Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283100 | sp|Q8W3M0|EIL1B_ORYSJ | 51.362 | 257 | 114 | 6 | 53 | 306 | 120 | 368 | 7.73e-75 | 253 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283100 | A0A1S2YWS8 | 41.007 | 139 | 68 | 4 | 445 | 570 | 308 | 445 | 7.76e-18 | 98.6 |
| Msa1283100 | A0A1S2YWS8 | 49.024 | 410 | 185 | 10 | 1 | 402 | 1 | 394 | 3.06e-105 | 337 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1283100 | TF | EIL |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283100 | MtrunA17_Chr5g0440591 | 43.671 | 316 | 161 | 5 | 5 | 310 | 26 | 334 | 3.30e-78 | 258 |
| Msa1283100 | MtrunA17_Chr3g0118361 | 42.500 | 320 | 158 | 7 | 6 | 312 | 30 | 336 | 1.11e-71 | 241 |
| Msa1283100 | MtrunA17_Chr2g0329151 | 40.854 | 328 | 152 | 8 | 21 | 322 | 31 | 342 | 6.73e-65 | 223 |
| Msa1283100 | MtrunA17_Chr3g0124291 | 41.221 | 262 | 135 | 6 | 26 | 276 | 30 | 283 | 4.06e-61 | 208 |
| Msa1283100 | MtrunA17_Chr8g0382561 | 43.421 | 228 | 121 | 5 | 52 | 276 | 52 | 274 | 1.64e-56 | 196 |
| Msa1283100 | MtrunA17_Chr6g0473191 | 42.735 | 234 | 127 | 3 | 73 | 305 | 1 | 228 | 5.82e-56 | 190 |
| Msa1283100 | MtrunA17_Chr3g0080401 | 40.769 | 260 | 136 | 7 | 73 | 325 | 1 | 249 | 6.91e-56 | 191 |
| Msa1283100 | MtrunA17_Chr6g0476301 | 42.917 | 240 | 128 | 4 | 73 | 311 | 1 | 232 | 9.46e-56 | 192 |
| Msa1283100 | MtrunA17_Chr6g0476291 | 42.735 | 234 | 127 | 3 | 73 | 305 | 1 | 228 | 3.33e-55 | 187 |
| Msa1283100 | MtrunA17_Chr7g0260281 | 72.973 | 111 | 30 | 0 | 62 | 172 | 1 | 111 | 1.65e-43 | 151 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283100 | AT3G20770.1 | 43.087 | 311 | 150 | 5 | 12 | 307 | 33 | 331 | 1.29e-75 | 252 |
| Msa1283100 | AT2G27050.1 | 43.000 | 300 | 152 | 6 | 21 | 307 | 42 | 335 | 1.02e-71 | 241 |
| Msa1283100 | AT1G73730.2 | 41.009 | 317 | 155 | 7 | 21 | 317 | 19 | 323 | 1.75e-62 | 215 |
| Msa1283100 | AT1G73730.1 | 41.009 | 317 | 155 | 7 | 21 | 317 | 31 | 335 | 2.45e-62 | 215 |
| Msa1283100 | AT5G10120.1 | 44.643 | 224 | 120 | 2 | 55 | 277 | 59 | 279 | 3.88e-60 | 207 |
| Msa1283100 | AT5G65100.1 | 44.444 | 225 | 116 | 4 | 54 | 275 | 88 | 306 | 2.06e-57 | 202 |
| Msa1283100 | AT5G21120.3 | 41.445 | 263 | 135 | 6 | 55 | 306 | 87 | 341 | 1.58e-55 | 196 |
| Msa1283100 | AT5G21120.1 | 41.445 | 263 | 135 | 6 | 55 | 306 | 87 | 341 | 1.58e-55 | 196 |
| Msa1283100 | AT5G21120.2 | 41.065 | 263 | 136 | 6 | 55 | 306 | 94 | 348 | 1.60e-55 | 196 |
Find 131 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCACCTTGTGCACTTTC+TGG | 0.076552 | 8_3:-24335744 | None:intergenic |
| CAATAACCAACCAAAATATT+TGG | 0.137659 | 8_3:+24338191 | Msa1283100:CDS |
| GGAAACAAATCCAAATATTT+TGG | 0.152639 | 8_3:-24338201 | None:intergenic |
| CCTAGCTGGGTTTCATTCTT+TGG | 0.171554 | 8_3:+24338407 | Msa1283100:CDS |
| CCTACCTCAATCTGCTAATT+TGG | 0.184321 | 8_3:+24338263 | Msa1283100:CDS |
| CACTGAATTTGAATATTTCT+TGG | 0.201319 | 8_3:-24336121 | None:intergenic |
| CGGTTCCATGGACACTTTCT+TGG | 0.205051 | 8_3:-24337883 | None:intergenic |
| GGACTTCATTATAATGTTAA+TGG | 0.231962 | 8_3:+24336092 | Msa1283100:CDS |
| ATGTCTTATGACATTATATT+TGG | 0.263727 | 8_3:+24336211 | Msa1283100:CDS |
| GAATATAAGCATGGGTATTA+TGG | 0.267844 | 8_3:+24335806 | Msa1283100:CDS |
| GGCCTAATAACCTTGTTTCT+TGG | 0.269096 | 8_3:-24338306 | None:intergenic |
| CTCATATATAAAATGGAAAT+TGG | 0.271711 | 8_3:+24335699 | None:intergenic |
| CAACAATGAAGAAAGAAATT+TGG | 0.285533 | 8_3:+24335770 | Msa1283100:CDS |
| TGTACGTACCTTCTTTGATT+TGG | 0.287101 | 8_3:-24336241 | None:intergenic |
| TCCACCTCATTGTGTTGATT+TGG | 0.292463 | 8_3:+24337571 | Msa1283100:CDS |
| CATTTGGATTTGTTTCCATT+TGG | 0.311773 | 8_3:+24338138 | Msa1283100:CDS |
| AGATCATGAGGTTTCCTATA+GGG | 0.321543 | 8_3:-24337236 | None:intergenic |
| TGGTTCCATGAACACTTTCT+TGG | 0.324707 | 8_3:-24337745 | None:intergenic |
| CAATAATCAATGTCAACATT+TGG | 0.329717 | 8_3:+24338122 | Msa1283100:CDS |
| TTAATAACCATGCTGCTTCC+AGG | 0.333225 | 8_3:-24337686 | None:intergenic |
| TTCTGTAAGGACAATTCATT+TGG | 0.339985 | 8_3:-24338446 | None:intergenic |
| ACCATGGTGCTTCCATTTGA+TGG | 0.342571 | 8_3:-24337818 | None:intergenic |
