Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1288370 | KEH19730.1 | 87.963 | 108 | 13 | 0 | 25 | 132 | 51 | 158 | 1.71e-59 | 196 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1288370 | A0A072U1Q9 | 87.963 | 108 | 13 | 0 | 25 | 132 | 51 | 158 | 8.18e-60 | 196 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1288370 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1288370 | MtrunA17_Chr2g0287651 | 80.952 | 84 | 16 | 0 | 22 | 105 | 45 | 128 | 1.95e-37 | 140 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 46 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCGCCTTCTTGCTTCTTC+TGG | 0.181522 | 8_3:-41162822 | None:intergenic |
| GAAATTCTTAAGCTTGAATT+TGG | 0.195409 | 8_3:+41158498 | Msa1288370:CDS |
| AGAGCAAGAAGCACTTATTT+AGG | 0.224589 | 8_3:+41158657 | Msa1288370:CDS |
| GCTTCATCCGAAGATGAATT+TGG | 0.234732 | 8_3:-41162758 | None:intergenic |
| TATAAATTTAATTATTGTTA+TGG | 0.247905 | 8_3:+41158537 | Msa1288370:CDS |
| CCATTAGGAAAGGTGATGTT+AGG | 0.336325 | 8_3:+41158577 | Msa1288370:CDS |
| GCCTTGCTTCACAATTTGTT+CGG | 0.351298 | 8_3:-41158712 | None:intergenic |
| CCTTGCTTCACAATTTGTTC+GGG | 0.354445 | 8_3:-41158711 | None:intergenic |
| CCTAACATCACCTTTCCTAA+TGG | 0.370059 | 8_3:-41158577 | None:intergenic |
| CATCCATGCTTTGTTCGTCC+TGG | 0.397977 | 8_3:+41162953 | Msa1288370:CDS |
| AGCACTTATTTAGGAATGAT+AGG | 0.417202 | 8_3:+41158666 | Msa1288370:CDS |
| TTCCAGTCCAAATTCATCTT+CGG | 0.449448 | 8_3:+41162751 | Msa1288370:CDS |
| TCGAACATCATCATCTTCTT+CGG | 0.464573 | 8_3:-41162860 | None:intergenic |
| CAGTTTGTGTGCAACAAGCA+TGG | 0.489064 | 8_3:+41158630 | Msa1288370:CDS |
| ATCCGAAGATGAATTTGGAC+TGG | 0.496626 | 8_3:-41162753 | None:intergenic |
| TCCGGCGAACTCACCGGCCA+TGG | 0.502591 | 8_3:-41162566 | None:intergenic |
| AACGGCGAAGAGAGAGAAAG+AGG | 0.509207 | 8_3:-41162416 | None:intergenic |
| TATTGTTATGGAAAATGCAA+AGG | 0.520397 | 8_3:+41158549 | Msa1288370:CDS |
| TCAATCAGCGATGAATTAGT+AGG | 0.534481 | 8_3:+41158438 | Msa1288370:CDS |
| GAAGAAGCAAGAAGGCGAAT+CGG | 0.539459 | 8_3:+41162825 | Msa1288370:CDS |
| AGTTTGTGTGCAACAAGCAT+GGG | 0.540247 | 8_3:+41158631 | Msa1288370:CDS |
| TCTTGAAGCACGACGGAGGA+AGG | 0.547325 | 8_3:-41162499 | None:intergenic |
| CGAATCCAGAAGAAGCAAGA+AGG | 0.559425 | 8_3:+41162817 | Msa1288370:CDS |
| CTTCGTTTACCTCGTTGATG+CGG | 0.561634 | 8_3:-41162893 | None:intergenic |
| GCGATGAATTAGTAGGCGAC+AGG | 0.563100 | 8_3:+41158445 | Msa1288370:CDS |
| AAACTGAGAGATAATCCTCT+TGG | 0.564539 | 8_3:-41162783 | None:intergenic |
| CGTTTACCTCGTTGATGCGG+TGG | 0.565973 | 8_3:-41162890 | None:intergenic |
| TAACCAGGACGAACAAAGCA+TGG | 0.572929 | 8_3:-41162956 | None:intergenic |
| CAAACAACATTCTTCTAACC+AGG | 0.573021 | 8_3:-41162971 | None:intergenic |
| CCCGAACAAATTGTGAAGCA+AGG | 0.587022 | 8_3:+41158711 | Msa1288370:CDS |
| AAGCTTAAGAATTTCATCAG+AGG | 0.588603 | 8_3:-41158490 | None:intergenic |
| GGACGAACAAAGCATGGATG+AGG | 0.600025 | 8_3:-41162950 | None:intergenic |
| GATGTTAGGAGCAATAGTAG+TGG | 0.605946 | 8_3:+41158591 | Msa1288370:CDS |
| TGATGATTCAGTTCAACAAG+AGG | 0.607522 | 8_3:+41158413 | Msa1288370:CDS |
| TGAATTAGTAGGCGACAGGT+TGG | 0.609282 | 8_3:+41158449 | Msa1288370:CDS |
| CATAGAGTATCGACGTCAAG+AGG | 0.613357 | 8_3:-41162475 | None:intergenic |
| GATGATTCAGTTCAACAAGA+GGG | 0.616185 | 8_3:+41158414 | Msa1288370:CDS |
| GTAGTGGAATAATTATGATG+AGG | 0.644524 | 8_3:+41158607 | Msa1288370:CDS |
| ATTATCTCTCAGTTTCAGCA+CGG | 0.659942 | 8_3:+41162791 | Msa1288370:CDS |
| AGATTCTTGAAGCACGACGG+AGG | 0.671003 | 8_3:-41162503 | None:intergenic |
| GCATGGATGAGGATGATGCA+AGG | 0.671914 | 8_3:-41162939 | None:intergenic |
| CTTCGGATGAAGCTGCCAAG+AGG | 0.682453 | 8_3:+41162768 | Msa1288370:CDS |
| CTAAGATTCTTGAAGCACGA+CGG | 0.687299 | 8_3:-41162506 | None:intergenic |
| CGACGTCAAGAGGAATGACG+CGG | 0.708648 | 8_3:-41162465 | None:intergenic |
| CAGCAACCACCGCATCAACG+AGG | 0.739333 | 8_3:+41162884 | Msa1288370:CDS |
| CGTCAAGAGGAATGACGCGG+CGG | 0.787647 | 8_3:-41162462 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAGTTTTAATTTTCATTT+CGG | + | chr8_3:41159478-41159497 | Msa1288370:intron | 10.0% |
