |
Msa1283020 | MtrunA17_Chr1g0172971 | 82.051 | 117 | 20 | 1 | 1 | 116 | 1 | 117 | 1.50e-55 | 199 |
Msa1283020 | MtrunA17_Chr5g0448761 | 27.689 | 502 | 331 | 10 | 31 | 524 | 56 | 533 | 7.82e-54 | 199 |
Msa1283020 | MtrunA17_Chr2g0287651 | 28.000 | 500 | 319 | 12 | 9 | 499 | 48 | 515 | 2.94e-53 | 198 |
Msa1283020 | MtrunA17_Chr6g0477261 | 33.333 | 321 | 209 | 3 | 180 | 499 | 7 | 323 | 5.48e-53 | 194 |
Msa1283020 | MtrunA17_Chr6g0458391 | 26.606 | 545 | 338 | 13 | 41 | 575 | 231 | 723 | 1.77e-52 | 194 |
Msa1283020 | MtrunA17_Chr7g0258861 | 34.641 | 306 | 176 | 6 | 36 | 336 | 8 | 294 | 5.52e-51 | 180 |
Msa1283020 | MtrunA17_Chr5g0441581 | 26.614 | 511 | 319 | 12 | 32 | 530 | 26 | 492 | 2.35e-48 | 182 |
Msa1283020 | MtrunA17_Chr1g0198761 | 27.829 | 539 | 329 | 16 | 26 | 540 | 38 | 540 | 4.66e-46 | 176 |
Msa1283020 | MtrunA17_Chr1g0196541 | 27.586 | 464 | 303 | 12 | 39 | 499 | 1 | 434 | 1.22e-45 | 174 |
Msa1283020 | MtrunA17_Chr1g0203051 | 23.107 | 515 | 366 | 6 | 50 | 562 | 94 | 580 | 1.41e-44 | 170 |
Msa1283020 | MtrunA17_Chr5g0440451 | 23.494 | 664 | 435 | 15 | 34 | 667 | 42 | 662 | 9.93e-44 | 170 |
Msa1283020 | MtrunA17_Chr2g0329031 | 26.042 | 480 | 312 | 11 | 23 | 496 | 2 | 444 | 5.12e-42 | 164 |
Msa1283020 | MtrunA17_Chr2g0276841 | 26.575 | 508 | 316 | 13 | 49 | 536 | 84 | 554 | 7.41e-42 | 162 |
Msa1283020 | MtrunA17_Chr2g0291591 | 25.749 | 501 | 312 | 13 | 16 | 499 | 44 | 501 | 2.33e-41 | 159 |
Msa1283020 | MtrunA17_Chr5g0431001 | 27.716 | 451 | 281 | 12 | 40 | 473 | 66 | 488 | 4.03e-41 | 157 |
Msa1283020 | MtrunA17_Chr3g0118611 | 27.669 | 459 | 306 | 10 | 221 | 665 | 111 | 557 | 8.89e-41 | 160 |
Msa1283020 | MtrunA17_Chr2g0290391 | 25.981 | 535 | 342 | 15 | 38 | 553 | 54 | 553 | 9.83e-41 | 159 |
Msa1283020 | MtrunA17_Chr6g0475591 | 91.781 | 73 | 6 | 0 | 188 | 260 | 1 | 73 | 1.13e-40 | 143 |
Msa1283020 | MtrunA17_Chr1g0207551 | 23.867 | 662 | 426 | 16 | 31 | 664 | 30 | 641 | 4.84e-39 | 155 |
Msa1283020 | MtrunA17_Chr2g0294841 | 27.669 | 459 | 285 | 14 | 41 | 482 | 51 | 479 | 4.66e-35 | 142 |
Msa1283020 | MtrunA17_Chr2g0287061 | 24.950 | 501 | 302 | 15 | 41 | 536 | 189 | 620 | 2.03e-34 | 140 |
Msa1283020 | MtrunA17_Chr3g0080351 | 23.267 | 649 | 432 | 15 | 34 | 664 | 75 | 675 | 2.19e-34 | 140 |
Msa1283020 | MtrunA17_Chr5g0448511 | 27.097 | 310 | 218 | 4 | 216 | 523 | 1 | 304 | 2.68e-34 | 138 |
Msa1283020 | MtrunA17_Chr2g0291581 | 23.884 | 448 | 302 | 6 | 38 | 484 | 74 | 483 | 5.80e-34 | 139 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1283020 | AT4G38180.1 | 27.660 | 470 | 317 | 6 | 32 | 499 | 70 | 518 | 2.40e-56 | 206 |
Msa1283020 | AT4G15090.1 | 25.367 | 477 | 328 | 9 | 50 | 523 | 66 | 517 | 2.71e-40 | 159 |
Msa1283020 | AT4G15090.5 | 25.367 | 477 | 328 | 9 | 50 | 523 | 66 | 517 | 2.71e-40 | 159 |
Msa1283020 | AT4G15090.3 | 25.367 | 477 | 328 | 9 | 50 | 523 | 66 | 517 | 2.71e-40 | 159 |
Msa1283020 | AT4G15090.2 | 25.367 | 477 | 328 | 9 | 50 | 523 | 66 | 517 | 2.71e-40 | 159 |
Msa1283020 | AT4G15090.4 | 25.367 | 477 | 328 | 9 | 50 | 523 | 66 | 517 | 2.71e-40 | 159 |
Msa1283020 | AT3G06250.2 | 25.969 | 516 | 301 | 14 | 34 | 540 | 189 | 632 | 3.38e-40 | 159 |
Msa1283020 | AT3G06250.1 | 25.969 | 516 | 301 | 14 | 34 | 540 | 189 | 632 | 3.38e-40 | 159 |
Msa1283020 | AT3G06250.3 | 25.969 | 516 | 301 | 14 | 34 | 540 | 189 | 632 | 3.38e-40 | 159 |
Msa1283020 | AT2G27110.2 | 23.300 | 691 | 424 | 19 | 4 | 666 | 23 | 635 | 2.18e-38 | 154 |
Msa1283020 | AT2G27110.1 | 23.300 | 691 | 424 | 19 | 4 | 666 | 23 | 635 | 2.18e-38 | 154 |
Msa1283020 | AT1G76320.3 | 26.049 | 453 | 293 | 11 | 50 | 496 | 12 | 428 | 3.60e-38 | 152 |
Msa1283020 | AT2G27110.3 | 25.417 | 480 | 307 | 11 | 213 | 666 | 36 | 490 | 6.55e-38 | 151 |
Msa1283020 | AT1G76320.2 | 25.277 | 451 | 299 | 9 | 50 | 496 | 12 | 428 | 6.84e-38 | 151 |
Msa1283020 | AT1G76320.1 | 26.049 | 453 | 293 | 11 | 50 | 496 | 12 | 428 | 7.64e-38 | 151 |
Msa1283020 | AT1G76320.4 | 26.049 | 453 | 293 | 11 | 50 | 496 | 12 | 428 | 7.64e-38 | 151 |
Msa1283020 | AT1G10240.2 | 25.050 | 499 | 335 | 12 | 49 | 536 | 62 | 532 | 1.12e-37 | 150 |