| AGAGCGAGGTACGTGGTTAC+TGG | 0.343410 | 8_3:+24338342 | Msa1283100:CDS |
| TATGATGTTGATGGAAATAA+TGG | 0.343859 | 8_3:+24337512 | Msa1283100:CDS |
| CCAACCTCAATGTATGGATT+TGG | 0.345365 | 8_3:+24337715 | Msa1283100:CDS |
| CCAACCTCAATGTATGGATT+TGG | 0.345365 | 8_3:+24337853 | Msa1283100:CDS |
| CGTGCTGATGGATTTGTATA+TGG | 0.353695 | 8_3:+24335951 | Msa1283100:CDS |
| CCAACGTCAATGTATGGATT+TGG | 0.355037 | 8_3:+24337787 | Msa1283100:CDS |
| CTCGCTCTCCTGGTGGCAAT+TGG | 0.359933 | 8_3:-24338327 | None:intergenic |
| GTGCTCCTATTGTTGTGTTT+AGG | 0.361123 | 8_3:-24336181 | None:intergenic |
| TCTTGAACATTGTCTTTGAA+TGG | 0.363036 | 8_3:-24337596 | None:intergenic |
| CCAAATGGAAGCAATAATAA+TGG | 0.368258 | 8_3:+24337458 | Msa1283100:CDS |
| ACTCTTCAATACCTTGTCTA+TGG | 0.369025 | 8_3:-24335904 | None:intergenic |
| CTCCAAGAAACAAGGTTATT+AGG | 0.373520 | 8_3:+24338304 | Msa1283100:CDS |
| CCATTCCAAGAAAGTGTTCA+TGG | 0.375962 | 8_3:+24337740 | Msa1283100:CDS |
| TATTTGGATTTGTTTCCATC+TGG | 0.385511 | 8_3:+24338207 | Msa1283100:CDS |
| CCTTACAGAAATAACTCTTC+TGG | 0.387874 | 8_3:+24338459 | Msa1283100:CDS |
| GAACTCCTAAACACAACAAT+AGG | 0.388891 | 8_3:+24336176 | Msa1283100:CDS |
| CATTATAATGAAGTCCTTGT+TGG | 0.390991 | 8_3:-24336085 | None:intergenic |
| TTGGTTCCATTTCCATCAAA+TGG | 0.392196 | 8_3:+24337806 | Msa1283100:CDS |
| GTGCTTCCATTTGATGGAAA+TGG | 0.394257 | 8_3:-24337812 | None:intergenic |
| CCAGAAGAGTTATTTCTGTA+AGG | 0.399499 | 8_3:-24338459 | None:intergenic |
| TTCCTATAGGGTGGAGGACC+TGG | 0.400683 | 8_3:-24337224 | None:intergenic |
| CTATCATGTTCATTGTTGCC+TGG | 0.400918 | 8_3:-24335861 | None:intergenic |
| CCATTATTATTGCTTCCATT+TGG | 0.403275 | 8_3:-24337458 | None:intergenic |
| TCATTATAATGTTAATGGTT+CGG | 0.414528 | 8_3:+24336097 | Msa1283100:CDS |
| CCTTATCATAGCCACCTAGC+TGG | 0.416024 | 8_3:+24338393 | Msa1283100:CDS |
| GAGCGAAGTTAGTGGCCTCT+TGG | 0.417939 | 8_3:-24337376 | None:intergenic |
| ACTCATAATTATGATGTTGA+TGG | 0.419818 | 8_3:+24337503 | Msa1283100:CDS |
| CCCCTTGGCCACCATGGTGG+TGG | 0.420832 | 8_3:-24337161 | None:intergenic |
| TAGATCATGAGGTTTCCTAT+AGG | 0.421514 | 8_3:-24337237 | None:intergenic |
| TAATAACCAACGTCAATGTA+TGG | 0.431013 | 8_3:+24337781 | Msa1283100:CDS |
| CAATAACCAACCTCAATGTA+TGG | 0.431840 | 8_3:+24337847 | Msa1283100:CDS |
| AAATAACCAACCTCAATGTA+TGG | 0.435118 | 8_3:+24337709 | Msa1283100:CDS |
| CCATGAACACTTTCTTGGAA+TGG | 0.437818 | 8_3:-24337740 | None:intergenic |
| CCATGGACACTTTCTTGGAA+TGG | 0.437818 | 8_3:-24337878 | None:intergenic |
| AGCGAAGTTAGTGGCCTCTT+GGG | 0.440264 | 8_3:-24337375 | None:intergenic |
| CCAGGAACACTTGCTTGAAA+AGG | 0.440379 | 8_3:-24337668 | None:intergenic |
| TTCCACCACCATGGTGGCCA+AGG | 0.449334 | 8_3:+24337159 | Msa1283100:CDS |
| CCAGCTAGGTGGCTATGATA+AGG | 0.457593 | 8_3:-24338393 | None:intergenic |
| CACCATTCTTCATCTCCCCT+TGG | 0.458151 | 8_3:-24337176 | None:intergenic |
| CTGAAAATCTTCAACATTGG+TGG | 0.458620 | 8_3:+24336012 | Msa1283100:CDS |
| AGCTGGGTTTCATTCTTTGG+AGG | 0.464728 | 8_3:+24338410 | Msa1283100:CDS |
| TTATTATTGCTTCCATTTGG+TGG | 0.472616 | 8_3:-24337455 | None:intergenic |
| ATGCACAAGTTGGTAGATCT+TGG | 0.474850 | 8_3:+24335927 | Msa1283100:CDS |
| ATCCAGGTCCTCCACCCTAT+AGG | 0.477367 | 8_3:+24337222 | Msa1283100:CDS |
| AAAGTGAAGTTTGATAGAAA+TGG | 0.479002 | 8_3:+24336041 | Msa1283100:CDS |
| GTAGATCTTGGTCGTGCTGA+TGG | 0.482508 | 8_3:+24335939 | Msa1283100:CDS |
| GTTGTAATCCAAATCAAAGA+AGG | 0.482832 | 8_3:+24336233 | Msa1283100:CDS |
| GTAACCAAATTAGCAGATTG+AGG | 0.484664 | 8_3:-24338267 | None:intergenic |
| GACCAGGTAGTTCAAGTAAT+GGG | 0.486798 | 8_3:+24337537 | Msa1283100:CDS |
| CAGCTAGGTGGCTATGATAA+GGG | 0.488469 | 8_3:-24338392 | None:intergenic |
| TCAAATGAGTTACCACCAAA+TGG | 0.488806 | 8_3:+24337443 | Msa1283100:CDS |
| CTTATCATAGCCACCTAGCT+GGG | 0.489975 | 8_3:+24338394 | Msa1283100:CDS |
| TCATCTCCCCTTGGCCACCA+TGG | 0.490729 | 8_3:-24337167 | None:intergenic |
| AATAACAAGAGCGAAGTTAG+TGG | 0.507267 | 8_3:-24337384 | None:intergenic |
| TGGTACTTCACTATTGCAGC+AGG | 0.513940 | 8_3:-24336065 | None:intergenic |