| !! | AATTTGATTAAGAAAATAAA+GGG | - | chr8_3:41160787-41160806 | None:intergenic | 10.0% |
| !! | AAATTTGATTAAGAAAATAA+AGG | - | chr8_3:41160788-41160807 | None:intergenic | 10.0% |
| !!! | TTTTAAAATGGATTTTTAAT+AGG | - | chr8_3:41161704-41161723 | None:intergenic | 10.0% |
| !!! | CAATTTTTAGAATTTAAACA+GGG | - | chr8_3:41159257-41159276 | None:intergenic | 15.0% |
| !!! | ACAATTTTTAGAATTTAAAC+AGG | - | chr8_3:41159258-41159277 | None:intergenic | 15.0% |
| !!! | TTTTAAAATGGATTTTTAAC+AGG | - | chr8_3:41159314-41159333 | None:intergenic | 15.0% |
| !! | AAAATTAGAATGTAATACTT+AGG | + | chr8_3:41160461-41160480 | Msa1288370:intron | 15.0% |
| !!! | TTGATTTTAAGTTTGAAAAT+GGG | - | chr8_3:41160917-41160936 | None:intergenic | 15.0% |
| !!! | AAAAATGTTTTTGTTTTTGT+TGG | - | chr8_3:41160940-41160959 | None:intergenic | 15.0% |
| !!! | AACAAAAACAAAAACATTTT+TGG | + | chr8_3:41160939-41160958 | Msa1288370:intron | 15.0% |
| !!! | TTTTATTTTAGTTGAATTGA+AGG | - | chr8_3:41161023-41161042 | None:intergenic | 15.0% |
| !!! | TATTTTTAGGTCCAAAATTA+GGG | - | chr8_3:41158781-41158800 | None:intergenic | 20.0% |
| !!! | AGAATTGAGTTAGTATTTTT+AGG | - | chr8_3:41158794-41158813 | None:intergenic | 20.0% |
| !!! | ATTGTTTGAGTCTTTTAAAT+TGG | + | chr8_3:41158956-41158975 | Msa1288370:intron | 20.0% |
| !!! | ACTGAAAGAAATTTTAACAT+AGG | - | chr8_3:41159085-41159104 | None:intergenic | 20.0% |
| !!! | TCAAATGCAATTTTTGAAAT+GGG | - | chr8_3:41159177-41159196 | None:intergenic | 20.0% |
| !!! | TTCAAATGCAATTTTTGAAA+TGG | - | chr8_3:41159178-41159197 | None:intergenic | 20.0% |
| !!! | ACTCAGATGAAATTTTAAAA+TGG | - | chr8_3:41159326-41159345 | None:intergenic | 20.0% |
| !!! | ATGTAAATAACAAAAGTACA+AGG | - | chr8_3:41159505-41159524 | None:intergenic | 20.0% |
| !!! | AATGATTTTTGGAACTTTTT+GGG | - | chr8_3:41159713-41159732 | None:intergenic | 20.0% |
| !!! | AAATGATTTTTGGAACTTTT+TGG | - | chr8_3:41159714-41159733 | None:intergenic | 20.0% |
| !! | TGAAATTTGTCTTAAATGAT+TGG | + | chr8_3:41160134-41160153 | Msa1288370:intron | 20.0% |
| !! | AAAACTGAATTGAAATTCTT+TGG | + | chr8_3:41160186-41160205 | Msa1288370:intron | 20.0% |
| !! | AAACTGAATTGAAATTCTTT+GGG | + | chr8_3:41160187-41160206 | Msa1288370:intron | 20.0% |
| !!! | TCTTTTTCATAATAAACCTT+GGG | + | chr8_3:41160739-41160758 | Msa1288370:intron | 20.0% |
| !! | AATAAAGGGAAAATTACAAT+GGG | - | chr8_3:41160773-41160792 | None:intergenic | 20.0% |
| !! | AAATAAAGGGAAAATTACAA+TGG | - | chr8_3:41160774-41160793 | None:intergenic | 20.0% |
| !!! | GTTGATTTTAAGTTTGAAAA+TGG | - | chr8_3:41160918-41160937 | None:intergenic | 20.0% |
| !!! | AGAAATGAGTTAGTATTTTT+AGG | - | chr8_3:41161182-41161201 | None:intergenic | 20.0% |
| !! | ATTTGCAAAATTTACATGAA+AGG | + | chr8_3:41161267-41161286 | Msa1288370:intron | 20.0% |
| !! | TTTGCAAAATTTACATGAAA+GGG | + | chr8_3:41161268-41161287 | Msa1288370:intron | 20.0% |
| !!! | ATTGTTTGAGTCTTTTAAAT+TGG | + | chr8_3:41158956-41158975 | Msa1288370:intron | 20.0% |
| !!! | ATTGAAAGAAATTTTGACAT+AGG | - | chr8_3:41161465-41161484 | None:intergenic | 20.0% |
| !! | ACTTATTCAAACTATTTGAA+AGG | - | chr8_3:41161509-41161528 | None:intergenic | 20.0% |
| !!! | CTTCAAATGCAATTTTAAAA+TGG | - | chr8_3:41161557-41161576 | None:intergenic | 20.0% |
| !!! | ACTCAGATGTAATTTTAAAA+TGG | - | chr8_3:41161716-41161735 | None:intergenic | 20.0% |
| !!! | ACTCTAACAAACTTTAAAAA+AGG | - | chr8_3:41161922-41161941 | None:intergenic | 20.0% |
| ! | GAAATTCTTAAGCTTGAATT+TGG | + | chr8_3:41158498-41158517 | Msa1288370:CDS | 25.0% |
| ! | TATTGTTATGGAAAATGCAA+AGG | + | chr8_3:41158549-41158568 | Msa1288370:CDS | 25.0% |
| !! | TATGTGTTATACCCTAATTT+TGG | + | chr8_3:41158767-41158786 | Msa1288370:intron | 25.0% |
| !!! | GTATTTTTAGGTCCAAAATT+AGG | - | chr8_3:41158782-41158801 | None:intergenic | 25.0% |
| !! | AAAGACTCAAACAATTTTCA+AGG | - | chr8_3:41158951-41158970 | None:intergenic | 25.0% |
| !!! | ACTCAACTGATATTTTTGAA+AGG | - | chr8_3:41159019-41159038 | None:intergenic | 25.0% |
| ! | GACTCTAACAAACTTAAAAA+GGG | - | chr8_3:41159534-41159553 | None:intergenic | 25.0% |
| !! | ACAAATCACAACAACATTTT+CGG | + | chr8_3:41159946-41159965 | Msa1288370:intron | 25.0% |
