AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1286600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1286600 MtrunA17_Chr8g0357661 76.068 117 16 1 1 105 33 149 1.44e-56 172
Msa1286600 MtrunA17_Chr8g0357631 79.487 117 12 1 1 105 638 754 3.92e-55 182
Msa1286600 MtrunA17_Chr8g0357651 77.778 117 14 1 1 105 640 756 8.97e-54 178
Msa1286600 MtrunA17_Chr8g0357761 78.632 117 13 1 1 105 650 766 3.33e-53 177
Msa1286600 MtrunA17_Chr8g0357711 76.068 117 16 1 1 105 647 763 4.70e-52 174
Msa1286600 MtrunA17_Chr8g0357831 76.316 114 15 1 1 102 362 475 2.20e-51 168
Msa1286600 MtrunA17_Chr8g0357691 70.940 117 22 1 1 105 648 764 3.21e-48 163
Msa1286600 MtrunA17_Chr8g0357781 60.684 117 34 1 1 105 1 117 2.97e-45 143
Msa1286600 MtrunA17_Chr8g0358061 62.393 117 32 1 1 105 226 342 4.92e-44 146
Msa1286600 MtrunA17_Chr8g0358101 63.248 117 31 1 1 105 634 750 8.56e-44 150
Msa1286600 MtrunA17_Chr8g0358071 63.248 117 31 1 1 105 646 762 1.37e-43 150
Msa1286600 MtrunA17_Chr8g0357981 63.248 117 31 1 1 105 475 591 1.88e-43 149
Msa1286600 MtrunA17_Chr8g0357961 63.248 117 31 1 1 105 654 770 5.40e-43 148
Msa1286600 MtrunA17_Chr8g0358081 61.538 117 33 1 1 105 631 747 5.43e-43 148
Msa1286600 MtrunA17_Chr8g0358141 61.538 117 33 1 1 105 248 364 5.52e-43 144
Msa1286600 MtrunA17_Chr8g0358121 63.248 117 31 1 1 105 632 748 1.22e-42 147
Msa1286600 MtrunA17_Chr8g0358031 64.103 117 30 1 1 105 649 765 1.36e-42 147
Msa1286600 MtrunA17_Chr8g0357991 62.393 117 32 1 1 105 655 771 2.63e-42 146
Msa1286600 MtrunA17_Chr8g0357881 60.684 117 34 1 1 105 646 762 1.06e-41 145
Msa1286600 MtrunA17_Chr8g0357921 55.556 117 40 1 1 105 1 117 2.28e-40 130
Msa1286600 MtrunA17_Chr8g0357871 70.968 93 18 1 1 84 1 93 3.66e-40 129
Msa1286600 MtrunA17_Chr2g0280761 47.863 117 49 1 1 105 1 117 4.72e-33 112
Msa1286600 MtrunA17_Chr4g0048631 51.282 117 45 1 1 105 702 818 4.74e-33 120
Msa1286600 MtrunA17_Chr4g0048801 54.701 117 40 2 1 105 688 803 1.17e-31 116
Msa1286600 MtrunA17_Chr2g0280711 49.573 117 47 1 1 105 700 816 9.88e-30 111
Msa1286600 MtrunA17_Chr4g0048681 47.009 117 49 2 1 105 450 565 9.32e-29 108
Msa1286600 MtrunA17_Chr4g0042401 46.154 117 51 1 1 105 673 789 2.92e-28 107
Msa1286600 MtrunA17_Chr1g0206351 47.009 117 50 1 1 105 523 639 4.76e-28 106
Msa1286600 MtrunA17_Chr4g0042441 45.763 118 51 2 1 105 670 787 6.11e-28 105
Msa1286600 MtrunA17_Chr4g0048581 50.000 116 45 2 1 104 701 815 7.81e-28 105
Msa1286600 MtrunA17_Chr7g0236531 45.299 117 52 1 1 105 208 324 8.22e-28 103
Msa1286600 MtrunA17_Chr4g0048731 48.305 118 46 4 1 105 216 331 9.78e-28 103
Msa1286600 MtrunA17_Chr2g0280691 48.718 117 47 2 1 105 696 811 1.26e-27 105
Msa1286600 MtrunA17_Chr7g0236691 46.154 117 51 1 1 105 670 786 1.33e-27 105
Msa1286600 MtrunA17_Chr8g0354331 47.863 117 49 2 1 105 270 386 1.70e-27 103
Msa1286600 MtrunA17_Chr4g0023111 43.590 117 54 1 1 105 884 1000 1.75e-27 104
Msa1286600 MtrunA17_Chr8g0340051 48.148 108 44 1 1 96 199 306 1.85e-27 102
Msa1286600 MtrunA17_Chr7g0236231 45.763 118 50 3 1 105 688 804 2.43e-27 104
Msa1286600 MtrunA17_Chr4g0048791 47.863 117 48 2 1 105 702 817 2.84e-27 103
Msa1286600 MtrunA17_Chr8g0361141 48.718 117 47 2 1 105 686 801 6.18e-27 103
Msa1286600 MtrunA17_Chr2g0280831 47.009 117 49 2 1 105 265 380 6.44e-27 102
Msa1286600 MtrunA17_Chr2g0280781 44.444 117 53 1 1 105 680 796 6.61e-27 103
Msa1286600 MtrunA17_Chr4g0048661 46.154 117 50 2 1 105 207 322 7.41e-27 100
Msa1286600 MtrunA17_Chr8g0358161 52.381 105 31 1 1 105 216 301 1.04e-26 100
Msa1286600 MtrunA17_Chr7g0236471 43.590 117 54 1 1 105 510 626 1.06e-26 102
Msa1286600 MtrunA17_Chr2g0280801 47.009 117 49 2 1 105 697 812 1.13e-26 102
Msa1286600 MtrunA17_Chr8g0354351 46.154 117 51 1 1 105 503 619 2.68e-26 101
Msa1286600 MtrunA17_Chr3g0081071 48.544 103 41 1 1 91 99 201 2.96e-26 97.4
Msa1286600 MtrunA17_Chr4g0042431 42.735 117 55 1 1 105 1 117 3.01e-26 95.1
Msa1286600 MtrunA17_Chr8g0354391 41.880 117 56 1 1 105 104 220 3.03e-26 97.8
Msa1286600 MtrunA17_Chr2g0280791 47.009 117 49 2 1 105 691 806 3.19e-26 101
Msa1286600 MtrunA17_Chr7g0236551 44.444 117 53 1 1 105 658 774 3.51e-26 100
Msa1286600 MtrunA17_Chr2g0280681 46.610 118 50 2 1 105 671 788 3.77e-26 100
Msa1286600 MtrunA17_Chr5g0426941 49.153 118 46 3 1 105 509 625 3.78e-26 100
Msa1286600 MtrunA17_Chr7g0236561 45.299 117 51 2 1 105 675 790 3.80e-26 100
Msa1286600 MtrunA17_Chr3g0078531 46.154 117 50 2 1 105 697 812 4.03e-26 100
Msa1286600 MtrunA17_Chr4g0055011 43.590 117 54 1 1 105 241 357 4.93e-26 99.4