Msa1283020 | AT1G10240.1 | 25.050 | 499 | 335 | 12 | 49 | 536 | 62 | 532 | 1.12e-37 | 150 |
Msa1283020 | AT4G38170.1 | 28.082 | 292 | 198 | 5 | 235 | 523 | 24 | 306 | 9.47e-37 | 146 |
Msa1283020 | AT5G28530.1 | 24.663 | 519 | 344 | 14 | 40 | 540 | 60 | 549 | 3.49e-36 | 145 |
Msa1283020 | AT5G28530.3 | 24.470 | 519 | 341 | 15 | 40 | 540 | 60 | 545 | 2.38e-35 | 143 |
Msa1283020 | AT5G28530.2 | 24.470 | 519 | 341 | 15 | 40 | 540 | 60 | 545 | 2.38e-35 | 143 |
Msa1283020 | AT5G18960.2 | 24.621 | 528 | 316 | 16 | 24 | 540 | 200 | 656 | 2.08e-34 | 141 |
Msa1283020 | AT5G18960.1 | 24.621 | 528 | 316 | 16 | 24 | 540 | 200 | 656 | 2.08e-34 | 141 |
Msa1283020 | AT3G22170.2 | 23.000 | 500 | 333 | 11 | 34 | 523 | 69 | 526 | 9.43e-34 | 139 |
Msa1283020 | AT3G22170.1 | 23.000 | 500 | 333 | 11 | 34 | 523 | 69 | 526 | 9.43e-34 | 139 |
Msa1283020 | AT1G80010.1 | 25.758 | 462 | 276 | 15 | 41 | 478 | 101 | 519 | 4.16e-31 | 130 |
Msa1283020 | AT2G32250.5 | 24.056 | 503 | 302 | 14 | 1 | 496 | 8 | 437 | 4.90e-30 | 127 |
Msa1283020 | AT2G32250.2 | 23.975 | 488 | 293 | 12 | 1 | 483 | 8 | 422 | 7.46e-30 | 127 |
Msa1283020 | AT2G32250.4 | 23.975 | 488 | 293 | 12 | 1 | 483 | 8 | 422 | 7.46e-30 | 127 |
Msa1283020 | AT2G32250.6 | 24.180 | 488 | 292 | 13 | 1 | 483 | 8 | 422 | 8.77e-30 | 126 |
Msa1283020 | AT2G32250.1 | 24.180 | 488 | 292 | 13 | 1 | 483 | 8 | 422 | 8.77e-30 | 126 |
Msa1283020 | AT2G32250.3 | 24.180 | 488 | 292 | 13 | 1 | 483 | 8 | 422 | 8.77e-30 | 126 |
Msa1283020 | AT2G32250.8 | 24.283 | 453 | 269 | 11 | 50 | 496 | 12 | 396 | 1.75e-29 | 125 |
Msa1283020 | AT2G32250.7 | 24.283 | 453 | 269 | 11 | 50 | 496 | 12 | 396 | 2.29e-29 | 125 |
Msa1283020 | AT1G52520.1 | 22.326 | 533 | 361 | 15 | 41 | 557 | 91 | 586 | 5.01e-28 | 120 |
Msa1283020 | AT4G19990.1 | 27.985 | 268 | 186 | 4 | 219 | 483 | 106 | 369 | 2.59e-26 | 115 |
Msa1283020 | AT4G19990.7 | 27.985 | 268 | 186 | 4 | 219 | 483 | 177 | 440 | 2.64e-26 | 115 |
Msa1283020 | AT4G19990.5 | 27.985 | 268 | 186 | 4 | 219 | 483 | 163 | 426 | 2.65e-26 | 115 |
Msa1283020 | AT4G19990.3 | 27.985 | 268 | 186 | 4 | 219 | 483 | 163 | 426 | 2.65e-26 | 115 |
Msa1283020 | AT4G19990.4 | 27.985 | 268 | 186 | 4 | 219 | 483 | 163 | 426 | 2.65e-26 | 115 |
Msa1283020 | AT4G19990.6 | 27.985 | 268 | 186 | 4 | 219 | 483 | 163 | 426 | 3.55e-26 | 115 |
Msa1283020 | AT4G19990.2 | 27.985 | 268 | 186 | 4 | 219 | 483 | 163 | 426 | 3.55e-26 | 115 |
Find 112 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 8_3:+24211962 | Msa1283020:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 8_3:-24213078 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 8_3:+24212229 | Msa1283020:CDS |
TACATTTCAGCTGCCTTTCT+TGG | 0.197151 | 8_3:+24211681 | Msa1283020:intron |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 8_3:+24211168 | Msa1283020:CDS |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 8_3:+24211714 | Msa1283020:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 8_3:-24211808 | None:intergenic |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 8_3:-24213072 | None:intergenic |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 8_3:+24212924 | Msa1283020:CDS |
ACCAGCCTGGTCTGTGTATA+TGG | 0.341000 | 8_3:-24211826 | None:intergenic |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 8_3:-24211218 | None:intergenic |
TTTGCTTCTTCCGAGCTATA+AGG | 0.345757 | 8_3:-24213140 | None:intergenic |
GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 8_3:+24212526 | Msa1283020:CDS |
GTCTTTAGTGCCAACATTCA+TGG | 0.367086 | 8_3:-24212800 | None:intergenic |
TACACGTGTTTGCGCAAATC+CGG | 0.370641 | 8_3:+24212876 | Msa1283020:CDS |
GAGGGATAATCATACTGATT+TGG | 0.375922 | 8_3:+24212262 | Msa1283020:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 8_3:+24212916 | Msa1283020:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 8_3:+24211225 | Msa1283020:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 8_3:+24211217 | Msa1283020:CDS |
TTTCAATTTATCATATCTAA+TGG | 0.390380 | 8_3:+24210305 | None:intergenic |