| !!! | ATTCAGAGACAAATTTTTTG+TGG | - | chr8_3:41160114-41160133 | None:intergenic | 25.0% |
| ! | TATAATCCTCATGTTTCAAA+GGG | - | chr8_3:41160215-41160234 | None:intergenic | 25.0% |
| ! | AAGCAAAAACAAAGTGAAAT+AGG | - | chr8_3:41160278-41160297 | None:intergenic | 25.0% |
| ! | TTAAAGTGCAAGAAATAAGA+TGG | - | chr8_3:41160425-41160444 | None:intergenic | 25.0% |
| ! | GTATGTTTAGATGAATGTTT+AGG | + | chr8_3:41160661-41160680 | Msa1288370:intron | 25.0% |
| !!! | TGATGTTGTTCACATTTTTT+TGG | - | chr8_3:41160712-41160731 | None:intergenic | 25.0% |
| !!! | CTCTTTTTCATAATAAACCT+TGG | + | chr8_3:41160738-41160757 | Msa1288370:intron | 25.0% |
| ! | AATTAGTCATTTGCAAAATG+TGG | - | chr8_3:41160835-41160854 | None:intergenic | 25.0% |
| !! | GAATGTTCTAAATGAAGAAT+TGG | - | chr8_3:41161069-41161088 | None:intergenic | 25.0% |
| !! | TCTTCATTTAGAACATTCTT+AGG | + | chr8_3:41161071-41161090 | Msa1288370:intron | 25.0% |
| !! | GTTCTGTTATACACTAATTT+TGG | + | chr8_3:41161155-41161174 | Msa1288370:intron | 25.0% |
| !! | AAAGACTCAAACAATTTTCA+AGG | - | chr8_3:41158951-41158970 | None:intergenic | 25.0% |
| ! | ATCACCTATAAATAAGTCAA+AGG | + | chr8_3:41162008-41162027 | Msa1288370:intron | 25.0% |
| AAGCTTAAGAATTTCATCAG+AGG | - | chr8_3:41158493-41158512 | None:intergenic | 30.0% | |
| ! | AATGCAAAGGTTTTTCCATT+AGG | + | chr8_3:41158562-41158581 | Msa1288370:CDS | 30.0% |
| ! | AAAGGTTTTTCCATTAGGAA+AGG | + | chr8_3:41158567-41158586 | Msa1288370:CDS | 30.0% |
| ! | GTAGTGGAATAATTATGATG+AGG | + | chr8_3:41158607-41158626 | Msa1288370:CDS | 30.0% |
| AGCACTTATTTAGGAATGAT+AGG | + | chr8_3:41158666-41158685 | Msa1288370:CDS | 30.0% | |
| TTTCGCAAAATTCACATAGA+AGG | + | chr8_3:41158888-41158907 | Msa1288370:intron | 30.0% | |
| TTCGCAAAATTCACATAGAA+GGG | + | chr8_3:41158889-41158908 | Msa1288370:intron | 30.0% | |
| ! | GATAAAAATGAGTTGAATGC+AGG | - | chr8_3:41158929-41158948 | None:intergenic | 30.0% |
| TTTGACATGAGATTGAAACA+AGG | - | chr8_3:41158993-41159012 | None:intergenic | 30.0% | |
| GGACTCTAACAAACTTAAAA+AGG | - | chr8_3:41159535-41159554 | None:intergenic | 30.0% | |
| TTACCATGTCACCTATATAA+TGG | + | chr8_3:41159639-41159658 | Msa1288370:intron | 30.0% | |
| TACCATGTCACCTATATAAT+GGG | + | chr8_3:41159640-41159659 | Msa1288370:intron | 30.0% | |
| TTGTGGTTATGTGATGAATT+TGG | - | chr8_3:41159913-41159932 | None:intergenic | 30.0% | |
| TTTGTGGATCGTATTAAACA+GGG | - | chr8_3:41160098-41160117 | None:intergenic | 30.0% | |
| ! | TTTTGTGGATCGTATTAAAC+AGG | - | chr8_3:41160099-41160118 | None:intergenic | 30.0% |
| ! | GTTTTCACAAAGAGGATTAA+AGG | - | chr8_3:41160171-41160190 | None:intergenic | 30.0% |
| ! | TCAATTCAGTTTTCACAAAG+AGG | - | chr8_3:41160179-41160198 | None:intergenic | 30.0% |
| CTATAATCCTCATGTTTCAA+AGG | - | chr8_3:41160216-41160235 | None:intergenic | 30.0% | |
| !! | CTTTGAAACATGAGGATTAT+AGG | + | chr8_3:41160214-41160233 | Msa1288370:intron | 30.0% |
| AAAAATTCATCACCAATGCA+AGG | - | chr8_3:41160251-41160270 | None:intergenic | 30.0% | |
| !!! | GCATTGGTGATGAATTTTTT+AGG | + | chr8_3:41160252-41160271 | Msa1288370:intron | 30.0% |
| AATGAAACATGAAACGAAAG+TGG | - | chr8_3:41160369-41160388 | None:intergenic | 30.0% | |
| AAGACCATAGAATGTATCTA+GGG | + | chr8_3:41160521-41160540 | Msa1288370:intron | 30.0% | |
| ! | TTCTAGCTATATACCTAAAG+TGG | - | chr8_3:41160612-41160631 | None:intergenic | 30.0% |
| GCATGTTTAGATGTATGTTT+AGG | + | chr8_3:41160635-41160654 | Msa1288370:intron | 30.0% | |
| CATGAGATTATGAAATTGTG+AGG | - | chr8_3:41160861-41160880 | None:intergenic | 30.0% | |
| !! | TTTTGAAGAATAAGAGAGAG+AGG | - | chr8_3:41160893-41160912 | None:intergenic | 30.0% |
| !! | ACATTTTTGGAAGAGAACTA+CGG | + | chr8_3:41160952-41160971 | Msa1288370:intron | 30.0% |
| ! | GTTCTAAATGAAGAATTGGA+GGG | - | chr8_3:41161065-41161084 | None:intergenic | 30.0% |
| ! | TGTTCTAAATGAAGAATTGG+AGG | - | chr8_3:41161066-41161085 | None:intergenic | 30.0% |
| ! | GATTAAAATGAGTTGAATGC+AGG | - | chr8_3:41161308-41161327 | None:intergenic | 30.0% |
| TTTGACATGAGATTGAAACA+GGG | - | chr8_3:41158993-41159012 | None:intergenic | 30.0% | |
| ! | TTTTGACATGAGATTGAAAC+AGG | - | chr8_3:41158994-41159013 | None:intergenic | 30.0% |