| AACCACGTACCTCGCTCTCC+TGG | 0.514697 | 8_3:-24338337 | None:intergenic |
| CCAAATCCATACATTGAGGT+TGG | 0.529172 | 8_3:-24337715 | None:intergenic |
| CCAAATCCATACATTGAGGT+TGG | 0.529172 | 8_3:-24337853 | None:intergenic |
| TGCCCATTACTTGAACTACC+TGG | 0.531064 | 8_3:-24337539 | None:intergenic |
| TTGTGTTATCGAAAGGATCC+AGG | 0.537060 | 8_3:+24337206 | Msa1283100:CDS |
| TTCAAAGACAATGTTCAAGA+AGG | 0.537403 | 8_3:+24337599 | Msa1283100:CDS |
| CATCTGAAAATCTTCAACAT+TGG | 0.541776 | 8_3:+24336009 | Msa1283100:CDS |
| CCAAATTAGCAGATTGAGGT+AGG | 0.544542 | 8_3:-24338263 | None:intergenic |
| TCCACCACCATGGTGGCCAA+GGG | 0.545349 | 8_3:+24337160 | Msa1283100:CDS |
| GAAATTTGGAGGAATATGAA+AGG | 0.546481 | 8_3:+24335784 | Msa1283100:CDS |
| CAAAATCTATACATTGAGGT+TGG | 0.547188 | 8_3:-24337643 | None:intergenic |
| CCATTCCAAGAAAGTGTCCA+TGG | 0.548559 | 8_3:+24337878 | Msa1283100:CDS |
| AGATAAAATGTCTGCCCAAG+AGG | 0.559954 | 8_3:+24337361 | Msa1283100:CDS |
| TTGGTTATTGTTAACAACCA+TGG | 0.564781 | 8_3:-24337834 | None:intergenic |
| ATATGAAAGGAATATAAGCA+TGG | 0.566014 | 8_3:+24335797 | Msa1283100:CDS |
| GGCCAAGGGGAGATGAAGAA+TGG | 0.566706 | 8_3:+24337174 | Msa1283100:CDS |
| GGACCAGGTAGTTCAAGTAA+TGG | 0.567507 | 8_3:+24337536 | Msa1283100:CDS |
| CAATGAAGAAAGAAATTTGG+AGG | 0.568734 | 8_3:+24335773 | Msa1283100:CDS |
| GGAGCAAAATCTATACATTG+AGG | 0.569747 | 8_3:-24337647 | None:intergenic |
| TTATTAGGCCAATTGCCACC+AGG | 0.570900 | 8_3:+24338319 | Msa1283100:CDS |
| GCCGCTATTGTGTTATCGAA+AGG | 0.571370 | 8_3:+24337199 | Msa1283100:CDS |
| TATGAAAGGAATATAAGCAT+GGG | 0.585257 | 8_3:+24335798 | Msa1283100:CDS |
| ATTGAAGAGTATGCACAAGT+TGG | 0.591118 | 8_3:+24335917 | Msa1283100:CDS |
| GATGGAAATAATGGAGGACC+AGG | 0.593292 | 8_3:+24337521 | Msa1283100:CDS |
| CAATGTTCAAGAAGGAAACA+TGG | 0.598064 | 8_3:+24337607 | Msa1283100:CDS |
| AAATCTTCAACATTGGTGGA+AGG | 0.602303 | 8_3:+24336016 | Msa1283100:CDS |
| TCTCCCCTTGGCCACCATGG+TGG | 0.603176 | 8_3:-24337164 | None:intergenic |
| TGAGGTTTCCTATAGGGTGG+AGG | 0.603546 | 8_3:-24337230 | None:intergenic |
| CCAAAGAATGAAACCCAGCT+AGG | 0.605751 | 8_3:-24338407 | None:intergenic |
| CCAAATCCATACATTGACGT+TGG | 0.608283 | 8_3:-24337787 | None:intergenic |
| CCAAATCCATACATTGACGT+TGG | 0.608283 | 8_3:-24337925 | None:intergenic |
| GGAACCAAATCCATACATTG+AGG | 0.608410 | 8_3:-24337719 | None:intergenic |
| GGAACCAAATCCATACATTG+AGG | 0.608410 | 8_3:-24337857 | None:intergenic |
| TCCAGCAAATGGAAGCAACA+TGG | 0.615255 | 8_3:+24338092 | Msa1283100:intron |
| TCATGAGGTTTCCTATAGGG+TGG | 0.619245 | 8_3:-24337233 | None:intergenic |
| ACCAAATCAACACAATGAGG+TGG | 0.621822 | 8_3:-24337572 | None:intergenic |
| AAGTGTTCATGGAACCAACA+TGG | 0.623776 | 8_3:+24337751 | Msa1283100:CDS |
| CACGTACCTCGCTCTCCTGG+TGG | 0.624504 | 8_3:-24338334 | None:intergenic |
| CCACCACCATGGTGGCCAAG+GGG | 0.638555 | 8_3:+24337161 | Msa1283100:CDS |
| AAGTGTCCATGGAACCGACA+TGG | 0.646793 | 8_3:+24337889 | Msa1283100:CDS |
| TCCATCAAATGGAAGCACCA+TGG | 0.648218 | 8_3:+24337817 | Msa1283100:CDS |
| AAGTGTTCCTGGAAGCAGCA+TGG | 0.648471 | 8_3:+24337679 | Msa1283100:CDS |
| CAATTGCCACCAGGAGAGCG+AGG | 0.660773 | 8_3:+24338328 | Msa1283100:CDS |
| CACCAGGAGAGCGAGGTACG+TGG | 0.665675 | 8_3:+24338335 | Msa1283100:CDS |
| GATGTTGATGGAAATAATGG+AGG | 0.666614 | 8_3:+24337515 | Msa1283100:CDS |
| CAAGGGGAGATGAAGAATGG+TGG | 0.668606 | 8_3:+24337177 | Msa1283100:CDS |
| TCCTTTCGATAACACAATAG+CGG | 0.668694 | 8_3:-24337200 | None:intergenic |
| AAGAATGAAACCCAGCTAGG+TGG | 0.679661 | 8_3:-24338404 | None:intergenic |
| GGAACCAAATCAACACAATG+AGG | 0.681148 | 8_3:-24337575 | None:intergenic |
| TGGCTATGATAAGGGCAATG+TGG | 0.683056 | 8_3:-24338384 | None:intergenic |
| AAATCACCAGAAAGTGCACA+AGG | 0.687654 | 8_3:+24335738 | Msa1283100:CDS |
| ATTGAGTAACACCATAGACA+AGG | 0.713130 | 8_3:+24335893 | Msa1283100:CDS |
| GCAATAGTGAAGTACCAACA+AGG | 0.715198 | 8_3:+24336071 | Msa1283100:CDS |
| AAGGTGTTCCACCACCATGG+TGG | 0.732712 | 8_3:+24337153 | Msa1283100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGAATAATTAATTTTAGTA+CGG | - | chr8_3:24336903-24336922 | None:intergenic | 10.0% |
