AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1290630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1290630 MtrunA17_Chr8g0364791 79.065 492 54 7 1 491 1 444 0.0 752
Msa1290630 MtrunA17_Chr8g0384201 71.571 503 105 9 1 485 1 483 0.0 684
Msa1290630 MtrunA17_Chr3g0130101 63.830 235 79 3 1 229 1 235 1.91e-104 316
Msa1290630 MtrunA17_Chr1g0201021 54.857 175 79 0 7 181 20 194 9.07e-65 219
Msa1290630 MtrunA17_Chr1g0197361 55.233 172 71 3 8 176 10 178 1.11e-64 219
Msa1290630 MtrunA17_Chr3g0092671 52.571 175 77 3 7 178 6 177 1.20e-62 213
Msa1290630 MtrunA17_Chr1g0197351 49.558 226 98 6 6 225 42 257 2.02e-60 206
Msa1290630 MtrunA17_Chr6g0481091 53.595 153 71 0 6 158 6 158 3.75e-55 184
Msa1290630 MtrunA17_Chr2g0309891 52.866 157 73 1 1 156 1 157 1.84e-53 183
Msa1290630 MtrunA17_Chr5g0433781 50.888 169 82 1 1 168 1 169 1.80e-52 187
Msa1290630 MtrunA17_Chr3g0109821 50.888 169 81 2 1 167 1 169 8.96e-52 186
Msa1290630 MtrunA17_Chr5g0428991 49.045 157 80 0 1 157 20 176 3.10e-50 181
Msa1290630 MtrunA17_Chr3g0128111 50.000 152 72 2 7 156 43 192 3.71e-49 169
Msa1290630 MtrunA17_Chr3g0128151 49.359 156 79 0 1 156 17 172 1.70e-48 176
Msa1290630 MtrunA17_Chr4g0056541 45.810 179 88 5 8 183 9 181 1.19e-47 168
Msa1290630 MtrunA17_Chr5g0400461 45.405 185 91 2 1 178 1 182 1.36e-47 167
Msa1290630 MtrunA17_Chr4g0054791 47.273 165 84 1 1 162 1 165 3.05e-47 166
Msa1290630 MtrunA17_Chr1g0200561 49.080 163 74 4 8 166 21 178 1.21e-46 165
Msa1290630 MtrunA17_Chr2g0309331 46.471 170 83 4 8 175 12 175 1.22e-46 165
Msa1290630 MtrunA17_Chr4g0060931 47.170 159 80 2 6 162 17 173 7.45e-46 163
Msa1290630 MtrunA17_Chr3g0091921 47.799 159 79 2 6 162 16 172 1.76e-45 161
Msa1290630 MtrunA17_Chr8g0372121 47.682 151 76 2 8 157 8 156 2.65e-45 160
Msa1290630 MtrunA17_Chr4g0017921 50.323 155 65 4 8 157 10 157 3.79e-45 161
Msa1290630 MtrunA17_Chr4g0018391 41.111 180 94 5 8 183 9 180 5.26e-45 160
Msa1290630 MtrunA17_Chr7g0217721 42.541 181 86 3 5 169 18 196 8.88e-45 160
Msa1290630 MtrunA17_Chr5g0398971 42.391 184 94 5 8 187 9 184 1.39e-44 160
Msa1290630 MtrunA17_Chr6g0453451 44.186 172 88 3 5 172 19 186 1.51e-44 159
Msa1290630 MtrunA17_Chr6g0484441 47.682 151 75 2 6 156 5 151 1.97e-44 159
Msa1290630 MtrunA17_Chr4g0076731 46.104 154 78 4 6 158 54 203 9.99e-44 159
Msa1290630 MtrunA17_Chr4g0038751 51.634 153 64 3 7 156 16 161 1.66e-43 155
Msa1290630 MtrunA17_Chr2g0316971 48.125 160 75 4 6 160 23 179 2.94e-43 157
Msa1290630 MtrunA17_Chr2g0318081 45.513 156 83 1 1 156 11 164 3.35e-43 156
Msa1290630 MtrunA17_Chr5g0405211 46.104 154 74 3 8 157 10 158 5.57e-43 155
Msa1290630 MtrunA17_Chr6g0453131 45.342 161 76 5 6 156 15 173 1.39e-42 155
Msa1290630 MtrunA17_Chr3g0124761 46.497 157 78 3 5 158 6 159 1.66e-42 152
Msa1290630 MtrunA17_Chr8g0361731 42.593 162 80 4 6 156 14 173 2.52e-42 155
Msa1290630 MtrunA17_Chr8g0346001 42.945 163 77 3 8 157 17 176 3.20e-42 155
Msa1290630 MtrunA17_Chr7g0253011 47.134 157 75 3 6 156 17 171 3.44e-42 154
Msa1290630 MtrunA17_Chr3g0139331 44.654 159 82 3 6 162 11 165 2.71e-41 151
Msa1290630 MtrunA17_Chr6g0461661 45.513 156 77 4 6 156 18 170 3.62e-41 151
Msa1290630 MtrunA17_Chr5g0417001 42.857 161 80 4 6 156 14 172 6.62e-41 151
Msa1290630 MtrunA17_Chr7g0217711 48.201 139 70 1 5 143 18 154 6.70e-41 144
Msa1290630 MtrunA17_Chr7g0252971 37.441 211 105 6 6 201 8 206 1.11e-40 149
Msa1290630 MtrunA17_Chr2g0318101 39.583 192 96 4 4 182 13 197 1.12e-39 147
Msa1290630 MtrunA17_Chr8g0359921 45.752 153 79 2 6 156 14 164 1.34e-39 145
Msa1290630 MtrunA17_Chr3g0130731 42.675 157 84 3 5 158 6 159 3.14e-39 144
Msa1290630 MtrunA17_Chr4g0042561 42.945 163 87 3 2 160 5 165 3.51e-39 143
Msa1290630 MtrunA17_Chr8g0384721 42.405 158 84 3 5 158 6 160 5.53e-39 143
Msa1290630 MtrunA17_Chr5g0417791 43.312 157 83 3 5 157 2 156 8.48e-38 139
Msa1290630 MtrunA17_Chr5g0442771 41.718 163 81 4 6 156 18 178 1.08e-37 140
Msa1290630 MtrunA17_Chr8g0345691 45.270 148 72 5 9 153 15 156 1.15e-37 142
Msa1290630 MtrunA17_Chr1g0147421 44.805 154 78 4 6 156 27 176 2.12e-37 140
Msa1290630 MtrunA17_Chr7g0214071 42.771 166 82 4 5 166 14 170 2.22e-37 137
Msa1290630 MtrunA17_Chr2g0312321 42.767 159 82 4 1 156 6 158 3.27e-37 139
Msa1290630 MtrunA17_Chr2g0311651 41.212 165 81 3 7 156 23 186 5.36e-37 138
Msa1290630 MtrunA17_Chr7g0263931 40.476 168 91 4 5 166 10 174 6.58e-37 138
Msa1290630 MtrunA17_Chr4g0047841 48.485 132 64 2 4 133 13 142 7.36e-37 139
Msa1290630 MtrunA17_Chr2g0326361 42.581 155 81 4 8 156 16 168 1.38e-36 137
Msa1290630 MtrunA17_Chr2g0311661 48.855 131 62 2 7 133 22 151 2.37e-36 136
Msa1290630 MtrunA17_Chr1g0183741 33.333 240 138 6 6 241 10 231 2.76e-36 135
Msa1290630 MtrunA17_Chr3g0144271 46.715 137 68 3 6 139 23 157 1.09e-35 137
Msa1290630 MtrunA17_Chr8g0345671 43.243 148 75 5 9 153 14 155 1.98e-35 136
Msa1290630 MtrunA17_Chr7g0261411 40.789 152 82 3 6 155 10 155 8.77e-35 132
Msa1290630 MtrunA17_Chr2g0321741 44.531 128 63 2 26 153 12 131 3.38e-34 132
Msa1290630 MtrunA17_Chr8g0345711 45.669 127 65 3 9 132 15 140 2.31e-33 124
Msa1290630 MtrunA17_Chr8g0345741 47.414 116 57 3 19 131 4 118 3.63e-33 123
Msa1290630 MtrunA17_Chr8g0385991 38.506 174 92 4 2 168 10 175 2.14e-32 123
Msa1290630 MtrunA17_Chr3g0131911 37.572 173 94 3 2 164 10 178 1.53e-31 121
Msa1290630 MtrunA17_Chr8g0345721 38.889 162 63 6 9 135 38 198 5.02e-31 119
Msa1290630 MtrunA17_Chr8g0345731 43.077 130 67 4 9 132 27 155 1.24e-30 117
Msa1290630 MtrunA17_Chr3g0113001 41.525 118 62 2 60 172 17 132 1.34e-28 115
Msa1290630 MtrunA17_Chr2g0321631 38.365 159 90 5 8 158 6 164 3.93e-28 112
Msa1290630 MtrunA17_Chr7g0266701 33.962 159 95 5 8 156 6 164 8.36e-26 106
Msa1290630 MtrunA17_Chr4g0026141 36.076 158 94 4 8 158 7 164 1.56e-25 105
Msa1290630 MtrunA17_Chr3g0113031 42.308 104 53 3 72 169 4 106 2.40e-25 105
Msa1290630 MtrunA17_Chr8g0345701 39.007 141 66 5 9 132 10 147 2.83e-25 102
Msa1290630 MtrunA17_Chr4g0050701 37.500 160 82 5 6 157 11 160 8.72e-25 101
Msa1290630 MtrunA17_Chr7g0243371 48.718 78 36 2 60 133 14 91 1.60e-19 84.3
Msa1290630 MtrunA17_Chr8g0384351 33.537 164 81 7 5 165 9 147 2.70e-18 82.8
Msa1290630 MtrunA17_Chr3g0130321 32.768 177 96 7 5 167 6 173 1.61e-15 75.5
Msa1290630 MtrunA17_Chr7g0251651 29.688 128 86 3 5 131 17 141 3.35e-13 68.6
Msa1290630 MtrunA17_Chr7g0251661 27.559 127 88 3 6 131 10 133 3.75e-12 64.3
Msa1290630 MtrunA17_Chr4g0040541 29.885 174 98 8 3 159 45 211 2.54e-11 64.3
Msa1290630 MtrunA17_Chr2g0282871 29.213 178 93 8 3 159 50 215 2.64e-11 64.7
Msa1290630 MtrunA17_Chr1g0168571 30.263 152 94 7 12 156 11 157 9.10e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1290630 AT5G09330.5 51.765 255 109 3 1 243 1 253 1.25e-86 275
Msa1290630 AT5G09330.2 51.765 255 109 3 1 243 1 253 1.25e-86 275