| ! | ATGCAAATAACAAAAGTACG+AGG | - | chr8_3:41161893-41161912 | None:intergenic | 30.0% |
| GACTTATTTATAGGTGATGT+GGG | - | chr8_3:41162006-41162025 | None:intergenic | 30.0% | |
| TGACTTATTTATAGGTGATG+TGG | - | chr8_3:41162007-41162026 | None:intergenic | 30.0% | |
| ! | CATGCCTTTGACTTATTTAT+AGG | - | chr8_3:41162015-41162034 | None:intergenic | 30.0% |
| CTATAAATAAGTCAAAGGCA+TGG | + | chr8_3:41162013-41162032 | Msa1288370:intron | 30.0% | |
| !! | TTGATAATGAAGTTTGATGG+TGG | - | chr8_3:41162245-41162264 | None:intergenic | 30.0% |
| !! | AGGTTGATAATGAAGTTTGA+TGG | - | chr8_3:41162248-41162267 | None:intergenic | 30.0% |
| !!! | TTATGGAGTTTTTTTTGTGG+TGG | - | chr8_3:41162277-41162296 | None:intergenic | 30.0% |
| !!! | TGGTTATGGAGTTTTTTTTG+TGG | - | chr8_3:41162280-41162299 | None:intergenic | 30.0% |
| !! | ATGATTCAAGCTTTTGGTTA+TGG | - | chr8_3:41162314-41162333 | None:intergenic | 30.0% |
| ! | TTTTGGATGATTCAAGCTTT+TGG | - | chr8_3:41162320-41162339 | None:intergenic | 30.0% |
| !!! | AGTGAGTTAGCTTTGATTTT+TGG | - | chr8_3:41162337-41162356 | None:intergenic | 30.0% |
| TTTCAAATTCAGAAGATTCG+TGG | + | chr8_3:41162685-41162704 | Msa1288370:intron | 30.0% | |
| TGATGATTCAGTTCAACAAG+AGG | + | chr8_3:41158413-41158432 | Msa1288370:CDS | 35.0% | |
| GATGATTCAGTTCAACAAGA+GGG | + | chr8_3:41158414-41158433 | Msa1288370:CDS | 35.0% | |
| TCAATCAGCGATGAATTAGT+AGG | + | chr8_3:41158438-41158457 | Msa1288370:CDS | 35.0% | |
| !! | AGAGCAAGAAGCACTTATTT+AGG | + | chr8_3:41158657-41158676 | Msa1288370:CDS | 35.0% |
| TGTGCATTACAAAGCCAAAA+AGG | + | chr8_3:41158739-41158758 | Msa1288370:intron | 35.0% | |
| GTGCATTACAAAGCCAAAAA+GGG | + | chr8_3:41158740-41158759 | Msa1288370:intron | 35.0% | |
| TGCATTACAAAGCCAAAAAG+GGG | + | chr8_3:41158741-41158760 | Msa1288370:intron | 35.0% | |
| ! | TAACACATATCTCCCCTTTT+TGG | - | chr8_3:41158756-41158775 | None:intergenic | 35.0% |
| AAATGACTAAAATGCCCCTA+GGG | - | chr8_3:41159062-41159081 | None:intergenic | 35.0% | |
| TCTTAAGGACCAATAGCATT+TGG | - | chr8_3:41159571-41159590 | None:intergenic | 35.0% | |
| GGACTTGTAACAAACTCTTA+AGG | - | chr8_3:41159586-41159605 | None:intergenic | 35.0% | |
| !! | TCACCTATATAATGGGTCAA+AGG | + | chr8_3:41159647-41159666 | Msa1288370:intron | 35.0% |
| !! | CACCTATATAATGGGTCAAA+GGG | + | chr8_3:41159648-41159667 | Msa1288370:intron | 35.0% |
| AGTTAGGGATGAGAGAAAAA+TGG | - | chr8_3:41159753-41159772 | None:intergenic | 35.0% | |
| ! | TTATGTGATGAATTTGGTGG+TGG | - | chr8_3:41159907-41159926 | None:intergenic | 35.0% |
| TGGTTATGTGATGAATTTGG+TGG | - | chr8_3:41159910-41159929 | None:intergenic | 35.0% | |
| TTGAAACGGAAATGTGATGA+TGG | - | chr8_3:41159979-41159998 | None:intergenic | 35.0% | |
| ! | TACGATCCAGAATTTCAAGT+TGG | + | chr8_3:41160053-41160072 | Msa1288370:intron | 35.0% |
| !! | ACGATCCAGAATTTCAAGTT+GGG | + | chr8_3:41160054-41160073 | Msa1288370:intron | 35.0% |
| CAAGACCATAGAATGTATCT+AGG | + | chr8_3:41160520-41160539 | Msa1288370:intron | 35.0% | |
| CATACCCTAGATACATTCTA+TGG | - | chr8_3:41160528-41160547 | None:intergenic | 35.0% | |
| AGGGTATGATGTAAAGACAA+TGG | + | chr8_3:41160540-41160559 | Msa1288370:intron | 35.0% | |
| !! | TTTTAGTCAGTTTAGCTCCT+AGG | + | chr8_3:41161423-41161442 | Msa1288370:intron | 35.0% |
| ! | TTTAGTCAGTTTAGCTCCTA+GGG | + | chr8_3:41161424-41161443 | Msa1288370:intron | 35.0% |
| AAAAGACTAAAATGCCCCTA+GGG | - | chr8_3:41161600-41161619 | None:intergenic | 35.0% | |
| ! | GTTTGTTAGAGTCAAAGTCA+AGG | + | chr8_3:41161930-41161949 | Msa1288370:intron | 35.0% |
| AGGAAAGTTGTTAGAAGAGA+GGG | - | chr8_3:41162127-41162146 | None:intergenic | 35.0% | |
| GAGGATGAGAAAGTTAGTTA+GGG | - | chr8_3:41162166-41162185 | None:intergenic | 35.0% | |
| AGAGGATGAGAAAGTTAGTT+AGG | - | chr8_3:41162167-41162186 | None:intergenic | 35.0% | |
| TTCAAGGTTGTTAGAGATGA+AGG | - | chr8_3:41162222-41162241 | None:intergenic | 35.0% | |
| !!! | AGTTTTTTTTGTGGTGGTGA+TGG | - | chr8_3:41162271-41162290 | None:intergenic | 35.0% |
| !! | TTTTGGTTATGGAGGTTTTG+TGG | - | chr8_3:41162303-41162322 | None:intergenic | 35.0% |