| !!! | TATTTTTGTGAAATTATTAC+CGG | - | chr8_3:24336334-24336353 | None:intergenic | 15.0% |
| !!! | TATCTAAAATCTTAAAACAT+TGG | - | chr8_3:24336685-24336704 | None:intergenic | 15.0% |
| !!! | TAAGATTTTAGATAAAAATG+TGG | + | chr8_3:24336691-24336710 | Msa1283100:intron | 15.0% |
| !!! | TGTTTTTTGTATTTTGAAAT+TGG | + | chr8_3:24337081-24337100 | Msa1283100:intron | 15.0% |
| !! | TATGGAATTATTCCAAAAAA+TGG | + | chr8_3:24335969-24335988 | Msa1283100:CDS | 20.0% |
| !! | TCATTATAATGTTAATGGTT+CGG | + | chr8_3:24336097-24336116 | Msa1283100:CDS | 20.0% |
| !! | ATGTCTTATGACATTATATT+TGG | + | chr8_3:24336211-24336230 | Msa1283100:CDS | 20.0% |
| !! | TTAAATATAATCACATGTCT+AGG | + | chr8_3:24336360-24336379 | Msa1283100:intron | 20.0% |
| !!! | TCTAATTTTGCATCTAATAA+GGG | - | chr8_3:24336627-24336646 | None:intergenic | 20.0% |
| !!! | TTCTAATTTTGCATCTAATA+AGG | - | chr8_3:24336628-24336647 | None:intergenic | 20.0% |
| !! | AGAAGTTAAGCAATATATAA+AGG | + | chr8_3:24336644-24336663 | Msa1283100:intron | 20.0% |
| !! | TGTGTGTCAATATATATATT+GGG | + | chr8_3:24336812-24336831 | Msa1283100:intron | 20.0% |
| !!! | AGATTCTCATTATTTTGAAA+TGG | + | chr8_3:24336847-24336866 | Msa1283100:intron | 20.0% |
| !!! | GATTCTCATTATTTTGAAAT+GGG | + | chr8_3:24336848-24336867 | Msa1283100:intron | 20.0% |
| !!! | TCCTTATTTTACTAAAATCA+GGG | - | chr8_3:24337313-24337332 | None:intergenic | 20.0% |
| ! | CAACAATGAAGAAAGAAATT+TGG | + | chr8_3:24335770-24335789 | Msa1283100:CDS | 25.0% |
| ! | ATATGAAAGGAATATAAGCA+TGG | + | chr8_3:24335797-24335816 | Msa1283100:CDS | 25.0% |
| ! | TATGAAAGGAATATAAGCAT+GGG | + | chr8_3:24335798-24335817 | Msa1283100:CDS | 25.0% |
| ! | AAAGTGAAGTTTGATAGAAA+TGG | + | chr8_3:24336041-24336060 | Msa1283100:CDS | 25.0% |
| ! | GGACTTCATTATAATGTTAA+TGG | + | chr8_3:24336092-24336111 | Msa1283100:CDS | 25.0% |
| ! | CACTGAATTTGAATATTTCT+TGG | - | chr8_3:24336124-24336143 | None:intergenic | 25.0% |
| ! | TACATGAATTCGTTACTAAT+AGG | + | chr8_3:24336498-24336517 | Msa1283100:intron | 25.0% |
| ! | TGTTAAAACTCAATTGTGTA+TGG | + | chr8_3:24336714-24336733 | Msa1283100:intron | 25.0% |
| ! | GTGTGTGTCAATATATATAT+TGG | + | chr8_3:24336811-24336830 | Msa1283100:intron | 25.0% |
| ! | TATTCAATTAACAAACGAAG+TGG | + | chr8_3:24336916-24336935 | Msa1283100:intron | 25.0% |
| ! | ATTCAATTAACAAACGAAGT+GGG | + | chr8_3:24336917-24336936 | Msa1283100:intron | 25.0% |
| ! | ATTTGTCTAATCAATGACAT+TGG | + | chr8_3:24336983-24337002 | Msa1283100:intron | 25.0% |
| !!! | TTTTCGTATTTTGTTTCCTT+TGG | + | chr8_3:24337046-24337065 | Msa1283100:intron | 25.0% |
| !!! | CCTTATTTTACTAAAATCAG+GGG | - | chr8_3:24337312-24337331 | None:intergenic | 25.0% |
| !!! | CTCCTTATTTTACTAAAATC+AGG | - | chr8_3:24337314-24337333 | None:intergenic | 25.0% |
| !! | CATTTTATCTTGAAGATTCT+TGG | - | chr8_3:24337351-24337370 | None:intergenic | 25.0% |
| ! | ACTCATAATTATGATGTTGA+TGG | + | chr8_3:24337503-24337522 | Msa1283100:CDS | 25.0% |
| !! | TATGATGTTGATGGAAATAA+TGG | + | chr8_3:24337512-24337531 | Msa1283100:CDS | 25.0% |
| ! | GTTATTACTAAAAACCATGT+TGG | - | chr8_3:24337768-24337787 | None:intergenic | 25.0% |
| ! | GTTATTGTTAAAAACCATGT+CGG | - | chr8_3:24337906-24337925 | None:intergenic | 25.0% |
| ! | GTTATTGTTAAAAACCATGT+TGG | - | chr8_3:24337906-24337925 | None:intergenic | 25.0% |
| ! | CAATAATCAATGTCAACATT+TGG | + | chr8_3:24338122-24338141 | Msa1283100:CDS | 25.0% |
| ! | CAATAACCAACCAAAATATT+TGG | + | chr8_3:24338191-24338210 | Msa1283100:CDS | 25.0% |
| !!! | ACAAATCCAAATATTTTGGT+TGG | - | chr8_3:24338200-24338219 | None:intergenic | 25.0% |
| !! | GGAAACAAATCCAAATATTT+TGG | - | chr8_3:24338204-24338223 | None:intergenic | 25.0% |
| CAATGAAGAAAGAAATTTGG+AGG | + | chr8_3:24335773-24335792 | Msa1283100:CDS | 30.0% | |
| GAAATTTGGAGGAATATGAA+AGG | + | chr8_3:24335784-24335803 | Msa1283100:CDS | 30.0% | |
| GAATATAAGCATGGGTATTA+TGG | + | chr8_3:24335806-24335825 | Msa1283100:CDS | 30.0% | |
| GGAATTGAAAAATCTTCGTA+AGG | + | chr8_3:24335827-24335846 | Msa1283100:CDS | 30.0% | |