TCATACTGATTTGGACTTCA+AGG | 0.395582 | 8_3:+24212271 | Msa1283020:CDS |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 8_3:-24210688 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 8_3:+24213064 | Msa1283020:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 8_3:-24213054 | None:intergenic |
TTCCTTCAAATACTATTATG+AGG | 0.399583 | 8_3:+24212403 | Msa1283020:CDS |
GAGGAGTTTCTTCTTTCTAA+AGG | 0.401366 | 8_3:+24212949 | Msa1283020:CDS |
CCATGATTCTTTATCACTAA+AGG | 0.406174 | 8_3:-24210449 | None:intergenic |
TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 8_3:+24210459 | Msa1283020:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 8_3:-24212574 | None:intergenic |
ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 8_3:+24210530 | Msa1283020:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 8_3:-24212575 | None:intergenic |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 8_3:+24210865 | Msa1283020:CDS |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 8_3:+24210747 | Msa1283020:CDS |
TGAATGTCTATAAGATATAT+AGG | 0.445219 | 8_3:+24210779 | Msa1283020:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 8_3:-24211819 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 8_3:+24210730 | Msa1283020:CDS |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 8_3:+24210895 | Msa1283020:CDS |
TATGCATTGGTCTTCAGCTT+GGG | 0.450920 | 8_3:+24212103 | Msa1283020:CDS |
ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 8_3:+24210384 | Msa1283020:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 8_3:+24211893 | Msa1283020:CDS |
GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 8_3:+24212057 | Msa1283020:CDS |
AGAAATATTTCAGATGCCTC+CGG | 0.468885 | 8_3:-24212895 | None:intergenic |
CTAAAGTAGCGCAAATGCTC+TGG | 0.477802 | 8_3:-24210835 | None:intergenic |
GTATGCATTGGTCTTCAGCT+TGG | 0.479582 | 8_3:+24212102 | Msa1283020:CDS |
GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 8_3:+24210940 | Msa1283020:CDS |
CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 8_3:-24212405 | None:intergenic |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 8_3:-24210724 | None:intergenic |
TTTAATTATGCATATAACAC+TGG | 0.485542 | 8_3:+24210517 | Msa1283020:CDS |
CTGTCTGTGAACCATCTGTT+GGG | 0.487793 | 8_3:+24213025 | Msa1283020:CDS |
TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 8_3:+24211008 | Msa1283020:CDS |
TATGAGGAGGACACAACAAA+AGG | 0.490908 | 8_3:+24212419 | Msa1283020:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 8_3:-24211694 | None:intergenic |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 8_3:+24211021 | Msa1283020:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 8_3:+24212243 | Msa1283020:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 8_3:-24212323 | None:intergenic |
GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 8_3:+24210927 | Msa1283020:CDS |
ATTGGTCTTCAGCTTGGGTG+AGG | 0.501327 | 8_3:+24212108 | Msa1283020:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 8_3:-24211113 | None:intergenic |
GCTGTCTGTGAACCATCTGT+TGG | 0.504047 | 8_3:+24213024 | Msa1283020:CDS |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 8_3:+24212090 | Msa1283020:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 8_3:+24212588 | Msa1283020:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 8_3:-24210979 | None:intergenic |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 8_3:-24212568 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 8_3:-24212211 | None:intergenic |
TGTCTATAAGATATATAGGT+GGG | 0.523740 | 8_3:+24210783 | Msa1283020:CDS |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 8_3:+24212589 | Msa1283020:CDS |
CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 8_3:-24212400 | None:intergenic |
ACAAAATAAGAAATCAGATA+AGG | 0.530342 | 8_3:+24210579 | Msa1283020:CDS |
GACAGAAATTCCTTATAGCT+CGG | 0.533906 | 8_3:+24213130 | Msa1283020:CDS |
CTGAAATCTACCATGAATGT+TGG | 0.534154 | 8_3:+24212790 | Msa1283020:CDS |
TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 8_3:+24210624 | Msa1283020:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 8_3:-24212206 | None:intergenic |
TGTTATGCTTGTAACAAAGA+AGG | 0.541604 | 8_3:+24210613 | Msa1283020:CDS |
ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 8_3:+24212420 | Msa1283020:CDS |
CCTTTAGTGATAAAGAATCA+TGG | 0.543522 | 8_3:+24210449 | Msa1283020:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 8_3:+24210625 | Msa1283020:CDS |
AAATGCTCTGGTTTATGTAA+TGG | 0.552634 | 8_3:-24210823 | None:intergenic |
ACTTCAACAACGCACCAGCC+TGG | 0.557139 | 8_3:-24211839 | None:intergenic |
AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 8_3:+24211075 | Msa1283020:CDS |
TGAAAATTCAGTTATTGATG+CGG | 0.565546 | 8_3:+24210408 | Msa1283020:CDS |
TGAAGACTTAGAAGAAGTAA+CGG | 0.566856 | 8_3:-24212992 | None:intergenic |
GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 8_3:+24210943 | Msa1283020:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 8_3:-24212324 | None:intergenic |
TTGAAGAAAACCTTTCCCCA+AGG | 0.580876 | 8_3:+24212558 | Msa1283020:CDS |
TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 8_3:-24213036 | None:intergenic |
GAAGCAAAAGAAAGATGATG+AGG | 0.585686 | 8_3:+24213155 | Msa1283020:CDS |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 8_3:-24212345 | None:intergenic |
TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 8_3:+24210934 | Msa1283020:CDS |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 8_3:+24212917 | Msa1283020:CDS |
ACCATATACACAGACCAGGC+TGG | 0.590176 | 8_3:+24211825 | Msa1283020:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 8_3:+24212912 | Msa1283020:CDS |
GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 8_3:+24211014 | Msa1283020:CDS |
TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 8_3:-24212824 | None:intergenic |
AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 8_3:+24210928 | Msa1283020:CDS |
AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 8_3:+24211017 | Msa1283020:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 8_3:+24212321 | Msa1283020:CDS |
CTTCAAATACTATTATGAGG+AGG | 0.607664 | 8_3:+24212406 | Msa1283020:CDS |
ATATCAACTTCATCTGAGAG+TGG | 0.614980 | 8_3:+24210373 | Msa1283020:CDS |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 8_3:-24210673 | None:intergenic |
AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 8_3:-24212059 | None:intergenic |
GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 8_3:+24210948 | Msa1283020:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 8_3:-24212573 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 8_3:+24211894 | Msa1283020:CDS |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 8_3:+24212244 | Msa1283020:CDS |
ATGTCTATAAGATATATAGG+TGG | 0.643489 | 8_3:+24210782 | Msa1283020:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 8_3:-24212775 | None:intergenic |
ACGTGTTTGCGCAAATCCGG+AGG | 0.655332 | 8_3:+24212879 | Msa1283020:CDS |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 8_3:-24212365 | None:intergenic |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 8_3:+24212901 | Msa1283020:CDS |
TCAAACCATATACACAGACC+AGG | 0.671057 | 8_3:+24211821 | Msa1283020:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.683310 | 8_3:+24212504 | Msa1283020:CDS |
TGTTGATAATGATAATGAGA+GGG | 0.689129 | 8_3:+24212505 | Msa1283020:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTAATTATGCATATAACAC+TGG | + | chr8_3:24210517-24210536 | Msa1283020:CDS | 20.0% |
!! | ACAAAATAAGAAATCAGATA+AGG | + | chr8_3:24210579-24210598 | Msa1283020:CDS | 20.0% |
!! | TGAATGTCTATAAGATATAT+AGG | + | chr8_3:24210779-24210798 | Msa1283020:CDS | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | + | chr8_3:24211372-24211391 | Msa1283020:intron | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+GGG | + | chr8_3:24211400-24211419 | Msa1283020:intron | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | + | chr8_3:24212032-24212051 | Msa1283020:CDS | 20.0% |