| !! | ATTCAAGCTTTTGGTTATGG+AGG | - | chr8_3:41162311-41162330 | None:intergenic | 35.0% |
| ! | TGTTTTCGGCATAGTTTGAA+CGG | - | chr8_3:41162437-41162456 | None:intergenic | 35.0% |
| TCACTTGTTCGAAGAAGATT+AGG | + | chr8_3:41162616-41162635 | Msa1288370:intron | 35.0% | |
| CACTTGTTCGAAGAAGATTA+GGG | + | chr8_3:41162617-41162636 | Msa1288370:intron | 35.0% | |
| TTCCAGTCCAAATTCATCTT+CGG | + | chr8_3:41162751-41162770 | Msa1288370:CDS | 35.0% | |
| AAACTGAGAGATAATCCTCT+TGG | - | chr8_3:41162786-41162805 | None:intergenic | 35.0% | |
| ATTATCTCTCAGTTTCAGCA+CGG | + | chr8_3:41162791-41162810 | Msa1288370:CDS | 35.0% | |
| TCGAACATCATCATCTTCTT+CGG | - | chr8_3:41162863-41162882 | None:intergenic | 35.0% | |
| CCTAACATCACCTTTCCTAA+TGG | - | chr8_3:41158580-41158599 | None:intergenic | 40.0% | |
| CCATTAGGAAAGGTGATGTT+AGG | + | chr8_3:41158577-41158596 | Msa1288370:CDS | 40.0% | |
| GATGTTAGGAGCAATAGTAG+TGG | + | chr8_3:41158591-41158610 | Msa1288370:CDS | 40.0% | |
| AGTTTGTGTGCAACAAGCAT+GGG | + | chr8_3:41158631-41158650 | Msa1288370:CDS | 40.0% | |
| ! | CCTTGCTTCACAATTTGTTC+GGG | - | chr8_3:41158714-41158733 | None:intergenic | 40.0% |
| ! | GCCTTGCTTCACAATTTGTT+CGG | - | chr8_3:41158715-41158734 | None:intergenic | 40.0% |
| TTTAGTCAGTTTAGCCCCTA+GGG | + | chr8_3:41159044-41159063 | Msa1288370:intron | 40.0% | |
| AATGACTAAAATGCCCCTAG+GGG | - | chr8_3:41159061-41159080 | None:intergenic | 40.0% | |
| GAAATGACTAAAATGCCCCT+AGG | - | chr8_3:41159063-41159082 | None:intergenic | 40.0% | |
| AAAAGACCAAAATGCCCCTA+GGG | - | chr8_3:41159222-41159241 | None:intergenic | 40.0% | |
| !! | TTTAGTCGTTTTAAGCCCCT+AGG | + | chr8_3:41159349-41159368 | Msa1288370:intron | 40.0% |
| !! | TTAGTCGTTTTAAGCCCCTA+GGG | + | chr8_3:41159350-41159369 | Msa1288370:intron | 40.0% |
| AAATGACCAAAATGCCCCTA+GGG | - | chr8_3:41159368-41159387 | None:intergenic | 40.0% | |
| ACCAATAGCATTTGGACACA+TGG | - | chr8_3:41159563-41159582 | None:intergenic | 40.0% | |
| GTTACAAGTCCAAGTACACA+TGG | + | chr8_3:41159595-41159614 | Msa1288370:intron | 40.0% | |
| TACACATGGCATTGTCTCAT+TGG | + | chr8_3:41159609-41159628 | Msa1288370:intron | 40.0% | |
| TATAGGTGACATGGTAAGCT+TGG | - | chr8_3:41159636-41159655 | None:intergenic | 40.0% | |
| GACCCATTATATAGGTGACA+TGG | - | chr8_3:41159645-41159664 | None:intergenic | 40.0% | |
| GACCCTTTGACCCATTATAT+AGG | - | chr8_3:41159653-41159672 | None:intergenic | 40.0% | |
| !! | GTGGTGGTTCAAGTTTGTTA+GGG | - | chr8_3:41159789-41159808 | None:intergenic | 40.0% |
| ! | AGTGGTGGTTCAAGTTTGTT+AGG | - | chr8_3:41159790-41159809 | None:intergenic | 40.0% |
| GTTGAAGATGAAGAAAGTGG+TGG | - | chr8_3:41159805-41159824 | None:intergenic | 40.0% | |
| GAGGTTGAAGATGAAGAAAG+TGG | - | chr8_3:41159808-41159827 | None:intergenic | 40.0% | |
| ! | GATTGTTAGGTGGTGGTTTA+TGG | - | chr8_3:41159859-41159878 | None:intergenic | 40.0% |
| ! | TTGTGCTGTGATGGTTTTTG+TGG | - | chr8_3:41159930-41159949 | None:intergenic | 40.0% |
| ! | TGTTGTGATTTGTGCTGTGA+TGG | - | chr8_3:41159939-41159958 | None:intergenic | 40.0% |
| !! | TAGCGGATTCGGATTTGAAA+CGG | - | chr8_3:41159993-41160012 | None:intergenic | 40.0% |
| ATCATTCGCAGGGATCAAAT+CGG | + | chr8_3:41160012-41160031 | Msa1288370:intron | 40.0% | |
| !! | ATCCAGAATTTCAAGTTGGG+AGG | + | chr8_3:41160057-41160076 | Msa1288370:intron | 40.0% |
| GTCATATTCAAGCCTTGCAT+TGG | + | chr8_3:41160236-41160255 | Msa1288370:intron | 40.0% | |
| ATGGAGAAGAAGATGAAGTG+TGG | - | chr8_3:41160406-41160425 | None:intergenic | 40.0% | |
| !! | ACAATGGGATTTTGATCCCA+AGG | - | chr8_3:41160758-41160777 | None:intergenic | 40.0% |
| TTCATAATCTCATGCCCTTG+AGG | + | chr8_3:41160867-41160886 | Msa1288370:intron | 40.0% | |
| !! | TTTTTGGAAGAGAACTACGG+TGG | + | chr8_3:41160955-41160974 | Msa1288370:intron | 40.0% |
| ! | GGTGGATTTGATCCCTTAAA+CGG | + | chr8_3:41160973-41160992 | Msa1288370:intron | 40.0% |
| GTGGATTTGATCCCTTAAAC+GGG | + | chr8_3:41160974-41160993 | Msa1288370:intron | 40.0% | |
| AATGAAGAATTGGAGGGAGA+AGG | - | chr8_3:41161059-41161078 | None:intergenic | 40.0% | |
| ! | TTAGTCAGTTTAGCTCCTAG+GGG | + | chr8_3:41161425-41161444 | Msa1288370:intron | 40.0% |
