Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1291280 | sp|Q0WNR2|BH090_ARATH | 33.185 | 449 | 252 | 11 | 3 | 426 | 10 | 435 | 3.99e-68 | 226 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1291280 | A0A072U2K1 | 89.953 | 428 | 33 | 2 | 1 | 428 | 1 | 418 | 0.0 | 798 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1291280 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1291280 | MtrunA17_Chr8g0365711 | 89.953 | 428 | 33 | 2 | 1 | 428 | 1 | 418 | 0.0 | 798 |
| Msa1291280 | MtrunA17_Chr1g0211081 | 29.480 | 519 | 267 | 16 | 3 | 431 | 9 | 518 | 5.25e-66 | 220 |
| Msa1291280 | MtrunA17_Chr2g0298751 | 33.721 | 172 | 111 | 2 | 244 | 414 | 51 | 220 | 1.06e-25 | 105 |
| Msa1291280 | MtrunA17_Chr3g0131691 | 30.455 | 220 | 127 | 5 | 218 | 425 | 270 | 475 | 3.10e-20 | 93.2 |
| Msa1291280 | MtrunA17_Chr4g0048851 | 33.000 | 200 | 110 | 5 | 224 | 423 | 27 | 202 | 4.27e-20 | 88.6 |
| Msa1291280 | MtrunA17_Chr2g0320291 | 30.769 | 169 | 87 | 3 | 236 | 397 | 124 | 269 | 4.49e-18 | 84.7 |
| Msa1291280 | MtrunA17_Chr4g0028071 | 30.247 | 162 | 99 | 2 | 237 | 397 | 141 | 289 | 4.92e-18 | 85.1 |
| Msa1291280 | MtrunA17_Chr4g0054571 | 29.907 | 214 | 126 | 6 | 225 | 426 | 129 | 330 | 1.46e-16 | 80.5 |
| Msa1291280 | MtrunA17_Chr7g0252041 | 31.183 | 186 | 120 | 4 | 244 | 425 | 285 | 466 | 3.54e-16 | 80.5 |
| Msa1291280 | MtrunA17_Chr4g0049331 | 28.235 | 255 | 158 | 9 | 159 | 408 | 50 | 284 | 1.79e-15 | 77.0 |
| Msa1291280 | MtrunA17_Chr5g0400661 | 26.131 | 199 | 115 | 5 | 231 | 408 | 124 | 311 | 2.59e-13 | 70.9 |
| Msa1291280 | MtrunA17_Chr4g0033391 | 25.281 | 178 | 108 | 4 | 235 | 408 | 137 | 293 | 6.33e-13 | 69.7 |
| Msa1291280 | MtrunA17_Chr2g0307131 | 27.273 | 187 | 114 | 5 | 228 | 408 | 158 | 328 | 8.07e-13 | 69.7 |
| Msa1291280 | MtrunA17_Chr7g0225901 | 24.540 | 163 | 107 | 3 | 247 | 408 | 90 | 237 | 2.28e-12 | 67.0 |
| Msa1291280 | MtrunA17_Chr4g0002801 | 22.419 | 339 | 219 | 11 | 96 | 426 | 29 | 331 | 2.53e-12 | 67.8 |
| Msa1291280 | MtrunA17_Chr2g0280161 | 27.778 | 162 | 104 | 3 | 247 | 408 | 179 | 327 | 2.74e-12 | 67.8 |
| Msa1291280 | MtrunA17_Chr4g0054581 | 25.309 | 162 | 111 | 4 | 247 | 408 | 200 | 351 | 3.75e-12 | 67.8 |
| Msa1291280 | MtrunA17_Chr5g0411341 | 28.395 | 162 | 106 | 4 | 249 | 409 | 497 | 649 | 8.03e-12 | 67.4 |
| Msa1291280 | MtrunA17_Chr5g0400621 | 24.607 | 191 | 122 | 5 | 226 | 408 | 130 | 306 | 2.49e-11 | 64.7 |
| Msa1291280 | MtrunA17_Chr8g0366751 | 28.108 | 185 | 120 | 6 | 250 | 431 | 467 | 641 | 3.10e-11 | 65.5 |
| Msa1291280 | MtrunA17_Chr4g0033291 | 24.510 | 204 | 127 | 4 | 235 | 430 | 145 | 329 | 9.88e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1291280 | AT1G10610.1 | 33.185 | 449 | 252 | 11 | 3 | 426 | 10 | 435 | 4.06e-69 | 226 |
| Msa1291280 | AT1G10610.2 | 31.678 | 423 | 241 | 11 | 29 | 426 | 6 | 405 | 2.70e-54 | 187 |
| Msa1291280 | AT1G10610.3 | 29.167 | 360 | 213 | 9 | 87 | 426 | 1 | 338 | 2.06e-35 | 134 |
| Msa1291280 | AT2G16910.1 | 42.763 | 152 | 73 | 5 | 3 | 147 | 8 | 152 | 8.82e-35 | 136 |
| Msa1291280 | AT2G16910.1 | 37.436 | 195 | 113 | 3 | 243 | 428 | 312 | 506 | 2.35e-30 | 124 |
| Msa1291280 | AT5G57150.1 | 34.731 | 167 | 104 | 2 | 244 | 410 | 53 | 214 | 3.38e-28 | 112 |
| Msa1291280 | AT5G57150.2 | 33.929 | 168 | 106 | 2 | 244 | 411 | 54 | 216 | 3.81e-28 | 111 |
| Msa1291280 | AT5G57150.5 | 34.337 | 166 | 104 | 2 | 244 | 409 | 53 | 213 | 3.91e-28 | 111 |
| Msa1291280 | AT5G57150.3 | 34.337 | 166 | 104 | 2 | 244 | 409 | 54 | 214 | 4.40e-28 | 111 |
| Msa1291280 | AT5G57150.4 | 34.337 | 166 | 104 | 2 | 244 | 409 | 54 | 214 | 5.26e-28 | 112 |
| Msa1291280 | AT4G29930.6 | 28.743 | 167 | 100 | 2 | 244 | 410 | 53 | 200 | 2.49e-20 | 90.1 |
| Msa1291280 | AT4G29930.5 | 27.976 | 168 | 99 | 3 | 244 | 411 | 53 | 198 | 7.88e-20 | 88.6 |
| Msa1291280 | AT4G29930.2 | 28.144 | 167 | 98 | 3 | 244 | 410 | 53 | 197 | 8.23e-20 | 88.6 |
| Msa1291280 | AT4G29930.3 | 29.508 | 183 | 106 | 5 | 244 | 411 | 53 | 227 | 9.44e-20 | 89.0 |
| Msa1291280 | AT4G29930.7 | 29.508 | 183 | 106 | 5 | 244 | 411 | 53 | 227 | 9.44e-20 | 89.0 |
| Msa1291280 | AT4G29930.1 | 29.670 | 182 | 105 | 5 | 244 | 410 | 53 | 226 | 1.07e-19 | 88.6 |