Msa1290630 AT5G09330.4 51.765 255 109 3 1 243 1 253 1.25e-86 275
Msa1290630 AT5G09330.3 51.765 255 109 3 1 243 1 253 1.25e-86 275
Msa1290630 AT5G09330.1 51.765 255 109 3 1 243 1 253 1.25e-86 275
Msa1290630 AT5G64060.1 54.741 232 95 2 1 228 1 226 7.84e-82 258
Msa1290630 AT5G04410.1 57.303 178 76 0 2 179 5 182 2.14e-73 242
Msa1290630 AT3G10500.1 57.059 170 73 0 2 171 5 174 4.14e-69 231
Msa1290630 AT3G10490.1 55.114 176 77 2 6 180 27 201 8.13e-67 215
Msa1290630 AT3G10480.1 56.322 174 74 2 6 178 27 199 3.92e-66 220
Msa1290630 AT3G10480.2 55.491 173 76 1 6 178 27 198 5.36e-66 219
Msa1290630 AT3G10490.2 55.114 176 77 2 6 180 27 201 5.70e-66 219
Msa1290630 AT3G10480.3 47.343 207 74 3 6 178 27 232 2.39e-59 204
Msa1290630 AT1G34180.3 47.826 184 90 1 7 184 17 200 2.90e-58 199
Msa1290630 AT1G34190.1 50.000 174 87 0 7 180 17 190 3.26e-58 202
Msa1290630 AT1G34180.1 47.826 184 90 1 7 184 17 200 1.96e-57 200
Msa1290630 AT3G17730.1 54.430 158 72 0 1 158 1 158 5.04e-56 187
Msa1290630 AT1G34180.4 44.898 196 90 2 7 184 17 212 7.11e-55 191
Msa1290630 AT1G34180.2 44.898 196 90 2 7 184 17 212 4.32e-54 191
Msa1290630 AT1G65910.1 49.701 167 84 0 1 167 1 167 2.69e-53 190
Msa1290630 AT3G49530.2 45.274 201 95 3 1 200 8 194 3.17e-53 185
Msa1290630 AT3G49530.1 45.274 201 95 3 1 200 8 194 1.11e-52 185
Msa1290630 AT1G33060.1 50.641 156 77 0 1 156 19 174 5.60e-52 187
Msa1290630 AT5G24590.2 50.633 158 77 1 1 157 8 165 5.84e-52 182
Msa1290630 AT1G33060.2 50.641 156 77 0 1 156 19 174 6.03e-52 187
Msa1290630 AT2G27300.1 50.980 153 67 2 1 153 9 153 5.10e-51 177
Msa1290630 AT3G03200.1 52.866 157 73 1 1 156 1 157 3.56e-49 176
Msa1290630 AT5G46590.1 52.597 154 69 3 6 156 6 158 7.02e-49 170
Msa1290630 AT4G17980.1 50.968 155 72 2 6 156 6 160 1.89e-48 168
Msa1290630 AT4G17980.2 50.000 160 76 2 1 156 1 160 3.98e-48 168
Msa1290630 AT5G17260.1 50.318 157 77 1 1 156 1 157 4.62e-48 172
Msa1290630 AT5G22290.1 49.020 153 71 2 1 153 16 161 2.76e-47 167
Msa1290630 AT4G35580.1 46.795 156 83 0 1 156 4 159 2.93e-47 171
Msa1290630 AT4G35580.3 46.795 156 83 0 1 156 4 159 3.54e-47 171
Msa1290630 AT5G46590.2 55.556 135 59 1 6 139 6 140 3.73e-47 165
Msa1290630 AT4G35580.2 46.795 156 83 0 1 156 4 159 3.75e-47 171
Msa1290630 AT5G61430.1 47.799 159 79 2 6 162 16 172 4.91e-47 166
Msa1290630 AT3G44290.2 47.368 152 72 2 2 153 10 153 8.62e-47 162
Msa1290630 AT1G54330.1 49.080 163 80 1 1 163 1 160 1.08e-46 164
Msa1290630 AT4G10350.1 48.701 154 72 2 8 157 11 161 1.50e-46 165
Msa1290630 AT1G12260.1 42.077 183 97 4 8 187 9 185 1.60e-46 166
Msa1290630 AT1G12260.2 42.077 183 97 4 8 187 9 185 1.73e-46 165
Msa1290630 AT1G62700.1 38.462 221 114 7 8 222 9 213 2.36e-46 166
Msa1290630 AT1G62700.2 38.462 221 114 7 8 222 9 213 2.36e-46 166
Msa1290630 AT1G33280.1 48.701 154 69 3 8 157 10 157 4.27e-46 163
Msa1290630 AT1G71930.2 46.203 158 78 3 8 162 11 164 5.08e-46 163
Msa1290630 AT1G71930.1 46.203 158 78 3 8 162 11 164 5.08e-46 163
Msa1290630 AT3G44290.1 47.368 152 72 2 2 153 10 153 1.10e-45 162
Msa1290630 AT5G39610.1 49.057 159 77 2 6 162 20 176 1.12e-45 161
Msa1290630 AT1G32870.1 49.405 168 81 2 6 171 10 175 1.46e-44 164
Msa1290630 AT1G32870.2 49.405 168 81 2 6 171 10 175 1.62e-44 164
Msa1290630 AT1G32510.1 45.283 159 79 2 6 156 6 164 2.16e-44 157
Msa1290630 AT5G07680.2 46.250 160 80 3 6 162 3 159 2.51e-44 158
Msa1290630 AT1G32870.3 49.405 168 81 2 6 171 46 211 3.64e-44 164
Msa1290630 AT5G07680.1 46.250 160 80 3 6 162 17 173 3.93e-44 158
Msa1290630 AT1G01720.1 43.085 188 96 4 5 184 6 190 9.73e-44 156
Msa1290630 AT2G24430.2 48.366 153 74 3 6 156 16 165 1.06e-43 157
Msa1290630 AT2G24430.1 48.366 153 74 3 6 156 16 165 1.06e-43 157
Msa1290630 AT4G36160.1 44.000 175 80 5 8 177 12 173 1.41e-43 158
Msa1290630 AT4G36160.3 44.000 175 80 5 8 177 12 173 1.41e-43 158
Msa1290630 AT4G27410.2 36.325 234 146 2 1 233 9 240 1.41e-43 156
Msa1290630 AT4G36160.2 44.000 175 80 5 8 177 16 177 1.81e-43 158
Msa1290630 AT2G18060.3 42.857 175 81 5 8 177 11 171 2.55e-43 157
Msa1290630 AT2G18060.1 42.857 175 81 5 8 177 11 171 2.55e-43 157
Msa1290630 AT2G02450.1 44.805 154 80 3 6 158 51 200 4.78e-43 157
Msa1290630 AT3G12977.1 44.099 161 87 2 1 160 13 171 7.70e-43 153
Msa1290630 AT5G62380.2 45.283 159 80 3 2 157 3 157 7.93e-43 155
Msa1290630 AT5G62380.1 45.283 159 80 3 2 157 3 157 7.93e-43 155
Msa1290630 AT2G02450.2 44.805 154 80 3 6 158 51 200 9.12e-43 157
Msa1290630 AT3G29035.1 46.061 165 85 2 8 170 26 188 1.26e-42 154
Msa1290630 AT2G43000.1 47.020 151 77 2 7 156 19 167 1.36e-42 152
Msa1290630 AT3G04060.1 45.625 160 82 3 3 159 17 174 1.43e-42 154
Msa1290630 AT1G79580.3 47.368 152 75 3 8 157 19 167 1.52e-42 155
Msa1290630 AT1G79580.5 47.368 152 75 3 8 157 19 167 1.52e-42 155
Msa1290630 AT1G79580.4 47.368 152 75 3 8 157 19 167 1.52e-42 155
Msa1290630 AT1G79580.2 47.368 152 75 3 8 157 19 167 1.52e-42 155
Msa1290630 AT1G79580.1 47.368 152 75 3 8 157 19 167 1.52e-42 155
Msa1290630 AT3G18400.1 44.586 157 84 2 6 162 5 158 2.16e-42 153
Msa1290630 AT5G18270.2 47.799 159 74 4 6 159 21 175 3.30e-42 153
Msa1290630 AT5G18270.1 47.170 159 75 4 6 159 21 175 4.09e-42 153
Msa1290630 AT1G69490.1 42.473 186 99 4 6 187 9 190 4.21e-42 151
Msa1290630 AT5G66300.1 43.636 165 89 3 8 170 14 176 6.18e-42 151
Msa1290630 AT1G26870.1 45.062 162 76 4 6 156 16 175 8.80e-42 154
Msa1290630 AT5G08790.1 44.304 158 80 3 6 158 7 161 1.21e-41 150
Msa1290630 AT4G27410.3 34.940 249 146 3 1 233 9 257 1.45e-41 151
Msa1290630 AT1G76420.1 47.097 155 77 3 6 158 22 173 1.57e-41 151
Msa1290630 AT2G46770.1 41.916 167 77 4 8 157 18 181 2.11e-41 152
Msa1290630 AT5G53950.1 49.359 156 71 4 6 156 17 169 2.12e-41 152
Msa1290630 AT1G77450.1 46.104 154 77 3 8 158 12 162 3.74e-41 148
Msa1290630 AT3G15500.1 43.949 157 86 1 1 157 9 163 5.26e-41 149
Msa1290630 AT1G52890.1 43.949 157 86 1 6 162 14 168 7.93e-41 149
Msa1290630 AT5G39820.1 40.805 174 78 4 6 156 20 191 1.07e-40 149
Msa1290630 AT2G17040.1 45.098 153 74 3 7 156 7 152 1.77e-40 147
Msa1290630 AT3G15170.1 45.625 160 79 4 8 162 22 178 3.13e-40 147
Msa1290630 AT3G61910.1 41.566 166 77 4 8 156 13 175 2.01e-39 146
Msa1290630 AT1G56010.2 40.331 181 94 4 1 173 14 188 3.51e-39 145
Msa1290630 AT1G32770.1 41.071 168 82 3 5 158 15 179 5.27e-39 145
Msa1290630 AT5G63790.1 42.405 158 83 3 6 158 50 204 1.29e-38 143
Msa1290630 AT5G63790.2 42.581 155 81 3 9 158 63 214 1.47e-38 143
Msa1290630 AT5G13180.1 45.122 164 82 3 2 163 10 167 5.09e-38 140
Msa1290630 AT1G61110.1 42.169 166 81 3 4 156 14 177 1.12e-37 140
Msa1290630 AT3G04070.2 42.331 163 80 3 6 156 10 170 2.68e-36 137
Msa1290630 AT3G15510.1 41.250 160 79 3 10 156 21 178 3.68e-36 137
Msa1290630 AT2G33480.2 44.872 156 79 2 2 157 11 159 5.57e-36 134
Msa1290630 AT2G33480.1 44.872 156 81 1 2 157 11 161 6.75e-36 134