! | TGAAAATTCAGTTATTGATG+CGG | + | chr8_3:24210408-24210427 | Msa1283020:CDS | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | - | chr8_3:24210569-24210588 | None:intergenic | 25.0% |
! | ATGTCTATAAGATATATAGG+TGG | + | chr8_3:24210782-24210801 | Msa1283020:CDS | 25.0% |
! | TGTCTATAAGATATATAGGT+GGG | + | chr8_3:24210783-24210802 | Msa1283020:CDS | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr8_3:24210895-24210914 | Msa1283020:CDS | 25.0% |
!!! | AAGACATAGCTAGTATTTTT+TGG | + | chr8_3:24211130-24211149 | Msa1283020:CDS | 25.0% |
!!! | AGACATAGCTAGTATTTTTT+GGG | + | chr8_3:24211131-24211150 | Msa1283020:CDS | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | + | chr8_3:24211217-24211236 | Msa1283020:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | - | chr8_3:24211243-24211262 | None:intergenic | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | + | chr8_3:24211290-24211309 | Msa1283020:intron | 25.0% |
! | TTGGTATATGTGTGTTAATT+TGG | + | chr8_3:24211329-24211348 | Msa1283020:intron | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | + | chr8_3:24211392-24211411 | Msa1283020:intron | 25.0% |
!!! | GAATTTAATGTTCTGGTTTA+TGG | + | chr8_3:24211399-24211418 | Msa1283020:intron | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | + | chr8_3:24211652-24211671 | Msa1283020:intron | 25.0% |
! | AAAACACCTTGAAAAACATT+CGG | - | chr8_3:24211870-24211889 | None:intergenic | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | + | chr8_3:24211962-24211981 | Msa1283020:CDS | 25.0% |
!!! | AATCAGATTTTGACTACAAT+TGG | + | chr8_3:24212003-24212022 | Msa1283020:CDS | 25.0% |
!!! | ATCAGATTTTGACTACAATT+GGG | + | chr8_3:24212004-24212023 | Msa1283020:CDS | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | + | chr8_3:24212036-24212055 | Msa1283020:CDS | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | + | chr8_3:24212229-24212248 | Msa1283020:CDS | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | - | chr8_3:24212368-24212387 | None:intergenic | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | - | chr8_3:24212403-24212422 | None:intergenic | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | + | chr8_3:24212403-24212422 | Msa1283020:CDS | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | + | chr8_3:24212504-24212523 | Msa1283020:CDS | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | + | chr8_3:24212505-24212524 | Msa1283020:CDS | 25.0% |
CCATGATTCTTTATCACTAA+AGG | - | chr8_3:24210452-24210471 | None:intergenic | 30.0% | |
CCTTTAGTGATAAAGAATCA+TGG | + | chr8_3:24210449-24210468 | Msa1283020:CDS | 30.0% | |
TAAAGAATCATGGAAGTCTT+TGG | + | chr8_3:24210459-24210478 | Msa1283020:CDS | 30.0% | |
TGTTATGCTTGTAACAAAGA+AGG | + | chr8_3:24210613-24210632 | Msa1283020:CDS | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | + | chr8_3:24210624-24210643 | Msa1283020:CDS | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | + | chr8_3:24210625-24210644 | Msa1283020:CDS | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | + | chr8_3:24210714-24210733 | Msa1283020:CDS | 30.0% | |
! | AGCTGGAATATATTTGAAGT+TGG | + | chr8_3:24210747-24210766 | Msa1283020:CDS | 30.0% |
! | AAATGCTCTGGTTTATGTAA+TGG | - | chr8_3:24210826-24210845 | None:intergenic | 30.0% |
AGAACATCTTATGAAGTGAT+GGG | + | chr8_3:24210928-24210947 | Msa1283020:CDS | 30.0% | |
! | GAATCTTCCTTTTCGATTTT+CGG | + | chr8_3:24210972-24210991 | Msa1283020:CDS | 30.0% |
TTTAAGTCCGAAAATCGAAA+AGG | - | chr8_3:24210982-24211001 | None:intergenic | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | - | chr8_3:24211096-24211115 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | + | chr8_3:24211168-24211187 | Msa1283020:CDS | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | - | chr8_3:24211221-24211240 | None:intergenic | 30.0% | |
AACAATAAATATCGGCCATT+AGG | + | chr8_3:24211225-24211244 | Msa1283020:CDS | 30.0% | |
!! | ATGTTCTGGTTTAGAATTGA+AGG | + | chr8_3:24211304-24211323 | Msa1283020:intron | 30.0% |
!! | TGGTTTAGAATTGAAGGTTT+TGG | + | chr8_3:24211310-24211329 | Msa1283020:intron | 30.0% |
