Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1288740 | XP_013445767.1 | 88.645 | 273 | 15 | 4 | 1 | 263 | 1 | 267 | 2.52e-136 | 395 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1288740 | sp|Q9M9S3|WHY1_ARATH | 60.360 | 222 | 77 | 2 | 48 | 263 | 47 | 263 | 6.79e-96 | 285 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1288740 | A0A072TSF9 | 88.645 | 273 | 15 | 4 | 1 | 263 | 1 | 267 | 1.20e-136 | 395 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1288740 | TF | Whirly |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1288740 | MtrunA17_Chr8g0362331 | 88.645 | 273 | 15 | 4 | 1 | 263 | 1 | 267 | 2.32e-140 | 395 |
| Msa1288740 | MtrunA17_Chr5g0416091 | 56.502 | 223 | 84 | 4 | 50 | 263 | 43 | 261 | 8.50e-80 | 241 |
| Msa1288740 | MtrunA17_Chr7g0274781 | 36.000 | 200 | 116 | 4 | 72 | 263 | 31 | 226 | 7.03e-44 | 148 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1288740 | AT1G14410.1 | 60.360 | 222 | 77 | 2 | 48 | 263 | 47 | 263 | 6.90e-97 | 285 |
| Msa1288740 | AT2G02740.1 | 59.729 | 221 | 76 | 4 | 50 | 263 | 54 | 268 | 4.33e-91 | 270 |
| Msa1288740 | AT1G71260.1 | 41.463 | 164 | 90 | 1 | 86 | 243 | 53 | 216 | 6.76e-45 | 151 |
Find 85 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCGGAATACTCCGGATTTA+TGG | 0.234925 | 8_3:-41916862 | None:intergenic |
| AGCAGCCTTCCCTTTGTAAA+TGG | 0.248567 | 8_3:-41913528 | None:intergenic |
| GGTGTAGTGGGAGGAGGAGG+GGG | 0.250693 | 8_3:-41913227 | None:intergenic |
| CAACTTTGAAATGTGCTAAA+TGG | 0.273497 | 8_3:+41916993 | Msa1288740:three_prime_UTR |
| GGGTGTAGTGGGAGGAGGAG+GGG | 0.309825 | 8_3:-41913228 | None:intergenic |
| TATATCATGCCATACCTTCT+AGG | 0.331839 | 8_3:+41916819 | Msa1288740:CDS |
| TCTAAAACAATTAATCTAAC+AGG | 0.332954 | 8_3:-41917026 | None:intergenic |
| CAGGGGCATACAAGATATCT+AGG | 0.351989 | 8_3:+41914324 | Msa1288740:CDS |
| ACCACCGGAATTCGCGCCTT+TGG | 0.357831 | 8_3:+41913568 | Msa1288740:CDS |
| GTGTAGTGGGAGGAGGAGGG+GGG | 0.362307 | 8_3:-41913226 | None:intergenic |
| TGTATCTAAAGCAGAGTTAT+CGG | 0.376960 | 8_3:+41916156 | Msa1288740:CDS |
| CAAAGGTATGCCAACCTAGA+AGG | 0.381461 | 8_3:-41916833 | None:intergenic |
| ACATCCAAAGGCGCGAATTC+CGG | 0.385464 | 8_3:-41913572 | None:intergenic |
| TAGTAATAATTAAAGAGAAT+TGG | 0.387933 | 8_3:+41917139 | Msa1288740:three_prime_UTR |
| GGGGTGTAGTGGGAGGAGGA+GGG | 0.394887 | 8_3:-41913229 | None:intergenic |
| GATAACTCTGCTTTAGATAC+AGG | 0.397032 | 8_3:-41916154 | None:intergenic |
| AACAATGCTAATCCAAGATA+TGG | 0.413675 | 8_3:+41916891 | Msa1288740:CDS |
| CTTCAGTTTGCGCCCTCTGT+TGG | 0.417534 | 8_3:+41914362 | Msa1288740:CDS |
| TTTGGAAGAGAAAGAGTTGT+TGG | 0.420521 | 8_3:-41913126 | None:intergenic |
| GAAGTACCTGAAGGATTGTT+GGG | 0.420760 | 8_3:-41913251 | None:intergenic |
| TCGTAGTCTCCACCATATCT+TGG | 0.423400 | 8_3:-41916903 | None:intergenic |
| TGTTGGTAGTGAAAAGTTTG+AGG | 0.441986 | 8_3:-41913109 | None:intergenic |
| CATGTTATCCGTGGATGAAA+TGG | 0.444135 | 8_3:+41914973 | Msa1288740:CDS |
| AAGTGTAAGTGAGACATTAT+CGG | 0.444840 | 8_3:-41913023 | None:intergenic |
| GGCGCGAATTCCGGTGGTCT+AGG | 0.461203 | 8_3:-41913563 | None:intergenic |
| AGTTGGAGCTTTGCCACCTA+GGG | 0.463185 | 8_3:+41913490 | Msa1288740:intron |
| AGAAGTACCTGAAGGATTGT+TGG | 0.466680 | 8_3:-41913252 | None:intergenic |
| TAGTTGGAGCTTTGCCACCT+AGG | 0.466878 | 8_3:+41913489 | Msa1288740:intron |
| CTTTGCAAACTCCATAAATC+CGG | 0.480571 | 8_3:+41916851 | Msa1288740:CDS |
| TTGGTCCGCGTCAATATGAT+TGG | 0.481663 | 8_3:+41914381 | Msa1288740:CDS |
| ATATGATTGGAATAGAAAAC+AGG | 0.497404 | 8_3:+41914394 | Msa1288740:CDS |
| ATGTTATCCGTGGATGAAAT+GGG | 0.498232 | 8_3:+41914974 | Msa1288740:CDS |
| AAACCGGAACCATCCGGAAA+AGG | 0.498684 | 8_3:-41915612 | None:intergenic |
| AGACTACGAATGGAACAGAT+AGG | 0.502738 | 8_3:+41916917 | Msa1288740:CDS |
| GTGAAGGGTTTGAATTTGAA+AGG | 0.505474 | 8_3:-41913158 | None:intergenic |
| TTGGTCATTCCATTTACAAA+GGG | 0.507287 | 8_3:+41913519 | Msa1288740:CDS |
| AACTACCTTCCGCCTTTGAA+AGG | 0.515428 | 8_3:-41915046 | None:intergenic |
| GTGTGATTAGCCTTGGTGCA+AGG | 0.517803 | 8_3:+41914999 | Msa1288740:CDS |
| TTTGAAATGTGCTAAATGGC+TGG | 0.518436 | 8_3:+41916997 | Msa1288740:three_prime_UTR |