| GAAATGACTAAAATGCCCCT+AGG | - | chr8_3:41159063-41159082 | None:intergenic | 40.0% | |
| AAAGACTAAAATGCCCCTAG+GGG | - | chr8_3:41161599-41161618 | None:intergenic | 40.0% | |
| GAAAAGACTAAAATGCCCCT+AGG | - | chr8_3:41161601-41161620 | None:intergenic | 40.0% | |
| !! | TTTTTAGTCGTTTTAGCCCC+AGG | + | chr8_3:41161738-41161757 | Msa1288370:intron | 40.0% |
| !! | TTTTAGTCGTTTTAGCCCCA+GGG | + | chr8_3:41161739-41161758 | Msa1288370:intron | 40.0% |
| ACCAATGGAACAATGACATG+TGG | - | chr8_3:41161974-41161993 | None:intergenic | 40.0% | |
| GAGGAAAGTTGTTAGAAGAG+AGG | - | chr8_3:41162128-41162147 | None:intergenic | 40.0% | |
| GATGAGAAAGTTAGTTAGGG+TGG | - | chr8_3:41162163-41162182 | None:intergenic | 40.0% | |
| !! | GAGGTGGTTAGAGTTTGTTA+GGG | - | chr8_3:41162197-41162216 | None:intergenic | 40.0% |
| AAGGTTGTTAGAGATGAAGG+TGG | - | chr8_3:41162219-41162238 | None:intergenic | 40.0% | |
| !! | TGAAGTTTGATGGTGGTTCA+AGG | - | chr8_3:41162238-41162257 | None:intergenic | 40.0% |
| !!! | TTTTTTTGTGGTGGTGATGG+AGG | - | chr8_3:41162268-41162287 | None:intergenic | 40.0% |
| CTAAGATTCTTGAAGCACGA+CGG | - | chr8_3:41162509-41162528 | None:intergenic | 40.0% | |
| TCTTCTTCGAACAAGTGAGT+GGG | - | chr8_3:41162614-41162633 | None:intergenic | 40.0% | |
| ATCTTCTTCGAACAAGTGAG+TGG | - | chr8_3:41162615-41162634 | None:intergenic | 40.0% | |
| GAAGATTAGGGAGCTGAATA+AGG | + | chr8_3:41162629-41162648 | Msa1288370:intron | 40.0% | |
| CAATCCTGCTTCAAACACTT+CGG | + | chr8_3:41162656-41162675 | Msa1288370:intron | 40.0% | |
| ! | ATAACCGAAGTGTTTGAAGC+AGG | - | chr8_3:41162663-41162682 | None:intergenic | 40.0% |
| TGCTTCAAACACTTCGGTTA+TGG | + | chr8_3:41162662-41162681 | Msa1288370:intron | 40.0% | |
| ATCCGAAGATGAATTTGGAC+TGG | - | chr8_3:41162756-41162775 | None:intergenic | 40.0% | |
| GCTTCATCCGAAGATGAATT+TGG | - | chr8_3:41162761-41162780 | None:intergenic | 40.0% | |
| TGAATTAGTAGGCGACAGGT+TGG | + | chr8_3:41158449-41158468 | Msa1288370:CDS | 45.0% | |
| CAGTTTGTGTGCAACAAGCA+TGG | + | chr8_3:41158630-41158649 | Msa1288370:CDS | 45.0% | |
| CCCGAACAAATTGTGAAGCA+AGG | + | chr8_3:41158711-41158730 | Msa1288370:CDS | 45.0% | |
| CTTTAGTCAGTTTAGCCCCT+AGG | + | chr8_3:41159043-41159062 | Msa1288370:intron | 45.0% | |
| TTAGTCAGTTTAGCCCCTAG+GGG | + | chr8_3:41159045-41159064 | Msa1288370:intron | 45.0% | |
| ! | TTTGAGTCAGTTTTGCCCCT+AGG | + | chr8_3:41159203-41159222 | Msa1288370:intron | 45.0% |
| ! | TTGAGTCAGTTTTGCCCCTA+GGG | + | chr8_3:41159204-41159223 | Msa1288370:intron | 45.0% |
| AAAGACCAAAATGCCCCTAG+GGG | - | chr8_3:41159221-41159240 | None:intergenic | 45.0% | |
| GAAAAGACCAAAATGCCCCT+AGG | - | chr8_3:41159223-41159242 | None:intergenic | 45.0% | |
| !! | TAGTCGTTTTAAGCCCCTAG+GGG | + | chr8_3:41159351-41159370 | Msa1288370:intron | 45.0% |
| AATGACCAAAATGCCCCTAG+GGG | - | chr8_3:41159367-41159386 | None:intergenic | 45.0% | |
| GAAATGACCAAAATGCCCCT+AGG | - | chr8_3:41159369-41159388 | None:intergenic | 45.0% | |
| GCCATGTGTCCAAATGCTAT+TGG | + | chr8_3:41159559-41159578 | Msa1288370:intron | 45.0% | |
| GAGACAATGCCATGTGTACT+TGG | - | chr8_3:41159607-41159626 | None:intergenic | 45.0% | |
| GGTGGTTGAGGAGTTAGTTA+GGG | - | chr8_3:41159768-41159787 | None:intergenic | 45.0% | |
| !! | CAAGTTTGTTAGGGTGGTTG+AGG | - | chr8_3:41159780-41159799 | None:intergenic | 45.0% |
| !! | GTGGTTCAAGTTTGTTAGGG+TGG | - | chr8_3:41159786-41159805 | None:intergenic | 45.0% |
| AGGTTTGTGGTGGTTGTTAG+AGG | - | chr8_3:41159827-41159846 | None:intergenic | 45.0% | |
| ATGGTGGTTATGGAGGTTTG+TGG | - | chr8_3:41159840-41159859 | None:intergenic | 45.0% | |
| GTGGTTTATGGTGGTTATGG+AGG | - | chr8_3:41159847-41159866 | None:intergenic | 45.0% | |
| GTGGTGGTTTATGGTGGTTA+TGG | - | chr8_3:41159850-41159869 | None:intergenic | 45.0% | |
| ! | TGTTAGGTGGTGGTTTATGG+TGG | - | chr8_3:41159856-41159875 | None:intergenic | 45.0% |
| TGTGGTGGTTGGAGATTGTT+AGG | - | chr8_3:41159872-41159891 | None:intergenic | 45.0% | |
| !! | ATGAATTTGGTGGTGGAAGG+TGG | - | chr8_3:41159900-41159919 | None:intergenic | 45.0% |
| !! | GTGATGAATTTGGTGGTGGA+AGG | - | chr8_3:41159903-41159922 | None:intergenic | 45.0% |