| !!! | CTTATCGGTTTTCCATTTTT+TGG | - | chr8_3:24335984-24336003 | None:intergenic | 30.0% |
| CATCTGAAAATCTTCAACAT+TGG | + | chr8_3:24336009-24336028 | Msa1283100:CDS | 30.0% | |
| CATTATAATGAAGTCCTTGT+TGG | - | chr8_3:24336088-24336107 | None:intergenic | 30.0% | |
| GTTGTAATCCAAATCAAAGA+AGG | + | chr8_3:24336233-24336252 | Msa1283100:CDS | 30.0% | |
| ATAAACGTTAGTGTCATGTT+TGG | - | chr8_3:24336302-24336321 | None:intergenic | 30.0% | |
| ATATATCATACACGAGTCAT+GGG | - | chr8_3:24336559-24336578 | None:intergenic | 30.0% | |
| AACACGTTTATATTGTCCAA+AGG | - | chr8_3:24337065-24337084 | None:intergenic | 30.0% | |
| ! | TAAACCGTAACATTTTGAAC+AGG | + | chr8_3:24337117-24337136 | Msa1283100:intron | 30.0% |
| GAAACCTGTTCAAAATGTTA+CGG | - | chr8_3:24337124-24337143 | None:intergenic | 30.0% | |
| ! | AACAGGTTTCCTTTAGAAAA+AGG | + | chr8_3:24337134-24337153 | Msa1283100:intron | 30.0% |
| GAAACCTCATGATCTAAAAA+AGG | + | chr8_3:24337244-24337263 | Msa1283100:CDS | 30.0% | |
| !!! | CAATCCTTTTTTAGATCATG+AGG | - | chr8_3:24337251-24337270 | None:intergenic | 30.0% |
| CTCATGATCTAAAAAAGGAT+TGG | + | chr8_3:24337249-24337268 | Msa1283100:CDS | 30.0% | |
| !! | CCCCTGATTTTAGTAAAATA+AGG | + | chr8_3:24337309-24337328 | Msa1283100:CDS | 30.0% |
| TTATTATTGCTTCCATTTGG+TGG | - | chr8_3:24337458-24337477 | None:intergenic | 30.0% | |
| CCATTATTATTGCTTCCATT+TGG | - | chr8_3:24337461-24337480 | None:intergenic | 30.0% | |
| CCAAATGGAAGCAATAATAA+TGG | + | chr8_3:24337458-24337477 | Msa1283100:CDS | 30.0% | |
| TCTTGAACATTGTCTTTGAA+TGG | - | chr8_3:24337599-24337618 | None:intergenic | 30.0% | |
| TTCAAAGACAATGTTCAAGA+AGG | + | chr8_3:24337599-24337618 | Msa1283100:CDS | 30.0% | |
| CAAAATCTATACATTGAGGT+TGG | - | chr8_3:24337646-24337665 | None:intergenic | 30.0% | |
| AAATAACCAACCTCAATGTA+TGG | + | chr8_3:24337709-24337728 | Msa1283100:CDS | 30.0% | |
| TAATAACCAACGTCAATGTA+TGG | + | chr8_3:24337781-24337800 | Msa1283100:CDS | 30.0% | |
| TTGGTTATTGTTAACAACCA+TGG | - | chr8_3:24337837-24337856 | None:intergenic | 30.0% | |
| ! | CATTTGGATTTGTTTCCATT+TGG | + | chr8_3:24338138-24338157 | Msa1283100:CDS | 30.0% |
| !!! | CCTTCAACTTTTTTTCCAAA+TGG | - | chr8_3:24338156-24338175 | None:intergenic | 30.0% |
| CCATTTGGAAAAAAAGTTGA+AGG | + | chr8_3:24338153-24338172 | Msa1283100:CDS | 30.0% | |
| ! | TATTTGGATTTGTTTCCATC+TGG | + | chr8_3:24338207-24338226 | Msa1283100:CDS | 30.0% |
| AAAAAATGCTCCAAGAAACA+AGG | + | chr8_3:24338296-24338315 | Msa1283100:CDS | 30.0% | |
| TTCTGTAAGGACAATTCATT+TGG | - | chr8_3:24338449-24338468 | None:intergenic | 30.0% | |
| CGTAAGGAAGTAAAAAATCC+AGG | + | chr8_3:24335843-24335862 | Msa1283100:CDS | 35.0% | |
| ATTGAGTAACACCATAGACA+AGG | + | chr8_3:24335893-24335912 | Msa1283100:CDS | 35.0% | |
| ACTCTTCAATACCTTGTCTA+TGG | - | chr8_3:24335907-24335926 | None:intergenic | 35.0% | |
| ! | ATTGAAGAGTATGCACAAGT+TGG | + | chr8_3:24335917-24335936 | Msa1283100:CDS | 35.0% |
| ! | TTTTCAGATGCAGCACTTAT+CGG | - | chr8_3:24335999-24336018 | None:intergenic | 35.0% |
| CTGAAAATCTTCAACATTGG+TGG | + | chr8_3:24336012-24336031 | Msa1283100:CDS | 35.0% | |
| AAATCTTCAACATTGGTGGA+AGG | + | chr8_3:24336016-24336035 | Msa1283100:CDS | 35.0% | |
| GAACTCCTAAACACAACAAT+AGG | + | chr8_3:24336176-24336195 | Msa1283100:CDS | 35.0% | |
| TGTACGTACCTTCTTTGATT+TGG | - | chr8_3:24336244-24336263 | None:intergenic | 35.0% | |
| !! | TATAGCATCGACATCTTTGA+TGG | - | chr8_3:24336418-24336437 | None:intergenic | 35.0% |
| GATATATCATACACGAGTCA+TGG | - | chr8_3:24336560-24336579 | None:intergenic | 35.0% | |
| GACTCGTGTATGATATATCA+AGG | + | chr8_3:24336561-24336580 | Msa1283100:intron | 35.0% | |
| !! | ATTCATCACAATGGGTTAAG+AGG | - | chr8_3:24336742-24336761 | None:intergenic | 35.0% |
| CATCACAGATTCATCACAAT+GGG | - | chr8_3:24336750-24336769 | None:intergenic | 35.0% | |
| ACATCACAGATTCATCACAA+TGG | - | chr8_3:24336751-24336770 | None:intergenic | 35.0% | |
| CACATTATTGGGACTTCTAA+GGG | - | chr8_3:24336782-24336801 | None:intergenic | 35.0% | |
| ACACATTATTGGGACTTCTA+AGG | - | chr8_3:24336783-24336802 | None:intergenic | 35.0% | |