AAACACATATGATCTTTCCA+TGG | - | chr8_3:24211463-24211482 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCACAA+TGG | + | chr8_3:24211611-24211630 | Msa1283020:intron | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | - | chr8_3:24211697-24211716 | None:intergenic | 30.0% | |
! | TATGGTTTGAGGTTTCTTAT+TGG | - | chr8_3:24211811-24211830 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | + | chr8_3:24211861-24211880 | Msa1283020:CDS | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | + | chr8_3:24211873-24211892 | Msa1283020:CDS | 30.0% |
GAGAATGCAAAGAAAAATCT+CGG | + | chr8_3:24211918-24211937 | Msa1283020:CDS | 30.0% | |
! | TCTTTTAATGCTTTTCTTCG+TGG | + | chr8_3:24212173-24212192 | Msa1283020:CDS | 30.0% |
TAAAGAATCGAACAAGTGAA+TGG | - | chr8_3:24212214-24212233 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | - | chr8_3:24212348-24212367 | None:intergenic | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | - | chr8_3:24212408-24212427 | None:intergenic | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | + | chr8_3:24212406-24212425 | Msa1283020:CDS | 30.0% | |
! | CAAAGTTTTCACAATTGAGA+AGG | + | chr8_3:24212463-24212482 | Msa1283020:CDS | 30.0% |
ATTATGATCTTCAAACCTTG+GGG | - | chr8_3:24212576-24212595 | None:intergenic | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | - | chr8_3:24212577-24212596 | None:intergenic | 30.0% | |
!! | ATCATAATCGACTTGATGAA+AGG | + | chr8_3:24212588-24212607 | Msa1283020:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | + | chr8_3:24212589-24212608 | Msa1283020:CDS | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | + | chr8_3:24212685-24212704 | Msa1283020:intron | 30.0% |
!! | ACATGTTTTCAAGATTTTGG+AGG | + | chr8_3:24212688-24212707 | Msa1283020:intron | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | + | chr8_3:24212734-24212753 | Msa1283020:intron | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | + | chr8_3:24212901-24212920 | Msa1283020:CDS | 30.0% |
TGAAGACTTAGAAGAAGTAA+CGG | - | chr8_3:24212995-24213014 | None:intergenic | 30.0% | |
! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr8_3:24213057-24213076 | None:intergenic | 30.0% |
AAGAAAGACCAAATCCAATT+AGG | + | chr8_3:24213064-24213083 | Msa1283020:CDS | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | - | chr8_3:24213075-24213094 | None:intergenic | 30.0% | |
!!! | GTGTTTGTTGCTGTTTTCAA+TGG | + | chr8_3:24210345-24210364 | Msa1283020:exon | 35.0% |
ATATCAACTTCATCTGAGAG+TGG | + | chr8_3:24210373-24210392 | Msa1283020:CDS | 35.0% | |
ATAACACTGGATTCTCTGTT+AGG | + | chr8_3:24210530-24210549 | Msa1283020:CDS | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | + | chr8_3:24210650-24210669 | Msa1283020:CDS | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | - | chr8_3:24210691-24210710 | None:intergenic | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | + | chr8_3:24210708-24210727 | Msa1283020:CDS | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | + | chr8_3:24210713-24210732 | Msa1283020:CDS | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | + | chr8_3:24210865-24210884 | Msa1283020:CDS | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | + | chr8_3:24210927-24210946 | Msa1283020:CDS | 35.0% | |
TCTAATGACAACTCGTCAAA+AGG | + | chr8_3:24211008-24211027 | Msa1283020:CDS | 35.0% | |
!! | CACAAATTCTAAGGCAAGAT+AGG | - | chr8_3:24211430-24211449 | None:intergenic | 35.0% |
TGTACAGAGCACAAATTCTA+AGG | - | chr8_3:24211439-24211458 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | + | chr8_3:24211714-24211733 | Msa1283020:CDS | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | + | chr8_3:24211757-24211776 | Msa1283020:CDS | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr8_3:24211886-24211905 | Msa1283020:CDS | 35.0% |
! | TTTTAATGGAAGGCCTACTT+CGG | + | chr8_3:24212046-24212065 | Msa1283020:CDS | 35.0% |
CTCATTCAAATCGTATGCAT+TGG | + | chr8_3:24212090-24212109 | Msa1283020:CDS | 35.0% | |
ACATTATGGTTCAGAGAATG+AGG | + | chr8_3:24212243-24212262 | Msa1283020:CDS | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | + | chr8_3:24212244-24212263 | Msa1283020:CDS | 35.0% | |