Msa1286600 MtrunA17_Chr7g0236651 43.590 117 54 1 1 105 655 771 5.02e-26 100
Msa1286600 MtrunA17_Chr4g0048781 44.444 117 52 2 1 105 158 273 5.39e-26 97.8
Msa1286600 MtrunA17_Chr3g0081101 48.485 99 39 1 5 91 12 110 5.44e-26 94.7
Msa1286600 MtrunA17_Chr4g0048711 47.458 118 47 4 1 105 99 214 5.54e-26 99.0
Msa1286600 MtrunA17_Chr4g0048711 46.667 105 44 1 1 93 256 360 4.94e-25 96.3
Msa1286600 MtrunA17_Chr8g0361281 44.444 117 51 3 1 104 683 798 6.29e-26 100
Msa1286600 MtrunA17_Chr3g0081001 43.590 117 54 1 1 105 513 629 7.84e-26 100
Msa1286600 MtrunA17_Chr1g0206331 46.610 118 49 3 1 105 505 621 8.06e-26 99.8
Msa1286600 MtrunA17_Chr4g0042361 47.009 117 49 2 1 105 709 824 9.04e-26 99.8
Msa1286600 MtrunA17_Chr8g0354271 46.610 118 50 2 1 105 505 622 1.04e-25 99.8
Msa1286600 MtrunA17_Chr7g0236121 47.863 117 48 2 1 105 674 789 1.24e-25 99.4
Msa1286600 MtrunA17_Chr7g0236341 44.444 117 52 2 1 105 688 803 1.29e-25 99.4
Msa1286600 MtrunA17_Chr7g0236641 43.590 117 54 1 1 105 695 811 1.29e-25 99.4
Msa1286600 MtrunA17_Chr7g0236201 47.863 117 48 2 1 105 640 755 1.58e-25 99.0
Msa1286600 MtrunA17_Chr7g0236571 44.643 112 50 1 6 105 510 621 1.72e-25 99.0
Msa1286600 MtrunA17_Chr1g0206361 44.167 120 47 2 1 104 513 628 1.81e-25 99.0
Msa1286600 MtrunA17_Chr8g0340081 47.664 107 44 1 1 95 677 783 2.27e-25 98.6
Msa1286600 MtrunA17_Chr3g0081031 47.009 117 50 1 1 105 522 638 2.50e-25 98.6
Msa1286600 MtrunA17_Chr3g0078541 46.154 117 50 2 1 105 700 815 2.65e-25 98.6
Msa1286600 MtrunA17_Chr8g0361161 47.009 117 49 2 1 105 214 329 2.74e-25 97.1
Msa1286600 MtrunA17_Chr3g0081011 43.590 117 54 1 1 105 509 625 2.77e-25 98.6
Msa1286600 MtrunA17_Chr4g0048741 45.299 117 51 2 1 105 702 817 4.90e-25 97.8
Msa1286600 MtrunA17_Chr8g0354281 42.735 117 55 1 1 105 505 621 5.16e-25 97.8
Msa1286600 MtrunA17_Chr3g0082941 43.590 117 54 1 1 105 343 459 5.29e-25 97.4
Msa1286600 MtrunA17_Chr8g0340091 47.664 107 44 1 1 95 702 808 7.58e-25 97.1
Msa1286600 MtrunA17_Chr8g0361341 46.154 117 50 2 1 105 8 123 7.88e-25 91.3
Msa1286600 MtrunA17_Chr8g0354431 43.590 117 54 1 1 105 512 628 1.14e-24 96.7
Msa1286600 MtrunA17_Chr2g0280701 43.590 117 54 1 1 105 670 786 1.42e-24 96.3
Msa1286600 MtrunA17_Chr8g0354421 44.068 118 52 3 1 105 533 649 1.43e-24 96.3
Msa1286600 MtrunA17_Chr5g0394011 44.538 119 52 2 1 105 521 639 1.44e-24 96.3
Msa1286600 MtrunA17_Chr8g0340111 47.664 107 44 1 1 95 675 781 1.60e-24 96.3
Msa1286600 MtrunA17_Chr2g0323231 39.655 116 58 1 1 104 348 463 2.89e-24 95.1
Msa1286600 MtrunA17_Chr3g0093161 43.590 117 53 2 1 105 667 782 4.22e-24 95.1
Msa1286600 MtrunA17_Chr3g0078521 45.299 117 51 2 1 105 689 804 5.50e-24 94.7
Msa1286600 MtrunA17_Chr4g0042351 42.735 117 55 1 1 105 623 739 5.69e-24 94.7
Msa1286600 MtrunA17_Chr4g0048641 45.299 117 51 2 1 105 628 743 5.69e-24 94.7
Msa1286600 MtrunA17_Chr3g0119041 46.154 117 49 3 1 104 510 625 5.88e-24 94.7
Msa1286600 MtrunA17_Chr4g0042341 43.590 117 53 2 1 105 693 808 8.51e-24 94.4
Msa1286600 MtrunA17_Chr8g0340071 46.729 107 45 1 1 95 673 779 8.93e-24 94.0
Msa1286600 MtrunA17_Chr8g0360201 45.299 117 51 2 1 105 576 691 1.09e-23 94.0
Msa1286600 MtrunA17_Chr2g0318831 45.378 119 49 4 1 105 672 788 1.25e-23 93.6
Msa1286600 MtrunA17_Chr1g0206321 39.831 118 58 2 1 105 1 118 1.27e-23 88.6
Msa1286600 MtrunA17_Chr3g0078551 43.590 117 53 2 1 105 694 809 1.47e-23 93.6
Msa1286600 MtrunA17_Chr8g0354441 43.220 118 53 3 1 105 520 636 1.57e-23 93.6
Msa1286600 MtrunA17_Chr3g0092301 41.880 117 55 2 1 105 100 215 2.28e-23 90.1
Msa1286600 MtrunA17_Chr4g0023221 42.735 117 53 2 1 105 900 1014 2.32e-23 92.8
Msa1286600 MtrunA17_Chr1g0154371 44.444 117 52 3 1 105 526 641 3.74e-23 92.4
Msa1286600 MtrunA17_Chr8g0361261 47.863 117 48 2 1 105 707 822 6.56e-23 91.7
Msa1286600 MtrunA17_Chr2g0280751 42.241 116 54 2 1 104 696 810 8.44e-23 91.3
Msa1286600 MtrunA17_Chr1g0206551 43.220 118 53 2 1 105 205 321 8.51e-23 90.1
Msa1286600 MtrunA17_Chr4g0065521 40.870 115 56 1 3 105 209 323 1.05e-22 90.1
Msa1286600 MtrunA17_Chr1g0206561 41.525 118 55 2 1 105 499 615 1.06e-22 90.9
Msa1286600 MtrunA17_Chr4g0042381 41.880 117 56 1 1 105 623 739 1.30e-22 90.9
Msa1286600 MtrunA17_Chr1g0205771 43.802 121 48 3 1 105 513 629 1.35e-22 90.9
Msa1286600 MtrunA17_Chr1g0154311 41.880 117 55 2 1 105 521 636 1.49e-22 90.5
Msa1286600 MtrunA17_Chr8g0361441 41.880 117 55 2 1 105 676 791 1.54e-22 90.5
Msa1286600 MtrunA17_Chr2g0318811 45.378 119 49 4 1 105 670 786 1.61e-22 90.5
Msa1286600 MtrunA17_Chr6g0453561 40.496 121 52 2 1 105 37 153 1.62e-22 86.3