Msa1290630 AT3G12910.1 39.521 167 81 4 7 156 22 185 1.21e-34 132
Msa1290630 AT4G28530.1 41.176 170 76 4 5 156 9 172 2.12e-34 132
Msa1290630 AT3G04070.1 37.430 179 82 3 6 156 10 186 3.09e-34 132
Msa1290630 AT4G01520.1 43.791 153 76 4 9 156 7 154 5.33e-34 130
Msa1290630 AT5G04395.1 45.139 144 65 3 8 137 30 173 6.89e-34 126
Msa1290630 AT4G01540.3 43.949 157 78 4 5 156 3 154 3.60e-33 130
Msa1290630 AT4G01540.4 44.444 153 75 4 9 156 7 154 4.72e-33 129
Msa1290630 AT4G01540.2 44.444 153 75 4 9 156 7 154 5.79e-33 130
Msa1290630 AT4G01540.1 44.444 153 75 4 9 156 7 154 8.12e-33 130
Msa1290630 AT3G12977.2 50.485 103 50 1 60 161 17 119 1.10e-32 124
Msa1290630 AT3G10490.4 54.902 102 44 2 80 180 1 101 2.08e-32 127
Msa1290630 AT3G10490.3 54.902 102 44 2 80 180 1 101 2.08e-32 127
Msa1290630 AT5G61430.2 50.476 105 50 1 60 162 5 109 5.21e-32 124
Msa1290630 AT1G52880.1 40.881 159 80 4 10 156 21 177 5.07e-31 122
Msa1290630 AT4G01550.1 36.866 217 112 8 5 209 3 206 7.06e-31 125
Msa1290630 AT4G10350.2 51.579 95 46 0 63 157 20 114 2.73e-30 120
Msa1290630 AT1G56010.1 43.590 117 63 1 60 173 5 121 2.41e-28 113
Msa1290630 AT3G44350.2 37.500 160 93 6 5 158 4 162 5.93e-26 106
Msa1290630 AT5G22380.1 34.783 161 98 5 5 158 4 164 2.88e-25 104
Msa1290630 AT3G44350.1 37.580 157 93 5 5 156 4 160 3.08e-24 99.4
Msa1290630 AT3G04420.2 37.333 150 87 4 9 156 6 150 1.10e-22 98.6
Msa1290630 AT2G33480.3 47.368 95 50 0 63 157 10 104 2.70e-22 95.5
Msa1290630 AT3G04420.1 37.333 150 87 4 9 156 6 150 3.43e-22 98.2
Msa1290630 AT1G02230.1 39.062 128 70 3 9 131 6 130 6.88e-22 97.4
Msa1290630 AT1G02250.1 37.984 129 72 4 9 132 6 131 1.52e-20 93.6
Msa1290630 AT4G28530.2 37.405 131 62 3 5 117 9 137 1.99e-19 89.4
Msa1290630 AT2G18060.2 41.935 93 40 3 87 177 3 83 1.81e-18 85.9
Msa1290630 AT1G02220.1 33.108 148 89 4 9 154 6 145 1.86e-18 87.8
Msa1290630 AT5G64530.1 39.394 132 64 5 6 135 3 120 3.68e-18 82.8
Msa1290630 AT5G64530.2 39.394 132 64 5 6 135 3 120 3.77e-18 82.0
Msa1290630 AT2G43000.2 42.529 87 49 1 71 156 3 89 1.49e-17 81.3
Msa1290630 AT5G22290.2 46.269 67 30 1 87 153 2 62 1.18e-16 79.7
Msa1290630 AT1G01010.1 32.692 156 86 6 9 153 6 153 6.07e-16 80.5
Msa1290630 AT3G56530.1 30.201 149 99 3 8 154 54 199 6.20e-14 73.2
Msa1290630 AT3G04430.1 30.435 138 72 6 12 132 6 136 3.85e-12 65.9
Msa1290630 AT4G28500.1 30.286 175 96 9 3 159 56 222 7.06e-11 63.9
Msa1290630 AT5G56620.2 29.167 240 118 12 6 210 43 265 7.36e-11 64.3
Msa1290630 AT5G56620.3 29.167 240 118 12 6 210 43 265 8.03e-11 64.3

Find 201 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAAACGATGATTCAATTT+TGG 0.123042 8_3:+45556670 None:intergenic
TCAATCTCCTCCTCCGATTT+AGG 0.161301 8_3:-45556715 Msa1290630:five_prime_UTR
CCCATATTGTGCACCATTCC+TGG 0.177058 8_3:+45555062 None:intergenic
CTCCAGTCTTCCTCATTAAA+TGG 0.199186 8_3:+45555036 None:intergenic
TTCGATGGCTATACCGAAAT+TGG 0.217229 8_3:-45556309 Msa1290630:exon
AGCAACCCGAGAAACGATTT+TGG 0.238011 8_3:-45556778 Msa1290630:five_prime_UTR
TGTGCGTCGGACTTAATATT+TGG 0.246104 8_3:-45553806 Msa1290630:three_prime_UTR
CTCCATGCTATTGGATATAA+TGG 0.269719 8_3:-45554919 Msa1290630:CDS
CCCAGGAATGGTGCACAATA+TGG 0.271510 8_3:-45555063 Msa1290630:CDS
CCTATTTGACGTTCATTTGC+AGG 0.272532 8_3:+45554532 None:intergenic
CAATCTCCTCCTCCGATTTA+GGG 0.274060 8_3:-45556714 Msa1290630:five_prime_UTR
CCTTTCCAGTATGAAATATC+AGG 0.282193 8_3:+45555882 None:intergenic
TAAAGACACATTGTTTGAAT+TGG 0.282968 8_3:-45553730 Msa1290630:three_prime_UTR
ATCCAATAGCATGGAGATTC+TGG 0.283199 8_3:+45554926 None:intergenic
CGAAACCCCGGAACCAATTT+CGG 0.285219 8_3:+45556296 None:intergenic
TTATCTCCAAAACGGGGATT+TGG 0.288256 8_3:-45556047 Msa1290630:CDS
TTTGGGAGACCTGGATTTCT+TGG 0.288518 8_3:-45554015 Msa1290630:CDS
CCTGTTTGCCGTGAATTTGC+AGG 0.290279 8_3:+45554493 None:intergenic
CCTGTTTGACATGAATTTGC+AGG 0.309691 8_3:+45554700 None:intergenic
CCTGTTTGACATGAATTTGC+AGG 0.309691 8_3:+45554796 None:intergenic
CCTGCAAATTCATGTCAAAT+AGG 0.314809 8_3:-45554658 Msa1290630:CDS
CCTATTTGACATGAATTTGC+AGG 0.318113 8_3:+45554658 None:intergenic
AGTAATGTGTTATTGTGATT+TGG 0.322666 8_3:-45553663 Msa1290630:three_prime_UTR
ATGAATCGATCTACGGAAAC+AGG 0.329353 8_3:-45555974 Msa1290630:CDS
GTAATGTGTTATTGTGATTT+GGG 0.329639 8_3:-45553662 Msa1290630:three_prime_UTR
CCTGTTTGACATGAATTTGC+AGG 0.330919 8_3:+45554754 None:intergenic
ATCTAGACTCCGAGATGTTC+TGG 0.337030 8_3:-45553908 Msa1290630:CDS
GACCAGAATCTCCATGCTAT+TGG 0.337192 8_3:-45554928 Msa1290630:CDS
CCTGCAAATGAACGTCAAAT+AGG 0.343176 8_3:-45554532 Msa1290630:CDS
CCTGTTTGACATGAATTTGC+TGG 0.344593 8_3:+45554850 None:intergenic
ACCACTCCAAATCCCCGTTT+TGG 0.346187 8_3:+45556041 None:intergenic
TTTCACTTTAGAACCTTGTT+TGG 0.353707 8_3:-45553521 Msa1290630:three_prime_UTR
GATCTACGGAAACAGGGTTT+TGG 0.358106 8_3:-45555967 Msa1290630:CDS
GGCTATACCGAAATTGGTTC+CGG 0.364984 8_3:-45556303 Msa1290630:CDS
ATTTATCTTATCTCCAAAAC+GGG 0.365480 8_3:-45556054 Msa1290630:CDS
CCTTCAAATTCATGTCAAAC+AGG 0.368528 8_3:-45554574 Msa1290630:CDS
AAAGACACATTGTTTGAATT+GGG 0.372063 8_3:-45553729 Msa1290630:three_prime_UTR
TGGCACTATTGCTGCTGTGC+TGG 0.372503 8_3:-45553786 Msa1290630:three_prime_UTR
CCAGAAGGTGATTTGGTCAT+TGG 0.375489 8_3:-45553763 Msa1290630:three_prime_UTR
TTGGGAGACCTGGATTTCTT+GGG 0.378844 8_3:-45554014 Msa1290630:CDS
GGGTTTCGATTCTCTCCAAC+TGG 0.381256 8_3:-45556281 Msa1290630:CDS
TTATGAACCTTGGCAAGCTT+TGG 0.384622 8_3:-45556625 Msa1290630:five_prime_UTR
GGATGACTACTTGGATTTCA+TGG 0.384800 8_3:-45553940 Msa1290630:CDS
AACTACTAAAATATATATAA+AGG 0.389993 8_3:+45553703 None:intergenic
GATTTGGTCATTGGCACATA+TGG 0.392401 8_3:-45553754 Msa1290630:three_prime_UTR
ATGTGCTAAAGTCAGCATTC+TGG 0.394807 8_3:+45553982 None:intergenic
GACTGATAGAGGAATTGTTC+AGG 0.397382 8_3:-45555798 Msa1290630:intron
CCAATGACCAAATCACCTTC+TGG 0.400154 8_3:+45553763 None:intergenic
TGATCAAATATTTCCTCAAA+AGG 0.402857 8_3:-45556250 Msa1290630:CDS
CTCGTGGGGATCGTACTGAT+TGG 0.405759 8_3:-45555856 Msa1290630:CDS
TAAAATCCAAAATCGTTTCT+CGG 0.418105 8_3:+45556772 None:intergenic
TGCCGTGAATTTGCAGGGTC+GGG 0.419129 8_3:+45554499 None:intergenic
GATTTATCTTATCTCCAAAA+CGG 0.426997 8_3:-45556055 Msa1290630:CDS
CCTGCAAATTCATGTCAAAC+AGG 0.428762 8_3:-45554754 Msa1290630:CDS
TGACGTTCATTTGCAGGATC+GGG 0.428773 8_3:+45554538 None:intergenic
TGACATGAATTTGCTGGATC+AGG 0.429635 8_3:+45554856 None:intergenic
AAGTCAGCATTCTGGCCAAC+AGG 0.430726 8_3:+45553990 None:intergenic
CCAGCAAATTCATGTCAAAC+AGG 0.434947 8_3:-45554850 Msa1290630:CDS
GCTATACCGAAATTGGTTCC+GGG 0.435182 8_3:-45556302 Msa1290630:CDS
GATAAGGATTTGACTGATAG+AGG 0.435530 8_3:-45555809 Msa1290630:CDS
CCATATTGTGCACCATTCCT+GGG 0.435926 8_3:+45555063 None:intergenic
AAAACCCTGATATTTCATAC+TGG 0.438226 8_3:-45555887 Msa1290630:CDS
TCATCGGCGGAACCCTAAAT+CGG 0.439007 8_3:+45556702 None:intergenic