| ACACACACAGACACATTATT+GGG | - | chr8_3:24336793-24336812 | None:intergenic | 35.0% | |
| TCCTTTCGATAACACAATAG+CGG | - | chr8_3:24337203-24337222 | None:intergenic | 35.0% | |
| AGATCATGAGGTTTCCTATA+GGG | - | chr8_3:24337239-24337258 | None:intergenic | 35.0% | |
| TAGATCATGAGGTTTCCTAT+AGG | - | chr8_3:24337240-24337259 | None:intergenic | 35.0% | |
| AATAACAAGAGCGAAGTTAG+TGG | - | chr8_3:24337387-24337406 | None:intergenic | 35.0% | |
| TCAAATGAGTTACCACCAAA+TGG | + | chr8_3:24337443-24337462 | Msa1283100:CDS | 35.0% | |
| ! | GATGTTGATGGAAATAATGG+AGG | + | chr8_3:24337515-24337534 | Msa1283100:CDS | 35.0% |
| CAATGTTCAAGAAGGAAACA+TGG | + | chr8_3:24337607-24337626 | Msa1283100:CDS | 35.0% | |
| GGAGCAAAATCTATACATTG+AGG | - | chr8_3:24337650-24337669 | None:intergenic | 35.0% | |
| TTGGTTCCATTTCCATCAAA+TGG | + | chr8_3:24337806-24337825 | Msa1283100:CDS | 35.0% | |
| CAATAACCAACCTCAATGTA+TGG | + | chr8_3:24337847-24337866 | Msa1283100:CDS | 35.0% | |
| CAATAACCAACGTCAATGTA+TGG | + | chr8_3:24337919-24337938 | Msa1283100:intron | 35.0% | |
| ! | TTGCTTTCATTTGCTGGAAA+TGG | - | chr8_3:24337953-24337972 | None:intergenic | 35.0% |
| CAATAACCAACCTCAACATT+TGG | + | chr8_3:24337984-24338003 | Msa1283100:intron | 35.0% | |
| !! | TAAAAACCATGTTGGTTCCA+TGG | - | chr8_3:24337760-24337779 | None:intergenic | 35.0% |
| CAATAACCAACGTCAATGTA+TGG | + | chr8_3:24337919-24337938 | Msa1283100:intron | 35.0% | |
| !!! | CCTTGAACATTTTTTCCAGA+TGG | - | chr8_3:24338225-24338244 | None:intergenic | 35.0% |
| CCATCTGGAAAAAATGTTCA+AGG | + | chr8_3:24338222-24338241 | Msa1283100:CDS | 35.0% | |
| GTAACCAAATTAGCAGATTG+AGG | - | chr8_3:24338270-24338289 | None:intergenic | 35.0% | |
| CTCCAAGAAACAAGGTTATT+AGG | + | chr8_3:24338304-24338323 | Msa1283100:CDS | 35.0% | |
| !! | CCAGAAGAGTTATTTCTGTA+AGG | - | chr8_3:24338462-24338481 | None:intergenic | 35.0% |
| CCTTACAGAAATAACTCTTC+TGG | + | chr8_3:24338459-24338478 | Msa1283100:CDS | 35.0% | |
| ! | AAATCACCAGAAAGTGCACA+AGG | + | chr8_3:24335738-24335757 | Msa1283100:CDS | 40.0% |
| CTATCATGTTCATTGTTGCC+TGG | - | chr8_3:24335864-24335883 | None:intergenic | 40.0% | |
| !! | ATGCACAAGTTGGTAGATCT+TGG | + | chr8_3:24335927-24335946 | Msa1283100:CDS | 40.0% |
| !! | CGTGCTGATGGATTTGTATA+TGG | + | chr8_3:24335951-24335970 | Msa1283100:CDS | 40.0% |
| ! | GCAATAGTGAAGTACCAACA+AGG | + | chr8_3:24336071-24336090 | Msa1283100:CDS | 40.0% |
| GTGCTCCTATTGTTGTGTTT+AGG | - | chr8_3:24336184-24336203 | None:intergenic | 40.0% | |
| TAACGTTTATGCTTCGACAC+CGG | + | chr8_3:24336312-24336331 | Msa1283100:intron | 40.0% | |
| !! | ACATGTCTAGGTGTCATTTG+AGG | + | chr8_3:24336372-24336391 | Msa1283100:intron | 40.0% |
| TCCCAAAACACAGAGAGAAA+TGG | + | chr8_3:24336523-24336542 | Msa1283100:intron | 40.0% | |
| ! | CCCATTTCTCTCTGTGTTTT+GGG | - | chr8_3:24336527-24336546 | None:intergenic | 40.0% |
| CCCAAAACACAGAGAGAAAT+GGG | + | chr8_3:24336524-24336543 | Msa1283100:intron | 40.0% | |
| ! | ACCCATTTCTCTCTGTGTTT+TGG | - | chr8_3:24336528-24336547 | None:intergenic | 40.0% |
| CACACACACAGACACATTAT+TGG | - | chr8_3:24336794-24336813 | None:intergenic | 40.0% | |
| ! | GGTGGAACACCTTTTTCTAA+AGG | - | chr8_3:24337146-24337165 | None:intergenic | 40.0% |
| TTGTGTTATCGAAAGGATCC+AGG | + | chr8_3:24337206-24337225 | Msa1283100:CDS | 40.0% | |
| AGATAAAATGTCTGCCCAAG+AGG | + | chr8_3:24337361-24337380 | Msa1283100:CDS | 40.0% | |
| GACCAGGTAGTTCAAGTAAT+GGG | + | chr8_3:24337537-24337556 | Msa1283100:CDS | 40.0% | |
| !! | TCCACCTCATTGTGTTGATT+TGG | + | chr8_3:24337571-24337590 | Msa1283100:CDS | 40.0% |
| ACCAAATCAACACAATGAGG+TGG | - | chr8_3:24337575-24337594 | None:intergenic | 40.0% | |
| GGAACCAAATCAACACAATG+AGG | - | chr8_3:24337578-24337597 | None:intergenic | 40.0% | |
| ! | TTAATAACCATGCTGCTTCC+AGG | - | chr8_3:24337689-24337708 | None:intergenic | 40.0% |
| CCAAATCCATACATTGAGGT+TGG | - | chr8_3:24337718-24337737 | None:intergenic | 40.0% | |
| CCAACCTCAATGTATGGATT+TGG | + | chr8_3:24337715-24337734 | Msa1283100:CDS | 40.0% | |
| GGAACCAAATCCATACATTG+AGG | - | chr8_3:24337722-24337741 | None:intergenic | 40.0% | |