Msa1286600 MtrunA17_Chr1g0154351 41.880 117 55 2 1 105 528 643 2.61e-22 90.1
Msa1286600 MtrunA17_Chr8g0361301 47.009 117 49 2 1 105 676 791 2.98e-22 89.7
Msa1286600 MtrunA17_Chr4g0042391 41.026 117 57 1 1 105 623 739 3.57e-22 89.7
Msa1286600 MtrunA17_Chr5g0428111 41.026 117 56 2 1 105 673 788 4.23e-22 89.4
Msa1286600 MtrunA17_Chr1g0154331 41.026 117 56 2 1 105 209 324 5.34e-22 88.2
Msa1286600 MtrunA17_Chr5g0394001 42.202 109 43 2 1 93 500 604 6.19e-22 89.0
Msa1286600 MtrunA17_Chr2g0280731 42.241 116 54 2 1 104 720 834 6.26e-22 89.0
Msa1286600 MtrunA17_Chr8g0361251 45.299 117 51 2 1 105 676 791 7.80e-22 88.6
Msa1286600 MtrunA17_Chr2g0281241 49.438 89 45 0 1 89 224 312 1.08e-21 86.7
Msa1286600 MtrunA17_Chr2g0318841 44.538 119 50 4 1 105 671 787 1.17e-21 88.2
Msa1286600 MtrunA17_Chr6g0474991 39.831 118 58 2 1 105 33 150 1.36e-21 84.0
Msa1286600 MtrunA17_Chr5g0428581 39.316 117 58 2 1 105 214 329 1.59e-21 87.0
Msa1286600 MtrunA17_Chr4g0065561 40.000 115 57 1 3 105 618 732 1.79e-21 87.4
Msa1286600 MtrunA17_Chr8g0347571 40.171 117 58 1 1 105 740 856 2.11e-21 87.4
Msa1286600 MtrunA17_Chr6g0475091 41.525 118 56 2 1 105 751 868 2.29e-21 87.4
Msa1286600 MtrunA17_Chr6g0474871 39.831 118 58 2 1 105 735 852 6.78e-21 85.9
Msa1286600 MtrunA17_Chr4g0065541 39.130 115 58 1 3 105 610 724 8.23e-21 85.5
Msa1286600 MtrunA17_Chr1g0154321 42.857 105 47 2 1 93 538 641 8.65e-21 85.5
Msa1286600 MtrunA17_Chr1g0206231 41.748 103 40 2 1 87 516 614 9.07e-21 85.5
Msa1286600 MtrunA17_Chr4g0020081 43.590 117 52 3 1 104 681 796 1.13e-20 85.1
Msa1286600 MtrunA17_Chr3g0084661 41.739 115 50 3 1 102 203 313 1.45e-20 84.0
Msa1286600 MtrunA17_Chr3g0084451 43.478 115 49 2 1 102 676 787 1.56e-20 84.7
Msa1286600 MtrunA17_Chr3g0098781 41.525 118 54 3 1 105 81 196 1.56e-20 82.0
Msa1286600 MtrunA17_Chr1g0206461 39.316 117 58 2 1 105 503 618 1.56e-20 84.7
Msa1286600 MtrunA17_Chr1g0206431 39.316 117 58 2 1 105 55 170 1.68e-20 81.6
Msa1286600 MtrunA17_Chr1g0206531 40.171 117 57 2 1 105 507 622 2.18e-20 84.3
Msa1286600 MtrunA17_Chr3g0084631 41.228 114 52 2 1 102 33 143 2.42e-20 80.5
Msa1286600 MtrunA17_Chr6g0475111 42.857 105 48 1 1 93 757 861 2.47e-20 84.3
Msa1286600 MtrunA17_Chr1g0206401 39.655 116 58 1 1 104 520 635 2.89e-20 84.0
Msa1286600 MtrunA17_Chr6g0474901 40.678 118 57 2 1 105 736 853 3.31e-20 84.0
Msa1286600 MtrunA17_Chr6g0475181 38.679 106 60 2 1 105 1 102 3.87e-20 79.0
Msa1286600 MtrunA17_Chr5g0394021 44.737 114 53 3 1 104 491 604 4.16e-20 83.6
Msa1286600 MtrunA17_Chr6g0474811 38.983 118 59 2 1 105 743 860 4.47e-20 83.6
Msa1286600 MtrunA17_Chr8g0357901 67.241 58 19 0 1 58 18 75 5.16e-20 77.4
Msa1286600 MtrunA17_Chr5g0422921 39.316 117 58 2 1 105 668 783 6.37e-20 83.2
Msa1286600 MtrunA17_Chr1g0206521 40.171 117 57 2 1 105 1147 1262 6.59e-20 83.2
Msa1286600 MtrunA17_Chr1g0206521 40.171 117 57 2 1 105 505 620 8.56e-20 82.8
Msa1286600 MtrunA17_Chr1g0206391 38.793 116 59 1 1 104 210 325 8.63e-20 82.0
Msa1286600 MtrunA17_Chr3g0084431 41.739 115 50 3 1 102 664 774 9.76e-20 82.8
Msa1286600 MtrunA17_Chr5g0428101 40.171 117 57 2 1 105 671 786 1.33e-19 82.4
Msa1286600 MtrunA17_Chr3g0084691 42.609 115 50 2 1 102 692 803 2.49e-19 81.6
Msa1286600 MtrunA17_Chr6g0474861 38.983 118 59 2 1 105 456 573 2.70e-19 81.3
Msa1286600 MtrunA17_Chr1g0206261 39.831 118 57 3 1 105 258 374 3.24e-19 80.9
Msa1286600 MtrunA17_Chr3g0084441 41.739 115 51 2 1 102 676 787 3.53e-19 80.9
Msa1286600 MtrunA17_Chr5g0393981 40.336 119 55 5 1 105 566 682 4.04e-19 80.9
Msa1286600 MtrunA17_Chr6g0475201 37.705 122 55 2 1 105 744 861 5.76e-19 80.5
Msa1286600 MtrunA17_Chr3g0084411 41.739 115 50 3 1 102 669 779 6.63e-19 80.1
Msa1286600 MtrunA17_Chr6g0475131 36.885 122 56 2 1 105 179 296 6.65e-19 79.3
Msa1286600 MtrunA17_Chr3g0084491 41.739 115 51 2 1 102 676 787 8.06e-19 80.1
Msa1286600 MtrunA17_Chr3g0084421 41.228 114 52 2 1 102 632 742 1.20e-18 79.3
Msa1286600 MtrunA17_Chr8g0361431 40.952 105 50 1 1 93 654 758 1.48e-18 79.3
Msa1286600 MtrunA17_Chr7g0236511 41.837 98 45 1 20 105 669 766 3.17e-18 78.2
Msa1286600 MtrunA17_Chr7g0236161 41.905 105 53 2 1 105 640 736 4.27e-18 77.8
Msa1286600 MtrunA17_Chr1g0206421 37.719 114 62 1 1 105 398 511 4.48e-18 77.8
Msa1286600 MtrunA17_Chr6g0474851 38.136 118 60 2 1 105 98 215 6.42e-18 75.9
Msa1286600 MtrunA17_Chr3g0084681 40.870 115 52 3 1 102 634 745 7.37e-18 77.4
Msa1286600 MtrunA17_Chr8g0359581 39.806 103 51 2 1 96 83 181 1.91e-17 73.2
Msa1286600 MtrunA17_Chr2g0312561 38.655 119 58 4 1 105 212 329 2.36e-17 75.5