TGACATGAATTTGCAGGGTA+GGG 0.440925 8_3:+45554664 None:intergenic
TGACATGAATTTGCAGGGTC+GGG 0.444499 8_3:+45554706 None:intergenic
TGACATGAATTTGCAGGGTC+GGG 0.444499 8_3:+45554802 None:intergenic
CTGGATTTCTTGGGACCTGT+TGG 0.445634 8_3:-45554005 Msa1290630:CDS
CATGAATTTGCAGGGTCAGC+GGG 0.445895 8_3:+45554457 None:intergenic
TGTCCGATAGGGAAGAAGTA+TGG 0.449188 8_3:-45556010 Msa1290630:CDS
CCTGTTTGACATGAATTTGA+AGG 0.451294 8_3:+45554574 None:intergenic
GTGCTGGCCAGAAGGTGATT+TGG 0.452395 8_3:-45553770 Msa1290630:three_prime_UTR
TGTCAAACAGGATTACAAAC+AGG 0.456291 8_3:-45554742 Msa1290630:CDS
TGTCAAACAGGATTACAAAC+AGG 0.456291 8_3:-45554838 Msa1290630:CDS
CTCCCGACCCTGCAAATTCA+CGG 0.457228 8_3:-45554501 Msa1290630:CDS
CCTGCAAATTCACGGCAAAC+AGG 0.457731 8_3:-45554493 Msa1290630:CDS
AAAATCCAAAATCGTTTCTC+GGG 0.458565 8_3:+45556773 None:intergenic
CCTGTGAATTCATGTCAAAC+AGG 0.460258 8_3:-45554616 Msa1290630:CDS
TGACATGAATTTGAAGGGTC+GGG 0.460660 8_3:+45554580 None:intergenic
GGAGATTGAATGATTTCAAT+CGG 0.460952 8_3:+45556729 None:intergenic
CAACAGAATAATCAAATTGT+GGG 0.461766 8_3:-45555917 Msa1290630:CDS
TGAGTATAGGCTTGAAGATA+AGG 0.462659 8_3:-45555825 Msa1290630:CDS
CGTCACTGGACTTGATCACT+AGG 0.464527 8_3:-45556581 Msa1290630:five_prime_UTR
CCAGGAATGGTGCACAATAT+GGG 0.464995 8_3:-45555062 Msa1290630:CDS
ATTGGGTTATGCATGAGTAT+AGG 0.467758 8_3:-45555838 Msa1290630:CDS
ATATCCATGCCATGTCAATC+AGG 0.469355 8_3:-45554892 Msa1290630:CDS
CCTGCAAATTCATGTCAAAC+AGG 0.469358 8_3:-45554700 Msa1290630:CDS
CCTGCAAATTCATGTCAAAC+AGG 0.469358 8_3:-45554796 Msa1290630:CDS
AAAAGGAAGGTCCTGGTCCC+AGG 0.470057 8_3:-45555080 Msa1290630:CDS
CACATACGGAATGGCTCCTA+CGG 0.471738 8_3:-45553964 Msa1290630:CDS
TTGACGTTCATTTGCAGGAT+CGG 0.471996 8_3:+45554537 None:intergenic
TGACATGAATTTGCAGGGTA+GGG 0.476112 8_3:+45554760 None:intergenic
CATATACAAATACGCACCTT+GGG 0.480163 8_3:-45556180 Msa1290630:CDS
TTGCCGTGAATTTGCAGGGT+CGG 0.484452 8_3:+45554498 None:intergenic
TTGACATGAATTTGCAGGGT+AGG 0.487996 8_3:+45554663 None:intergenic
AGTGCAGCTGGCTCAGCAAA+TGG 0.489746 8_3:+45554994 None:intergenic
AAAGTGGGAGCTAGTGCAGC+TGG 0.489936 8_3:+45554982 None:intergenic
TCGTGGGGATCGTACTGATT+GGG 0.493211 8_3:-45555855 Msa1290630:CDS
AACCATTTAATGAGGAAGAC+TGG 0.493900 8_3:-45555038 Msa1290630:CDS
CCTGTTTGACATGAATTCAC+AGG 0.497735 8_3:+45554616 None:intergenic
AAATTCATGTAAAACAAGAT+TGG 0.499270 8_3:-45554443 Msa1290630:CDS
AATCTGTAAGGTATTTCAAA+AGG 0.505571 8_3:-45555097 Msa1290630:CDS
ATCGTGAATGAACACGCTCT+TGG 0.506536 8_3:-45553610 Msa1290630:three_prime_UTR
CTGTTTGCCGTGAATTTGCA+GGG 0.507364 8_3:+45554494 None:intergenic
TTGATCAATTCAACTCCAGT+TGG 0.510807 8_3:+45556266 None:intergenic
TTGACATGAATTTGCAGGGT+AGG 0.514282 8_3:+45554759 None:intergenic
CTTCCATACTTCTTCCCTAT+CGG 0.514378 8_3:+45556007 None:intergenic
TTGACATGAATTTGCAGGGT+CGG 0.514389 8_3:+45554705 None:intergenic
TTGACATGAATTTGCAGGGT+CGG 0.514389 8_3:+45554801 None:intergenic
ACATATACAAATACGCACCT+TGG 0.514869 8_3:-45556181 Msa1290630:CDS
CTGTTTGACATGAATTTGAA+GGG 0.516573 8_3:+45554575 None:intergenic
CAACAGGTCCCAAGAAATCC+AGG 0.519008 8_3:+45554006 None:intergenic
GAATTTGCAGGGTCGGGAGA+AGG 0.521896 8_3:+45554712 None:intergenic
GAATTTGCAGGGTCGGGAGA+AGG 0.521896 8_3:+45554808 None:intergenic
GGATTCCTATGTAATCTGTA+AGG 0.523374 8_3:-45555109 Msa1290630:CDS
AGAAGTATGGAAGTGGGTCG+AGG 0.523425 8_3:-45555997 Msa1290630:CDS
TCAACAGAATAATCAAATTG+TGG 0.524176 8_3:-45555918 Msa1290630:CDS
TCAGAAAATATCATGCCAAA+AGG 0.525023 8_3:+45553833 None:intergenic
GAGTGCTGCGGAACCTAAGT+TGG 0.526230 8_3:-45553883 Msa1290630:CDS
TGGTATTTCTTCTGTCCGAT+AGG 0.528063 8_3:-45556022 Msa1290630:CDS
TTGACATGAATTTGAAGGGT+CGG 0.530544 8_3:+45554579 None:intergenic
TTCCTCAAAAGGAAAGTGAT+GGG 0.530868 8_3:-45556239 Msa1290630:CDS
CTGTTTGACATGAATTTGCA+GGG 0.532638 8_3:+45554701 None:intergenic
CTGTTTGACATGAATTTGCA+GGG 0.532638 8_3:+45554797 None:intergenic
CAATCCTGATTGACATGGCA+TGG 0.533909 8_3:+45554888 None:intergenic
TATGAATTATCCACAGGGTC+GGG 0.534846 8_3:+45554412 None:intergenic
GTGAATGAACACGCTCTTGG+TGG 0.535364 8_3:-45553607 Msa1290630:three_prime_UTR
TTTGATTTGATTCGATTCGA+TGG 0.536629 8_3:-45556324 Msa1290630:exon
AAATACCTTACAGATTACAT+AGG 0.536956 8_3:+45555104 None:intergenic
AACCATTATATCCAATAGCA+TGG 0.540691 8_3:+45554917 None:intergenic
TTATCCACAGGGTCGGGAGA+AGG 0.544235 8_3:+45554418 None:intergenic
TGATGATATGAATTATCCAC+AGG 0.545478 8_3:+45554364 None:intergenic
TGATGATATGAATTATCCAC+AGG 0.545478 8_3:+45554406 None:intergenic
TTTCCTCAAAAGGAAAGTGA+TGG 0.545620 8_3:-45556240 Msa1290630:CDS
AAATTCACGGCAAACAGGAT+TGG 0.546221 8_3:-45554488 Msa1290630:CDS
GAATTTGAAGGGTCGGGAGA+CGG 0.546357 8_3:+45554586 None:intergenic
AAAATATGAACGGTGACGAA+CGG 0.548311 8_3:+45556646 None:intergenic
TGAGACAATTATCAAAGGAA+AGG 0.549181 8_3:+45553637 None:intergenic
CTTTCCAGTATGAAATATCA+GGG 0.551975 8_3:+45555883 None:intergenic
GGTATTTCTTCTGTCCGATA+GGG 0.553898 8_3:-45556021 Msa1290630:CDS
AATGCTGACTTTAGCACATA+CGG 0.554890 8_3:-45553978 Msa1290630:CDS
TGTAAGGTATTTCAAAAGGA+AGG 0.556870 8_3:-45555093 Msa1290630:CDS
ACATACGGAATGGCTCCTAC+GGG 0.561143 8_3:-45553963 Msa1290630:CDS
GAAGGTCCTGGTCCCAGGAA+TGG 0.561485 8_3:-45555075 Msa1290630:CDS
GAATTTGCAGGGTAGGGAGA+AGG 0.564019 8_3:+45554670 None:intergenic
GAATTTGCAGGGTAGGGAGA+AGG 0.564019 8_3:+45554766 None:intergenic
GACTGGAGTGATGATGAAGT+AGG 0.564465 8_3:-45555021 Msa1290630:CDS
CTGTTTGACATGAATTTGCA+GGG 0.570287 8_3:+45554755 None:intergenic
TTGCTGCTGTGCTGGCCAGA+AGG 0.573325 8_3:-45553778 Msa1290630:three_prime_UTR
GGCCAGGAAAACAATGCTGA+AGG 0.577250 8_3:-45554065 Msa1290630:intron
TCATTTGCAGGATCGGGAGA+CGG 0.579173 8_3:+45554544 None:intergenic
ATATGAATTATCCACAGGGT+CGG 0.580394 8_3:+45554411 None:intergenic
GAATTTGCTGGATCAGGAGA+AGG 0.581218 8_3:+45554862 None:intergenic
ATAGGGAAGAAGTATGGAAG+TGG 0.581783 8_3:-45556004 Msa1290630:CDS
GTATTTCAAAAGGAAGGTCC+TGG 0.582263 8_3:-45555087 Msa1290630:CDS
ATACGGAATGGCTCCTACGG+GGG 0.584987 8_3:-45553961 Msa1290630:CDS
GTCACTGGACTTGATCACTA+GGG 0.585300 8_3:-45556580 Msa1290630:five_prime_UTR
TTAGATGTCACAGGCAAAGT+GGG 0.587463 8_3:+45554967 None:intergenic
TACTGGAAAGGCACCTCGTG+GGG 0.589079 8_3:-45555870 Msa1290630:CDS
ACAAAACTATTAGATGTCAC+AGG 0.590588 8_3:+45554958 None:intergenic
CTGTTTGACATGAATTCACA+GGG 0.594081 8_3:+45554617 None:intergenic
CCTGATATTTCATACTGGAA+AGG 0.594945 8_3:-45555882 Msa1290630:CDS
CTATTTGACATGAATTTGCA+GGG 0.594947 8_3:+45554659 None:intergenic
ATATGGGAAACCATTTAATG+AGG 0.595239 8_3:-45555046 Msa1290630:CDS
AGCACTCTGCCAGAACATCT+CGG 0.596496 8_3:+45553899 None:intergenic
TAACTACCTGGGAGATCCCA+AGG 0.602529 8_3:+45556164 None:intergenic
GCGGAACCCTAAATCGGAGG+AGG 0.603006 8_3:+45556708 None:intergenic
TTTGCAGGGTAGGGAGAAGG+TGG 0.603489 8_3:+45554673 None:intergenic