| GTTGGTAGTGAAAAGTTTGA+GGG | 0.523331 | 8_3:-41913108 | None:intergenic |
| GTGATGGTGGTTGTGAGTGT+AGG | 0.526375 | 8_3:-41913049 | None:intergenic |
| CGGATTTATGGAGTTTGCAA+AGG | 0.530016 | 8_3:-41916850 | None:intergenic |
| TTGCCACCTAGGGTTTATGT+TGG | 0.531185 | 8_3:+41913500 | Msa1288740:CDS |
| GTATGCCAACCTAGAAGGTA+TGG | 0.531319 | 8_3:-41916828 | None:intergenic |
| CACTATCACTCCTAGACCAC+CGG | 0.536143 | 8_3:+41913553 | Msa1288740:CDS |
| GTTGGTCATTCCATTTACAA+AGG | 0.542041 | 8_3:+41913518 | Msa1288740:CDS |
| TGTGATTAGCCTTGGTGCAA+GGG | 0.548806 | 8_3:+41915000 | Msa1288740:CDS |
| CACACTTCCCATTTCATCCA+CGG | 0.549418 | 8_3:-41914981 | None:intergenic |
| GAGATGGTGATGTTATTGCT+TGG | 0.554865 | 8_3:+41917062 | Msa1288740:three_prime_UTR |
| TTCGCCGCTGCGGAATACTC+CGG | 0.560202 | 8_3:-41916870 | None:intergenic |
| TCATGCCATACCTTCTAGGT+TGG | 0.568540 | 8_3:+41916823 | Msa1288740:CDS |
| TCATTCCATTTACAAAGGGA+AGG | 0.568592 | 8_3:+41913523 | Msa1288740:CDS |
| TGATGAAGGCAAAGTCAGAA+AGG | 0.570422 | 8_3:+41915575 | Msa1288740:CDS |
| GACTACGAATGGAACAGATA+GGG | 0.588595 | 8_3:+41916918 | Msa1288740:CDS |
| ATTAGCATTGTTCGCCGCTG+CGG | 0.595298 | 8_3:-41916880 | None:intergenic |
| TCAAGACAAAACTGCGAACG+TGG | 0.600551 | 8_3:+41916114 | Msa1288740:CDS |
| GTGGCGGCATCTGATAGTGA+AGG | 0.601597 | 8_3:-41913174 | None:intergenic |
| AATGCTAATCCAAGATATGG+TGG | 0.607036 | 8_3:+41916894 | Msa1288740:CDS |
| ATGGGAAGTGTGATTAGCCT+TGG | 0.609938 | 8_3:+41914992 | Msa1288740:CDS |
| ATGATCCTTTCAAAGGCGGA+AGG | 0.610678 | 8_3:+41915041 | Msa1288740:CDS |
| ATATTGACGCGGACCAACAG+AGG | 0.614731 | 8_3:-41914375 | None:intergenic |
| TTTCATGATCCTTTCAAAGG+CGG | 0.614878 | 8_3:+41915037 | Msa1288740:CDS |
| GAAGAAGTTGATGAGAGTGA+TGG | 0.614882 | 8_3:-41913065 | None:intergenic |
| GAATGACCAACATAAACCCT+AGG | 0.616287 | 8_3:-41913506 | None:intergenic |
| GAAGTTGATGAGAGTGATGG+TGG | 0.624699 | 8_3:-41913062 | None:intergenic |
| AGGGGCATACAAGATATCTA+GGG | 0.628813 | 8_3:+41914325 | Msa1288740:CDS |
| ACGCTTATACTTACATCCAA+AGG | 0.634632 | 8_3:-41913584 | None:intergenic |
| AAGTACCTGAAGGATTGTTG+GGG | 0.636095 | 8_3:-41913250 | None:intergenic |
| CATGTTATGATTAGTGCGTG+TGG | 0.637115 | 8_3:+41917087 | Msa1288740:three_prime_UTR |
| CTTAACTTAAACAAGTAACA+AGG | 0.637648 | 8_3:+41917322 | Msa1288740:intron |
| TCCAAAGGCGCGAATTCCGG+TGG | 0.638065 | 8_3:-41913569 | None:intergenic |
| CTATTCCAATCATATTGACG+CGG | 0.644850 | 8_3:-41914386 | None:intergenic |
| GGTTGAAAACGTCAGAGTGG+CGG | 0.645736 | 8_3:-41913190 | None:intergenic |
| TGGCGGCATCTGATAGTGAA+GGG | 0.645904 | 8_3:-41913173 | None:intergenic |
| ATAACTCTGCTTTAGATACA+GGG | 0.647998 | 8_3:-41916153 | None:intergenic |
| TATTGACGCGGACCAACAGA+GGG | 0.649243 | 8_3:-41914374 | None:intergenic |
| GATATGGTGGAGACTACGAA+TGG | 0.656703 | 8_3:+41916907 | Msa1288740:CDS |
| GCATACAAGATATCTAGGGA+TGG | 0.666950 | 8_3:+41914329 | Msa1288740:CDS |
| CACAAGACTCCCTTGCACCA+AGG | 0.667591 | 8_3:-41915009 | None:intergenic |
| AGTACCTGAAGGATTGTTGG+GGG | 0.683200 | 8_3:-41913249 | None:intergenic |
| GCAGCTGTTCATGTTATCCG+TGG | 0.684413 | 8_3:+41914964 | Msa1288740:intron |
| TGACCAACATAAACCCTAGG+TGG | 0.694993 | 8_3:-41913503 | None:intergenic |
| GTACCTGAAGGATTGTTGGG+GGG | 0.710902 | 8_3:-41913248 | None:intergenic |
| AAGGGTTGAAAACGTCAGAG+TGG | 0.718016 | 8_3:-41913193 | None:intergenic |
| AAATCCGGAGTATTCCGCAG+CGG | 0.752636 | 8_3:+41916866 | Msa1288740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATGAAACTTTTTTAAAAT+GGG | - | chr8_3:41913333-41913352 | None:intergenic | 10.0% |
| !!! | AAAATGAAACTTTTTTAAAA+TGG | - | chr8_3:41913334-41913353 | None:intergenic | 10.0% |
| !! | TATTGTGTAATTAATTAATT+AGG | - | chr8_3:41915901-41915920 | None:intergenic | 10.0% |
| !!! | ATTAATTGTTTTAGAAATTT+TGG | + | chr8_3:41917034-41917053 | Msa1288740:three_prime_UTR | 10.0% |
| !!! | AATGAAACTTTTTTAAAATG+GGG | - | chr8_3:41913332-41913351 | None:intergenic | 15.0% |
| !!! | AAAGTTTCATTTTTTGTTTT+TGG | + | chr8_3:41913341-41913360 | Msa1288740:intron | 15.0% |
| !!! | TGTTTGTATTTTGTAATTTA+TGG | + | chr8_3:41914424-41914443 | Msa1288740:intron | 15.0% |