| Msa1291280 | AT1G12860.1 | 32.609 | 184 | 114 | 4 | 244 | 425 | 266 | 441 | 2.39e-18 | 87.4 |
| Msa1291280 | AT2G28160.1 | 30.189 | 159 | 98 | 3 | 240 | 397 | 126 | 272 | 5.12e-18 | 85.1 |
| Msa1291280 | AT2G28160.2 | 30.189 | 159 | 98 | 3 | 240 | 397 | 126 | 272 | 5.20e-18 | 85.1 |
| Msa1291280 | AT1G12860.2 | 33.735 | 166 | 102 | 3 | 244 | 409 | 266 | 423 | 5.14e-17 | 83.2 |
| Msa1291280 | AT3G26744.1 | 28.351 | 194 | 113 | 3 | 244 | 425 | 306 | 485 | 9.54e-16 | 79.7 |
| Msa1291280 | AT3G26744.4 | 28.351 | 194 | 113 | 3 | 244 | 425 | 306 | 485 | 9.54e-16 | 79.7 |
| Msa1291280 | AT3G26744.2 | 28.351 | 194 | 113 | 3 | 244 | 425 | 306 | 485 | 9.54e-16 | 79.7 |
| Msa1291280 | AT4G29930.4 | 46.479 | 71 | 34 | 1 | 244 | 314 | 53 | 119 | 3.22e-15 | 74.3 |
| Msa1291280 | AT3G26744.6 | 29.379 | 177 | 99 | 3 | 244 | 409 | 306 | 467 | 1.87e-14 | 75.9 |
| Msa1291280 | AT5G46760.1 | 26.816 | 179 | 121 | 2 | 249 | 427 | 419 | 587 | 1.40e-13 | 73.2 |
| Msa1291280 | AT4G21330.1 | 26.804 | 194 | 124 | 4 | 242 | 432 | 29 | 207 | 1.57e-13 | 69.7 |
| Msa1291280 | AT4G17880.1 | 30.909 | 165 | 87 | 6 | 249 | 409 | 420 | 561 | 5.18e-13 | 71.6 |
| Msa1291280 | AT5G41315.1 | 25.000 | 184 | 122 | 4 | 230 | 400 | 425 | 605 | 1.22e-12 | 70.5 |
| Msa1291280 | AT5G41315.2 | 25.000 | 184 | 122 | 4 | 230 | 400 | 433 | 613 | 1.28e-12 | 70.5 |
| Msa1291280 | AT5G41315.3 | 25.000 | 184 | 122 | 4 | 230 | 400 | 430 | 610 | 1.33e-12 | 70.5 |
| Msa1291280 | AT4G37850.2 | 29.310 | 174 | 102 | 6 | 246 | 415 | 153 | 309 | 3.06e-12 | 67.8 |
| Msa1291280 | AT4G37850.1 | 29.310 | 174 | 102 | 6 | 246 | 415 | 153 | 309 | 3.06e-12 | 67.8 |
| Msa1291280 | AT1G32640.1 | 31.902 | 163 | 89 | 5 | 249 | 409 | 456 | 598 | 4.81e-12 | 68.6 |
| Msa1291280 | AT1G63650.3 | 25.824 | 182 | 115 | 5 | 230 | 400 | 392 | 564 | 6.69e-12 | 68.2 |
| Msa1291280 | AT1G63650.1 | 25.824 | 182 | 115 | 5 | 230 | 400 | 392 | 564 | 6.69e-12 | 68.2 |
| Msa1291280 | AT1G63650.2 | 25.824 | 182 | 115 | 5 | 230 | 400 | 392 | 564 | 6.69e-12 | 68.2 |
Find 82 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATATACCTTGGTTATATT+AGG | 0.201515 | 8_3:+46590184 | None:intergenic |
| TATGTTGTTGTTTGGAAATA+TGG | 0.204753 | 8_3:-46591444 | Msa1291280:CDS |
| TCAACAAGACCGCCAATAAT+AGG | 0.227144 | 8_3:+46590725 | None:intergenic |
| TTCACGGTATTTATATCTTC+TGG | 0.230774 | 8_3:+46590589 | None:intergenic |
| TTACAATGTCTCTTTATTCT+AGG | 0.232812 | 8_3:-46591018 | Msa1291280:intron |
| ATCGGTGAGAGGTAGGTTTC+TGG | 0.265091 | 8_3:+46589773 | None:intergenic |
| AAAAGTTCTGAACATTCTTA+TGG | 0.297211 | 8_3:-46589436 | Msa1291280:CDS |
| GATATACCTTGGTTATATTA+GGG | 0.312920 | 8_3:+46590185 | None:intergenic |
| GAATAAAGAGACATTGTAAA+AGG | 0.329076 | 8_3:+46591022 | None:intergenic |
| CTTGGGATTATGTTGTTGTT+TGG | 0.348246 | 8_3:-46591452 | Msa1291280:CDS |
| TCGAGTGTCGATTGTGGAAA+TGG | 0.359972 | 8_3:-46590334 | Msa1291280:CDS |
| ATTGAAGCAATAGATTCATT+TGG | 0.361378 | 8_3:-46589498 | Msa1291280:CDS |
| TAATTTGACACTCAACAAAT+AGG | 0.361942 | 8_3:+46587977 | None:intergenic |
| GCAAACATGACCACATTTGA+TGG | 0.371124 | 8_3:-46589459 | Msa1291280:CDS |
| TCACGGTATTTATATCTTCT+GGG | 0.373046 | 8_3:+46590590 | None:intergenic |
| CAACAAGACCGCCAATAATA+GGG | 0.398653 | 8_3:+46590726 | None:intergenic |
| CATGATACACTTTCTCTTGA+GGG | 0.400561 | 8_3:+46590281 | None:intergenic |
| TGTAGGTTTATTGAGTGGTT+AGG | 0.409602 | 8_3:-46591187 | Msa1291280:intron |
| ACCTCATGGATAAGCCATCT+TGG | 0.422456 | 8_3:+46590868 | None:intergenic |
| ATCATTTGGCTTCCATTTGT+AGG | 0.425186 | 8_3:-46591102 | Msa1291280:CDS |
| GGATGCGATTGAATATATAA+TGG | 0.425745 | 8_3:-46589913 | Msa1291280:CDS |
| GGCAAGAGCCTCGCAAGTCT+TGG | 0.433530 | 8_3:+46591051 | None:intergenic |
| ATCTTATCACAGAGAGGAAT+AGG | 0.438830 | 8_3:-46590252 | Msa1291280:CDS |
| AATTTGTGAAGAATATCATT+TGG | 0.442609 | 8_3:-46591116 | Msa1291280:CDS |
| CTTTGTTGAGAGGAAAGCTT+GGG | 0.443033 | 8_3:-46591469 | Msa1291280:CDS |
| AATGATAAGTGCTCAGTTGA+AGG | 0.446352 | 8_3:+46590454 | None:intergenic |
| AGGCCTCCAGTAGGAGAATT+CGG | 0.447356 | 8_3:-46588028 | Msa1291280:CDS |
| TGGTTAGGTTGTTGCTGTTG+TGG | 0.457561 | 8_3:-46591172 | Msa1291280:CDS |