TTTGCAGGGTAGGGAGAAGG+TGG 0.603489 8_3:+45554769 None:intergenic
ATTAGATGTCACAGGCAAAG+TGG 0.604507 8_3:+45554966 None:intergenic
TGTGCACCATTCCTGGGACC+AGG 0.606475 8_3:+45555069 None:intergenic
TACGCACCTTGGGATCTCCC+AGG 0.607324 8_3:-45556170 Msa1290630:intron
TGACTTTAGCACATACGGAA+TGG 0.608742 8_3:-45553973 Msa1290630:CDS
GTCGAGGATGAATCGATCTA+CGG 0.611940 8_3:-45555981 Msa1290630:CDS
ACATGAATTTGCAGGGTCAG+CGG 0.613051 8_3:+45554456 None:intergenic
CAAGGTTCATAAAATATGAA+CGG 0.613595 8_3:+45556636 None:intergenic
GGCATCAATCCTGATTGACA+TGG 0.616405 8_3:+45554883 None:intergenic
TTTGCAGGGTCGGGAGAAGG+CGG 0.617658 8_3:+45554811 None:intergenic
ATACTGGAAAGGCACCTCGT+GGG 0.623402 8_3:-45555871 Msa1290630:CDS
CTATACCGAAATTGGTTCCG+GGG 0.624855 8_3:-45556301 Msa1290630:CDS
AGGAACACCAAAGCTTGCCA+AGG 0.628416 8_3:+45556618 None:intergenic
TCCAAAACGGGGATTTGGAG+TGG 0.632470 8_3:-45556042 Msa1290630:CDS
GAATTCACAGGGTCTACAGA+AGG 0.634919 8_3:+45554628 None:intergenic
TCCTCAAAAGGAAAGTGATG+GGG 0.636372 8_3:-45556238 Msa1290630:CDS
AACAGAATAATCAAATTGTG+GGG 0.640227 8_3:-45555916 Msa1290630:CDS
CATACTGGAAAGGCACCTCG+TGG 0.642917 8_3:-45555872 Msa1290630:CDS
CTTCAAATTCATGTCAAACA+GGG 0.645767 8_3:-45554573 Msa1290630:CDS
TGAATCGATCTACGGAAACA+GGG 0.649117 8_3:-45555973 Msa1290630:CDS
GATGTTCTGGCAGAGTGCTG+CGG 0.652067 8_3:-45553895 Msa1290630:CDS
TAGGGAAGAAGTATGGAAGT+GGG 0.665858 8_3:-45556003 Msa1290630:CDS
GTTGGAGAGAATCGAAACCC+CGG 0.668142 8_3:+45556284 None:intergenic
TCGGCGGAACCCTAAATCGG+AGG 0.672733 8_3:+45556705 None:intergenic
TTTATCTTATCTCCAAAACG+GGG 0.680682 8_3:-45556053 Msa1290630:CDS
CGACGACGGCATATTGCCTG+AGG 0.685187 8_3:-45554299 Msa1290630:intron
ATGCTTGATATGTTCGACGA+CGG 0.700120 8_3:-45554313 Msa1290630:CDS
CATACGGAATGGCTCCTACG+GGG 0.702272 8_3:-45553962 Msa1290630:CDS
GCTACGACAACAAACAACCT+CGG 0.727689 8_3:-45556374 Msa1290630:five_prime_UTR
GATGATATGAATTATCCACA+GGG 0.739152 8_3:+45554365 None:intergenic
GATGATATGAATTATCCACA+GGG 0.748736 8_3:+45554407 None:intergenic
AATTACAGAATTCAACACCG+AGG 0.767050 8_3:+45556357 None:intergenic
CAATCAGTACGATCCCCACG+AGG 0.773083 8_3:+45555857 None:intergenic
TGTTAATAATGATGACCCTG+TGG 0.779783 8_3:-45554380 Msa1290630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACTACTAAAATATATATAA+AGG + chr8_3:45556580-45556599 None:intergenic 10.0%
!!! AATAACATATTTCTATTTCA+AGG + chr8_3:45554891-45554910 None:intergenic 15.0%
!!! ATAGAAATATGTTATTTCAT+TGG - chr8_3:45554895-45554914 Msa1290630:CDS 15.0%
!!! CAATGAAAAATTCTTTATTT+TGG + chr8_3:45556425-45556444 None:intergenic 15.0%
!!! CAAAATAAAGAATTTTTCAT+TGG - chr8_3:45556423-45556442 Msa1290630:five_prime_UTR 15.0%
!! ATAAAAAAAAATTCCAAACA+AGG + chr8_3:45556775-45556794 None:intergenic 15.0%
!!! AATTACTATGAGCTTTATTA+GGG - chr8_3:45554540-45554559 Msa1290630:CDS 20.0%
!! GATTCATAGATATATTACAT+TGG - chr8_3:45554723-45554742 Msa1290630:CDS 20.0%
!! AGTAAAATATGCACTTTATA+AGG + chr8_3:45554956-45554975 None:intergenic 20.0%
!! ATTAACATGATTCTATTTCA+AGG + chr8_3:45554989-45555008 None:intergenic 20.0%
!! ATGATTAAAATATGCAAGAA+GGG + chr8_3:45555071-45555090 None:intergenic 20.0%
!! AATGATTAAAATATGCAAGA+AGG + chr8_3:45555072-45555091 None:intergenic 20.0%
!!! GCATATTTTAATCATTTGAT+TGG - chr8_3:45555076-45555095 Msa1290630:CDS 20.0%
!! AAATTCATGTAAAACAAGAT+TGG - chr8_3:45555837-45555856 Msa1290630:CDS 20.0%
!!! TGATGTTTCTTTTTTATGTA+TGG - chr8_3:45556057-45556076 Msa1290630:CDS 20.0%
!! ATCACAATCATTTAGTAAAA+TGG + chr8_3:45556141-45556160 None:intergenic 20.0%
! TAAAATCCAAAATCGTTTCT+CGG + chr8_3:45553511-45553530 None:intergenic 25.0%
!! AAAACGATGATTCAATTTTG+GGG + chr8_3:45553611-45553630 None:intergenic 25.0%
!! GAAAACGATGATTCAATTTT+GGG + chr8_3:45553612-45553631 None:intergenic 25.0%
!! TGAAAACGATGATTCAATTT+TGG + chr8_3:45553613-45553632 None:intergenic 25.0%
! CAAGGTTCATAAAATATGAA+CGG + chr8_3:45553647-45553666 None:intergenic 25.0%
!!! AAATTTTTTTTTGACGACTG+AGG - chr8_3:45553873-45553892 Msa1290630:CDS 25.0%
! TGATCAAATATTTCCTCAAA+AGG - chr8_3:45554030-45554049 Msa1290630:CDS 25.0%
! GTGAAATTAATTAACTACCT+GGG + chr8_3:45554130-45554149 None:intergenic 25.0%
! TGTGAAATTAATTAACTACC+TGG + chr8_3:45554131-45554150 None:intergenic 25.0%
! GATTTATCTTATCTCCAAAA+CGG - chr8_3:45554225-45554244 Msa1290630:intron 25.0%
! ATTTATCTTATCTCCAAAAC+GGG - chr8_3:45554226-45554245 Msa1290630:intron 25.0%
! TCAACAGAATAATCAAATTG+TGG - chr8_3:45554362-45554381 Msa1290630:CDS 25.0%
! CAACAGAATAATCAAATTGT+GGG - chr8_3:45554363-45554382 Msa1290630:CDS 25.0%
! AACAGAATAATCAAATTGTG+GGG - chr8_3:45554364-45554383 Msa1290630:CDS 25.0%
!!! GAATTACTATGAGCTTTATT+AGG - chr8_3:45554539-45554558 Msa1290630:CDS 25.0%
!!! TAAGTTAGCATTTTGATATG+TGG - chr8_3:45554570-45554589 Msa1290630:CDS 25.0%
!! AATTTTGAATGCACATGTAT+AGG - chr8_3:45554860-45554879 Msa1290630:CDS 25.0%
!! ATTTTGAATGCACATGTATA+GGG - chr8_3:45554861-45554880 Msa1290630:CDS 25.0%
! AATATGCACTTTATAAGGTA+AGG + chr8_3:45554951-45554970 None:intergenic 25.0%
!! AAAACAGCAAATCTCATTTT+GGG + chr8_3:45555029-45555048 None:intergenic 25.0%
!! AAAAACAGCAAATCTCATTT+TGG + chr8_3:45555030-45555049 None:intergenic 25.0%
! AATGTATTCACAATGAAAAC+AGG + chr8_3:45555114-45555133 None:intergenic 25.0%
!! ACATTTTTAACAAGCTCTTT+TGG - chr8_3:45555129-45555148 Msa1290630:intron 25.0%
! AAATACCTTACAGATTACAT+AGG + chr8_3:45555179-45555198 None:intergenic 25.0%
!! AATCTGTAAGGTATTTCAAA+AGG - chr8_3:45555183-45555202 Msa1290630:intron 25.0%
!!! TTGTTTTACATGAATTTGCA+GGG + chr8_3:45555834-45555853 None:intergenic 25.0%
! CAAGAAAACAAAAAAACACA+AGG + chr8_3:45556028-45556047 None:intergenic 25.0%
!!! CTTGTGTTTTTTTGTTTTCT+TGG - chr8_3:45556026-45556045 Msa1290630:CDS 25.0%
! AAAATGGCATTAACATTATG+AGG + chr8_3:45556125-45556144 None:intergenic 25.0%
!! CTGAATACTGACATTATTTT+TGG - chr8_3:45556194-45556213 Msa1290630:CDS 25.0%
! TAAAGACACATTGTTTGAAT+TGG - chr8_3:45556550-45556569 Msa1290630:five_prime_UTR 25.0%
! AAAGACACATTGTTTGAATT+GGG - chr8_3:45556551-45556570 Msa1290630:five_prime_UTR 25.0%
!! AGTAATGTGTTATTGTGATT+TGG - chr8_3:45556617-45556636 Msa1290630:five_prime_UTR 25.0%
!! GTAATGTGTTATTGTGATTT+GGG - chr8_3:45556618-45556637 Msa1290630:five_prime_UTR 25.0%
!!! TTTTCTGAGACAATTATCAA+AGG + chr8_3:45556651-45556670 None:intergenic 25.0%
! GAAAAAATGTATGCACAAAT+CGG + chr8_3:45556743-45556762 None:intergenic 25.0%
AAAATCCAAAATCGTTTCTC+GGG + chr8_3:45553510-45553529 None:intergenic 30.0%
! GAGAAACGATTTTGGATTTT+AGG - chr8_3:45553510-45553529 Msa1290630:three_prime_UTR 30.0%
GGAGATTGAATGATTTCAAT+CGG + chr8_3:45553554-45553573 None:intergenic 30.0%
!! ATTTTGGGGGAAAAATTCAT+CGG + chr8_3:45553597-45553616 None:intergenic 30.0%
! AAACGATGATTCAATTTTGG+GGG + chr8_3:45553610-45553629 None:intergenic 30.0%