Msa1286600 MtrunA17_Chr1g0206451 41.414 99 45 2 1 87 542 639 3.93e-17 75.1
Msa1286600 MtrunA17_Chr1g0206221 38.144 97 40 2 7 87 1 93 5.04e-17 71.2
Msa1286600 MtrunA17_Chr2g0312571 39.496 119 57 4 1 105 217 334 6.44e-17 74.3
Msa1286600 MtrunA17_Chr8g0358781 37.931 116 59 3 1 104 511 625 7.17e-17 74.3
Msa1286600 MtrunA17_Chr2g0314861 39.091 110 55 1 1 98 89 198 8.37e-17 73.2
Msa1286600 MtrunA17_Chr4g0071371 37.607 117 60 3 2 105 305 421 1.24e-16 73.6
Msa1286600 MtrunA17_Chr2g0314841 39.091 110 55 1 1 98 830 939 1.26e-16 73.9
Msa1286600 MtrunA17_Chr2g0314821 39.091 110 55 1 1 98 833 942 1.82e-16 73.2
Msa1286600 MtrunA17_Chr8g0359691 37.615 109 56 1 1 97 833 941 2.41e-16 72.8
Msa1286600 MtrunA17_Chr8g0359641 38.532 109 55 1 1 97 836 944 3.16e-16 72.8
Msa1286600 MtrunA17_Chr8g0358821 35.043 117 63 2 1 105 856 971 3.29e-16 72.4
Msa1286600 MtrunA17_Chr2g0315081 36.697 109 57 1 1 97 823 931 3.52e-16 72.4
Msa1286600 MtrunA17_Chr5g0413171 41.322 121 54 4 1 104 256 376 6.49e-16 71.6
Msa1286600 MtrunA17_Chr2g0314881 40.909 110 53 1 1 98 398 507 7.36e-16 71.6
Msa1286600 MtrunA17_Chr2g0299041 36.364 121 56 3 2 105 283 399 8.37e-16 71.2
Msa1286600 MtrunA17_Chr1g0181341 40.741 108 45 2 1 93 217 320 8.54e-16 71.2
Msa1286600 MtrunA17_Chr7g0226891 37.391 115 60 3 1 104 218 331 9.96e-16 70.9
Msa1286600 MtrunA17_Chr8g0359651 37.615 109 56 1 1 97 836 944 1.04e-15 71.2
Msa1286600 MtrunA17_Chr2g0314991 36.697 109 57 1 1 97 1346 1454 1.40e-15 70.9
Msa1286600 MtrunA17_Chr2g0314991 36.697 109 57 1 1 97 380 488 1.28e-14 68.2
Msa1286600 MtrunA17_Chr8g0358911 36.364 110 58 2 1 98 215 324 5.08e-15 68.9
Msa1286600 MtrunA17_Chr8g0379931 37.391 115 59 2 1 102 876 990 5.27e-15 69.3
Msa1286600 MtrunA17_Chr2g0315151 36.036 111 59 1 1 99 835 945 5.47e-15 68.9
Msa1286600 MtrunA17_Chr5g0438071 34.821 112 61 1 1 100 829 940 6.51e-15 68.9
Msa1286600 MtrunA17_Chr2g0315061 36.697 109 57 2 1 97 206 314 7.97e-15 68.6
Msa1286600 MtrunA17_Chr2g0314961 37.864 103 52 2 1 91 305 407 1.34e-14 67.8
Msa1286600 MtrunA17_Chr2g0314911 37.864 103 52 1 1 91 831 933 1.38e-14 67.8
Msa1286600 MtrunA17_Chr5g0443531 34.188 117 65 1 1 105 847 963 1.49e-14 67.8
Msa1286600 MtrunA17_Chr8g0357931 57.143 63 15 1 8 58 564 626 2.63e-14 67.0
Msa1286600 MtrunA17_Chr2g0314901 38.835 103 51 2 1 91 838 940 5.02e-14 66.2
Msa1286600 MtrunA17_Chr4g0047561 37.273 110 56 3 1 98 216 324 7.63e-14 65.5
Msa1286600 MtrunA17_Chr8g0354291 60.465 43 17 0 49 91 15 57 1.01e-13 61.6
Msa1286600 MtrunA17_Chr4g0072901 36.792 106 55 2 1 94 211 316 1.05e-13 65.1
Msa1286600 MtrunA17_Chr8g0357911 72.093 43 12 0 1 43 75 117 1.59e-13 61.6
Msa1286600 MtrunA17_Chr3g0109411 33.945 109 53 2 2 94 494 599 1.76e-13 64.7
Msa1286600 MtrunA17_Chr2g0281971 33.333 114 55 3 1 98 218 326 2.14e-13 64.3
Msa1286600 MtrunA17_Chr2g0333181 36.607 112 59 2 1 100 209 320 4.27e-13 63.5
Msa1286600 MtrunA17_Chr6g0484231 32.479 117 66 2 1 105 218 333 4.60e-13 63.5
Msa1286600 MtrunA17_Chr8g0376131 32.727 110 54 2 1 94 221 326 4.74e-13 63.5
Msa1286600 MtrunA17_Chr1g0160921 39.252 107 52 3 1 94 220 326 5.25e-13 63.2
Msa1286600 MtrunA17_Chr2g0315011 33.333 114 61 2 1 102 9 119 7.60e-13 61.2
Msa1286600 MtrunA17_Chr8g0365701 37.273 110 47 3 1 91 21 127 8.48e-13 61.6
Msa1286600 MtrunA17_Chr8g0389251 32.710 107 60 2 1 95 572 678 2.91e-12 61.2
Msa1286600 MtrunA17_Chr3g0144481 33.333 117 61 3 1 100 256 372 3.05e-12 61.2
Msa1286600 MtrunA17_Chr3g0125281 37.383 107 55 1 1 95 577 683 4.59e-12 60.8
Msa1286600 MtrunA17_Chr5g0428511 39.344 61 35 2 46 105 11 70 6.48e-12 57.4
Msa1286600 MtrunA17_Chr6g0485721 33.621 116 59 2 1 100 265 378 6.55e-12 60.1
Msa1286600 MtrunA17_Chr7g0273311 38.384 99 53 2 1 91 89 187 7.62e-12 58.9
Msa1286600 MtrunA17_Chr3g0109431 31.667 120 62 3 2 104 497 613 1.20e-11 59.7
Msa1286600 MtrunA17_Chr2g0306811 32.231 121 62 2 1 101 278 398 1.20e-11 59.3
Msa1286600 MtrunA17_Chr5g0439701 36.697 109 51 2 1 91 476 584 1.48e-11 59.3
Msa1286600 MtrunA17_Chr7g0242201 33.636 110 60 2 1 98 213 321 1.66e-11 58.9
Msa1286600 MtrunA17_Chr8g0341881 32.727 110 62 2 1 98 573 682 2.26e-11 58.9
Msa1286600 MtrunA17_Chr3g0123891 35.849 106 52 3 1 91 456 560 3.95e-11 58.2
Msa1286600 MtrunA17_Chr4g0048571 36.667 90 44 2 1 77 106 195 4.23e-11 57.0
Msa1286600 MtrunA17_Chr2g0330471 33.981 103 56 2 1 91 575 677 5.00e-11 57.8
Msa1286600 MtrunA17_Chr2g0320111 31.897 116 66 2 1 103 267 382 7.96e-11 57.0
Msa1286600 MtrunA17_Chr3g0109461 30.909 110 56 2 2 94 509 615 8.33e-11 57.0