| !!! | GTTTGTATTTTGTAATTTAT+GGG | + | chr8_3:41914425-41914444 | Msa1288740:intron | 15.0% |
| !! | AATCCTATTATAAAACAATT+AGG | - | chr8_3:41915085-41915104 | None:intergenic | 15.0% |
| !! | AAATGAAATATATCTAGATT+CGG | - | chr8_3:41915443-41915462 | None:intergenic | 15.0% |
| !! | TAGTAATAATTAAAGAGAAT+TGG | + | chr8_3:41917139-41917158 | Msa1288740:three_prime_UTR | 15.0% |
| !! | AGAAAAAAAAAAAAGAGAAT+TGG | + | chr8_3:41917269-41917288 | Msa1288740:intron | 15.0% |
| !! | GATATCTTAAATAAGTAATA+AGG | + | chr8_3:41917291-41917310 | Msa1288740:intron | 15.0% |
| !! | ACTATGTATAATGAAATTGT+TGG | + | chr8_3:41913388-41913407 | Msa1288740:intron | 20.0% |
| !! | ATGCTAACATATGATTATTT+AGG | + | chr8_3:41913923-41913942 | Msa1288740:intron | 20.0% |
| !!! | TGACGTATGATTATTTATTT+TGG | + | chr8_3:41914204-41914223 | Msa1288740:intron | 20.0% |
| !!! | AGAATTGAATGTTTTTAATG+TGG | + | chr8_3:41914278-41914297 | Msa1288740:intron | 20.0% |
| !!! | TTTTTTGAAAACTTAAGTCA+TGG | + | chr8_3:41914501-41914520 | Msa1288740:intron | 20.0% |
| !!! | TTTTTGAAAACTTAAGTCAT+GGG | + | chr8_3:41914502-41914521 | Msa1288740:intron | 20.0% |
| !!! | CTTCCTAATTGTTTTATAAT+AGG | + | chr8_3:41915079-41915098 | Msa1288740:intron | 20.0% |
| !!! | TTCATTTTATGTTTGTTGTA+TGG | + | chr8_3:41915456-41915475 | Msa1288740:intron | 20.0% |
| !!! | TCATTTTATGTTTGTTGTAT+GGG | + | chr8_3:41915457-41915476 | Msa1288740:intron | 20.0% |
| !! | TGATGCAAAAATTGAAAATA+AGG | - | chr8_3:41915673-41915692 | None:intergenic | 20.0% |
| !! | TTGAAAGATGATATAGATTA+TGG | - | chr8_3:41915987-41916006 | None:intergenic | 20.0% |
| !!! | CTTTATATGGCATTTTTTAA+AGG | + | chr8_3:41916088-41916107 | Msa1288740:intron | 20.0% |
| !!! | TTCAACCTGATTAATATTTT+TGG | + | chr8_3:41916782-41916801 | Msa1288740:intron | 20.0% |
| !! | AAAAGCCAAAAATATTAATC+AGG | - | chr8_3:41916790-41916809 | None:intergenic | 20.0% |
| !!! | TCTAAAACAATTAATCTAAC+AGG | - | chr8_3:41917029-41917048 | None:intergenic | 20.0% |
| !!! | TCTTTCTATTTTTTGTAGAT+AGG | - | chr8_3:41917252-41917271 | None:intergenic | 20.0% |
| !! | AAAAGCATGTTAGAGAAAAT+GGG | - | chr8_3:41913293-41913312 | None:intergenic | 25.0% |
| !! | AAAAAGCATGTTAGAGAAAA+TGG | - | chr8_3:41913294-41913313 | None:intergenic | 25.0% |
| !!! | TACAAAATGTTGTCATTTTG+CGG | + | chr8_3:41913735-41913754 | Msa1288740:intron | 25.0% |
| ! | TTGTACTAAATCGTGTATAA+TGG | - | chr8_3:41913804-41913823 | None:intergenic | 25.0% |
| ! | ATATGATTGGAATAGAAAAC+AGG | + | chr8_3:41914394-41914413 | Msa1288740:CDS | 25.0% |
| ! | TAGCATAAATGGTTTAATTG+TGG | - | chr8_3:41914534-41914553 | None:intergenic | 25.0% |
| ! | TTCGAATCAAATAGCATAAA+TGG | - | chr8_3:41914545-41914564 | None:intergenic | 25.0% |
| ! | AAATACTATGTCATGAAATG+TGG | + | chr8_3:41914568-41914587 | Msa1288740:intron | 25.0% |
| ! | AATACTATGTCATGAAATGT+GGG | + | chr8_3:41914569-41914588 | Msa1288740:intron | 25.0% |
| !!! | ACTATTAAGAGTGTTAATCT+TGG | + | chr8_3:41914602-41914621 | Msa1288740:intron | 25.0% |
| ! | AATAGCATATTAGCATATCA+TGG | - | chr8_3:41914693-41914712 | None:intergenic | 25.0% |
| ! | GCAAAATACACAAAAAATAG+TGG | - | chr8_3:41914792-41914811 | None:intergenic | 25.0% |
| ! | TGATTATGATGTTCTTTGTA+TGG | + | chr8_3:41914874-41914893 | Msa1288740:intron | 25.0% |
| !! | TTGTAGTTGTTTAAAATGTG+AGG | + | chr8_3:41914922-41914941 | Msa1288740:intron | 25.0% |
| !!! | TTTTTTCATGATCCTTTCAA+AGG | + | chr8_3:41915034-41915053 | Msa1288740:CDS | 25.0% |
| !! | TCGGTATTTTCAATTTGAAA+AGG | + | chr8_3:41915356-41915375 | Msa1288740:intron | 25.0% |
| !!! | GGTTTTGATGTTATAAATCA+TGG | + | chr8_3:41915498-41915517 | Msa1288740:intron | 25.0% |
| !! | ACTGCATAAAAAGACATTTT+CGG | - | chr8_3:41915556-41915575 | None:intergenic | 25.0% |
| ! | TGTATTTATGATGACAACTT+AGG | - | chr8_3:41915942-41915961 | None:intergenic | 25.0% |
| ! | AGCAGATATTGCATAAAAAT+AGG | - | chr8_3:41916014-41916033 | None:intergenic | 25.0% |
| ! | AAAAAATGCCATATAAAGTC+AGG | - | chr8_3:41916086-41916105 | None:intergenic | 25.0% |
| ! | TACTAAGAGTTGTCAAATAA+CGG | + | chr8_3:41916555-41916574 | Msa1288740:intron | 25.0% |
| ! | CTTAACTTAAACAAGTAACA+AGG | + | chr8_3:41917322-41917341 | Msa1288740:intron | 25.0% |