! CGTTCATATTTTATGAACCT+TGG - chr8_3:45553645-45553664 Msa1290630:three_prime_UTR 30.0%
!! TTTGATTTGATTCGATTCGA+TGG - chr8_3:45553956-45553975 Msa1290630:CDS 30.0%
TTTATCTTATCTCCAAAACG+GGG - chr8_3:45554227-45554246 Msa1290630:intron 30.0%
AAAACCCTGATATTTCATAC+TGG - chr8_3:45554393-45554412 Msa1290630:CDS 30.0%
CTTTCCAGTATGAAATATCA+GGG + chr8_3:45554400-45554419 None:intergenic 30.0%
!!! GCATTTTAAAGTTTGAAGTG+TGG - chr8_3:45554806-45554825 Msa1290630:CDS 30.0%
! TTTTGAATGCACATGTATAG+GGG - chr8_3:45554862-45554881 Msa1290630:CDS 30.0%
!!! CTGTTTTTACATGATGAAGT+TGG - chr8_3:45555042-45555061 Msa1290630:CDS 30.0%
TATTCACAATGAAAACAGGA+CGG + chr8_3:45555110-45555129 None:intergenic 30.0%
! GGTTTGTCTTTTTAAATCAC+AGG - chr8_3:45555150-45555169 Msa1290630:intron 30.0%
! TGTAAGGTATTTCAAAAGGA+AGG - chr8_3:45555187-45555206 Msa1290630:intron 30.0%
ATATGGGAAACCATTTAATG+AGG - chr8_3:45555234-45555253 Msa1290630:intron 30.0%
ACAAAACTATTAGATGTCAC+AGG + chr8_3:45555325-45555344 None:intergenic 30.0%
AACCATTATATCCAATAGCA+TGG + chr8_3:45555366-45555385 None:intergenic 30.0%
CTATTTGACATGAATTTGCA+GGG + chr8_3:45555624-45555643 None:intergenic 30.0%
CTGTTTGACATGAATTTGAA+GGG + chr8_3:45555708-45555727 None:intergenic 30.0%
CTTCAAATTCATGTCAAACA+GGG - chr8_3:45555707-45555726 Msa1290630:intron 30.0%
!!! CTTGTTTTACATGAATTTGC+AGG + chr8_3:45555835-45555854 None:intergenic 30.0%
GATGATATGAATTATCCACA+GGG + chr8_3:45555876-45555895 None:intergenic 30.0%
TGATGATATGAATTATCCAC+AGG + chr8_3:45555877-45555896 None:intergenic 30.0%
GATGATATGAATTATCCACA+GGG + chr8_3:45555876-45555895 None:intergenic 30.0%
TGATGATATGAATTATCCAC+AGG + chr8_3:45555877-45555896 None:intergenic 30.0%
! TTAGTGTTTTCTACTCTTGT+AGG - chr8_3:45556082-45556101 Msa1290630:intron 30.0%
!!! CTATCAACTGACTTTTTTGA+TGG - chr8_3:45556242-45556261 Msa1290630:CDS 30.0%
!!! AACTGACTTTTTTGATGGTT+TGG - chr8_3:45556247-45556266 Msa1290630:CDS 30.0%
!!! ACTGACTTTTTTGATGGTTT+GGG - chr8_3:45556248-45556267 Msa1290630:CDS 30.0%
!!! CTTTATTTTGGATCCAACTT+AGG + chr8_3:45556413-45556432 None:intergenic 30.0%
! GAATTTTTCATTGGTCCTTT+TGG - chr8_3:45556432-45556451 Msa1290630:five_prime_UTR 30.0%
TCAGAAAATATCATGCCAAA+AGG + chr8_3:45556450-45556469 None:intergenic 30.0%
TGAGACAATTATCAAAGGAA+AGG + chr8_3:45556646-45556665 None:intergenic 30.0%
!! TTTCACTTTAGAACCTTGTT+TGG - chr8_3:45556759-45556778 Msa1290630:five_prime_UTR 30.0%
AAAATATGAACGGTGACGAA+CGG + chr8_3:45553637-45553656 None:intergenic 35.0%
! GTGACGAAAGAAGTTTTTGA+AGG + chr8_3:45553685-45553704 None:intergenic 35.0%
TCAAAAACTTCTTTCGTCAC+TGG - chr8_3:45553685-45553704 Msa1290630:three_prime_UTR 35.0%
AATTACAGAATTCAACACCG+AGG + chr8_3:45553926-45553945 None:intergenic 35.0%
TTGATCAATTCAACTCCAGT+TGG + chr8_3:45554017-45554036 None:intergenic 35.0%
TTTCCTCAAAAGGAAAGTGA+TGG - chr8_3:45554040-45554059 Msa1290630:CDS 35.0%
TTCCTCAAAAGGAAAGTGAT+GGG - chr8_3:45554041-45554060 Msa1290630:CDS 35.0%
ACATATACAAATACGCACCT+TGG - chr8_3:45554099-45554118 Msa1290630:intron 35.0%
CATATACAAATACGCACCTT+GGG - chr8_3:45554100-45554119 Msa1290630:intron 35.0%
CCTTTCCAGTATGAAATATC+AGG + chr8_3:45554401-45554420 None:intergenic 35.0%
CCTGATATTTCATACTGGAA+AGG - chr8_3:45554398-45554417 Msa1290630:CDS 35.0%
ATTGGGTTATGCATGAGTAT+AGG - chr8_3:45554442-45554461 Msa1290630:CDS 35.0%
TGAGTATAGGCTTGAAGATA+AGG - chr8_3:45554455-45554474 Msa1290630:CDS 35.0%
GATAAGGATTTGACTGATAG+AGG - chr8_3:45554471-45554490 Msa1290630:CDS 35.0%
TTATGTGCATCCACAATCAA+AGG + chr8_3:45554612-45554631 None:intergenic 35.0%
!! ACTCTTAGTGTTGATGCTAT+TGG - chr8_3:45554643-45554662 Msa1290630:CDS 35.0%
AATGCCATTAGTGACATAGT+AGG + chr8_3:45554763-45554782 None:intergenic 35.0%
GGATTCCTATGTAATCTGTA+AGG - chr8_3:45555171-45555190 Msa1290630:intron 35.0%
AACCATTTAATGAGGAAGAC+TGG - chr8_3:45555242-45555261 Msa1290630:intron 35.0%
CTCCATGCTATTGGATATAA+TGG - chr8_3:45555361-45555380 Msa1290630:intron 35.0%
TGTCAAACAGGATTACAAAC+AGG - chr8_3:45555442-45555461 Msa1290630:intron 35.0%
CTGTTTGACATGAATTTGCA+GGG + chr8_3:45555486-45555505 None:intergenic 35.0%
CTGTTTGACATGAATTTGCA+GGG + chr8_3:45555486-45555505 None:intergenic 35.0%
TGTCAAACAGGATTACAAAC+AGG - chr8_3:45555442-45555461 Msa1290630:intron 35.0%
CTGTTTGACATGAATTTGCA+GGG + chr8_3:45555486-45555505 None:intergenic 35.0%
CCTATTTGACATGAATTTGC+AGG + chr8_3:45555625-45555644 None:intergenic 35.0%
CCTGCAAATTCATGTCAAAT+AGG - chr8_3:45555622-45555641 Msa1290630:intron 35.0%
CTGTTTGACATGAATTCACA+GGG + chr8_3:45555666-45555685 None:intergenic 35.0%
TTGACATGAATTTGAAGGGT+CGG + chr8_3:45555704-45555723 None:intergenic 35.0%
CCTGTTTGACATGAATTTGA+AGG + chr8_3:45555709-45555728 None:intergenic 35.0%
CCTTCAAATTCATGTCAAAC+AGG - chr8_3:45555706-45555725 Msa1290630:intron 35.0%
ATATGAATTATCCACAGGGT+CGG + chr8_3:45555872-45555891 None:intergenic 35.0%
TGTTAATAATGATGACCCTG+TGG - chr8_3:45555900-45555919 Msa1290630:CDS 35.0%
AGCGACTCTTGATTTCTTTA+AGG - chr8_3:45556167-45556186 Msa1290630:intron 35.0%
!!! TACTGACATTATTTTTGGCC+AGG - chr8_3:45556199-45556218 Msa1290630:CDS 35.0%
!! AATGCTGACTTTAGCACATA+CGG - chr8_3:45556302-45556321 Msa1290630:CDS 35.0%
TTATGAACCTTGGCAAGCTT+TGG - chr8_3:45553655-45553674 Msa1290630:three_prime_UTR 40.0%
TTCGATGGCTATACCGAAAT+TGG - chr8_3:45553971-45553990 Msa1290630:CDS 40.0%
TCCTCAAAAGGAAAGTGATG+GGG - chr8_3:45554042-45554061 Msa1290630:CDS 40.0%
TTATCTCCAAAACGGGGATT+TGG - chr8_3:45554233-45554252 Msa1290630:intron 40.0%
TGGTATTTCTTCTGTCCGAT+AGG - chr8_3:45554258-45554277 Msa1290630:intron 40.0%
GGTATTTCTTCTGTCCGATA+GGG - chr8_3:45554259-45554278 Msa1290630:intron 40.0%
CTTCCATACTTCTTCCCTAT+CGG + chr8_3:45554276-45554295 None:intergenic 40.0%
! ATAGGGAAGAAGTATGGAAG+TGG - chr8_3:45554276-45554295 Msa1290630:intron 40.0%
! TAGGGAAGAAGTATGGAAGT+GGG - chr8_3:45554277-45554296 Msa1290630:intron 40.0%
ATGAATCGATCTACGGAAAC+AGG - chr8_3:45554306-45554325 Msa1290630:CDS 40.0%
TGAATCGATCTACGGAAACA+GGG - chr8_3:45554307-45554326 Msa1290630:CDS 40.0%
!!! GTTTTGGAAAGCTACTGGTA+AGG - chr8_3:45554329-45554348 Msa1290630:CDS 40.0%
GACTGATAGAGGAATTGTTC+AGG - chr8_3:45554482-45554501 Msa1290630:CDS 40.0%
TGAAGTTGTGCCTTTGATTG+TGG - chr8_3:45554599-45554618 Msa1290630:CDS 40.0%
TCCACCTACTATGTCACTAA+TGG - chr8_3:45554756-45554775 Msa1290630:CDS 40.0%
! GCATTGACCTCTTCTAAATG+CGG - chr8_3:45554778-45554797 Msa1290630:CDS 40.0%
CATTGACCTCTTCTAAATGC+GGG - chr8_3:45554779-45554798 Msa1290630:CDS 40.0%
ATTGACCTCTTCTAAATGCG+GGG - chr8_3:45554780-45554799 Msa1290630:CDS 40.0%
GTATTTCAAAAGGAAGGTCC+TGG - chr8_3:45555193-45555212 Msa1290630:intron 40.0%
CTCCAGTCTTCCTCATTAAA+TGG + chr8_3:45555247-45555266 None:intergenic 40.0%
TTAGATGTCACAGGCAAAGT+GGG + chr8_3:45555316-45555335 None:intergenic 40.0%