| TCTGAACATTCTTATGGTTG+AGG | 0.459060 | 8_3:-46589430 | Msa1291280:intron |
| TCATTTGGCTTCCATTTGTA+GGG | 0.464580 | 8_3:-46591101 | Msa1291280:CDS |
| TATAAAGCAAGAAGCCATAT+CGG | 0.481509 | 8_3:-46590539 | Msa1291280:CDS |
| ATGTGCTGATATGAACTTCA+CGG | 0.499222 | 8_3:+46590573 | None:intergenic |
| CCTTTGTTGAGAGGAAAGCT+TGG | 0.499952 | 8_3:-46591470 | Msa1291280:CDS |
| AGACATTGTAAAAGGAAGCT+TGG | 0.509673 | 8_3:+46591030 | None:intergenic |
| TGAGAAGGTGAAGTTGAAAG+AGG | 0.513233 | 8_3:-46591140 | Msa1291280:CDS |
| AGAATTTCAAGAAGAGGTCA+AGG | 0.513955 | 8_3:-46589871 | Msa1291280:CDS |
| TTTGTAGTGTGCTCTTCCCA+CGG | 0.515454 | 8_3:+46589832 | None:intergenic |
| CAAGAGGAATCAAGCATCCA+TGG | 0.518928 | 8_3:+46590422 | None:intergenic |
| ACAAATAGGTACAATCAAGT+TGG | 0.519974 | 8_3:+46587991 | None:intergenic |
| TTTGCCCCAGGCAACTGCGC+AGG | 0.520563 | 8_3:-46588697 | Msa1291280:intron |
| TTCTTAGACCCTTTGTTGAG+AGG | 0.521603 | 8_3:-46591479 | Msa1291280:CDS |
| TTAGGTTGTTGCTGTTGTGG+TGG | 0.522064 | 8_3:-46591169 | Msa1291280:CDS |
| ATTTCACCGAATTCTCCTAC+TGG | 0.522853 | 8_3:+46588022 | None:intergenic |
| CTCCATCCGTGTCTTTCTAG+TGG | 0.522923 | 8_3:+46589728 | None:intergenic |
| TTATCATTTGATTCAAACCA+TGG | 0.523144 | 8_3:-46590439 | Msa1291280:CDS |
| CAAGCTTTCCTCTCAACAAA+GGG | 0.525491 | 8_3:+46591471 | None:intergenic |
| GGTCAAGGCTTTAGAAGTTG+AGG | 0.531075 | 8_3:-46589856 | Msa1291280:CDS |
| GCATGATACACTTTCTCTTG+AGG | 0.533440 | 8_3:+46590280 | None:intergenic |
| AGAGAAAGAATTTCAAGAAG+AGG | 0.551008 | 8_3:-46589877 | Msa1291280:CDS |
| AAATAAAGAAAATATTGTAA+AGG | 0.551219 | 8_3:-46590305 | Msa1291280:CDS |
| CCAAGCTTTCCTCTCAACAA+AGG | 0.551769 | 8_3:+46591470 | None:intergenic |
| TCTTGTGTAGGTTTATTGAG+TGG | 0.557166 | 8_3:-46591192 | Msa1291280:intron |
| GTGATATTGCTACCTCTGCA+TGG | 0.560850 | 8_3:+46590896 | None:intergenic |
| GATCAAGATCGGTGAGAGGT+AGG | 0.562213 | 8_3:+46589766 | None:intergenic |
| GCTAAAATTGAAGTTCATGT+TGG | 0.562915 | 8_3:+46590504 | None:intergenic |
| AGACGAACTTTGATCAAGAT+CGG | 0.586612 | 8_3:+46589755 | None:intergenic |
| CTTTAGAAGTTGAGGACCGT+GGG | 0.594996 | 8_3:-46589848 | Msa1291280:CDS |
| CAATATCACAGCAACCAAGA+TGG | 0.602156 | 8_3:-46590882 | Msa1291280:CDS |
| GGTTGATTCAAATATTCAAG+AGG | 0.603504 | 8_3:+46590406 | None:intergenic |
| TGTAGTTCGAGTGTCGATTG+TGG | 0.603626 | 8_3:-46590340 | Msa1291280:CDS |
| AGTATTTGATGCAGAAAACA+AGG | 0.604081 | 8_3:-46588650 | Msa1291280:intron |
| GTAGAAGTGAATCATATCGC+CGG | 0.619401 | 8_3:-46589579 | Msa1291280:CDS |
| GCTTTAGAAGTTGAGGACCG+TGG | 0.622520 | 8_3:-46589849 | Msa1291280:CDS |
| AATATGGAAATGATCCAACT+AGG | 0.624297 | 8_3:-46591428 | Msa1291280:intron |
| AATATATAATGGAATTGCAG+AGG | 0.626528 | 8_3:-46589902 | Msa1291280:CDS |
| AGGAGGAACAGAATAAAACA+AGG | 0.627576 | 8_3:-46590232 | Msa1291280:CDS |
| AAAGACAAAGAACTTGCAGA+AGG | 0.635182 | 8_3:-46589798 | Msa1291280:CDS |
| CGCAGTTCAAGGCCTCCAGT+AGG | 0.639953 | 8_3:-46588037 | Msa1291280:intron |
| TCACCGAATTCTCCTACTGG+AGG | 0.640356 | 8_3:+46588025 | None:intergenic |
| GGACAGAGTAGCAATTCTTG+AGG | 0.640821 | 8_3:-46589934 | Msa1291280:CDS |
| GATCTACAGTATCCATGCAG+AGG | 0.649229 | 8_3:-46590908 | Msa1291280:intron |
| TTATCACAGAGAGGAATAGG+AGG | 0.649501 | 8_3:-46590249 | Msa1291280:CDS |
| TTCCACTAGAAAGACACGGA+TGG | 0.652546 | 8_3:-46589730 | Msa1291280:CDS |
| ACCAAGATGGCTTATCCATG+AGG | 0.658504 | 8_3:-46590869 | Msa1291280:intron |
| TCTAGTCCCTAATATAACCA+AGG | 0.659673 | 8_3:-46590191 | Msa1291280:intron |
| CTGATTCCACTAGAAAGACA+CGG | 0.659773 | 8_3:-46589734 | Msa1291280:CDS |
| CACTAGAAAGACACGGATGG+AGG | 0.661720 | 8_3:-46589727 | Msa1291280:intron |
| AGTTAAAACCAAGACTTGCG+AGG | 0.679812 | 8_3:-46591059 | Msa1291280:CDS |
| CTTTGATCAAGATCGGTGAG+AGG | 0.680787 | 8_3:+46589762 | None:intergenic |
| TTGTGGTGGAAACATTGAGA+AGG | 0.683212 | 8_3:-46591155 | Msa1291280:CDS |
| GGAGGAACAGAATAAAACAA+GGG | 0.689769 | 8_3:-46590231 | Msa1291280:CDS |
| TTGTGCTGTGAGCAGAAGCA+AGG | 0.689984 | 8_3:-46589537 | Msa1291280:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTCAAATTTTAATACTTAT+TGG | - | chr8_3:46588805-46588824 | Msa1291280:intron | 10.0% |