| AAGTGTAAGTGAGACATTAT+CGG | - | chr8_3:41913026-41913045 | None:intergenic | 30.0% | |
| ! | TTTGAAAGGAAGAGAGTTTT+TGG | - | chr8_3:41913147-41913166 | None:intergenic | 30.0% |
| !! | TAGAGAAAATGGGTTAAAGA+GGG | - | chr8_3:41913283-41913302 | None:intergenic | 30.0% |
| !! | TTAGAGAAAATGGGTTAAAG+AGG | - | chr8_3:41913284-41913303 | None:intergenic | 30.0% |
| AAGACACTAGGAATATGTAA+AGG | + | chr8_3:41913414-41913433 | Msa1288740:intron | 30.0% | |
| AGACACTAGGAATATGTAAA+GGG | + | chr8_3:41913415-41913434 | Msa1288740:intron | 30.0% | |
| GGTTGTATTTGTTTGTGTAA+TGG | + | chr8_3:41913436-41913455 | Msa1288740:intron | 30.0% | |
| TTGGTCATTCCATTTACAAA+GGG | + | chr8_3:41913519-41913538 | Msa1288740:CDS | 30.0% | |
| ATTAAATCCATCGCGTATAA+TGG | - | chr8_3:41913716-41913735 | None:intergenic | 30.0% | |
| AGCACATATTTAATAAACCG+TGG | + | chr8_3:41913773-41913792 | Msa1288740:intron | 30.0% | |
| ATTGACTAAATCGCGTATAA+TGG | - | chr8_3:41914014-41914033 | None:intergenic | 30.0% | |
| AGCACATATTTGATAAACCA+CGG | + | chr8_3:41913685-41913704 | Msa1288740:intron | 30.0% | |
| !! | TACAAAGTGTTGTCAATTTG+CGG | + | chr8_3:41914103-41914122 | Msa1288740:intron | 30.0% |
| ! | GTTTTTAATGTGGAACGTTT+TGG | + | chr8_3:41914288-41914307 | Msa1288740:intron | 30.0% |
| ! | TTTTGGTGAATTTTGTAGTC+AGG | + | chr8_3:41914305-41914324 | Msa1288740:intron | 30.0% |
| ! | TTTGGTGAATTTTGTAGTCA+GGG | + | chr8_3:41914306-41914325 | Msa1288740:intron | 30.0% |
| AAGTTCTTATATGATCTGAC+AGG | + | chr8_3:41914472-41914491 | Msa1288740:intron | 30.0% | |
| AAACAATGTCAAACTCTATC+AGG | - | chr8_3:41914845-41914864 | None:intergenic | 30.0% | |
| TGCAGTAAAAATCTAAGCAA+TGG | - | chr8_3:41915129-41915148 | None:intergenic | 30.0% | |
| TCTGTATGAACTGACATATA+TGG | - | chr8_3:41915245-41915264 | None:intergenic | 30.0% | |
| ! | TTTTATTGAACGTCCATATG+TGG | + | chr8_3:41915387-41915406 | Msa1288740:intron | 30.0% |
| !!! | TTTTATGTTTGTTGTATGGG+TGG | + | chr8_3:41915460-41915479 | Msa1288740:intron | 30.0% |
| ACTGAGGTTAAAAAAGAAAC+CGG | - | chr8_3:41915631-41915650 | None:intergenic | 30.0% | |
| ATGAAGAAAGAACATTACTG+AGG | - | chr8_3:41915647-41915666 | None:intergenic | 30.0% | |
| TTGTACAGAACTGAATCAAT+CGG | - | chr8_3:41915821-41915840 | None:intergenic | 30.0% | |
| TGATTCAGTTCTGTACAAAA+AGG | + | chr8_3:41915823-41915842 | Msa1288740:intron | 30.0% | |
| ! | ATAACTCTGCTTTAGATACA+GGG | - | chr8_3:41916156-41916175 | None:intergenic | 30.0% |
| ! | TGTATCTAAAGCAGAGTTAT+CGG | + | chr8_3:41916156-41916175 | Msa1288740:CDS | 30.0% |
| ACATTGCAATTAGAAATCAG+AGG | - | chr8_3:41916211-41916230 | None:intergenic | 30.0% | |
| AATACAGTGTTGTCAATTAG+CGG | + | chr8_3:41916477-41916496 | Msa1288740:intron | 30.0% | |
| AGTGAATGAATAAACATGAC+AGG | - | chr8_3:41916681-41916700 | None:intergenic | 30.0% | |
| AACAATGCTAATCCAAGATA+TGG | + | chr8_3:41916891-41916910 | Msa1288740:CDS | 30.0% | |
| !! | CAACTTTGAAATGTGCTAAA+TGG | + | chr8_3:41916993-41917012 | Msa1288740:three_prime_UTR | 30.0% |
| !! | GTTGGTAGTGAAAAGTTTGA+GGG | - | chr8_3:41913111-41913130 | None:intergenic | 35.0% |
| !! | TGTTGGTAGTGAAAAGTTTG+AGG | - | chr8_3:41913112-41913131 | None:intergenic | 35.0% |
| TTTGGAAGAGAAAGAGTTGT+TGG | - | chr8_3:41913129-41913148 | None:intergenic | 35.0% | |
| GTGAAGGGTTTGAATTTGAA+AGG | - | chr8_3:41913161-41913180 | None:intergenic | 35.0% | |
| ! | AATTGTTGGTGAAAGACACT+AGG | + | chr8_3:41913402-41913421 | Msa1288740:intron | 35.0% |
| !! | GTTTGTGTAATGGACTAACT+TGG | + | chr8_3:41913446-41913465 | Msa1288740:intron | 35.0% |
| TTTGTGTGTGTGTGTTTAGT+TGG | + | chr8_3:41913473-41913492 | Msa1288740:intron | 35.0% | |
| GTTGGTCATTCCATTTACAA+AGG | + | chr8_3:41913518-41913537 | Msa1288740:CDS | 35.0% | |
| TCATTCCATTTACAAAGGGA+AGG | + | chr8_3:41913523-41913542 | Msa1288740:CDS | 35.0% | |
| ACGCTTATACTTACATCCAA+AGG | - | chr8_3:41913587-41913606 | None:intergenic | 35.0% | |
| TACGCGATTTAGTCAATTTG+CGG | + | chr8_3:41914017-41914036 | Msa1288740:intron | 35.0% | |
| ATACGTCAGCATTGTCAATT+GGG | - | chr8_3:41914192-41914211 | None:intergenic | 35.0% | |