Msa1286600 MtrunA17_Chr8g0358901 36.275 102 60 2 1 98 237 337 9.26e-11 57.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1286600 AT1G65790.1 48.760 121 46 2 1 105 688 808 9.81e-31 114
Msa1286600 AT1G65800.1 47.934 121 47 2 1 105 692 812 2.75e-30 113
Msa1286600 AT4G23290.2 49.153 118 47 2 1 105 532 649 4.92e-30 112
Msa1286600 AT4G21380.1 48.333 120 47 2 1 105 695 814 5.02e-30 112
Msa1286600 AT4G23290.1 49.153 118 47 2 1 105 489 606 5.11e-30 112
Msa1286600 AT4G23180.1 47.009 117 50 1 1 105 517 633 8.53e-29 108
Msa1286600 AT4G11470.1 46.610 118 50 2 1 105 508 625 9.85e-29 108
Msa1286600 AT4G11470.2 46.610 118 50 2 1 105 513 630 1.08e-28 108
Msa1286600 AT4G23270.3 48.305 118 48 2 1 105 495 612 1.14e-28 108
Msa1286600 AT4G23270.2 48.305 118 48 2 1 105 495 612 1.17e-28 108
Msa1286600 AT4G23270.1 48.305 118 48 2 1 105 495 612 1.17e-28 108
Msa1286600 AT1G11410.3 49.153 118 45 2 1 105 668 783 2.19e-28 107
Msa1286600 AT1G11410.1 49.153 118 45 2 1 105 692 807 2.24e-28 107
Msa1286600 AT1G11410.4 49.153 118 45 2 1 105 699 814 2.24e-28 107
Msa1286600 AT1G11410.2 49.153 118 45 2 1 105 577 692 2.78e-28 107
Msa1286600 AT4G11530.1 47.458 118 49 2 1 105 521 638 3.07e-28 107
Msa1286600 AT4G11480.3 47.458 118 49 2 1 105 493 610 8.41e-28 105
Msa1286600 AT4G11480.1 47.458 118 49 2 1 105 498 615 9.13e-28 105
Msa1286600 AT4G11480.4 47.458 118 49 2 1 105 490 607 9.53e-28 105
Msa1286600 AT4G11460.2 47.458 118 49 2 1 105 440 557 1.08e-27 105
Msa1286600 AT4G11460.3 47.458 118 49 2 1 105 515 632 1.13e-27 105
Msa1286600 AT4G11460.1 47.458 118 49 2 1 105 518 635 1.13e-27 105
Msa1286600 AT4G23310.2 45.763 118 51 2 1 105 637 754 1.35e-27 105
Msa1286600 AT4G23310.1 45.763 118 51 2 1 105 677 794 1.44e-27 105
Msa1286600 AT4G23130.1 45.763 118 51 2 1 105 509 626 1.90e-27 105
Msa1286600 AT4G23130.2 45.763 118 51 2 1 105 513 630 1.98e-27 104
Msa1286600 AT4G23240.2 47.458 118 49 2 1 105 197 314 2.36e-27 102
Msa1286600 AT3G45860.1 47.059 119 49 2 1 105 520 638 2.57e-27 104
Msa1286600 AT1G11340.1 48.305 118 46 2 1 105 684 799 6.56e-27 103
Msa1286600 AT4G23260.1 48.305 118 48 2 1 105 508 625 7.88e-27 103
Msa1286600 AT4G23150.1 47.863 117 49 1 1 105 505 621 8.60e-27 103
Msa1286600 AT3G16030.1 50.000 120 45 4 1 105 696 815 9.50e-27 102
Msa1286600 AT3G16030.2 50.000 120 45 4 1 105 573 692 9.95e-27 102
Msa1286600 AT3G16030.6 50.000 120 45 4 1 105 717 836 1.09e-26 102
Msa1286600 AT4G23320.2 46.610 118 50 2 1 105 352 469 1.45e-26 102
Msa1286600 AT4G23320.1 46.610 118 50 2 1 105 352 469 1.45e-26 102
Msa1286600 AT4G23320.3 46.610 118 50 2 1 105 373 490 1.46e-26 102
Msa1286600 AT4G23240.1 47.458 118 49 2 1 105 504 621 1.54e-26 102
Msa1286600 AT4G23260.2 48.305 118 48 2 1 105 497 614 1.76e-26 102
Msa1286600 AT4G23280.3 45.763 118 51 2 1 105 463 580 2.05e-26 102
Msa1286600 AT4G23280.1 45.763 118 51 2 1 105 513 630 2.94e-26 101
Msa1286600 AT4G23280.2 45.763 118 51 2 1 105 511 628 3.37e-26 101
Msa1286600 AT1G11350.1 46.154 117 51 1 1 105 681 797 5.83e-26 100
Msa1286600 AT4G23230.1 44.444 117 53 1 1 105 506 622 9.38e-26 100
Msa1286600 AT4G03230.2 44.068 118 53 2 1 105 759 876 1.01e-25 100
Msa1286600 AT4G03230.6 44.068 118 53 2 1 105 759 876 1.01e-25 100
Msa1286600 AT4G03230.5 44.068 118 53 2 1 105 787 904 1.02e-25 100
Msa1286600 AT4G03230.8 44.068 118 53 2 1 105 701 818 1.07e-25 100
Msa1286600 AT4G23140.1 45.299 117 52 1 1 105 520 636 1.09e-25 100
Msa1286600 AT4G23140.2 45.299 117 52 1 1 105 526 642 1.15e-25 99.8
Msa1286600 AT4G03230.3 44.068 118 53 2 1 105 694 811 1.16e-25 99.8
Msa1286600 AT4G03230.4 44.068 118 53 2 1 105 859 976 1.16e-25 99.8
Msa1286600 AT4G03230.1 44.068 118 53 2 1 105 859 976 1.16e-25 99.8
Msa1286600 AT4G03230.7 44.068 118 53 2 1 105 702 819 1.20e-25 99.8
Msa1286600 AT4G21390.1 45.299 117 51 2 1 105 698 813 1.44e-25 99.8
Msa1286600 AT4G23160.1 45.299 117 52 1 1 105 528 644 1.54e-25 99.4
Msa1286600 AT4G23250.2 47.458 118 49 2 1 105 523 640 2.17e-25 99.0
Msa1286600 AT4G23300.1 46.296 108 43 2 1 93 522 629 2.42e-25 99.0
Msa1286600 AT1G11330.2 46.154 117 51 1 1 105 693 809 2.53e-25 99.0
Msa1286600 AT4G00970.1 46.610 118 50 2 1 105 515 632 2.70e-25 99.0
Msa1286600 AT1G11330.1 46.154 117 51 1 1 105 691 807 2.71e-25 99.0
Msa1286600 AT4G23190.1 43.333 120 53 2 1 105 519 638 3.25e-25 98.6
Msa1286600 AT4G23190.3 43.333 120 53 2 1 105 441 560 3.37e-25 98.6
Msa1286600 AT4G23190.4 43.333 120 53 2 1 105 441 560 3.37e-25 98.6
Msa1286600 AT1G67520.3 48.333 120 47 4 1 105 665 784 3.91e-25 98.6