! | GAGGGATAATCATACTGATT+TGG | + | chr8_3:24212262-24212281 | Msa1283020:CDS | 35.0% |
!! | TCATACTGATTTGGACTTCA+AGG | + | chr8_3:24212271-24212290 | Msa1283020:CDS | 35.0% |
! | GGTTTCGAATGTTGATGTTT+TGG | + | chr8_3:24212526-24212545 | Msa1283020:CDS | 35.0% |
CGATTATGATCTTCAAACCT+TGG | - | chr8_3:24212578-24212597 | None:intergenic | 35.0% | |
!! | TTCAAGATTTTGGAGGTCTT+AGG | + | chr8_3:24212695-24212714 | Msa1283020:intron | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | - | chr8_3:24212736-24212755 | None:intergenic | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | + | chr8_3:24212737-24212756 | Msa1283020:intron | 35.0% |
CTGAAATCTACCATGAATGT+TGG | + | chr8_3:24212790-24212809 | Msa1283020:CDS | 35.0% | |
AGAAATATTTCAGATGCCTC+CGG | - | chr8_3:24212898-24212917 | None:intergenic | 35.0% | |
GAGGAGTTTCTTCTTTCTAA+AGG | + | chr8_3:24212949-24212968 | Msa1283020:CDS | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | + | chr8_3:24213130-24213149 | Msa1283020:CDS | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | + | chr8_3:24213155-24213174 | Msa1283020:CDS | 35.0% | |
ATCTGAGAGTGGACAATTGA+CGG | + | chr8_3:24210384-24210403 | Msa1283020:CDS | 40.0% | |
!! | TCACATGTTGGCCTGTTTTT+AGG | - | chr8_3:24210664-24210683 | None:intergenic | 40.0% |
!! | TCTTATGAAGTGATGGGTCA+AGG | + | chr8_3:24210934-24210953 | Msa1283020:CDS | 40.0% |
!!! | GCTAGTATTTTTTGGGCAGA+TGG | + | chr8_3:24211138-24211157 | Msa1283020:CDS | 40.0% |
TCCAGCTATGCAAAGATCAT+AGG | + | chr8_3:24211557-24211576 | Msa1283020:intron | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | - | chr8_3:24211561-24211580 | None:intergenic | 40.0% | |
TACATTTCAGCTGCCTTTCT+TGG | + | chr8_3:24211681-24211700 | Msa1283020:intron | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | - | chr8_3:24211822-24211841 | None:intergenic | 40.0% | |
TCAAACCATATACACAGACC+AGG | + | chr8_3:24211821-24211840 | Msa1283020:CDS | 40.0% | |
!! | TATGCATTGGTCTTCAGCTT+GGG | + | chr8_3:24212103-24212122 | Msa1283020:CDS | 40.0% |
! | GTGAGGTCACATTTTACAAC+TGG | + | chr8_3:24212125-24212144 | Msa1283020:CDS | 40.0% |
AATCGAACAAGTGAATGGTC+TGG | - | chr8_3:24212209-24212228 | None:intergenic | 40.0% | |
TATGAGGAGGACACAACAAA+AGG | + | chr8_3:24212419-24212438 | Msa1283020:CDS | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | + | chr8_3:24212420-24212439 | Msa1283020:CDS | 40.0% | |
TTGAAGAAAACCTTTCCCCA+AGG | + | chr8_3:24212558-24212577 | Msa1283020:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | + | chr8_3:24212651-24212670 | Msa1283020:intron | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | + | chr8_3:24212652-24212671 | Msa1283020:intron | 40.0% | |
!! | AAGATTTTGGAGGTCTTAGG+TGG | + | chr8_3:24212698-24212717 | Msa1283020:intron | 40.0% |
GATTTCAGCTTATCGACAGA+CGG | - | chr8_3:24212778-24212797 | None:intergenic | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | - | chr8_3:24212803-24212822 | None:intergenic | 40.0% | |
TTGATATCGTTGTGCTTGAG+TGG | - | chr8_3:24212827-24212846 | None:intergenic | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | + | chr8_3:24212912-24212931 | Msa1283020:CDS | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | - | chr8_3:24213081-24213100 | None:intergenic | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | - | chr8_3:24213143-24213162 | None:intergenic | 40.0% | |
AGAACTGGACTGTCACATGT+TGG | - | chr8_3:24210676-24210695 | None:intergenic | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | + | chr8_3:24210718-24210737 | Msa1283020:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | - | chr8_3:24210727-24210746 | None:intergenic | 45.0% | |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr8_3:24210730-24210749 | Msa1283020:CDS | 45.0% |
CTAAAGTAGCGCAAATGCTC+TGG | - | chr8_3:24210838-24210857 | None:intergenic | 45.0% | |
GACAACTCGTCAAAAGGAGA+TGG | + | chr8_3:24211014-24211033 | Msa1283020:CDS | 45.0% | |
AACTCGTCAAAAGGAGATGG+TGG | + | chr8_3:24211017-24211036 | Msa1283020:CDS | 45.0% | |