| ! | TTGGTGAATTTTGTAGTCAG+GGG | + | chr8_3:41914307-41914326 | Msa1288740:intron | 35.0% |
| CTATTCCAATCATATTGACG+CGG | - | chr8_3:41914389-41914408 | None:intergenic | 35.0% | |
| TTGTAATTTATGGGTGACGA+TGG | + | chr8_3:41914434-41914453 | Msa1288740:intron | 35.0% | |
| TTGCTAAAATTCTGCAACAC+TGG | - | chr8_3:41914658-41914677 | None:intergenic | 35.0% | |
| !!! | TATTTTGCTGTTGACAACAC+TGG | + | chr8_3:41914804-41914823 | Msa1288740:intron | 35.0% |
| !! | CAAACTCTATCAGGTTTTGT+TGG | - | chr8_3:41914836-41914855 | None:intergenic | 35.0% |
| ! | TGTTCTTTGTATGGTTCTGT+TGG | + | chr8_3:41914883-41914902 | Msa1288740:intron | 35.0% |
| ! | GTTTAAAATGTGAGGTCATC+TGG | + | chr8_3:41914930-41914949 | Msa1288740:intron | 35.0% |
| ATGTTATCCGTGGATGAAAT+GGG | + | chr8_3:41914974-41914993 | Msa1288740:CDS | 35.0% | |
| TTTCATGATCCTTTCAAAGG+CGG | + | chr8_3:41915037-41915056 | Msa1288740:CDS | 35.0% | |
| ! | TTTTTCTATGAGAGTGGACA+TGG | + | chr8_3:41915163-41915182 | Msa1288740:intron | 35.0% |
| TATGTCAGTTCATACAGATC+TGG | + | chr8_3:41915247-41915266 | Msa1288740:intron | 35.0% | |
| ATGTCAGTTCATACAGATCT+GGG | + | chr8_3:41915248-41915267 | Msa1288740:intron | 35.0% | |
| TTGATTGAACAGTCCAAATG+TGG | - | chr8_3:41915312-41915331 | None:intergenic | 35.0% | |
| ACTGTTCAATCAAGATCTCA+CGG | + | chr8_3:41915319-41915338 | Msa1288740:intron | 35.0% | |
| ! | GTCTTTTTATGCAGTGATGA+AGG | + | chr8_3:41915561-41915580 | Msa1288740:intron | 35.0% |
| ! | TTTGAAGATTGAGCCTTTTC+CGG | + | chr8_3:41915599-41915618 | Msa1288740:CDS | 35.0% |
| !! | TCCTTTCCATATTCAAGTTG+CGG | + | chr8_3:41915708-41915727 | Msa1288740:intron | 35.0% |
| GTACTGAAATGTATAGACAC+TGG | + | chr8_3:41915845-41915864 | Msa1288740:intron | 35.0% | |
| ! | GATAACTCTGCTTTAGATAC+AGG | - | chr8_3:41916157-41916176 | None:intergenic | 35.0% |
| TGCAATTAGAAATCAGAGGT+AGG | - | chr8_3:41916207-41916226 | None:intergenic | 35.0% | |
| !! | ACTATAAGAGCATCACATCA+TGG | - | chr8_3:41916242-41916261 | None:intergenic | 35.0% |
| GTGATGCTCTTATAGTTCAA+TGG | + | chr8_3:41916246-41916265 | Msa1288740:intron | 35.0% | |
| ! | CAATGGAATTTGCTTGACAA+TGG | - | chr8_3:41916366-41916385 | None:intergenic | 35.0% |
| AAAAAGACATGTACCTAGTG+TGG | - | chr8_3:41916394-41916413 | None:intergenic | 35.0% | |
| ACATAGTAGTGCTTCAACAA+AGG | + | chr8_3:41916707-41916726 | Msa1288740:intron | 35.0% | |
| TATATCATGCCATACCTTCT+AGG | + | chr8_3:41916819-41916838 | Msa1288740:CDS | 35.0% | |
| CTTTGCAAACTCCATAAATC+CGG | + | chr8_3:41916851-41916870 | Msa1288740:CDS | 35.0% | |
| AATGCTAATCCAAGATATGG+TGG | + | chr8_3:41916894-41916913 | Msa1288740:CDS | 35.0% | |
| ! | TTTGAAATGTGCTAAATGGC+TGG | + | chr8_3:41916997-41917016 | Msa1288740:three_prime_UTR | 35.0% |
| !!! | AGAAATTTTGGCTCTTGAGA+TGG | + | chr8_3:41917046-41917065 | Msa1288740:three_prime_UTR | 35.0% |
| GATATCATGCCGAAATTGTT+AGG | + | chr8_3:41917161-41917180 | Msa1288740:intron | 35.0% | |
| ATAAACTCACACACACAAAG+TGG | - | chr8_3:41917223-41917242 | None:intergenic | 35.0% | |
| !! | GAAGAAGTTGATGAGAGTGA+TGG | - | chr8_3:41913068-41913087 | None:intergenic | 40.0% |
| AAGTACCTGAAGGATTGTTG+GGG | - | chr8_3:41913253-41913272 | None:intergenic | 40.0% | |
| ! | GAAGTACCTGAAGGATTGTT+GGG | - | chr8_3:41913254-41913273 | None:intergenic | 40.0% |
| !! | AGAAGTACCTGAAGGATTGT+TGG | - | chr8_3:41913255-41913274 | None:intergenic | 40.0% |
| !! | GGGAAAAAAGAAGTACCTGA+AGG | - | chr8_3:41913263-41913282 | None:intergenic | 40.0% |
| GAATGACCAACATAAACCCT+AGG | - | chr8_3:41913509-41913528 | None:intergenic | 40.0% | |
| ! | CGCGTATAATGGAACAATCA+TGG | - | chr8_3:41913705-41913724 | None:intergenic | 40.0% |
| GATTGTTCCATTATACGCGA+TGG | + | chr8_3:41913706-41913725 | Msa1288740:intron | 40.0% | |
| !!! | TTGTCATTTTGCGGCTATAG+TGG | + | chr8_3:41913744-41913763 | Msa1288740:intron | 40.0% |
| !! | TACAAAGTGCTGTCGATTTG+CGG | + | chr8_3:41913819-41913838 | Msa1288740:intron | 40.0% |
| TTGTCGAACTTTGGCTATAG+TGG | + | chr8_3:41913954-41913973 | Msa1288740:intron | 40.0% | |
| TAGTCAATTTGCGGCTATAG+TGG | + | chr8_3:41914026-41914045 | Msa1288740:intron | 40.0% | |
| TTGTTCCACTATACGCGATT+TGG | + | chr8_3:41914080-41914099 | Msa1288740:intron | 40.0% | |