Msa1286600 AT1G67520.6 48.333 120 47 4 1 105 672 791 3.95e-25 98.2
Msa1286600 AT4G23200.1 43.220 118 54 2 1 105 505 622 7.28e-25 97.4
Msa1286600 AT4G23250.3 47.458 118 49 2 1 105 523 640 9.39e-25 97.4
Msa1286600 AT4G23250.1 47.458 118 49 2 1 105 528 645 9.71e-25 97.4
Msa1286600 AT1G67520.5 48.333 120 47 4 1 105 428 547 1.60e-24 96.7
Msa1286600 AT1G67520.4 48.333 120 47 4 1 105 622 741 1.69e-24 96.7
Msa1286600 AT1G67520.8 48.333 120 47 4 1 105 457 576 1.82e-24 96.3
Msa1286600 AT1G67520.7 48.333 120 47 4 1 105 457 576 1.82e-24 96.3
Msa1286600 AT4G21366.1 45.794 107 38 2 1 88 1 106 2.70e-24 89.4
Msa1286600 AT4G05200.2 41.739 115 55 1 1 103 534 648 4.02e-24 95.5
Msa1286600 AT4G05200.1 41.739 115 55 1 1 103 516 630 4.20e-24 95.5
Msa1286600 AT1G11300.1 42.982 114 52 2 1 105 678 787 1.82e-23 93.6
Msa1286600 AT4G00960.2 44.068 118 53 2 1 105 133 250 3.58e-23 90.5
Msa1286600 AT4G00960.3 44.068 118 53 2 1 105 140 257 4.19e-23 90.5
Msa1286600 AT1G11300.2 42.982 114 52 2 1 105 663 772 4.89e-23 92.4
Msa1286600 AT1G61610.1 41.379 116 55 2 1 104 694 808 7.74e-23 92.0
Msa1286600 AT4G00960.1 44.068 118 53 2 1 105 227 344 1.29e-22 90.5
Msa1286600 AT4G27290.2 46.535 101 41 2 1 88 680 780 1.51e-22 90.9
Msa1286600 AT4G27290.1 46.535 101 41 2 1 88 634 734 1.71e-22 90.9
Msa1286600 AT4G38830.1 43.697 119 53 2 1 105 514 632 7.61e-22 89.0
Msa1286600 AT4G11490.1 41.026 117 56 2 1 104 490 606 8.77e-22 89.0
Msa1286600 AT4G11900.9 39.316 117 58 2 1 105 637 752 9.09e-22 89.0
Msa1286600 AT4G11900.1 39.316 117 58 2 1 105 706 821 9.14e-22 89.0
Msa1286600 AT4G23220.1 40.678 118 57 2 1 105 505 622 1.06e-21 88.6
Msa1286600 AT4G23210.3 41.525 118 51 2 1 104 527 640 1.15e-21 88.6
Msa1286600 AT1G11303.1 41.228 114 54 2 1 105 678 787 1.17e-21 88.6
Msa1286600 AT1G11280.3 42.373 118 53 3 1 104 662 778 2.46e-21 87.4
Msa1286600 AT1G11280.2 42.373 118 53 3 1 104 674 790 2.48e-21 87.4
Msa1286600 AT1G11280.1 42.373 118 53 3 1 104 684 800 2.74e-21 87.4
Msa1286600 AT1G11280.4 42.373 118 53 3 1 104 672 788 2.96e-21 87.4
Msa1286600 AT4G04490.1 49.000 100 42 3 1 92 509 607 3.00e-21 87.4
Msa1286600 AT4G04570.1 43.590 117 49 3 1 105 517 628 5.01e-21 86.7
Msa1286600 AT4G21410.3 40.650 123 50 3 1 105 528 645 6.05e-21 86.3
Msa1286600 AT1G61370.2 41.379 116 55 2 1 104 519 633 6.72e-21 86.3
Msa1286600 AT4G04540.1 43.590 117 49 3 1 105 522 633 7.54e-21 86.3
Msa1286600 AT4G21410.1 40.650 123 50 3 1 105 403 520 8.08e-21 85.9
Msa1286600 AT1G61370.1 41.379 116 55 2 1 104 670 784 9.87e-21 85.9
Msa1286600 AT4G04540.4 44.248 113 54 2 1 105 493 604 1.09e-20 85.9
Msa1286600 AT4G21400.1 40.336 119 56 2 1 105 532 649 1.89e-20 85.1
Msa1286600 AT4G21400.2 40.336 119 56 2 1 105 520 637 1.90e-20 85.1
Msa1286600 AT4G21400.7 40.336 119 56 2 1 105 522 639 2.02e-20 85.1
Msa1286600 AT1G61380.2 42.241 116 54 2 1 104 510 624 2.28e-20 84.7
Msa1286600 AT1G61380.1 42.241 116 54 2 1 104 657 771 2.53e-20 84.7
Msa1286600 AT1G61440.3 43.802 121 47 3 1 105 652 767 2.76e-20 84.7
Msa1286600 AT1G61440.1 43.802 121 47 3 1 105 647 762 2.79e-20 84.7
Msa1286600 AT1G61440.2 43.802 121 47 3 1 105 677 792 3.05e-20 84.3
Msa1286600 AT4G27300.1 43.119 109 39 2 1 91 669 772 3.08e-20 84.3
Msa1286600 AT4G21400.8 40.336 119 56 2 1 105 421 538 3.18e-20 84.3
Msa1286600 AT1G61430.9 43.802 121 47 3 1 105 658 773 5.35e-20 83.6
Msa1286600 AT1G61430.1 43.802 121 47 3 1 105 661 776 5.62e-20 83.6
Msa1286600 AT1G61430.11 43.802 121 47 3 1 105 635 750 5.83e-20 83.6
Msa1286600 AT1G61430.12 43.802 121 47 3 1 105 635 750 5.83e-20 83.6
Msa1286600 AT1G61430.13 43.802 121 47 3 1 105 635 750 5.83e-20 83.6
Msa1286600 AT1G61400.2 43.590 117 53 2 1 105 677 792 1.47e-19 82.4
Msa1286600 AT1G61400.1 43.590 117 53 2 1 105 669 784 1.62e-19 82.4
Msa1286600 AT4G21230.1 39.823 113 57 1 1 102 502 614 1.84e-19 82.0
Msa1286600 AT1G61550.1 42.735 117 54 2 1 105 658 773 5.46e-19 80.9
Msa1286600 AT1G53440.1 41.284 109 52 1 1 97 836 944 8.84e-19 80.5
Msa1286600 AT1G53430.2 41.284 109 52 1 1 97 797 905 1.46e-18 79.7
Msa1286600 AT1G53430.1 41.284 109 52 1 1 97 838 946 1.54e-18 79.7
Msa1286600 AT1G61390.2 42.982 114 54 2 1 104 521 633 2.45e-18 79.0
Msa1286600 AT1G61390.1 42.982 114 54 2 1 104 689 801 2.89e-18 79.0
Msa1286600 AT1G61490.3 41.379 116 55 2 1 104 509 623 1.40e-17 77.0
Msa1286600 AT1G61360.1 41.803 122 42 5 1 102 667 779 1.87e-17 76.6
Msa1286600 AT1G61500.3 40.000 120 51 3 1 104 665 779 1.94e-17 76.6
Msa1286600 AT1G61360.2 41.803 122 42 5 1 102 586 698 2.06e-17 76.3
Msa1286600 AT1G61360.3 41.803 122 42 5 1 102 586 698 2.06e-17 76.3