| !! | AAATAAAGAAAATATTGTAA+AGG | - | chr8_3:46589178-46589197 | Msa1291280:intron | 10.0% |
| !! | AAATATTAAGAGATTATATT+AGG | + | chr8_3:46589872-46589891 | None:intergenic | 10.0% |
| !! | AAACTAAATATAACAAAAAT+TGG | - | chr8_3:46591329-46591348 | Msa1291280:intron | 10.0% |
| !! | GATCAAAAAAATTGAAAAAT+TGG | + | chr8_3:46588262-46588281 | None:intergenic | 15.0% |
| !! | TTCTATATTTAATCATTGAA+AGG | - | chr8_3:46588531-46588550 | Msa1291280:intron | 15.0% |
| !! | AATTAAGAACTTATATCATA+AGG | - | chr8_3:46588666-46588685 | Msa1291280:CDS | 15.0% |
| !! | ATTAAGAACTTATATCATAA+GGG | - | chr8_3:46588667-46588686 | Msa1291280:CDS | 15.0% |
| !!! | AATTTTATTGTTTCTTTTCT+TGG | - | chr8_3:46589843-46589862 | Msa1291280:CDS | 15.0% |
| !! | TAAATATAACAAAAATTGGA+GGG | - | chr8_3:46591333-46591352 | Msa1291280:intron | 15.0% |
| !! | ATGCAAATGAATAACAAAAT+GGG | + | chr8_3:46588090-46588109 | None:intergenic | 20.0% |
| !! | AATTTGTGAAGAATATCATT+TGG | - | chr8_3:46588367-46588386 | Msa1291280:intron | 20.0% |
| !!! | TTTAACTTGATGATGAAAAA+GGG | + | chr8_3:46588411-46588430 | None:intergenic | 20.0% |
| !!! | TTTTAACTTGATGATGAAAA+AGG | + | chr8_3:46588412-46588431 | None:intergenic | 20.0% |
| !! | ACAAAAATTAATTTACCTCA+TGG | + | chr8_3:46588632-46588651 | None:intergenic | 20.0% |
| !! | TAAACAATTTAGATATACCT+TGG | + | chr8_3:46589312-46589331 | None:intergenic | 20.0% |
| !!! | TTGTTTTTTTTACTATGTCA+TGG | - | chr8_3:46589808-46589827 | Msa1291280:CDS | 20.0% |
| !! | TCTAATTTAAATACTCAATC+TGG | + | chr8_3:46590179-46590198 | None:intergenic | 20.0% |
| !! | ATTGAGTATTTAAATTAGAC+AGG | - | chr8_3:46590180-46590199 | Msa1291280:intron | 20.0% |
| !! | AAATTCAATTAAGGTAATGA+GGG | + | chr8_3:46590437-46590456 | None:intergenic | 20.0% |
| !! | AAAATTCAATTAAGGTAATG+AGG | + | chr8_3:46590438-46590457 | None:intergenic | 20.0% |
| !!! | TAGTTTTTCAAAATTGTCTA+CGG | + | chr8_3:46590627-46590646 | None:intergenic | 20.0% |
| !!! | AAGTAGTTTTTATAGTGATA+TGG | + | chr8_3:46591146-46591165 | None:intergenic | 20.0% |
| !! | GAAATTCTTAAATGTACATT+AGG | + | chr8_3:46591191-46591210 | None:intergenic | 20.0% |
| !! | ATCTCTATTACTAATGATTA+AGG | - | chr8_3:46591240-46591259 | Msa1291280:intron | 20.0% |
| !!! | TGTAAAAAGATAAGTTTTTG+AGG | + | chr8_3:46591271-46591290 | None:intergenic | 20.0% |
| !! | CTAAATATAACAAAAATTGG+AGG | - | chr8_3:46591332-46591351 | Msa1291280:intron | 20.0% |
| !!! | TATGTTGTTGTTTGGAAATA+TGG | - | chr8_3:46588039-46588058 | Msa1291280:intron | 25.0% |
| ! | CATGCAAATGAATAACAAAA+TGG | + | chr8_3:46588091-46588110 | None:intergenic | 25.0% |
| ! | GAATAAAGAGACATTGTAAA+AGG | + | chr8_3:46588464-46588483 | None:intergenic | 25.0% |
| ! | TTACAATGTCTCTTTATTCT+AGG | - | chr8_3:46588465-46588484 | Msa1291280:intron | 25.0% |
| ! | ATCATTGAAAGGAAATTCTA+AGG | - | chr8_3:46588542-46588561 | Msa1291280:intron | 25.0% |
| !! | GAGGTAAATTAATTTTTGTG+TGG | - | chr8_3:46588633-46588652 | Msa1291280:intron | 25.0% |
| !!! | TTAACTGTTAATGTTTTGAC+AGG | - | chr8_3:46588709-46588728 | Msa1291280:intron | 25.0% |
| !!! | CAAGTTTTAATCCCTATTAT+TGG | - | chr8_3:46588746-46588765 | Msa1291280:intron | 25.0% |
| !!! | TACAATCATTTTAGAACAGA+AGG | + | chr8_3:46588836-46588855 | None:intergenic | 25.0% |
| ! | TTATCATTTGATTCAAACCA+TGG | - | chr8_3:46589044-46589063 | Msa1291280:intron | 25.0% |
| ! | GATATACCTTGGTTATATTA+GGG | + | chr8_3:46589301-46589320 | None:intergenic | 25.0% |
| ! | AGATATACCTTGGTTATATT+AGG | + | chr8_3:46589302-46589321 | None:intergenic | 25.0% |
| !! | TATAACTTTTACCAAAATCG+TGG | + | chr8_3:46589428-46589447 | None:intergenic | 25.0% |
| ! | GTAAAGCTTCAACAAAATTA+CGG | - | chr8_3:46589450-46589469 | Msa1291280:CDS | 25.0% |
| !! | AATATATAATGGAATTGCAG+AGG | - | chr8_3:46589581-46589600 | Msa1291280:CDS | 25.0% |
| !! | CTTAATCATGAAATCTTTTC+CGG | + | chr8_3:46589926-46589945 | None:intergenic | 25.0% |
| ! | ATTGAAGCAATAGATTCATT+TGG | - | chr8_3:46589985-46590004 | Msa1291280:intron | 25.0% |
| !!! | AAAAGTTCTGAACATTCTTA+TGG | - | chr8_3:46590047-46590066 | Msa1291280:intron | 25.0% |
| !!! | TAAAAAGTATGATTTGGTGT+GGG | + | chr8_3:46590152-46590171 | None:intergenic | 25.0% |
| !! | GGAATGTAAAAAGTATGATT+TGG | + | chr8_3:46590158-46590177 | None:intergenic | 25.0% |