ATTAGATGTCACAGGCAAAG+TGG + chr8_3:45555317-45555336 None:intergenic 40.0%
ATCCAATAGCATGGAGATTC+TGG + chr8_3:45555357-45555376 None:intergenic 40.0%
ATATCCATGCCATGTCAATC+AGG - chr8_3:45555388-45555407 Msa1290630:intron 40.0%
!! TGACATGAATTTGCTGGATC+AGG + chr8_3:45555427-45555446 None:intergenic 40.0%
CCTGTTTGACATGAATTTGC+TGG + chr8_3:45555433-45555452 None:intergenic 40.0%
CCAGCAAATTCATGTCAAAC+AGG - chr8_3:45555430-45555449 Msa1290630:intron 40.0%
TTGACATGAATTTGCAGGGT+CGG + chr8_3:45555482-45555501 None:intergenic 40.0%
CCTGTTTGACATGAATTTGC+AGG + chr8_3:45555433-45555452 None:intergenic 40.0%
CCTGCAAATTCATGTCAAAC+AGG - chr8_3:45555484-45555503 Msa1290630:intron 40.0%
TGACATGAATTTGCAGGGTA+GGG + chr8_3:45555523-45555542 None:intergenic 40.0%
TTGACATGAATTTGCAGGGT+AGG + chr8_3:45555482-45555501 None:intergenic 40.0%
CCTGTTTGACATGAATTTGC+AGG + chr8_3:45555433-45555452 None:intergenic 40.0%
CCTGCAAATTCATGTCAAAC+AGG - chr8_3:45555484-45555503 Msa1290630:intron 40.0%
TTGACATGAATTTGCAGGGT+CGG + chr8_3:45555482-45555501 None:intergenic 40.0%
CCTGTTTGACATGAATTTGC+AGG + chr8_3:45555433-45555452 None:intergenic 40.0%
CCTGCAAATTCATGTCAAAC+AGG - chr8_3:45555484-45555503 Msa1290630:intron 40.0%
TGACATGAATTTGCAGGGTA+GGG + chr8_3:45555523-45555542 None:intergenic 40.0%
TTGACATGAATTTGCAGGGT+AGG + chr8_3:45555482-45555501 None:intergenic 40.0%
CCTGTTTGACATGAATTCAC+AGG + chr8_3:45555667-45555686 None:intergenic 40.0%
CCTGTGAATTCATGTCAAAC+AGG - chr8_3:45555664-45555683 Msa1290630:intron 40.0%
TGACATGAATTTGAAGGGTC+GGG + chr8_3:45555703-45555722 None:intergenic 40.0%
TTGACGTTCATTTGCAGGAT+CGG + chr8_3:45555746-45555765 None:intergenic 40.0%
CCTATTTGACGTTCATTTGC+AGG + chr8_3:45555751-45555770 None:intergenic 40.0%
CCTGCAAATGAACGTCAAAT+AGG - chr8_3:45555748-45555767 Msa1290630:intron 40.0%
AAATTCACGGCAAACAGGAT+TGG - chr8_3:45555792-45555811 Msa1290630:intron 40.0%
TATGAATTATCCACAGGGTC+GGG + chr8_3:45555871-45555890 None:intergenic 40.0%
ATGCTTGATATGTTCGACGA+CGG - chr8_3:45555967-45555986 Msa1290630:CDS 40.0%
GAAACAGATAAGCATACCTC+AGG + chr8_3:45556000-45556019 None:intergenic 40.0%
ATGTGCTAAAGTCAGCATTC+TGG + chr8_3:45556301-45556320 None:intergenic 40.0%
TGACTTTAGCACATACGGAA+TGG - chr8_3:45556307-45556326 Msa1290630:CDS 40.0%
GGATGACTACTTGGATTTCA+TGG - chr8_3:45556340-45556359 Msa1290630:five_prime_UTR 40.0%
TGTGCGTCGGACTTAATATT+TGG - chr8_3:45556474-45556493 Msa1290630:five_prime_UTR 40.0%
! GATTTGGTCATTGGCACATA+TGG - chr8_3:45556526-45556545 Msa1290630:five_prime_UTR 40.0%
! AGCAACCCGAGAAACGATTT+TGG - chr8_3:45553502-45553521 Msa1290630:three_prime_UTR 45.0%
TCAATCTCCTCCTCCGATTT+AGG - chr8_3:45553565-45553584 Msa1290630:three_prime_UTR 45.0%
CAATCTCCTCCTCCGATTTA+GGG - chr8_3:45553566-45553585 Msa1290630:three_prime_UTR 45.0%
TTGGGGGAAAAATTCATCGG+CGG + chr8_3:45553594-45553613 None:intergenic 45.0%
GTCACTGGACTTGATCACTA+GGG - chr8_3:45553700-45553719 Msa1290630:three_prime_UTR 45.0%
GCTACGACAACAAACAACCT+CGG - chr8_3:45553906-45553925 Msa1290630:CDS 45.0%
! GGCTATACCGAAATTGGTTC+CGG - chr8_3:45553977-45553996 Msa1290630:CDS 45.0%
! GCTATACCGAAATTGGTTCC+GGG - chr8_3:45553978-45553997 Msa1290630:CDS 45.0%
! CTATACCGAAATTGGTTCCG+GGG - chr8_3:45553979-45553998 Msa1290630:CDS 45.0%
! TCCCCATCACTTTCCTTTTG+AGG + chr8_3:45554046-45554065 None:intergenic 45.0%
TGTCCGATAGGGAAGAAGTA+TGG - chr8_3:45554270-45554289 Msa1290630:intron 45.0%
GTCGAGGATGAATCGATCTA+CGG - chr8_3:45554299-45554318 Msa1290630:intron 45.0%
! GATCTACGGAAACAGGGTTT+TGG - chr8_3:45554313-45554332 Msa1290630:CDS 45.0%
!!! ACAGGGTTTTGGAAAGCTAC+TGG - chr8_3:45554324-45554343 Msa1290630:CDS 45.0%
GCCATTAGTGACATAGTAGG+TGG + chr8_3:45554760-45554779 None:intergenic 45.0%
TTGACCTCTTCTAAATGCGG+GGG - chr8_3:45554781-45554800 Msa1290630:CDS 45.0%
CCATATTGTGCACCATTCCT+GGG + chr8_3:45555220-45555239 None:intergenic 45.0%
CCAGGAATGGTGCACAATAT+GGG - chr8_3:45555218-45555237 Msa1290630:intron 45.0%
! GACTGGAGTGATGATGAAGT+AGG - chr8_3:45555259-45555278 Msa1290630:intron 45.0%
GACCAGAATCTCCATGCTAT+TGG - chr8_3:45555352-45555371 Msa1290630:intron 45.0%
CAATCCTGATTGACATGGCA+TGG + chr8_3:45555395-45555414 None:intergenic 45.0%
GGCATCAATCCTGATTGACA+TGG + chr8_3:45555400-45555419 None:intergenic 45.0%
!! GAATTTGCTGGATCAGGAGA+AGG + chr8_3:45555421-45555440 None:intergenic 45.0%
TGACATGAATTTGCAGGGTC+GGG + chr8_3:45555481-45555500 None:intergenic 45.0%
TGACATGAATTTGCAGGGTC+GGG + chr8_3:45555481-45555500 None:intergenic 45.0%
GAATTCACAGGGTCTACAGA+AGG + chr8_3:45555655-45555674 None:intergenic 45.0%
TGACGTTCATTTGCAGGATC+GGG + chr8_3:45555745-45555764 None:intergenic 45.0%
CTGTTTGCCGTGAATTTGCA+GGG + chr8_3:45555789-45555808 None:intergenic 45.0%
ACATGAATTTGCAGGGTCAG+CGG + chr8_3:45555827-45555846 None:intergenic 45.0%
! CACCTTCAGCATTGTTTTCC+TGG + chr8_3:45556220-45556239 None:intergenic 45.0%
!! TTTTGATGGTTTGGGAGACC+TGG - chr8_3:45556256-45556275 Msa1290630:CDS 45.0%
TTTGGGAGACCTGGATTTCT+TGG - chr8_3:45556265-45556284 Msa1290630:CDS 45.0%
TTGGGAGACCTGGATTTCTT+GGG - chr8_3:45556266-45556285 Msa1290630:CDS 45.0%
ATCTAGACTCCGAGATGTTC+TGG - chr8_3:45556372-45556391 Msa1290630:five_prime_UTR 45.0%
! ATTTTCTGACGACTGTGCGT+CGG - chr8_3:45556461-45556480 Msa1290630:five_prime_UTR 45.0%
CCAATGACCAAATCACCTTC+TGG + chr8_3:45556520-45556539 None:intergenic 45.0%
!! CCAGAAGGTGATTTGGTCAT+TGG - chr8_3:45556517-45556536 Msa1290630:five_prime_UTR 45.0%
ATCGTGAATGAACACGCTCT+TGG - chr8_3:45556670-45556689 Msa1290630:five_prime_UTR 45.0%
TCATCGGCGGAACCCTAAAT+CGG + chr8_3:45553581-45553600 None:intergenic 50.0%
AGGAACACCAAAGCTTGCCA+AGG + chr8_3:45553665-45553684 None:intergenic 50.0%
CGTCACTGGACTTGATCACT+AGG - chr8_3:45553699-45553718 Msa1290630:three_prime_UTR 50.0%
CGAAACCCCGGAACCAATTT+CGG + chr8_3:45553987-45554006 None:intergenic 50.0%
GTTGGAGAGAATCGAAACCC+CGG + chr8_3:45553999-45554018 None:intergenic 50.0%
GGGTTTCGATTCTCTCCAAC+TGG - chr8_3:45553999-45554018 Msa1290630:CDS 50.0%
TAACTACCTGGGAGATCCCA+AGG + chr8_3:45554119-45554138 None:intergenic 50.0%
TCCAAAACGGGGATTTGGAG+TGG - chr8_3:45554238-45554257 Msa1290630:intron 50.0%
! ACCACTCCAAATCCCCGTTT+TGG + chr8_3:45554242-45554261 None:intergenic 50.0%
! AGAAGTATGGAAGTGGGTCG+AGG - chr8_3:45554283-45554302 Msa1290630:intron 50.0%
!! ATACTGGAAAGGCACCTCGT+GGG - chr8_3:45554409-45554428 Msa1290630:CDS 50.0%
!! TCGTGGGGATCGTACTGATT+GGG - chr8_3:45554425-45554444 Msa1290630:CDS 50.0%
CCCAGGAATGGTGCACAATA+TGG - chr8_3:45555217-45555236 Msa1290630:intron 50.0%
CCCATATTGTGCACCATTCC+TGG + chr8_3:45555221-45555240 None:intergenic 50.0%
GAATTTGCAGGGTAGGGAGA+AGG + chr8_3:45555517-45555536 None:intergenic 50.0%
GAATTTGCAGGGTAGGGAGA+AGG + chr8_3:45555517-45555536 None:intergenic 50.0%
GAATTTGAAGGGTCGGGAGA+CGG + chr8_3:45555697-45555716 None:intergenic 50.0%
