Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
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Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1292650 | sp|Q9FLX8|WRK27_ARATH | 54.167 | 96 | 42 | 2 | 74 | 169 | 143 | 236 | 7.36e-24 | 102 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1292650 | A0A072TSA8 | 53.356 | 298 | 105 | 5 | 5 | 288 | 244 | 521 | 4.92e-89 | 285 |
Gene ID | Type | Classification |
---|---|---|
Msa1292650 | TF | WRKY |
Gene ID | Type | Classification |
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Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
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PPI
Gene1 | Gene2 | Type |
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Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1292650 | MtrunA17_Chr2g0289181 | 43.966 | 232 | 117 | 2 | 84 | 302 | 1 | 232 | 6.69e-56 | 181 |
Msa1292650 | MtrunA17_Chr1g0202461 | 56.000 | 100 | 42 | 2 | 74 | 173 | 239 | 336 | 5.44e-29 | 114 |
Msa1292650 | MtrunA17_Chr8g0348311 | 52.830 | 106 | 47 | 2 | 87 | 190 | 145 | 249 | 4.75e-27 | 108 |
Msa1292650 | MtrunA17_Chr7g0248691 | 46.875 | 128 | 51 | 3 | 42 | 169 | 115 | 225 | 3.45e-24 | 100 |
Msa1292650 | MtrunA17_Chr8g0387501 | 58.750 | 80 | 32 | 1 | 90 | 169 | 122 | 200 | 2.33e-23 | 97.1 |
Msa1292650 | MtrunA17_Chr6g0470151 | 42.241 | 116 | 66 | 1 | 5 | 120 | 239 | 353 | 1.05e-20 | 91.3 |
Msa1292650 | MtrunA17_Chr2g0284321 | 37.143 | 140 | 70 | 2 | 74 | 195 | 12 | 151 | 2.70e-20 | 87.4 |
Msa1292650 | MtrunA17_Chr7g0266611 | 36.486 | 148 | 82 | 2 | 152 | 287 | 2 | 149 | 8.45e-20 | 84.7 |
Msa1292650 | MtrunA17_Chr2g0293481 | 53.846 | 78 | 35 | 1 | 92 | 169 | 262 | 338 | 1.65e-19 | 88.6 |
Msa1292650 | MtrunA17_Chr4g0053281 | 55.263 | 76 | 33 | 1 | 83 | 158 | 253 | 327 | 9.76e-19 | 85.1 |
Msa1292650 | MtrunA17_Chr7g0249311 | 50.000 | 86 | 41 | 2 | 87 | 172 | 169 | 252 | 1.07e-18 | 86.7 |
Msa1292650 | MtrunA17_Chr7g0249311 | 47.297 | 74 | 38 | 1 | 95 | 168 | 390 | 462 | 5.63e-15 | 75.5 |
Msa1292650 | MtrunA17_Chr5g0401821 | 55.556 | 72 | 31 | 1 | 83 | 154 | 186 | 256 | 1.10e-18 | 84.0 |
Msa1292650 | MtrunA17_Chr2g0319961 | 63.333 | 60 | 22 | 0 | 98 | 157 | 81 | 140 | 1.12e-18 | 84.0 |
Msa1292650 | MtrunA17_Chr3g0139021 | 51.190 | 84 | 36 | 2 | 77 | 156 | 291 | 373 | 2.05e-18 | 85.1 |
Msa1292650 | MtrunA17_Chr1g0184691 | 62.121 | 66 | 21 | 1 | 98 | 159 | 294 | 359 | 2.10e-18 | 84.3 |
Msa1292650 | MtrunA17_Chr7g0249301 | 48.837 | 86 | 42 | 2 | 87 | 172 | 52 | 135 | 2.80e-18 | 84.3 |