| CCATGAACACTTTCTTGGAA+TGG | - | chr8_3:24337743-24337762 | None:intergenic | 40.0% | |
| !! | CCATTCCAAGAAAGTGTTCA+TGG | + | chr8_3:24337740-24337759 | Msa1283100:CDS | 40.0% |
| TGGTTCCATGAACACTTTCT+TGG | - | chr8_3:24337748-24337767 | None:intergenic | 40.0% | |
| AAGTGTTCATGGAACCAACA+TGG | + | chr8_3:24337751-24337770 | Msa1283100:CDS | 40.0% | |
| CCAAATCCATACATTGACGT+TGG | - | chr8_3:24337790-24337809 | None:intergenic | 40.0% | |
| CCAACGTCAATGTATGGATT+TGG | + | chr8_3:24337787-24337806 | Msa1283100:CDS | 40.0% | |
| GTGCTTCCATTTGATGGAAA+TGG | - | chr8_3:24337815-24337834 | None:intergenic | 40.0% | |
| CCAAATCCATACATTGAGGT+TGG | - | chr8_3:24337718-24337737 | None:intergenic | 40.0% | |
| CCAACCTCAATGTATGGATT+TGG | + | chr8_3:24337715-24337734 | Msa1283100:CDS | 40.0% | |
| GGAACCAAATCCATACATTG+AGG | - | chr8_3:24337722-24337741 | None:intergenic | 40.0% | |
| !! | TAAAAACCATGTCGGTTCCA+TGG | - | chr8_3:24337898-24337917 | None:intergenic | 40.0% |
| CCAAATCCATACATTGACGT+TGG | - | chr8_3:24337790-24337809 | None:intergenic | 40.0% | |
| CCAACGTCAATGTATGGATT+TGG | + | chr8_3:24337787-24337806 | Msa1283100:CDS | 40.0% | |
| !! | AACGTGTTGCTTTCATTTGC+TGG | - | chr8_3:24337959-24337978 | None:intergenic | 40.0% |
| CCAAATCCAAATGTTGAGGT+TGG | - | chr8_3:24337993-24338012 | None:intergenic | 40.0% | |
| CCAACCTCAACATTTGGATT+TGG | + | chr8_3:24337990-24338009 | Msa1283100:intron | 40.0% | |
| GGAACCAAATCCAAATGTTG+AGG | - | chr8_3:24337997-24338016 | None:intergenic | 40.0% | |
| CCAAATCCATACATTGACGT+TGG | - | chr8_3:24337790-24337809 | None:intergenic | 40.0% | |
| CCAACGTCAATGTATGGATT+TGG | + | chr8_3:24337787-24337806 | Msa1283100:CDS | 40.0% | |
| TTGGTTCCATTTCCAGCAAA+TGG | + | chr8_3:24337944-24337963 | Msa1283100:intron | 40.0% | |
| ! | TTGCTTCCATTTGCTGGAAA+TGG | - | chr8_3:24338090-24338109 | None:intergenic | 40.0% |
| CCAAATTAGCAGATTGAGGT+AGG | - | chr8_3:24338266-24338285 | None:intergenic | 40.0% | |
| CCTACCTCAATCTGCTAATT+TGG | + | chr8_3:24338263-24338282 | Msa1283100:CDS | 40.0% | |
| ! | GGCCTAATAACCTTGTTTCT+TGG | - | chr8_3:24338309-24338328 | None:intergenic | 40.0% |
| TCTTCACCTTGTGCACTTTC+TGG | - | chr8_3:24335747-24335766 | None:intergenic | 45.0% | |
| TGGTACTTCACTATTGCAGC+AGG | - | chr8_3:24336068-24336087 | None:intergenic | 45.0% | |
| !! | TCTTTGATGGAAGGAGTGTC+TGG | - | chr8_3:24336405-24336424 | None:intergenic | 45.0% |
| ! | GCATCGACATCTTTGATGGA+AGG | - | chr8_3:24336414-24336433 | None:intergenic | 45.0% |
| !! | AAAAAGGTGTTCCACCACCA+TGG | + | chr8_3:24337150-24337169 | Msa1283100:CDS | 45.0% |
| GCCGCTATTGTGTTATCGAA+AGG | + | chr8_3:24337199-24337218 | Msa1283100:CDS | 45.0% | |
| TCATGAGGTTTCCTATAGGG+TGG | - | chr8_3:24337236-24337255 | None:intergenic | 45.0% | |
| ! | GATGGAAATAATGGAGGACC+AGG | + | chr8_3:24337521-24337540 | Msa1283100:CDS | 45.0% |
| GGACCAGGTAGTTCAAGTAA+TGG | + | chr8_3:24337536-24337555 | Msa1283100:CDS | 45.0% | |
| TGCCCATTACTTGAACTACC+TGG | - | chr8_3:24337542-24337561 | None:intergenic | 45.0% | |
| CCAGGAACACTTGCTTGAAA+AGG | - | chr8_3:24337671-24337690 | None:intergenic | 45.0% | |
| !! | CCTTTTCAAGCAAGTGTTCC+TGG | + | chr8_3:24337668-24337687 | Msa1283100:CDS | 45.0% |
| !! | TCCATCAAATGGAAGCACCA+TGG | + | chr8_3:24337817-24337836 | Msa1283100:CDS | 45.0% |
| ACCATGGTGCTTCCATTTGA+TGG | - | chr8_3:24337821-24337840 | None:intergenic | 45.0% | |
| CCATGGACACTTTCTTGGAA+TGG | - | chr8_3:24337881-24337900 | None:intergenic | 45.0% | |
| !! | CCATTCCAAGAAAGTGTCCA+TGG | + | chr8_3:24337878-24337897 | Msa1283100:CDS | 45.0% |
| CCATGGACACTTTCTTGGAA+TGG | - | chr8_3:24337881-24337900 | None:intergenic | 45.0% | |
| !! | CCATTCCAAGAAAGTGTCCA+TGG | + | chr8_3:24337878-24337897 | Msa1283100:CDS | 45.0% |
| TGGTTCCATGGACACTTTCT+TGG | - | chr8_3:24338023-24338042 | None:intergenic | 45.0% | |
| AAGTGTCCATGGAACCAACA+TGG | + | chr8_3:24338026-24338045 | Msa1283100:intron | 45.0% | |
| TCCAGCAAATGGAAGCAACA+TGG | + | chr8_3:24338092-24338111 | Msa1283100:intron | 45.0% | |
| ! | ACCATGTTGCTTCCATTTGC+TGG | - | chr8_3:24338096-24338115 | None:intergenic | 45.0% |