| TTGTACCAAATCGCGTATAG+TGG | - | chr8_3:41914088-41914107 | None:intergenic | 40.0% | |
| TTGTCAATTTGCGGCTATAG+TGG | + | chr8_3:41914112-41914131 | Msa1288740:intron | 40.0% | |
| CATACGTCAGCATTGTCAAT+TGG | - | chr8_3:41914193-41914212 | None:intergenic | 40.0% | |
| ! | AGGGGCATACAAGATATCTA+GGG | + | chr8_3:41914325-41914344 | Msa1288740:CDS | 40.0% |
| GCATACAAGATATCTAGGGA+TGG | + | chr8_3:41914329-41914348 | Msa1288740:CDS | 40.0% | |
| TTATATGATCTGACAGGTGC+TGG | + | chr8_3:41914478-41914497 | Msa1288740:intron | 40.0% | |
| CATGTTATCCGTGGATGAAA+TGG | + | chr8_3:41914973-41914992 | Msa1288740:CDS | 40.0% | |
| ! | TGCCTCTTTTTCTATGAGAG+TGG | + | chr8_3:41915157-41915176 | Msa1288740:intron | 40.0% |
| GTCCACTCTCATAGAAAAAG+AGG | - | chr8_3:41915162-41915181 | None:intergenic | 40.0% | |
| AACACATAGTCAGCCACATA+TGG | - | chr8_3:41915403-41915422 | None:intergenic | 40.0% | |
| ATATGTGGCTGACTATGTGT+TGG | + | chr8_3:41915402-41915421 | Msa1288740:intron | 40.0% | |
| TGATGAAGGCAAAGTCAGAA+AGG | + | chr8_3:41915575-41915594 | Msa1288740:CDS | 40.0% | |
| AAAAAGAAACCGGAACCATC+CGG | - | chr8_3:41915621-41915640 | None:intergenic | 40.0% | |
| ATAGTGCCGCAACTTGAATA+TGG | - | chr8_3:41915717-41915736 | None:intergenic | 40.0% | |
| ATATAAAGTCAGGACTCGAG+AGG | - | chr8_3:41916076-41916095 | None:intergenic | 40.0% | |
| TCTCGAGTCCTGACTTTATA+TGG | + | chr8_3:41916075-41916094 | Msa1288740:intron | 40.0% | |
| ! | GGTTCTACGCTCAATTTTCA+AGG | + | chr8_3:41916177-41916196 | Msa1288740:CDS | 40.0% |
| CTATTCAGTGTTGTCGATCA+CGG | - | chr8_3:41916634-41916653 | None:intergenic | 40.0% | |
| ACAACACTGAATAGCTCAAC+AGG | + | chr8_3:41916640-41916659 | Msa1288740:intron | 40.0% | |
| CGGATTTATGGAGTTTGCAA+AGG | - | chr8_3:41916853-41916872 | None:intergenic | 40.0% | |
| AGACTACGAATGGAACAGAT+AGG | + | chr8_3:41916917-41916936 | Msa1288740:CDS | 40.0% | |
| GACTACGAATGGAACAGATA+GGG | + | chr8_3:41916918-41916937 | Msa1288740:CDS | 40.0% | |
| ! | GAGATGGTGATGTTATTGCT+TGG | + | chr8_3:41917062-41917081 | Msa1288740:three_prime_UTR | 40.0% |
| CATGTTATGATTAGTGCGTG+TGG | + | chr8_3:41917087-41917106 | Msa1288740:three_prime_UTR | 40.0% | |
| !! | GAAGTTGATGAGAGTGATGG+TGG | - | chr8_3:41913065-41913084 | None:intergenic | 45.0% |
| AAGGGTTGAAAACGTCAGAG+TGG | - | chr8_3:41913196-41913215 | None:intergenic | 45.0% | |
| AGTACCTGAAGGATTGTTGG+GGG | - | chr8_3:41913252-41913271 | None:intergenic | 45.0% | |
| TTGCCACCTAGGGTTTATGT+TGG | + | chr8_3:41913500-41913519 | Msa1288740:CDS | 45.0% | |
| TGACCAACATAAACCCTAGG+TGG | - | chr8_3:41913506-41913525 | None:intergenic | 45.0% | |
| AGCAGCCTTCCCTTTGTAAA+TGG | - | chr8_3:41913531-41913550 | None:intergenic | 45.0% | |
| ! | CGTGTATAATGGAACGACCA+CGG | - | chr8_3:41913793-41913812 | None:intergenic | 45.0% |
| GACAACGTGTTGTCGAACTT+TGG | + | chr8_3:41913945-41913964 | Msa1288740:intron | 45.0% | |
| ! | CAGGGGCATACAAGATATCT+AGG | + | chr8_3:41914324-41914343 | Msa1288740:CDS | 45.0% |
| TTGGTCCGCGTCAATATGAT+TGG | + | chr8_3:41914381-41914400 | Msa1288740:CDS | 45.0% | |
| ! | ATGGTTCTGTTGGAGCTACA+AGG | + | chr8_3:41914893-41914912 | Msa1288740:intron | 45.0% |
| TTCTGTTGGAGCTACAAGGT+TGG | + | chr8_3:41914897-41914916 | Msa1288740:intron | 45.0% | |
| CACACTTCCCATTTCATCCA+CGG | - | chr8_3:41914984-41915003 | None:intergenic | 45.0% | |
| !! | ATGGGAAGTGTGATTAGCCT+TGG | + | chr8_3:41914992-41915011 | Msa1288740:CDS | 45.0% |
| !! | TGTGATTAGCCTTGGTGCAA+GGG | + | chr8_3:41915000-41915019 | Msa1288740:CDS | 45.0% |
| ATGATCCTTTCAAAGGCGGA+AGG | + | chr8_3:41915041-41915060 | Msa1288740:CDS | 45.0% | |
| AACTACCTTCCGCCTTTGAA+AGG | - | chr8_3:41915049-41915068 | None:intergenic | 45.0% | |
| !! | CACGGTCTAGATTTCTAGCT+CGG | + | chr8_3:41915337-41915356 | Msa1288740:intron | 45.0% |
| TCAAAACCTGTTCCCACATG+TGG | - | chr8_3:41915486-41915505 | None:intergenic | 45.0% | |
| ! | AAGATTGAGCCTTTTCCGGA+TGG | + | chr8_3:41915603-41915622 | Msa1288740:CDS | 45.0% |
| GCCGCAACTTGAATATGGAA+AGG | - | chr8_3:41915712-41915731 | None:intergenic | 45.0% | |
| TCAAGACAAAACTGCGAACG+TGG | + | chr8_3:41916114-41916133 | Msa1288740:CDS | 45.0% | |