Msa1292650 | MtrunA17_Chr7g0249301 | 51.562 | 64 | 30 | 1 | 95 | 158 | 290 | 352 | 1.20e-13 | 70.9 |
Msa1292650 | MtrunA17_Chr3g0079691 | 51.724 | 87 | 39 | 3 | 82 | 168 | 266 | 349 | 3.72e-18 | 85.1 |
Msa1292650 | MtrunA17_Chr3g0079691 | 46.479 | 71 | 37 | 1 | 95 | 165 | 493 | 562 | 3.86e-14 | 72.8 |
Msa1292650 | MtrunA17_Chr7g0228941 | 48.718 | 78 | 39 | 1 | 83 | 160 | 39 | 115 | 7.86e-18 | 78.2 |
Msa1292650 | MtrunA17_Chr8g0379461 | 51.471 | 68 | 33 | 0 | 98 | 165 | 77 | 144 | 1.46e-17 | 80.5 |
Msa1292650 | MtrunA17_Chr4g0071521 | 49.398 | 83 | 41 | 1 | 72 | 154 | 221 | 302 | 2.44e-17 | 80.9 |
Msa1292650 | MtrunA17_Chr7g0263531 | 43.750 | 96 | 52 | 2 | 81 | 176 | 173 | 266 | 2.52e-17 | 82.0 |
Msa1292650 | MtrunA17_Chr7g0263531 | 40.196 | 102 | 44 | 3 | 74 | 160 | 324 | 423 | 2.60e-14 | 73.2 |
Msa1292650 | MtrunA17_Chr1g0147881 | 44.211 | 95 | 52 | 1 | 72 | 166 | 238 | 331 | 2.68e-17 | 81.3 |
Msa1292650 | MtrunA17_Chr5g0447701 | 33.149 | 181 | 90 | 9 | 93 | 269 | 88 | 241 | 3.94e-17 | 81.3 |
Msa1292650 | MtrunA17_Chr5g0447701 | 41.892 | 74 | 42 | 1 | 86 | 159 | 241 | 313 | 1.78e-12 | 67.4 |
Msa1292650 | MtrunA17_Chr8g0366951 | 43.925 | 107 | 40 | 2 | 182 | 288 | 12 | 98 | 4.19e-17 | 75.9 |
Msa1292650 | MtrunA17_Chr7g0218081 | 40.000 | 100 | 58 | 2 | 62 | 161 | 193 | 290 | 5.51e-17 | 81.3 |
Msa1292650 | MtrunA17_Chr7g0218081 | 46.914 | 81 | 41 | 2 | 97 | 176 | 410 | 489 | 1.20e-15 | 77.0 |
Msa1292650 | MtrunA17_Chr7g0243891 | 52.632 | 76 | 34 | 2 | 89 | 164 | 208 | 281 | 8.99e-17 | 80.5 |
Msa1292650 | MtrunA17_Chr7g0243891 | 46.875 | 64 | 33 | 1 | 95 | 158 | 372 | 434 | 8.96e-12 | 65.5 |
Msa1292650 | MtrunA17_Chr7g0270051 | 48.611 | 72 | 37 | 0 | 87 | 158 | 43 | 114 | 1.31e-16 | 78.2 |
Msa1292650 | MtrunA17_Chr4g0074001 | 42.697 | 89 | 38 | 2 | 69 | 157 | 343 | 418 | 3.38e-16 | 79.0 |
Msa1292650 | MtrunA17_Chr3g0106491 | 47.959 | 98 | 37 | 5 | 74 | 164 | 174 | 264 | 9.78e-16 | 77.4 |
Msa1292650 | MtrunA17_Chr3g0106491 | 46.875 | 64 | 33 | 1 | 95 | 158 | 363 | 425 | 4.75e-12 | 66.2 |
Msa1292650 | MtrunA17_Chr4g0042831 | 50.000 | 68 | 33 | 1 | 97 | 164 | 278 | 344 | 4.25e-15 | 75.1 |
Msa1292650 | MtrunA17_Chr4g0042831 | 44.444 | 81 | 44 | 1 | 88 | 168 | 136 | 215 | 2.82e-14 | 72.8 |
Msa1292650 | MtrunA17_Chr6g0470161 | 48.235 | 85 | 43 | 1 | 219 | 302 | 35 | 119 | 8.04e-15 | 69.7 |
Msa1292650 | MtrunA17_Chr3g0101131 | 43.878 | 98 | 47 | 3 | 75 | 166 | 215 | 310 | 1.31e-14 | 74.3 |