| ! | GGTAAAAATTATCTGTTGTA+AGG | + | chr8_3:46590416-46590435 | None:intergenic | 25.0% |
| !! | TGTATTCGATTTGAAGTATT+CGG | + | chr8_3:46590531-46590550 | None:intergenic | 25.0% |
| ! | AATGAGATTATTGTAGATAG+TGG | + | chr8_3:46590562-46590581 | None:intergenic | 25.0% |
| ! | AAAACTAGAGATTTCATTCA+TGG | - | chr8_3:46590640-46590659 | Msa1291280:intron | 25.0% |
| ! | TATCTCCATATTTAAAGACT+AGG | - | chr8_3:46590674-46590693 | Msa1291280:intron | 25.0% |
| !! | ATCAACCTAGTCTTTAAATA+TGG | + | chr8_3:46590682-46590701 | None:intergenic | 25.0% |
| !! | AAATACTCTCTGATTTTCTT+CGG | + | chr8_3:46590820-46590839 | None:intergenic | 25.0% |
| ! | AATTATGAAGTTGAGGAAAA+TGG | - | chr8_3:46590872-46590891 | Msa1291280:CDS | 25.0% |
| ! | GTTATTATCTGTAAACTAGT+TGG | - | chr8_3:46590902-46590921 | Msa1291280:CDS | 25.0% |
| ! | TTTGTAGCATAATCATTGTA+AGG | + | chr8_3:46591020-46591039 | None:intergenic | 25.0% |
| !! | TAGTTTTTATAGTGATATGG+TGG | + | chr8_3:46591143-46591162 | None:intergenic | 25.0% |
| !!! | GTTTCGTTTTTTAATACTAG+GGG | + | chr8_3:46591306-46591325 | None:intergenic | 25.0% |
| !!! | CGTTTCGTTTTTTAATACTA+GGG | + | chr8_3:46591307-46591326 | None:intergenic | 25.0% |
| !!! | TCGTTTCGTTTTTTAATACT+AGG | + | chr8_3:46591308-46591327 | None:intergenic | 25.0% |
| AATATGGAAATGATCCAACT+AGG | - | chr8_3:46588055-46588074 | Msa1291280:intron | 30.0% | |
| TATGAAACATAGATACTCCT+CGG | - | chr8_3:46588119-46588138 | Msa1291280:intron | 30.0% | |
| TAACTTGAGAAAATGACATC+AGG | + | chr8_3:46588156-46588175 | None:intergenic | 30.0% | |
| ! | ATCCAATTTTTCTCTTGTGT+AGG | - | chr8_3:46588279-46588298 | Msa1291280:intron | 30.0% |
| AACCTACACAAGAGAAAAAT+TGG | + | chr8_3:46588284-46588303 | None:intergenic | 30.0% | |
| !! | GTTTTAATCCCTATTATTGG+CGG | - | chr8_3:46588749-46588768 | Msa1291280:intron | 30.0% |
| TCACGGTATTTATATCTTCT+GGG | + | chr8_3:46588896-46588915 | None:intergenic | 30.0% | |
| TTCACGGTATTTATATCTTC+TGG | + | chr8_3:46588897-46588916 | None:intergenic | 30.0% | |
| TATAAAGCAAGAAGCCATAT+CGG | - | chr8_3:46588944-46588963 | Msa1291280:intron | 30.0% | |
| GCTAAAATTGAAGTTCATGT+TGG | + | chr8_3:46588982-46589001 | None:intergenic | 30.0% | |
| !! | CATGAACTTCAATTTTAGCA+TGG | - | chr8_3:46588983-46589002 | Msa1291280:intron | 30.0% |
| !! | AACTTCAATTTTAGCATGGA+AGG | - | chr8_3:46588987-46589006 | Msa1291280:intron | 30.0% |
| ! | GGTTGATTCAAATATTCAAG+AGG | + | chr8_3:46589080-46589099 | None:intergenic | 30.0% |
| CTAAAAATCTTATCACAGAG+AGG | - | chr8_3:46589225-46589244 | Msa1291280:intron | 30.0% | |
| !! | TATTGATTTGAACATGCACT+AGG | - | chr8_3:46589499-46589518 | Msa1291280:CDS | 30.0% |
| ! | GTATCTAATCCTCTCAATTT+TGG | - | chr8_3:46589521-46589540 | Msa1291280:CDS | 30.0% |
| GGATGCGATTGAATATATAA+TGG | - | chr8_3:46589570-46589589 | Msa1291280:CDS | 30.0% | |
| AGAGAAAGAATTTCAAGAAG+AGG | - | chr8_3:46589606-46589625 | Msa1291280:intron | 30.0% | |
| GATAATAGCAAACTAACTCA+TGG | + | chr8_3:46590116-46590135 | None:intergenic | 30.0% | |
| !! | GAGTTAGTTTGCTATTATCT+TGG | - | chr8_3:46590117-46590136 | Msa1291280:intron | 30.0% |
| !! | GTAAAAAGTATGATTTGGTG+TGG | + | chr8_3:46590153-46590172 | None:intergenic | 30.0% |
| AACATAGCCTAATCATTCTT+TGG | + | chr8_3:46590227-46590246 | None:intergenic | 30.0% | |
| AAGAATGATTAGGCTATGTT+TGG | - | chr8_3:46590227-46590246 | Msa1291280:CDS | 30.0% | |
| ! | TGATCAAAATAGAGCTGTTT+TGG | - | chr8_3:46590301-46590320 | Msa1291280:CDS | 30.0% |
| AGCTTAAATACTACTTGAAG+TGG | + | chr8_3:46590389-46590408 | None:intergenic | 30.0% | |
| GATAGAGAATCAATGAAACA+GGG | + | chr8_3:46590716-46590735 | None:intergenic | 30.0% | |
| AATCTTATGAACTTACGGAT+GGG | + | chr8_3:46590738-46590757 | None:intergenic | 30.0% | |
| TAACCTCGTTACAATAGAAA+GGG | + | chr8_3:46590763-46590782 | None:intergenic | 30.0% | |
| TTAACCTCGTTACAATAGAA+AGG | + | chr8_3:46590764-46590783 | None:intergenic | 30.0% | |
| ! | AATACTCTCTGATTTTCTTC+GGG | + | chr8_3:46590819-46590838 | None:intergenic | 30.0% |
| AGTATTTGATGCAGAAAACA+AGG | - | chr8_3:46590833-46590852 | Msa1291280:intron | 30.0% | |
| ACAAAGCAATTATGAAGTTG+AGG | - | chr8_3:46590865-46590884 | Msa1291280:intron | 30.0% | |