AATGAAGCTCTCTCGAAACC+AGG | + | chr8_3:24211075-24211094 | Msa1283020:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | - | chr8_3:24211116-24211135 | None:intergenic | 45.0% | |
ATTTGTGCTCTGTACAGCCA+TGG | + | chr8_3:24211443-24211462 | Msa1283020:intron | 45.0% | |
AGCCACTTAAAGTCCGAAGT+AGG | - | chr8_3:24212062-24212081 | None:intergenic | 45.0% | |
!! | GTATGCATTGGTCTTCAGCT+TGG | + | chr8_3:24212102-24212121 | Msa1283020:CDS | 45.0% |
ATCCCAACAGTCAGCTTATG+CGG | + | chr8_3:24212321-24212340 | Msa1283020:CDS | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | - | chr8_3:24212571-24212590 | None:intergenic | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | + | chr8_3:24212653-24212672 | Msa1283020:intron | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | - | chr8_3:24212673-24212692 | None:intergenic | 45.0% | |
TACACGTGTTTGCGCAAATC+CGG | + | chr8_3:24212876-24212895 | Msa1283020:CDS | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | + | chr8_3:24212924-24212943 | Msa1283020:CDS | 45.0% | |
CTGTCTGTGAACCATCTGTT+GGG | + | chr8_3:24213025-24213044 | Msa1283020:CDS | 45.0% | |
!! | GAAGTGATGGGTCAAGGAGT+TGG | + | chr8_3:24210940-24210959 | Msa1283020:CDS | 50.0% |
ACCATATACACAGACCAGGC+TGG | + | chr8_3:24211825-24211844 | Msa1283020:CDS | 50.0% | |
ACCAGCCTGGTCTGTGTATA+TGG | - | chr8_3:24211829-24211848 | None:intergenic | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | + | chr8_3:24211893-24211912 | Msa1283020:CDS | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | + | chr8_3:24211894-24211913 | Msa1283020:CDS | 50.0% | |
GGCCTACTTCGGACTTTAAG+TGG | + | chr8_3:24212057-24212076 | Msa1283020:CDS | 50.0% | |
!! | ATTGGTCTTCAGCTTGGGTG+AGG | + | chr8_3:24212108-24212127 | Msa1283020:CDS | 50.0% |
GACCGCATAAGCTGACTGTT+GGG | - | chr8_3:24212326-24212345 | None:intergenic | 50.0% | |
GGGTTGTCACAGTCGACATT+AGG | + | chr8_3:24212609-24212628 | Msa1283020:intron | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | + | chr8_3:24212917-24212936 | Msa1283020:CDS | 50.0% | |
GCTGTCTGTGAACCATCTGT+TGG | + | chr8_3:24213024-24213043 | Msa1283020:CDS | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | - | chr8_3:24213039-24213058 | None:intergenic | 50.0% |
!! | GTGATGGGTCAAGGAGTTGG+AGG | + | chr8_3:24210943-24210962 | Msa1283020:CDS | 55.0% |
! | CGTCAAAAGGAGATGGTGGC+TGG | + | chr8_3:24211021-24211040 | Msa1283020:CDS | 55.0% |
ACTTCAACAACGCACCAGCC+TGG | - | chr8_3:24211842-24211861 | None:intergenic | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | - | chr8_3:24212327-24212346 | None:intergenic | 55.0% | |
ACGTGTTTGCGCAAATCCGG+AGG | + | chr8_3:24212879-24212898 | Msa1283020:CDS | 55.0% | |
CTCAACGGTGTTCTTGAGGC+AGG | + | chr8_3:24212916-24212935 | Msa1283020:CDS | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | + | chr8_3:24212930-24212949 | Msa1283020:CDS | 55.0% | |
GGGTCAAGGAGTTGGAGGCA+CGG | + | chr8_3:24210948-24210967 | Msa1283020:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 24210319 | 24213191 | 24210319 | ID=Msa1283020;Name=Msa1283020 |
chr8_3 | mRNA | 24210319 | 24213191 | 24210319 | ID=Msa1283020-mRNA-1;Parent=Msa1283020;Name=Msa1283020-mRNA-1;_AED=0.06;_eAED=0.06;_QI=45|0.5|0.33|1|1|1|3|0|746 |
chr8_3 | exon | 24210319 | 24211246 | 24210319 | ID=Msa1283020-mRNA-1:exon:8558;Parent=Msa1283020-mRNA-1 |
chr8_3 | exon | 24211691 | 24212610 | 24211691 | ID=Msa1283020-mRNA-1:exon:8559;Parent=Msa1283020-mRNA-1 |
chr8_3 | exon | 24212754 | 24213191 | 24212754 | ID=Msa1283020-mRNA-1:exon:8560;Parent=Msa1283020-mRNA-1 |
chr8_3 | five_prime_UTR | 24210319 | 24210363 | 24210319 | ID=Msa1283020-mRNA-1:five_prime_utr;Parent=Msa1283020-mRNA-1 |
chr8_3 | CDS | 24210364 | 24211246 | 24210364 | ID=Msa1283020-mRNA-1:cds;Parent=Msa1283020-mRNA-1 |
chr8_3 | CDS | 24211691 | 24212610 | 24211691 | ID=Msa1283020-mRNA-1:cds;Parent=Msa1283020-mRNA-1 |
chr8_3 | CDS | 24212754 | 24213191 | 24212754 | ID=Msa1283020-mRNA-1:cds;Parent=Msa1283020-mRNA-1 |
Gene Sequence |
Protein sequence |