Msa1286600 AT1G61360.4 41.803 122 42 5 1 102 586 698 2.06e-17 76.3
Msa1286600 AT1G61490.6 41.026 117 56 2 1 105 633 748 2.09e-17 76.3
Msa1286600 AT1G61490.7 41.026 117 56 2 1 105 633 748 2.09e-17 76.3
Msa1286600 AT1G61500.1 40.000 120 51 3 1 104 660 774 2.09e-17 76.3
Msa1286600 AT1G61490.4 41.026 117 56 2 1 105 659 774 2.13e-17 76.3
Msa1286600 AT1G61490.1 41.026 117 56 2 1 105 659 774 2.13e-17 76.3
Msa1286600 AT1G61490.2 41.026 117 56 2 1 105 659 774 2.13e-17 76.3
Msa1286600 AT1G61490.5 41.026 117 56 2 1 105 659 774 2.13e-17 76.3
Msa1286600 AT1G61500.2 40.000 120 51 3 1 104 642 756 2.17e-17 76.3
Msa1286600 AT4G28670.1 37.931 116 60 1 1 104 503 618 3.68e-17 75.5
Msa1286600 AT1G70530.1 37.391 115 59 3 1 104 491 603 3.99e-17 75.5
Msa1286600 AT1G61420.1 41.346 104 49 1 1 92 663 766 6.47e-17 75.1
Msa1286600 AT1G61420.2 41.346 104 49 1 1 92 665 768 6.47e-17 75.1
Msa1286600 AT1G61420.4 41.346 104 49 1 1 92 665 768 6.47e-17 75.1
Msa1286600 AT3G14840.2 39.640 111 55 2 1 99 841 951 7.02e-17 74.7
Msa1286600 AT1G61420.3 41.346 104 49 1 1 92 513 616 7.09e-17 74.7
Msa1286600 AT1G61420.5 41.346 104 49 1 1 92 515 618 7.30e-17 74.7
Msa1286600 AT1G61480.1 38.793 116 58 2 1 104 665 779 8.49e-17 74.7
Msa1286600 AT4G04510.1 38.938 113 53 3 1 101 508 616 4.86e-16 72.4
Msa1286600 AT4G04510.2 38.938 113 53 3 1 101 510 618 4.86e-16 72.4
Msa1286600 AT1G70740.1 38.182 110 48 2 1 94 230 335 7.24e-16 72.0
Msa1286600 AT1G07650.4 35.897 117 63 1 1 105 635 751 8.67e-16 71.6
Msa1286600 AT1G07650.2 35.897 117 63 1 1 105 854 970 9.70e-16 71.6
Msa1286600 AT1G07650.3 35.897 117 63 1 1 105 822 938 9.87e-16 71.6
Msa1286600 AT1G07650.1 35.897 117 63 1 1 105 848 964 9.89e-16 71.6
Msa1286600 AT1G53420.1 36.937 111 58 2 1 99 793 903 1.56e-15 70.9
Msa1286600 AT4G04500.1 36.522 115 53 2 1 97 514 626 5.47e-15 69.3
Msa1286600 AT1G16670.1 37.273 110 57 2 1 98 212 321 7.81e-15 68.9
Msa1286600 AT1G70740.2 34.426 122 48 2 1 94 218 335 2.84e-14 67.4
Msa1286600 AT5G40380.1 37.615 109 53 2 1 94 483 591 6.29e-14 66.6
Msa1286600 AT1G56145.2 34.711 121 58 3 1 105 881 996 9.76e-14 65.9
Msa1286600 AT1G56145.1 35.897 117 62 2 1 105 854 969 1.02e-13 65.9
Msa1286600 AT1G56145.3 35.897 117 62 2 1 105 751 866 1.32e-13 65.5
Msa1286600 AT3G05140.1 33.636 110 65 2 2 103 312 421 4.24e-13 63.9
Msa1286600 AT1G29730.2 31.356 118 68 1 1 105 840 957 5.24e-13 63.9
Msa1286600 AT1G29730.1 31.356 118 68 1 1 105 808 925 5.44e-13 63.9
Msa1286600 AT1G55200.3 34.951 103 55 1 1 91 547 649 6.45e-13 63.5
Msa1286600 AT1G55200.4 34.951 103 55 1 1 91 547 649 6.45e-13 63.5
Msa1286600 AT1G55200.1 34.951 103 55 1 1 91 547 649 6.45e-13 63.5
Msa1286600 AT1G55200.2 34.951 103 55 1 1 91 547 649 6.45e-13 63.5
Msa1286600 AT3G05140.2 33.636 110 65 2 2 103 360 469 7.70e-13 63.2
Msa1286600 AT1G56140.1 35.043 117 63 2 1 105 860 975 1.44e-12 62.8
Msa1286600 AT5G38560.1 37.383 107 51 2 1 91 508 614 1.45e-12 62.4
Msa1286600 AT1G70520.1 36.066 122 60 3 1 104 493 614 1.56e-12 62.4
Msa1286600 AT5G18910.1 33.036 112 66 3 1 103 359 470 4.71e-12 61.2
Msa1286600 AT1G29720.1 29.915 117 70 1 1 105 840 956 5.86e-12 60.8
Msa1286600 AT3G09010.1 36.792 106 54 2 1 94 215 319 5.90e-12 60.8
Msa1286600 AT3G13690.2 33.636 110 61 2 1 98 579 688 5.98e-12 60.8
Msa1286600 AT3G13690.1 33.636 110 61 2 1 98 579 688 5.98e-12 60.8
Msa1286600 AT3G13690.3 33.636 110 61 2 1 98 579 688 5.98e-12 60.8
Msa1286600 AT1G56120.3 34.188 117 64 2 1 105 711 826 6.10e-12 60.8
Msa1286600 AT1G56120.1 34.188 117 64 2 1 105 877 992 6.79e-12 60.8
Msa1286600 AT1G56120.2 32.231 121 61 3 1 105 859 974 7.33e-12 60.5
Msa1286600 AT1G56130.2 32.479 117 66 2 1 105 861 976 1.92e-11 59.3
Msa1286600 AT1G29750.1 36.893 103 53 2 1 91 835 937 2.29e-11 59.3
Msa1286600 AT1G11340.3 61.224 49 17 1 1 49 752 798 2.79e-11 58.9
Msa1286600 AT2G45340.1 36.735 98 55 2 1 93 591 686 3.63e-11 58.5
Msa1286600 AT1G56130.3 32.479 117 66 2 1 105 662 777 4.09e-11 58.5
Msa1286600 AT1G56130.1 32.479 117 66 2 1 105 713 828 4.19e-11 58.5
Msa1286600 AT1G29750.2 36.893 103 53 2 1 91 850 952 4.26e-11 58.5
Msa1286600 AT1G29740.1 37.143 105 51 2 1 91 844 947 4.40e-11 58.5
Msa1286600 AT1G52540.2 37.288 118 60 3 1 104 205 322 4.41e-11 58.2
Msa1286600 AT1G52540.1 36.441 118 61 3 1 104 208 325 4.48e-11 58.2
Msa1286600 AT1G29740.2 37.143 105 51 2 1 91 844 947 4.93e-11 58.2
Msa1286600 AT5G56790.1 33.645 107 59 2 1 95 558 664 5.04e-11 58.2
Msa1286600 AT3G24540.1 34.821 112 55 4 1 95 350 460 5.64e-11 58.2