| TTATTAGGCCAATTGCCACC+AGG | + | chr8_3:24338319-24338338 | Msa1283100:CDS | 45.0% | |
| TGGCTATGATAAGGGCAATG+TGG | - | chr8_3:24338387-24338406 | None:intergenic | 45.0% | |
| CAGCTAGGTGGCTATGATAA+GGG | - | chr8_3:24338395-24338414 | None:intergenic | 45.0% | |
| CTTATCATAGCCACCTAGCT+GGG | + | chr8_3:24338394-24338413 | Msa1283100:CDS | 45.0% | |
| AAGAATGAAACCCAGCTAGG+TGG | - | chr8_3:24338407-24338426 | None:intergenic | 45.0% | |
| CCAAAGAATGAAACCCAGCT+AGG | - | chr8_3:24338410-24338429 | None:intergenic | 45.0% | |
| CCTAGCTGGGTTTCATTCTT+TGG | + | chr8_3:24338407-24338426 | Msa1283100:CDS | 45.0% | |
| AGCTGGGTTTCATTCTTTGG+AGG | + | chr8_3:24338410-24338429 | Msa1283100:CDS | 45.0% | |
| GTAGATCTTGGTCGTGCTGA+TGG | + | chr8_3:24335939-24335958 | Msa1283100:CDS | 50.0% | |
| CACCATTCTTCATCTCCCCT+TGG | - | chr8_3:24337179-24337198 | None:intergenic | 50.0% | |
| CAAGGGGAGATGAAGAATGG+TGG | + | chr8_3:24337177-24337196 | Msa1283100:CDS | 50.0% | |
| TGAGGTTTCCTATAGGGTGG+AGG | - | chr8_3:24337233-24337252 | None:intergenic | 50.0% | |
| AGCGAAGTTAGTGGCCTCTT+GGG | - | chr8_3:24337378-24337397 | None:intergenic | 50.0% | |
| AAGTGTTCCTGGAAGCAGCA+TGG | + | chr8_3:24337679-24337698 | Msa1283100:CDS | 50.0% | |
| CGGTTCCATGGACACTTTCT+TGG | - | chr8_3:24337886-24337905 | None:intergenic | 50.0% | |
| AAGTGTCCATGGAACCGACA+TGG | + | chr8_3:24337889-24337908 | Msa1283100:CDS | 50.0% | |
| CCAGCTAGGTGGCTATGATA+AGG | - | chr8_3:24338396-24338415 | None:intergenic | 50.0% | |
| CCTTATCATAGCCACCTAGC+TGG | + | chr8_3:24338393-24338412 | Msa1283100:CDS | 50.0% | |
| ! | AAGGTGTTCCACCACCATGG+TGG | + | chr8_3:24337153-24337172 | Msa1283100:CDS | 55.0% |
| GGCCAAGGGGAGATGAAGAA+TGG | + | chr8_3:24337174-24337193 | Msa1283100:CDS | 55.0% | |
| ATCCAGGTCCTCCACCCTAT+AGG | + | chr8_3:24337222-24337241 | Msa1283100:CDS | 55.0% | |
| TTCCTATAGGGTGGAGGACC+TGG | - | chr8_3:24337227-24337246 | None:intergenic | 55.0% | |
| GAGCGAAGTTAGTGGCCTCT+TGG | - | chr8_3:24337379-24337398 | None:intergenic | 55.0% | |
| AGAGCGAGGTACGTGGTTAC+TGG | + | chr8_3:24338342-24338361 | Msa1283100:CDS | 55.0% | |
| TTCCACCACCATGGTGGCCA+AGG | + | chr8_3:24337159-24337178 | Msa1283100:CDS | 60.0% | |
| TCCACCACCATGGTGGCCAA+GGG | + | chr8_3:24337160-24337179 | Msa1283100:CDS | 60.0% | |
| TCATCTCCCCTTGGCCACCA+TGG | - | chr8_3:24337170-24337189 | None:intergenic | 60.0% | |
| CTCGCTCTCCTGGTGGCAAT+TGG | - | chr8_3:24338330-24338349 | None:intergenic | 60.0% | |
| CAATTGCCACCAGGAGAGCG+AGG | + | chr8_3:24338328-24338347 | Msa1283100:CDS | 60.0% | |
| AACCACGTACCTCGCTCTCC+TGG | - | chr8_3:24338340-24338359 | None:intergenic | 60.0% | |
| CCACCACCATGGTGGCCAAG+GGG | + | chr8_3:24337161-24337180 | Msa1283100:CDS | 65.0% | |
| TCTCCCCTTGGCCACCATGG+TGG | - | chr8_3:24337167-24337186 | None:intergenic | 65.0% | |
| CACGTACCTCGCTCTCCTGG+TGG | - | chr8_3:24338337-24338356 | None:intergenic | 65.0% | |
| CACCAGGAGAGCGAGGTACG+TGG | + | chr8_3:24338335-24338354 | Msa1283100:CDS | 65.0% | |
| CCCCTTGGCCACCATGGTGG+TGG | - | chr8_3:24337164-24337183 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 24335711 | 24338488 | 24335711 | ID=Msa1283100;Name=Msa1283100 |
| chr8_3 | mRNA | 24335711 | 24338488 | 24335711 | ID=Msa1283100-mRNA-1;Parent=Msa1283100;Name=Msa1283100-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0|0|0.66|1|1|3|0|573 |
| chr8_3 | exon | 24335711 | 24336254 | 24335711 | ID=Msa1283100-mRNA-1:exon:8616;Parent=Msa1283100-mRNA-1 |
| chr8_3 | exon | 24337150 | 24337935 | 24337150 | ID=Msa1283100-mRNA-1:exon:8617;Parent=Msa1283100-mRNA-1 |
| chr8_3 | exon | 24338097 | 24338488 | 24338097 | ID=Msa1283100-mRNA-1:exon:8618;Parent=Msa1283100-mRNA-1 |
| chr8_3 | CDS | 24335711 | 24336254 | 24335711 | ID=Msa1283100-mRNA-1:cds;Parent=Msa1283100-mRNA-1 |
| chr8_3 | CDS | 24337150 | 24337935 | 24337150 | ID=Msa1283100-mRNA-1:cds;Parent=Msa1283100-mRNA-1 |
| chr8_3 | CDS | 24338097 | 24338488 | 24338097 | ID=Msa1283100-mRNA-1:cds;Parent=Msa1283100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