| AAACTAGTTGGCTGAAAAAT+TGG | - | chr8_3:46590914-46590933 | Msa1291280:intron | 30.0% | |
| !! | TGTCTTTTTGCAATTTTAGC+AGG | + | chr8_3:46591079-46591098 | None:intergenic | 30.0% |
| CACCAAATTCAAAAATGTTG+CGG | - | chr8_3:46591097-46591116 | Msa1291280:CDS | 30.0% | |
| ! | TTCCGCAACATTTTTGAATT+TGG | + | chr8_3:46591102-46591121 | None:intergenic | 30.0% |
| ! | CGGAATTTAGAATCGAAAAT+AGG | - | chr8_3:46591117-46591136 | Msa1291280:CDS | 30.0% |
| AAATCTTCTCAATCCAACAA+AGG | - | chr8_3:46591211-46591230 | Msa1291280:intron | 30.0% | |
| ! | TTTTTAATACTAGGGGATGA+TGG | + | chr8_3:46591299-46591318 | None:intergenic | 30.0% |
| ! | ATCATATTACAGCATGCTTT+TGG | + | chr8_3:46591424-46591443 | None:intergenic | 30.0% |
| ACAAATAGGTACAATCAAGT+TGG | + | chr8_3:46591495-46591514 | None:intergenic | 30.0% | |
| ! | CTTGGGATTATGTTGTTGTT+TGG | - | chr8_3:46588031-46588050 | Msa1291280:CDS | 35.0% |
| GTGAAGTATAGACTCAAACA+CGG | + | chr8_3:46588222-46588241 | None:intergenic | 35.0% | |
| TGTTTGAGTCTATACTTCAC+AGG | - | chr8_3:46588222-46588241 | Msa1291280:intron | 35.0% | |
| TCTTGTGTAGGTTTATTGAG+TGG | - | chr8_3:46588291-46588310 | Msa1291280:intron | 35.0% | |
| TGTAGGTTTATTGAGTGGTT+AGG | - | chr8_3:46588296-46588315 | Msa1291280:intron | 35.0% | |
| ! | ATCATTTGGCTTCCATTTGT+AGG | - | chr8_3:46588381-46588400 | Msa1291280:intron | 35.0% |
| ! | TCATTTGGCTTCCATTTGTA+GGG | - | chr8_3:46588382-46588401 | Msa1291280:intron | 35.0% |
| !! | AAAAAGGGTATCCCTACAAA+TGG | + | chr8_3:46588396-46588415 | None:intergenic | 35.0% |
| AGACATTGTAAAAGGAAGCT+TGG | + | chr8_3:46588456-46588475 | None:intergenic | 35.0% | |
| ! | ATGTGCTGATATGAACTTCA+CGG | + | chr8_3:46588913-46588932 | None:intergenic | 35.0% |
| AATGATAAGTGCTCAGTTGA+AGG | + | chr8_3:46589032-46589051 | None:intergenic | 35.0% | |
| ! | CTGAAATTTTATTGCGTCTG+TGG | + | chr8_3:46589112-46589131 | None:intergenic | 35.0% |
| CATGATACACTTTCTCTTGA+GGG | + | chr8_3:46589205-46589224 | None:intergenic | 35.0% | |
| ATCTTATCACAGAGAGGAAT+AGG | - | chr8_3:46589231-46589250 | Msa1291280:intron | 35.0% | |
| AGGAGGAACAGAATAAAACA+AGG | - | chr8_3:46589251-46589270 | Msa1291280:intron | 35.0% | |
| GGAGGAACAGAATAAAACAA+GGG | - | chr8_3:46589252-46589271 | Msa1291280:intron | 35.0% | |
| ! | AACAAGGGCTTTTTACACTA+AGG | - | chr8_3:46589267-46589286 | Msa1291280:intron | 35.0% |
| TCTAGTCCCTAATATAACCA+AGG | - | chr8_3:46589292-46589311 | Msa1291280:intron | 35.0% | |
| ! | AACTTTTACCAAAATCGTGG+TGG | + | chr8_3:46589425-46589444 | None:intergenic | 35.0% |
| AGAATTTCAAGAAGAGGTCA+AGG | - | chr8_3:46589612-46589631 | Msa1291280:intron | 35.0% | |
| AAAGACAAAGAACTTGCAGA+AGG | - | chr8_3:46589685-46589704 | Msa1291280:intron | 35.0% | |
| AGACGAACTTTGATCAAGAT+CGG | + | chr8_3:46589731-46589750 | None:intergenic | 35.0% | |
| ! | CAGAACTTTTCCATCAAATG+TGG | + | chr8_3:46590037-46590056 | None:intergenic | 35.0% |
| TCTGAACATTCTTATGGTTG+AGG | - | chr8_3:46590053-46590072 | Msa1291280:intron | 35.0% | |
| ACATTCTTATGGTTGAGGTA+AGG | - | chr8_3:46590058-46590077 | Msa1291280:intron | 35.0% | |
| CATTCTTATGGTTGAGGTAA+GGG | - | chr8_3:46590059-46590078 | Msa1291280:intron | 35.0% | |
| ! | AACTAACTCATGGATTTTCG+TGG | + | chr8_3:46590106-46590125 | None:intergenic | 35.0% |
| CTTCCTTCCAAAGAATGATT+AGG | - | chr8_3:46590217-46590236 | Msa1291280:CDS | 35.0% | |
| TAGCCTAATCATTCTTTGGA+AGG | + | chr8_3:46590223-46590242 | None:intergenic | 35.0% | |
| ! | AGCTATTTGTTACAAGCTAG+CGG | + | chr8_3:46590262-46590281 | None:intergenic | 35.0% |
| GGATAGAGAATCAATGAAAC+AGG | + | chr8_3:46590717-46590736 | None:intergenic | 35.0% | |
| GAATCTTATGAACTTACGGA+TGG | + | chr8_3:46590739-46590758 | None:intergenic | 35.0% | |
| GGGAGAATCTTATGAACTTA+CGG | + | chr8_3:46590743-46590762 | None:intergenic | 35.0% | |
| TATGAAGTTGAGGAAAATGG+TGG | - | chr8_3:46590875-46590894 | Msa1291280:CDS | 35.0% | |
| AAAGTAACACAGCAACTTCA+TGG | - | chr8_3:46590975-46590994 | Msa1291280:intron | 35.0% | |
| TAGAGATCTCTTACCTTTGT+TGG | + | chr8_3:46591227-46591246 | None:intergenic | 35.0% | |
| TTCTTAGACCCTTTGTTGAG+AGG | - | chr8_3:46588004-46588023 | Msa1291280:CDS | 40.0% | |