| TTCCATTGTCTGACCACACT+AGG | + | chr8_3:41916378-41916397 | Msa1288740:intron | 45.0% | |
| TACCTAGTGTGGTCAGACAA+TGG | - | chr8_3:41916383-41916402 | None:intergenic | 45.0% | |
| AATTAGCGGTCATAGCGTAG+CGG | + | chr8_3:41916491-41916510 | Msa1288740:intron | 45.0% | |
| TCACGGATCGCAAAAAATGG+TGG | - | chr8_3:41916617-41916636 | None:intergenic | 45.0% | |
| CGATCACGGATCGCAAAAAA+TGG | - | chr8_3:41916620-41916639 | None:intergenic | 45.0% | |
| TCATGCCATACCTTCTAGGT+TGG | + | chr8_3:41916823-41916842 | Msa1288740:CDS | 45.0% | |
| GTATGCCAACCTAGAAGGTA+TGG | - | chr8_3:41916831-41916850 | None:intergenic | 45.0% | |
| ! | CAAAGGTATGCCAACCTAGA+AGG | - | chr8_3:41916836-41916855 | None:intergenic | 45.0% |
| TGCGGAATACTCCGGATTTA+TGG | - | chr8_3:41916865-41916884 | None:intergenic | 45.0% | |
| TCGTAGTCTCCACCATATCT+TGG | - | chr8_3:41916906-41916925 | None:intergenic | 45.0% | |
| ! | GATATGGTGGAGACTACGAA+TGG | + | chr8_3:41916907-41916926 | Msa1288740:CDS | 45.0% |
| TCATGCCGAAATTGTTAGGC+CGG | + | chr8_3:41917165-41917184 | Msa1288740:intron | 45.0% | |
| GACATCCGGCCTAACAATTT+CGG | - | chr8_3:41917173-41917192 | None:intergenic | 45.0% | |
| AACTCACACACACAAAGTGG+AGG | - | chr8_3:41917220-41917239 | None:intergenic | 45.0% | |
| !! | GTGATGGTGGTTGTGAGTGT+AGG | - | chr8_3:41913052-41913071 | None:intergenic | 50.0% |
| ! | TGGCGGCATCTGATAGTGAA+GGG | - | chr8_3:41913176-41913195 | None:intergenic | 50.0% |
| GGTTGAAAACGTCAGAGTGG+CGG | - | chr8_3:41913193-41913212 | None:intergenic | 50.0% | |
| GTACCTGAAGGATTGTTGGG+GGG | - | chr8_3:41913251-41913270 | None:intergenic | 50.0% | |
| TAGTTGGAGCTTTGCCACCT+AGG | + | chr8_3:41913489-41913508 | Msa1288740:intron | 50.0% | |
| AGTTGGAGCTTTGCCACCTA+GGG | + | chr8_3:41913490-41913509 | Msa1288740:intron | 50.0% | |
| CACTATCACTCCTAGACCAC+CGG | + | chr8_3:41913553-41913572 | Msa1288740:CDS | 50.0% | |
| ! | ACATCCAAAGGCGCGAATTC+CGG | - | chr8_3:41913575-41913594 | None:intergenic | 50.0% |
| !! | CTGTCGATTTGCGGCTATAG+TGG | + | chr8_3:41913828-41913847 | Msa1288740:intron | 50.0% |
| TATTGACGCGGACCAACAGA+GGG | - | chr8_3:41914377-41914396 | None:intergenic | 50.0% | |
| ATATTGACGCGGACCAACAG+AGG | - | chr8_3:41914378-41914397 | None:intergenic | 50.0% | |
| AGCATTGCTGCGTTGCATAG+CGG | + | chr8_3:41914754-41914773 | Msa1288740:intron | 50.0% | |
| GCAGCTGTTCATGTTATCCG+TGG | + | chr8_3:41914964-41914983 | Msa1288740:intron | 50.0% | |
| !! | GTGTGATTAGCCTTGGTGCA+AGG | + | chr8_3:41914999-41915018 | Msa1288740:CDS | 50.0% |
| TTGTATGGGTGGCCACATGT+GGG | + | chr8_3:41915471-41915490 | Msa1288740:intron | 50.0% | |
| AAACCGGAACCATCCGGAAA+AGG | - | chr8_3:41915615-41915634 | None:intergenic | 50.0% | |
| ! | AAATCCGGAGTATTCCGCAG+CGG | + | chr8_3:41916866-41916885 | Msa1288740:CDS | 50.0% |
| ATTAGCATTGTTCGCCGCTG+CGG | - | chr8_3:41916883-41916902 | None:intergenic | 50.0% | |
| GTTAGGCCGGATGTCATGAT+CGG | + | chr8_3:41917178-41917197 | Msa1288740:intron | 50.0% | |
| TTAGGCCGGATGTCATGATC+GGG | + | chr8_3:41917179-41917198 | Msa1288740:intron | 50.0% | |
| ! | GTGGCGGCATCTGATAGTGA+AGG | - | chr8_3:41913177-41913196 | None:intergenic | 55.0% |
| ! | GGATTGTTGGGGGGTGTAGT+GGG | - | chr8_3:41913242-41913261 | None:intergenic | 55.0% |
| ! | AGGATTGTTGGGGGGTGTAG+TGG | - | chr8_3:41913243-41913262 | None:intergenic | 55.0% |
| ACACCCCCCAACAATCCTTC+AGG | + | chr8_3:41913245-41913264 | Msa1288740:CDS | 55.0% | |
| ! | CGCGTATAGTGGAACAACCG+TGG | - | chr8_3:41914077-41914096 | None:intergenic | 55.0% |
| CTTCAGTTTGCGCCCTCTGT+TGG | + | chr8_3:41914362-41914381 | Msa1288740:CDS | 55.0% | |
| CACAAGACTCCCTTGCACCA+AGG | - | chr8_3:41915012-41915031 | None:intergenic | 55.0% | |
| TGCACGCAGTCAGCCACATT+TGG | + | chr8_3:41915296-41915315 | Msa1288740:intron | 55.0% | |
| GTTGTATGGGTGGCCACATG+TGG | + | chr8_3:41915470-41915489 | Msa1288740:intron | 55.0% | |
| ! | GAGCCTTTTCCGGATGGTTC+CGG | + | chr8_3:41915609-41915628 | Msa1288740:CDS | 55.0% |
| TAGGCCGGATGTCATGATCG+GGG | + | chr8_3:41917180-41917199 | Msa1288740:intron | 55.0% | |
| CGAACCCCGATCATGACATC+CGG | - | chr8_3:41917187-41917206 | None:intergenic | 55.0% | |