| TTGATCCCTGCGAATGATAG+CGG | - | chr8_3:41160010-41160029 | None:intergenic | 45.0% | |
| CTCCTCCCAACTTGAAATTC+TGG | - | chr8_3:41160062-41160081 | None:intergenic | 45.0% | |
| !! | TGGGAACCCTTTGAAACATG+AGG | + | chr8_3:41160206-41160225 | Msa1288370:intron | 45.0% |
| ACATGCACACACACCACTTT+AGG | + | chr8_3:41160596-41160615 | Msa1288370:intron | 45.0% | |
| ATAAGAGAGAGAGGCCTCAA+GGG | - | chr8_3:41160884-41160903 | None:intergenic | 45.0% | |
| AATAAGAGAGAGAGGCCTCA+AGG | - | chr8_3:41160885-41160904 | None:intergenic | 45.0% | |
| TTGCCTACGTACCCGTTTAA+GGG | - | chr8_3:41160988-41161007 | None:intergenic | 45.0% | |
| GCACGCGTAGAAGTTAAAGA+CGG | + | chr8_3:41161133-41161152 | Msa1288370:intron | 45.0% | |
| ! | TTTGAGTCAGTTTTGCCCCT+AGG | + | chr8_3:41159203-41159222 | Msa1288370:intron | 45.0% |
| ! | TTGAGTCAGTTTTGCCCCTA+GGG | + | chr8_3:41159204-41159223 | Msa1288370:intron | 45.0% |
| !! | TTTAGTCGTTTTAGCCCCAG+GGG | + | chr8_3:41161740-41161759 | Msa1288370:intron | 45.0% |
| GCCACATGTCATTGTTCCAT+TGG | + | chr8_3:41161970-41161989 | Msa1288370:intron | 45.0% | |
| ATAGGTGATGTGGGAATGCT+TGG | - | chr8_3:41161997-41162016 | None:intergenic | 45.0% | |
| TTAGTTAGGGTGGAGGAAAG+TGG | - | chr8_3:41162153-41162172 | None:intergenic | 45.0% | |
| GAGAAAGTTAGTTAGGGTGG+AGG | - | chr8_3:41162160-41162179 | None:intergenic | 45.0% | |
| ! | GTTTGTTAGGGTGGAGATAG+AGG | - | chr8_3:41162185-41162204 | None:intergenic | 45.0% |
| !! | GTGGTTAGAGTTTGTTAGGG+TGG | - | chr8_3:41162194-41162213 | None:intergenic | 45.0% |
| ! | GGAGGTGGTTAGAGTTTGTT+AGG | - | chr8_3:41162198-41162217 | None:intergenic | 45.0% |
| GTTGTTAGAGATGAAGGTGG+AGG | - | chr8_3:41162216-41162235 | None:intergenic | 45.0% | |
| !! | TGGAGGTTTTGTGGTGGTTA+TGG | - | chr8_3:41162294-41162313 | None:intergenic | 45.0% |
| !! | TGGTTATGGAGGTTTTGTGG+TGG | - | chr8_3:41162300-41162319 | None:intergenic | 45.0% |
| !! | CATAGAGTATCGACGTCAAG+AGG | - | chr8_3:41162478-41162497 | None:intergenic | 45.0% |
| !! | CATGGTTTTTGCTTGGTGGA+TGG | - | chr8_3:41162551-41162570 | None:intergenic | 45.0% |
| CATCCACCAAGCAAAAACCA+TGG | + | chr8_3:41162549-41162568 | Msa1288370:CDS | 45.0% | |
| CGAATCCAGAAGAAGCAAGA+AGG | + | chr8_3:41162817-41162836 | Msa1288370:CDS | 45.0% | |
| ATTCGCCTTCTTGCTTCTTC+TGG | - | chr8_3:41162825-41162844 | None:intergenic | 45.0% | |
| GAAGAAGCAAGAAGGCGAAT+CGG | + | chr8_3:41162825-41162844 | Msa1288370:CDS | 45.0% | |
| CTTCGTTTACCTCGTTGATG+CGG | - | chr8_3:41162896-41162915 | None:intergenic | 45.0% | |
| TAACCAGGACGAACAAAGCA+TGG | - | chr8_3:41162959-41162978 | None:intergenic | 45.0% | |
| !! | TATAAATTTAATTATTGTTA+TGG | + | chr8_3:41158537-41158556 | Msa1288370:CDS | 5.0% |
| !!! | AATAATTAAAAAATGATTTT+TGG | - | chr8_3:41159724-41159743 | None:intergenic | 5.0% |
| GCGATGAATTAGTAGGCGAC+AGG | + | chr8_3:41158445-41158464 | Msa1288370:CDS | 50.0% | |
| ! | TGAGTCAGTTTTGCCCCTAG+GGG | + | chr8_3:41159205-41159224 | Msa1288370:intron | 50.0% |
| !!! | TTTTGCCCCTAGGGGCATTT+TGG | + | chr8_3:41159213-41159232 | Msa1288370:intron | 50.0% |
| !!! | TTAAGCCCCTAGGGGCATTT+TGG | + | chr8_3:41159359-41159378 | Msa1288370:intron | 50.0% |
| GCATTTGGACACATGGCACT+TGG | - | chr8_3:41159556-41159575 | None:intergenic | 50.0% | |
| GGGTGGTTGAGGAGTTAGTT+AGG | - | chr8_3:41159769-41159788 | None:intergenic | 50.0% | |
| GTGGTTATGGAGGTTTGTGG+TGG | - | chr8_3:41159837-41159856 | None:intergenic | 50.0% | |
| GGTTGGAGATTGTTAGGTGG+TGG | - | chr8_3:41159866-41159885 | None:intergenic | 50.0% | |
| GGTGGTTGGAGATTGTTAGG+TGG | - | chr8_3:41159869-41159888 | None:intergenic | 50.0% | |
| AGGTGGAAGAATGTGGTGGT+TGG | - | chr8_3:41159883-41159902 | None:intergenic | 50.0% | |
| TGGAAGGTGGAAGAATGTGG+TGG | - | chr8_3:41159887-41159906 | None:intergenic | 50.0% | |
| TGGTGGAAGGTGGAAGAATG+TGG | - | chr8_3:41159890-41159909 | None:intergenic | 50.0% | |
| !! | CCTGCGAATGATAGCGGATT+CGG | - | chr8_3:41160004-41160023 | None:intergenic | 50.0% |
| CGAATCCGCTATCATTCGCA+GGG | + | chr8_3:41160002-41160021 | Msa1288370:intron | 50.0% | |
| AGTGGTGTGTGTGCATGTGT+CGG | - | chr8_3:41160594-41160613 | None:intergenic | 50.0% | |