Msa1286600 AT4G23180.2 59.184 49 20 0 1 49 517 565 6.04e-11 57.8
Msa1286600 AT3G46760.1 34.483 116 61 3 1 104 208 320 8.30e-11 57.4

Find 15 sgRNAs with CRISPR-Local

Find 27 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATACTATGCTGGTTTCTT+AGG 0.185908 8_3:+34816892 None:intergenic
ACACCTTCCATAGCATATTC+TGG 0.343516 8_3:+34817317 None:intergenic
GTTAACAAACAAAGTTAAAG+TGG 0.473778 8_3:-34816923 Msa1286600:CDS
GACAGACCACTTAATCTAGT+AGG 0.521186 8_3:-34817206 Msa1286600:CDS
GTGCTAAGATGTGTTCATGT+TGG 0.538255 8_3:-34817006 Msa1286600:CDS
GATATAACACTGGACATGGT+GGG 0.539352 8_3:+34816949 None:intergenic
ACATGTCCTACTAGATTAAG+TGG 0.542691 8_3:+34817200 None:intergenic
CATTGATATAACACTGGACA+TGG 0.542847 8_3:+34816945 None:intergenic
TGATATAACACTGGACATGG+TGG 0.556849 8_3:+34816948 None:intergenic
CATGTCTCCAGAATATGCTA+TGG 0.565904 8_3:-34817324 Msa1286600:CDS
TGTTAACATTGATATAACAC+TGG 0.571545 8_3:+34816939 None:intergenic
ATATAACACTGGACATGGTG+GGG 0.611107 8_3:+34816950 None:intergenic
TCTCCAGAATATGCTATGGA+AGG 0.612228 8_3:-34817320 Msa1286600:CDS
GAAAACGACTCATTTAGCGA+CGG 0.708875 8_3:+34817039 None:intergenic
TTGCTCCTTGAAAATAACAG+TGG 0.767192 8_3:-34817257 Msa1286600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGTTTTATGTATACAGCTT+TGG - chr8_3:34816946-34816965 Msa1286600:CDS 25.0%
! AAAACAATCATTGATGTCAT+AGG - chr8_3:34817124-34817143 Msa1286600:intron 25.0%
! TGTTAACATTGATATAACAC+TGG + chr8_3:34817294-34817313 None:intergenic 25.0%
! GTTAACAAACAAAGTTAAAG+TGG - chr8_3:34817307-34817326 Msa1286600:CDS 25.0%
!!! TTTCACCACTGTTATTTTCA+AGG + chr8_3:34816981-34817000 None:intergenic 30.0%
TTGCTCCTTGAAAATAACAG+TGG - chr8_3:34816973-34816992 Msa1286600:CDS 35.0%
ACATGTCCTACTAGATTAAG+TGG + chr8_3:34817033-34817052 None:intergenic 35.0%
TGCATGCAATGCTTAGATTA+AGG + chr8_3:34817078-34817097 None:intergenic 35.0%
AATCATTGATGTCATAGGCA+TGG - chr8_3:34817129-34817148 Msa1286600:intron 35.0%
ATCATTGATGTCATAGGCAT+GGG - chr8_3:34817130-34817149 Msa1286600:intron 35.0%
CATTGATATAACACTGGACA+TGG + chr8_3:34817288-34817307 None:intergenic 35.0%
CATGTCTCCAGAATATGCTA+TGG - chr8_3:34816906-34816925 Msa1286600:CDS 40.0%
TCTCCAGAATATGCTATGGA+AGG - chr8_3:34816910-34816929 Msa1286600:CDS 40.0%
ACACCTTCCATAGCATATTC+TGG + chr8_3:34816916-34816935 None:intergenic 40.0%
GACAGACCACTTAATCTAGT+AGG - chr8_3:34817024-34817043 Msa1286600:CDS 40.0%
AATCTAGTAGGACATGTGAG+TGG - chr8_3:34817036-34817055 Msa1286600:CDS 40.0%
GGAGCTATGAAAAGAAGGTA+TGG - chr8_3:34817151-34817170 Msa1286600:intron 40.0%
! AGAAGGTATGGTTCTTCAGT+TGG - chr8_3:34817163-34817182 Msa1286600:intron 40.0%
GAAAACGACTCATTTAGCGA+CGG + chr8_3:34817194-34817213 None:intergenic 40.0%
!! GCTAAATGAGTCGTTTTCTG+AGG - chr8_3:34817196-34817215 Msa1286600:intron 40.0%
GTGCTAAGATGTGTTCATGT+TGG - chr8_3:34817224-34817243 Msa1286600:CDS 40.0%
ATATAACACTGGACATGGTG+GGG + chr8_3:34817283-34817302 None:intergenic 40.0%
GATATAACACTGGACATGGT+GGG + chr8_3:34817284-34817303 None:intergenic 40.0%
TGATATAACACTGGACATGG+TGG + chr8_3:34817285-34817304 None:intergenic 40.0%
GCATGGGAGCTATGAAAAGA+AGG - chr8_3:34817146-34817165 Msa1286600:intron 45.0%
AGGTATGGTTCTTCAGTTGG+TGG - chr8_3:34817166-34817185 Msa1286600:intron 45.0%
!! TGAGTCGTTTTCTGAGGATG+AGG - chr8_3:34817202-34817221 Msa1286600:CDS 45.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 34816900 34817352 34816900 ID=Msa1286600;Name=Msa1286600
chr8_3 mRNA 34816900 34817352 34816900 ID=Msa1286600-mRNA-1;Parent=Msa1286600;Name=Msa1286600-mRNA-1;_AED=0.25;_eAED=0.27;_QI=7|0|0|1|1|0.5|2|0|105
chr8_3 exon 34817202 34817352 34817202 ID=Msa1286600-mRNA-1:exon:10372;Parent=Msa1286600-mRNA-1
chr8_3 exon 34816900 34817070 34816900 ID=Msa1286600-mRNA-1:exon:10371;Parent=Msa1286600-mRNA-1
chr8_3 five_prime_UTR 34817346 34817352 34817346 ID=Msa1286600-mRNA-1:five_prime_utr;Parent=Msa1286600-mRNA-1
chr8_3 CDS 34817202 34817345 34817202 ID=Msa1286600-mRNA-1:cds;Parent=Msa1286600-mRNA-1
chr8_3 CDS 34816900 34817070 34816900 ID=Msa1286600-mRNA-1:cds;Parent=Msa1286600-mRNA-1
Gene Sequence

>Msa1286600

ATGTCTCCAGAATATGCTATGGAAGGTGTTTTTTCTACGAAGTTTTATGTATACAGCTTTGGAGTGTTGCTCCTTGAAAATAACAGTGGTGAAAAAAACAATAGCTTCTATAGTGAAGACAGACCACTTAATCTAGTAGGACATTTGGTGGATCCGTCGCTAAATGAGTCGTTTTCTGAGGATGAGGTGCTAAGATGTGTTCATGTTGGTTTACTATGCGTCAAAGAAAATGCAGATGATCGCCCCACCATGTCCAGTGTTATATCAATGTTAACAAACAAAGTTAAAGTGGATGTTTTACCTAAGAAACCAGCA
Protein sequence

>Msa1286600

MSPEYAMEGVFSTKFYVYSFGVLLLENNSGEKNNSFYSEDRPLNLVGHLVDPSLNESFSEDEVLRCVHVGLLCVKENADDRPTMSSVISMLTNKVKVDVLPKKPA