| CATGATCGGGGTTCGAACCT+CGG | + | chr8_3:41917192-41917211 | Msa1288740:intron | 55.0% | |
| !! | CACACAAAGTGGAGGTACCG+AGG | - | chr8_3:41917212-41917231 | None:intergenic | 55.0% |
| GAGGGGGGTTTGGAGGAGAA+GGG | - | chr8_3:41913214-41913233 | None:intergenic | 60.0% | |
| ! | TTGTTGGGGGGTGTAGTGGG+AGG | - | chr8_3:41913239-41913258 | None:intergenic | 60.0% |
| ACCACCGGAATTCGCGCCTT+TGG | + | chr8_3:41913568-41913587 | Msa1288740:CDS | 60.0% | |
| ! | TCCAAAGGCGCGAATTCCGG+TGG | - | chr8_3:41913572-41913591 | None:intergenic | 60.0% |
| GCTGACTGCGTGCAGTCATG+GGG | - | chr8_3:41915290-41915309 | None:intergenic | 60.0% | |
| GGCTGACTGCGTGCAGTCAT+GGG | - | chr8_3:41915291-41915310 | None:intergenic | 60.0% | |
| TGGCTGACTGCGTGCAGTCA+TGG | - | chr8_3:41915292-41915311 | None:intergenic | 60.0% | |
| TTCGCCGCTGCGGAATACTC+CGG | - | chr8_3:41916873-41916892 | None:intergenic | 60.0% | |
| GGAGGGGGGTTTGGAGGAGA+AGG | - | chr8_3:41913215-41913234 | None:intergenic | 65.0% | |
| ! | GTGTAGTGGGAGGAGGAGGG+GGG | - | chr8_3:41913229-41913248 | None:intergenic | 65.0% |
| ! | GGTGTAGTGGGAGGAGGAGG+GGG | - | chr8_3:41913230-41913249 | None:intergenic | 65.0% |
| ! | GGGTGTAGTGGGAGGAGGAG+GGG | - | chr8_3:41913231-41913250 | None:intergenic | 65.0% |
| ! | GGGGTGTAGTGGGAGGAGGA+GGG | - | chr8_3:41913232-41913251 | None:intergenic | 65.0% |
| ! | TTGGGGGGTGTAGTGGGAGG+AGG | - | chr8_3:41913236-41913255 | None:intergenic | 65.0% |
| GGCGCGAATTCCGGTGGTCT+AGG | - | chr8_3:41913566-41913585 | None:intergenic | 65.0% | |
| GGGTGGCCACATGTGGGAAC+AGG | + | chr8_3:41915477-41915496 | Msa1288740:intron | 65.0% | |
| GGAGGAGGAGGGGGGTTTGG+AGG | - | chr8_3:41913221-41913240 | None:intergenic | 70.0% | |
| GTGGGAGGAGGAGGGGGGTT+TGG | - | chr8_3:41913224-41913243 | None:intergenic | 70.0% | |
| ! | GGGGGTGTAGTGGGAGGAGG+AGG | - | chr8_3:41913233-41913252 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 41912949 | 41917364 | 41912949 | ID=Msa1288740;Name=Msa1288740 |
| chr8_3 | mRNA | 41912949 | 41917364 | 41912949 | ID=Msa1288740-mRNA-1;Parent=Msa1288740;Name=Msa1288740-mRNA-1;_AED=0.09;_eAED=0.09;_QI=80|0.85|0.87|1|0.85|0.75|8|265|263 |
| chr8_3 | exon | 41912949 | 41913266 | 41912949 | ID=Msa1288740-mRNA-1:exon:11497;Parent=Msa1288740-mRNA-1 |
| chr8_3 | exon | 41913492 | 41913592 | 41913492 | ID=Msa1288740-mRNA-1:exon:11498;Parent=Msa1288740-mRNA-1 |
| chr8_3 | exon | 41914323 | 41914415 | 41914323 | ID=Msa1288740-mRNA-1:exon:11499;Parent=Msa1288740-mRNA-1 |
| chr8_3 | exon | 41914968 | 41915062 | 41914968 | ID=Msa1288740-mRNA-1:exon:11500;Parent=Msa1288740-mRNA-1 |
| chr8_3 | exon | 41915575 | 41915630 | 41915575 | ID=Msa1288740-mRNA-1:exon:11501;Parent=Msa1288740-mRNA-1 |
| chr8_3 | exon | 41916110 | 41916198 | 41916110 | ID=Msa1288740-mRNA-1:exon:11502;Parent=Msa1288740-mRNA-1 |
| chr8_3 | exon | 41916819 | 41917166 | 41916819 | ID=Msa1288740-mRNA-1:exon:11503;Parent=Msa1288740-mRNA-1 |
| chr8_3 | exon | 41917328 | 41917364 | 41917328 | ID=Msa1288740-mRNA-1:exon:11504;Parent=Msa1288740-mRNA-1 |
| chr8_3 | five_prime_UTR | 41912949 | 41913028 | 41912949 | ID=Msa1288740-mRNA-1:five_prime_utr;Parent=Msa1288740-mRNA-1 |
| chr8_3 | CDS | 41913029 | 41913266 | 41913029 | ID=Msa1288740-mRNA-1:cds;Parent=Msa1288740-mRNA-1 |
| chr8_3 | CDS | 41913492 | 41913592 | 41913492 | ID=Msa1288740-mRNA-1:cds;Parent=Msa1288740-mRNA-1 |
| chr8_3 | CDS | 41914323 | 41914415 | 41914323 | ID=Msa1288740-mRNA-1:cds;Parent=Msa1288740-mRNA-1 |
| chr8_3 | CDS | 41914968 | 41915062 | 41914968 | ID=Msa1288740-mRNA-1:cds;Parent=Msa1288740-mRNA-1 |
| chr8_3 | CDS | 41915575 | 41915630 | 41915575 | ID=Msa1288740-mRNA-1:cds;Parent=Msa1288740-mRNA-1 |
| chr8_3 | CDS | 41916110 | 41916198 | 41916110 | ID=Msa1288740-mRNA-1:cds;Parent=Msa1288740-mRNA-1 |
| chr8_3 | CDS | 41916819 | 41916938 | 41916819 | ID=Msa1288740-mRNA-1:cds;Parent=Msa1288740-mRNA-1 |
| chr8_3 | three_prime_UTR | 41916939 | 41917166 | 41916939 | ID=Msa1288740-mRNA-1:three_prime_utr;Parent=Msa1288740-mRNA-1 |
| chr8_3 | three_prime_UTR | 41917328 | 41917364 | 41917328 | ID=Msa1288740-mRNA-1:three_prime_utr;Parent=Msa1288740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