| GATCCCTTAAACGGGTACGT+AGG | + | chr8_3:41160982-41161001 | Msa1288370:intron | 50.0% | |
| CTTGCCTACGTACCCGTTTA+AGG | - | chr8_3:41160989-41161008 | None:intergenic | 50.0% | |
| CTTAAACGGGTACGTAGGCA+AGG | + | chr8_3:41160987-41161006 | Msa1288370:intron | 50.0% | |
| ! | TGAGTCAGTTTTGCCCCTAG+GGG | + | chr8_3:41159205-41159224 | Msa1288370:intron | 50.0% |
| AAATGACCAAAACGCCCCTG+GGG | - | chr8_3:41161757-41161776 | None:intergenic | 50.0% | |
| GAAATGACCAAAACGCCCCT+GGG | - | chr8_3:41161758-41161777 | None:intergenic | 50.0% | |
| TGAAATGACCAAAACGCCCC+TGG | - | chr8_3:41161759-41161778 | None:intergenic | 50.0% | |
| TGTGGGAATGCTTGGACCAA+TGG | - | chr8_3:41161989-41162008 | None:intergenic | 50.0% | |
| GTTAGAGATGAAGGTGGAGG+TGG | - | chr8_3:41162213-41162232 | None:intergenic | 50.0% | |
| AACGGCGAAGAGAGAGAAAG+AGG | - | chr8_3:41162419-41162438 | None:intergenic | 50.0% | |
| AGATTCTTGAAGCACGACGG+AGG | - | chr8_3:41162506-41162525 | None:intergenic | 50.0% | |
| !! | GGTTTTTGCTTGGTGGATGG+TGG | - | chr8_3:41162548-41162567 | None:intergenic | 50.0% |
| CACCAAGCAAAAACCATGGC+CGG | + | chr8_3:41162553-41162572 | Msa1288370:CDS | 50.0% | |
| AGTGAGTGGGAAGAGAGATC+CGG | - | chr8_3:41162601-41162620 | None:intergenic | 50.0% | |
| GCATGGATGAGGATGATGCA+AGG | - | chr8_3:41162942-41162961 | None:intergenic | 50.0% | |
| GGACGAACAAAGCATGGATG+AGG | - | chr8_3:41162953-41162972 | None:intergenic | 50.0% | |
| ! | CATCCATGCTTTGTTCGTCC+TGG | + | chr8_3:41162953-41162972 | Msa1288370:CDS | 50.0% |
| CCGAATCCGCTATCATTCGC+AGG | + | chr8_3:41160001-41160020 | Msa1288370:intron | 55.0% | |
| ! | GCATGTGTCGGTGCTTGTGT+CGG | - | chr8_3:41160582-41160601 | None:intergenic | 55.0% |
| !!! | TTTTAGCCCCAGGGGCGTTT+TGG | + | chr8_3:41161748-41161767 | Msa1288370:intron | 55.0% |
| GTTAGGGTGGAGGAAAGTGG+TGG | - | chr8_3:41162150-41162169 | None:intergenic | 55.0% | |
| CGACGTCAAGAGGAATGACG+CGG | - | chr8_3:41162468-41162487 | None:intergenic | 55.0% | |
| TCTTGAAGCACGACGGAGGA+AGG | - | chr8_3:41162502-41162521 | None:intergenic | 55.0% | |
| ! | CGGCCATGGTTTTTGCTTGG+TGG | - | chr8_3:41162555-41162574 | None:intergenic | 55.0% |
| ! | CACCGGCCATGGTTTTTGCT+TGG | - | chr8_3:41162558-41162577 | None:intergenic | 55.0% |
| CTTCGGATGAAGCTGCCAAG+AGG | + | chr8_3:41162768-41162787 | Msa1288370:CDS | 55.0% | |
| CGTTTACCTCGTTGATGCGG+TGG | - | chr8_3:41162893-41162912 | None:intergenic | 55.0% | |
| AGGGTGGAGGAAAGTGGTGG+AGG | - | chr8_3:41162147-41162166 | None:intergenic | 60.0% | |
| ! | ACGCGGCGGTCTCGTGTTTT+CGG | - | chr8_3:41162451-41162470 | None:intergenic | 60.0% |
| CGTCAAGAGGAATGACGCGG+CGG | - | chr8_3:41162465-41162484 | None:intergenic | 60.0% | |
| GTTGTCTCCGGCGAACTCAC+CGG | - | chr8_3:41162575-41162594 | None:intergenic | 60.0% | |
| GAGATCCGGCGTGTTGTCTC+CGG | - | chr8_3:41162587-41162606 | None:intergenic | 60.0% | |
| CAGCAACCACCGCATCAACG+AGG | + | chr8_3:41162884-41162903 | Msa1288370:CDS | 60.0% | |
| ACCATGGCCGGTGAGTTCGC+CGG | + | chr8_3:41162565-41162584 | Msa1288370:intron | 65.0% | |
| GTTCGCCGGAGACAACACGC+CGG | + | chr8_3:41162579-41162598 | Msa1288370:intron | 65.0% | |
| TCCGGCGAACTCACCGGCCA+TGG | - | chr8_3:41162569-41162588 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 41158345 | 41162979 | 41158345 | ID=Msa1288370;Name=Msa1288370 |
| chr8_3 | mRNA | 41158345 | 41162979 | 41158345 | ID=Msa1288370-mRNA-1;Parent=Msa1288370;Name=Msa1288370-mRNA-1;_AED=0.37;_eAED=0.39;_QI=0|0|0|0.33|1|1|3|0|270 |
| chr8_3 | exon | 41158345 | 41158737 | 41158345 | ID=Msa1288370-mRNA-1:exon:11299;Parent=Msa1288370-mRNA-1 |
| chr8_3 | exon | 41162407 | 41162574 | 41162407 | ID=Msa1288370-mRNA-1:exon:11300;Parent=Msa1288370-mRNA-1 |
| chr8_3 | exon | 41162728 | 41162979 | 41162728 | ID=Msa1288370-mRNA-1:exon:11301;Parent=Msa1288370-mRNA-1 |
| chr8_3 | CDS | 41158345 | 41158737 | 41158345 | ID=Msa1288370-mRNA-1:cds;Parent=Msa1288370-mRNA-1 |
| chr8_3 | CDS | 41162407 | 41162574 | 41162407 | ID=Msa1288370-mRNA-1:cds;Parent=Msa1288370-mRNA-1 |
| chr8_3 | CDS | 41162728 | 41162979 | 41162728 | ID=Msa1288370-mRNA-1:cds;Parent=Msa1288370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