| CAAGCTTTCCTCTCAACAAA+GGG | + | chr8_3:46588015-46588034 | None:intergenic | 40.0% | |
| CTTTGTTGAGAGGAAAGCTT+GGG | - | chr8_3:46588014-46588033 | Msa1291280:CDS | 40.0% | |
| !!! | ATGGGTTTTGAGTACCTAGT+TGG | + | chr8_3:46588072-46588091 | None:intergenic | 40.0% |
| ! | TTGTGGTGGAAACATTGAGA+AGG | - | chr8_3:46588328-46588347 | Msa1291280:intron | 40.0% |
| TGAGAAGGTGAAGTTGAAAG+AGG | - | chr8_3:46588343-46588362 | Msa1291280:intron | 40.0% | |
| AGTTAAAACCAAGACTTGCG+AGG | - | chr8_3:46588424-46588443 | Msa1291280:intron | 40.0% | |
| CAATATCACAGCAACCAAGA+TGG | - | chr8_3:46588601-46588620 | Msa1291280:intron | 40.0% | |
| !!! | ATGTTTTGACAGGACTCAGT+TGG | - | chr8_3:46588719-46588738 | Msa1291280:intron | 40.0% |
| CAACAAGACCGCCAATAATA+GGG | + | chr8_3:46588760-46588779 | None:intergenic | 40.0% | |
| TCAACAAGACCGCCAATAAT+AGG | + | chr8_3:46588761-46588780 | None:intergenic | 40.0% | |
| GCATGATACACTTTCTCTTG+AGG | + | chr8_3:46589206-46589225 | None:intergenic | 40.0% | |
| TTATCACAGAGAGGAATAGG+AGG | - | chr8_3:46589234-46589253 | Msa1291280:intron | 40.0% | |
| ACAAGTGCCTGTTTGATTGA+CGG | - | chr8_3:46589375-46589394 | Msa1291280:intron | 40.0% | |
| AAACTCACCGTCAATCAAAC+AGG | + | chr8_3:46589385-46589404 | None:intergenic | 40.0% | |
| GTGGTGGTCAAATGTAATTC+TGG | + | chr8_3:46589409-46589428 | None:intergenic | 40.0% | |
| ! | ACATTTGACCACCACGATTT+TGG | - | chr8_3:46589414-46589433 | Msa1291280:intron | 40.0% |
| !! | ATCCTCTCAATTTTGGCAGA+TGG | - | chr8_3:46589528-46589547 | Msa1291280:CDS | 40.0% |
| CTGATTCCACTAGAAAGACA+CGG | - | chr8_3:46589749-46589768 | Msa1291280:CDS | 40.0% | |
| GTAGAAGTGAATCATATCGC+CGG | - | chr8_3:46589904-46589923 | Msa1291280:CDS | 40.0% | |
| ! | AGAAGCAAGGTGTGTTTTCA+AGG | - | chr8_3:46589959-46589978 | Msa1291280:intron | 40.0% |
| GCAAACATGACCACATTTGA+TGG | - | chr8_3:46590024-46590043 | Msa1291280:intron | 40.0% | |
| ! | CTTTGGAAGGAAGTTACAAG+TGG | + | chr8_3:46590210-46590229 | None:intergenic | 40.0% |
| ! | GCTATTTGTTACAAGCTAGC+GGG | + | chr8_3:46590261-46590280 | None:intergenic | 40.0% |
| AAATTGTCTACGGCTCTGTT+TGG | + | chr8_3:46590617-46590636 | None:intergenic | 40.0% | |
| TCTCCCTTTCTATTGTAACG+AGG | - | chr8_3:46590757-46590776 | Msa1291280:intron | 40.0% | |
| TAATATGATCCCGCAGTTCA+AGG | - | chr8_3:46591435-46591454 | Msa1291280:CDS | 40.0% | |
| ATTTCACCGAATTCTCCTAC+TGG | + | chr8_3:46591464-46591483 | None:intergenic | 40.0% | |
| CCAAGCTTTCCTCTCAACAA+AGG | + | chr8_3:46588016-46588035 | None:intergenic | 45.0% | |
| CCTTTGTTGAGAGGAAAGCT+TGG | - | chr8_3:46588013-46588032 | Msa1291280:CDS | 45.0% | |
| ! | TGGTTAGGTTGTTGCTGTTG+TGG | - | chr8_3:46588311-46588330 | Msa1291280:intron | 45.0% |
| ! | TTAGGTTGTTGCTGTTGTGG+TGG | - | chr8_3:46588314-46588333 | Msa1291280:intron | 45.0% |
| GATCTACAGTATCCATGCAG+AGG | - | chr8_3:46588575-46588594 | Msa1291280:intron | 45.0% | |
| GTGATATTGCTACCTCTGCA+TGG | + | chr8_3:46588590-46588609 | None:intergenic | 45.0% | |
| ACCAAGATGGCTTATCCATG+AGG | - | chr8_3:46588614-46588633 | Msa1291280:intron | 45.0% | |
| ACCTCATGGATAAGCCATCT+TGG | + | chr8_3:46588618-46588637 | None:intergenic | 45.0% | |
| CAAGAGGAATCAAGCATCCA+TGG | + | chr8_3:46589064-46589083 | None:intergenic | 45.0% | |
| ! | TTGCGTCTGTGGCTTTTAAG+TGG | + | chr8_3:46589101-46589120 | None:intergenic | 45.0% |
| !! | TGTAGTTCGAGTGTCGATTG+TGG | - | chr8_3:46589143-46589162 | Msa1291280:intron | 45.0% |
| !! | TCGAGTGTCGATTGTGGAAA+TGG | - | chr8_3:46589149-46589168 | Msa1291280:intron | 45.0% |
| GTCCATCTGCCAAAATTGAG+AGG | + | chr8_3:46589533-46589552 | None:intergenic | 45.0% | |
| GGACAGAGTAGCAATTCTTG+AGG | - | chr8_3:46589549-46589568 | Msa1291280:CDS | 45.0% | |
| !! | GGTCAAGGCTTTAGAAGTTG+AGG | - | chr8_3:46589627-46589646 | Msa1291280:intron | 45.0% |
| ! | CTTTAGAAGTTGAGGACCGT+GGG | - | chr8_3:46589635-46589654 | Msa1291280:intron | 45.0% |
| TTTGTAGTGTGCTCTTCCCA+CGG | + | chr8_3:46589654-46589673 | None:intergenic | 45.0% | |
| CTTTGATCAAGATCGGTGAG+AGG | + | chr8_3:46589724-46589743 | None:intergenic | 45.0% | |
| TTCCACTAGAAAGACACGGA+TGG | - | chr8_3:46589753-46589772 | Msa1291280:CDS | 45.0% | |