TCATTTGCAGGATCGGGAGA+CGG + chr8_3:45555739-45555758 None:intergenic 50.0%
TTGCCGTGAATTTGCAGGGT+CGG + chr8_3:45555785-45555804 None:intergenic 50.0%
CCTGTTTGCCGTGAATTTGC+AGG + chr8_3:45555790-45555809 None:intergenic 50.0%
CCTGCAAATTCACGGCAAAC+AGG - chr8_3:45555787-45555806 Msa1290630:intron 50.0%
CATGAATTTGCAGGGTCAGC+GGG + chr8_3:45555826-45555845 None:intergenic 50.0%
GGCCAGGAAAACAATGCTGA+AGG - chr8_3:45556215-45556234 Msa1290630:CDS 50.0%
CAACAGGTCCCAAGAAATCC+AGG + chr8_3:45556277-45556296 None:intergenic 50.0%
CTGGATTTCTTGGGACCTGT+TGG - chr8_3:45556275-45556294 Msa1290630:CDS 50.0%
AAGTCAGCATTCTGGCCAAC+AGG + chr8_3:45556293-45556312 None:intergenic 50.0%
CACATACGGAATGGCTCCTA+CGG - chr8_3:45556316-45556335 Msa1290630:exon 50.0%
ACATACGGAATGGCTCCTAC+GGG - chr8_3:45556317-45556336 Msa1290630:exon 50.0%
AGCACTCTGCCAGAACATCT+CGG + chr8_3:45556384-45556403 None:intergenic 50.0%
GTGAATGAACACGCTCTTGG+TGG - chr8_3:45556673-45556692 Msa1290630:five_prime_UTR 50.0%
!! CATACTGGAAAGGCACCTCG+TGG - chr8_3:45554408-45554427 Msa1290630:CDS 55.0%
!! TACTGGAAAGGCACCTCGTG+GGG - chr8_3:45554410-45554429 Msa1290630:CDS 55.0%
CAATCAGTACGATCCCCACG+AGG + chr8_3:45554426-45554445 None:intergenic 55.0%
! CTCGTGGGGATCGTACTGAT+TGG - chr8_3:45554424-45554443 Msa1290630:CDS 55.0%
GCAACCCCCGCATTTAGAAG+AGG + chr8_3:45554788-45554807 None:intergenic 55.0%
AAAAGGAAGGTCCTGGTCCC+AGG - chr8_3:45555200-45555219 Msa1290630:intron 55.0%
! AGTGCAGCTGGCTCAGCAAA+TGG + chr8_3:45555289-45555308 None:intergenic 55.0%
AAAGTGGGAGCTAGTGCAGC+TGG + chr8_3:45555301-45555320 None:intergenic 55.0%
GAATTTGCAGGGTCGGGAGA+AGG + chr8_3:45555475-45555494 None:intergenic 55.0%
TTTGCAGGGTAGGGAGAAGG+TGG + chr8_3:45555514-45555533 None:intergenic 55.0%
GAATTTGCAGGGTCGGGAGA+AGG + chr8_3:45555475-45555494 None:intergenic 55.0%
TTTGCAGGGTAGGGAGAAGG+TGG + chr8_3:45555514-45555533 None:intergenic 55.0%
CTCCCGACCCTGCAAATTCA+CGG - chr8_3:45555476-45555495 Msa1290630:intron 55.0%
TGCCGTGAATTTGCAGGGTC+GGG + chr8_3:45555784-45555803 None:intergenic 55.0%
TTATCCACAGGGTCGGGAGA+AGG + chr8_3:45555865-45555884 None:intergenic 55.0%
CATACGGAATGGCTCCTACG+GGG - chr8_3:45556318-45556337 Msa1290630:exon 55.0%
ATACGGAATGGCTCCTACGG+GGG - chr8_3:45556319-45556338 Msa1290630:exon 55.0%
TCCTACGGGGGATGACTACT+TGG - chr8_3:45556331-45556350 Msa1290630:five_prime_UTR 55.0%
TCCAAGTAGTCATCCCCCGT+AGG + chr8_3:45556335-45556354 None:intergenic 55.0%
!! GATGTTCTGGCAGAGTGCTG+CGG - chr8_3:45556385-45556404 Msa1290630:five_prime_UTR 55.0%
! GAGTGCTGCGGAACCTAAGT+TGG - chr8_3:45556397-45556416 Msa1290630:five_prime_UTR 55.0%
TGGCACTATTGCTGCTGTGC+TGG - chr8_3:45556494-45556513 Msa1290630:five_prime_UTR 55.0%
! GTGCTGGCCAGAAGGTGATT+TGG - chr8_3:45556510-45556529 Msa1290630:five_prime_UTR 55.0%
GCGGAACCCTAAATCGGAGG+AGG + chr8_3:45553575-45553594 None:intergenic 60.0%
TCGGCGGAACCCTAAATCGG+AGG + chr8_3:45553578-45553597 None:intergenic 60.0%
TACGCACCTTGGGATCTCCC+AGG - chr8_3:45554110-45554129 Msa1290630:intron 60.0%
GAAGGTCCTGGTCCCAGGAA+TGG - chr8_3:45555205-45555224 Msa1290630:intron 60.0%
TGTGCACCATTCCTGGGACC+AGG + chr8_3:45555214-45555233 None:intergenic 60.0%
TTTGCAGGGTCGGGAGAAGG+CGG + chr8_3:45555472-45555491 None:intergenic 60.0%
CGACGACGGCATATTGCCTG+AGG - chr8_3:45555981-45556000 Msa1290630:CDS 60.0%
! TTGCTGCTGTGCTGGCCAGA+AGG - chr8_3:45556502-45556521 Msa1290630:five_prime_UTR 60.0%
GGTGCCTTCTCCCGACCCTG+TGG - chr8_3:45555858-45555877 Msa1290630:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 45553492 45556810 45553492 ID=Msa1290630;Name=Msa1290630
chr8_3 mRNA 45553492 45556810 45553492 ID=Msa1290630-mRNA-1;Parent=Msa1290630;Name=Msa1290630-mRNA-1;_AED=0.04;_eAED=0.04;_QI=483|1|0.75|1|1|1|4|380|491
chr8_3 exon 45553492 45554081 45553492 ID=Msa1290630-mRNA-1:exon:12578;Parent=Msa1290630-mRNA-1
chr8_3 exon 45554300 45555130 45554300 ID=Msa1290630-mRNA-1:exon:12577;Parent=Msa1290630-mRNA-1
chr8_3 exon 45555799 45556076 45555799 ID=Msa1290630-mRNA-1:exon:12576;Parent=Msa1290630-mRNA-1
chr8_3 exon 45556171 45556810 45556171 ID=Msa1290630-mRNA-1:exon:12575;Parent=Msa1290630-mRNA-1
chr8_3 five_prime_UTR 45556328 45556810 45556328 ID=Msa1290630-mRNA-1:five_prime_utr;Parent=Msa1290630-mRNA-1
chr8_3 CDS 45556171 45556327 45556171 ID=Msa1290630-mRNA-1:cds;Parent=Msa1290630-mRNA-1
chr8_3 CDS 45555799 45556076 45555799 ID=Msa1290630-mRNA-1:cds;Parent=Msa1290630-mRNA-1
chr8_3 CDS 45554300 45555130 45554300 ID=Msa1290630-mRNA-1:cds;Parent=Msa1290630-mRNA-1
chr8_3 CDS 45553872 45554081 45553872 ID=Msa1290630-mRNA-1:cds;Parent=Msa1290630-mRNA-1
chr8_3 three_prime_UTR 45553492 45553871 45553492 ID=Msa1290630-mRNA-1:three_prime_utr;Parent=Msa1290630-mRNA-1
Gene Sequence

>Msa1290630

ATGGCTATACCGAAATTGGTTCCGGGGTTTCGATTCTCTCCAACTGGAGTTGAATTGATCAAATATTTCCTCAAAAGGAAAGTGATGGGGAAAAAGTTTCATAACGATGTCATTGCTGAACTTGACATATACAAATACGCACCTTGGGATCTCCCAGATTTATCTTATCTCCAAAACGGGGATTTGGAGTGGTATTTCTTCTGTCCGATAGGGAAGAAGTATGGAAGTGGGTCGAGGATGAATCGATCTACGGAAACAGGGTTTTGGAAAGCTACTGGTAAGGATAGAGCTGTTCAACAGAATAATCAAATTGTGGGGATGATTAAAACCCTGATATTTCATACTGGAAAGGCACCTCGTGGGGATCGTACTGATTGGGTTATGCATGAGTATAGGCTTGAAGATAAGGATTTGACTGATAGAGGAATTGTTCAGGATTCCTATGTAATCTGTAAGGTATTTCAAAAGGAAGGTCCTGGTCCCAGGAATGGTGCACAATATGGGAAACCATTTAATGAGGAAGACTGGAGTGATGATGAAGTAGGAATACCATTTGCTGAGCCAGCTGCACTAGCTCCCACTTTGCCTGTGACATCTAATAGTTTTGTTCTAAATGACCAGAATCTCCATGCTATTGGATATAATGGTTCAATATCCATGCCATGTCAATCAGGATTGATGCCTTCTCCTGATCCAGCAAATTCATGTCAAACAGGATTACAAACAGGATTACCGCCTTCTCCCGACCCTGCAAATTCATGTCAAACAGGAGTTCCACCTTCTCCCTACCCTGCAAATTCATGTCAAACAGGATTACAAACAGGATTACTGCCTTCTCCCGACCCTGCAAATTCATGTCAAACAGGAGTTCCACCTTCTCCCTACCCTGCAAATTCATGTCAAATAGGATTGACGCCTTCTGTAGACCCTGTGAATTCATGTCAAACAGGATTTATGCCGTCTCCCGACCCTTCAAATTCATGTCAAACAGGGTATATGCCGTCTCCCGATCCTGCAAATGAACGTCAAATAGGATTTATGTCTCCCGACCCTGCAAATTCACGGCAAACAGGATTGGAGCTGTCTCCCGCTGACCCTGCAAATTCATGTAAAACAAGATTGGTGCCTTCTCCCGACCCTGTGGATAATTCATATCATCAAGCTGTTAATAATGATGACCCTGTGGATAATTCATATCATCAAGCTGTTAATAATGATGACATTTTATCAATGCTTGATATGTTCGACGACGGCATATTGCCTGAGGAAAACAATGCTGAAGGTGCACTATCAACTGACTTTTTTGATGGTTTGGGAGACCTGGATTTCTTGGGACCTGTTGGCCAGAATGCTGACTTTAGCACATACGGAATGGCTCCTACGGGGGATGACTACTTGGATTTCATGGAGTTGATTGATCTAGACTCCGAGATGTTCTGGCAGAGTGCTGCGGAACCTAAGTTGGATCCAAAATAA
Protein sequence

>Msa1290630

MAIPKLVPGFRFSPTGVELIKYFLKRKVMGKKFHNDVIAELDIYKYAPWDLPDLSYLQNGDLEWYFFCPIGKKYGSGSRMNRSTETGFWKATGKDRAVQQNNQIVGMIKTLIFHTGKAPRGDRTDWVMHEYRLEDKDLTDRGIVQDSYVICKVFQKEGPGPRNGAQYGKPFNEEDWSDDEVGIPFAEPAALAPTLPVTSNSFVLNDQNLHAIGYNGSISMPCQSGLMPSPDPANSCQTGLQTGLPPSPDPANSCQTGVPPSPYPANSCQTGLQTGLLPSPDPANSCQTGVPPSPYPANSCQIGLTPSVDPVNSCQTGFMPSPDPSNSCQTGYMPSPDPANERQIGFMSPDPANSRQTGLELSPADPANSCKTRLVPSPDPVDNSYHQAVNNDDPVDNSYHQAVNNDDILSMLDMFDDGILPEENNAEGALSTDFFDGLGDLDFLGPVGQNADFSTYGMAPTGDDYLDFMELIDLDSEMFWQSAAEPKLDPK*