| ! | ACGAGGTTAAATTTTGCCCC+AGG | - | chr8_3:46590774-46590793 | Msa1291280:intron | 45.0% |
| !! | TAATTAATAAAATTCAATTA+AGG | + | chr8_3:46590446-46590465 | None:intergenic | 5.0% |
| ATCAGGACACGTCTAATCCG+AGG | + | chr8_3:46588139-46588158 | None:intergenic | 50.0% | |
| ACTAGACACGACACGGAACA+TGG | + | chr8_3:46588197-46588216 | None:intergenic | 50.0% | |
| !! | GCTTTAGAAGTTGAGGACCG+TGG | - | chr8_3:46589634-46589653 | Msa1291280:intron | 50.0% |
| ATCGGTGAGAGGTAGGTTTC+TGG | + | chr8_3:46589713-46589732 | None:intergenic | 50.0% | |
| GATCAAGATCGGTGAGAGGT+AGG | + | chr8_3:46589720-46589739 | None:intergenic | 50.0% | |
| CTCCATCCGTGTCTTTCTAG+TGG | + | chr8_3:46589758-46589777 | None:intergenic | 50.0% | |
| CACTAGAAAGACACGGATGG+AGG | - | chr8_3:46589756-46589775 | Msa1291280:CDS | 50.0% | |
| TTGTGCTGTGAGCAGAAGCA+AGG | - | chr8_3:46589946-46589965 | Msa1291280:intron | 50.0% | |
| AATATCCTGCGCAGTTGCCT+GGG | + | chr8_3:46590794-46590813 | None:intergenic | 50.0% | |
| AGGCCTCCAGTAGGAGAATT+CGG | - | chr8_3:46591455-46591474 | Msa1291280:CDS | 50.0% | |
| TCACCGAATTCTCCTACTGG+AGG | + | chr8_3:46591461-46591480 | None:intergenic | 50.0% | |
| CACGGACACTAGACACGACA+CGG | + | chr8_3:46588204-46588223 | None:intergenic | 55.0% | |
| ! | GGCGTAGCTATGTGCCGATA+TGG | + | chr8_3:46588961-46588980 | None:intergenic | 55.0% |
| ATATCCTGCGCAGTTGCCTG+GGG | + | chr8_3:46590793-46590812 | None:intergenic | 55.0% | |
| GAATATCCTGCGCAGTTGCC+TGG | + | chr8_3:46590795-46590814 | None:intergenic | 55.0% | |
| TACTGGAGGCCTTGAACTGC+GGG | + | chr8_3:46591447-46591466 | None:intergenic | 55.0% | |
| CTACTGGAGGCCTTGAACTG+CGG | + | chr8_3:46591448-46591467 | None:intergenic | 55.0% | |
| GGCAAGAGCCTCGCAAGTCT+TGG | + | chr8_3:46588435-46588454 | None:intergenic | 60.0% | |
| CGCAGTTCAAGGCCTCCAGT+AGG | - | chr8_3:46591446-46591465 | Msa1291280:CDS | 60.0% | |
| TTTGCCCCAGGCAACTGCGC+AGG | - | chr8_3:46590786-46590805 | Msa1291280:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 46587988 | 46591517 | 46587988 | ID=Msa1291280;Name=Msa1291280 |
| chr8_3 | mRNA | 46587988 | 46591517 | 46587988 | ID=Msa1291280-mRNA-1;Parent=Msa1291280;Name=Msa1291280-mRNA-1;_AED=0.10;_eAED=0.14;_QI=0|0|0|0.77|1|1|9|0|450 |
| chr8_3 | exon | 46591429 | 46591517 | 46591429 | ID=Msa1291280-mRNA-1:exon:12950;Parent=Msa1291280-mRNA-1 |
| chr8_3 | exon | 46591019 | 46591204 | 46591019 | ID=Msa1291280-mRNA-1:exon:12949;Parent=Msa1291280-mRNA-1 |
| chr8_3 | exon | 46590870 | 46590921 | 46590870 | ID=Msa1291280-mRNA-1:exon:12948;Parent=Msa1291280-mRNA-1 |
| chr8_3 | exon | 46590706 | 46590774 | 46590706 | ID=Msa1291280-mRNA-1:exon:12947;Parent=Msa1291280-mRNA-1 |
| chr8_3 | exon | 46590192 | 46590614 | 46590192 | ID=Msa1291280-mRNA-1:exon:12946;Parent=Msa1291280-mRNA-1 |
| chr8_3 | exon | 46589728 | 46589958 | 46589728 | ID=Msa1291280-mRNA-1:exon:12945;Parent=Msa1291280-mRNA-1 |
| chr8_3 | exon | 46589431 | 46589607 | 46589431 | ID=Msa1291280-mRNA-1:exon:12944;Parent=Msa1291280-mRNA-1 |
| chr8_3 | exon | 46588651 | 46588709 | 46588651 | ID=Msa1291280-mRNA-1:exon:12943;Parent=Msa1291280-mRNA-1 |
| chr8_3 | exon | 46587988 | 46588054 | 46587988 | ID=Msa1291280-mRNA-1:exon:12942;Parent=Msa1291280-mRNA-1 |
| chr8_3 | CDS | 46591429 | 46591517 | 46591429 | ID=Msa1291280-mRNA-1:cds;Parent=Msa1291280-mRNA-1 |
| chr8_3 | CDS | 46591019 | 46591204 | 46591019 | ID=Msa1291280-mRNA-1:cds;Parent=Msa1291280-mRNA-1 |
| chr8_3 | CDS | 46590870 | 46590921 | 46590870 | ID=Msa1291280-mRNA-1:cds;Parent=Msa1291280-mRNA-1 |
| chr8_3 | CDS | 46590706 | 46590774 | 46590706 | ID=Msa1291280-mRNA-1:cds;Parent=Msa1291280-mRNA-1 |
| chr8_3 | CDS | 46590192 | 46590614 | 46590192 | ID=Msa1291280-mRNA-1:cds;Parent=Msa1291280-mRNA-1 |
| chr8_3 | CDS | 46589728 | 46589958 | 46589728 | ID=Msa1291280-mRNA-1:cds;Parent=Msa1291280-mRNA-1 |
| chr8_3 | CDS | 46589431 | 46589607 | 46589431 | ID=Msa1291280-mRNA-1:cds;Parent=Msa1291280-mRNA-1 |
| chr8_3 | CDS | 46588651 | 46588709 | 46588651 | ID=Msa1291280-mRNA-1:cds;Parent=Msa1291280-mRNA-1 |
| chr8_3 | CDS | 46587988 | 46588054 | 46587988 | ID=Msa1291280-mRNA-1:cds;Parent=Msa1291280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