Msa1292650 | MtrunA17_Chr3g0101131 | 44.286 | 70 | 38 | 1 | 95 | 164 | 413 | 481 | 1.63e-13 | 70.9 |
Msa1292650 | MtrunA17_Chr5g0418191 | 47.826 | 69 | 35 | 1 | 97 | 165 | 320 | 387 | 3.42e-14 | 72.8 |
Msa1292650 | MtrunA17_Chr5g0418191 | 47.368 | 76 | 38 | 2 | 88 | 163 | 142 | 215 | 3.39e-13 | 69.7 |
Msa1292650 | MtrunA17_Chr2g0294231 | 47.692 | 65 | 33 | 1 | 97 | 161 | 203 | 266 | 7.91e-14 | 71.2 |
Msa1292650 | MtrunA17_Chr5g0443131 | 49.231 | 65 | 32 | 1 | 97 | 161 | 157 | 220 | 9.18e-14 | 70.5 |
Msa1292650 | MtrunA17_Chr3g0128671 | 41.489 | 94 | 46 | 3 | 61 | 152 | 98 | 184 | 1.04e-13 | 70.5 |
Msa1292650 | MtrunA17_Chr7g0270191 | 35.398 | 113 | 63 | 3 | 77 | 189 | 126 | 228 | 1.40e-13 | 70.1 |
Msa1292650 | MtrunA17_Chr5g0445311 | 46.875 | 64 | 33 | 1 | 95 | 158 | 362 | 424 | 2.16e-13 | 70.5 |
Msa1292650 | MtrunA17_Chr5g0445311 | 51.613 | 62 | 28 | 2 | 96 | 157 | 199 | 258 | 4.73e-12 | 66.2 |
Msa1292650 | MtrunA17_Chr4g0004911 | 48.438 | 64 | 32 | 1 | 94 | 157 | 181 | 243 | 3.51e-13 | 69.7 |
Msa1292650 | MtrunA17_Chr4g0004911 | 47.619 | 63 | 32 | 1 | 95 | 157 | 334 | 395 | 3.32e-12 | 66.6 |
Msa1292650 | MtrunA17_Chr5g0432161 | 51.562 | 64 | 29 | 2 | 94 | 157 | 241 | 302 | 3.54e-13 | 69.7 |
Msa1292650 | MtrunA17_Chr5g0432161 | 48.438 | 64 | 32 | 1 | 95 | 158 | 419 | 481 | 7.38e-13 | 68.9 |
Msa1292650 | MtrunA17_Chr1g0194481 | 37.778 | 90 | 54 | 2 | 77 | 166 | 139 | 226 | 3.78e-13 | 68.9 |
Msa1292650 | MtrunA17_Chr7g0238921 | 44.737 | 76 | 41 | 1 | 79 | 154 | 106 | 180 | 4.24e-13 | 68.6 |
Msa1292650 | MtrunA17_Chr4g0051881 | 47.692 | 65 | 33 | 1 | 97 | 161 | 178 | 241 | 4.59e-13 | 68.9 |
Msa1292650 | MtrunA17_Chr8g0387981 | 40.230 | 87 | 46 | 2 | 72 | 152 | 103 | 189 | 5.46e-13 | 68.6 |
Msa1292650 | MtrunA17_Chr2g0302391 | 46.667 | 60 | 32 | 0 | 98 | 157 | 212 | 271 | 6.83e-13 | 68.6 |
Msa1292650 | MtrunA17_Chr8g0347251 | 40.404 | 99 | 49 | 3 | 64 | 152 | 95 | 193 | 7.04e-13 | 68.2 |
Msa1292650 | MtrunA17_Chr5g0418781 | 32.759 | 116 | 76 | 2 | 64 | 179 | 92 | 205 | 1.03e-12 | 67.0 |
Msa1292650 | MtrunA17_Chr3g0099641 | 41.333 | 75 | 43 | 1 | 83 | 157 | 238 | 311 | 1.19e-12 | 68.2 |
Msa1292650 | MtrunA17_Chr8g0335811 | 44.928 | 69 | 36 | 2 | 95 | 163 | 152 | 218 | 2.01e-12 | 65.5 |
Msa1292650 | MtrunA17_Chr4g0068541 | 41.429 | 70 | 40 | 1 | 97 | 166 | 208 | 276 | 2.49e-12 | 67.0 |
Msa1292650 | MtrunA17_Chr3g0126391 | 46.552 | 58 | 29 | 1 | 97 | 152 | 133 | 190 | 2.59e-12 | 66.6 |
Msa1292650 | MtrunA17_Chr2g0333851 | 40.000 | 75 | 40 | 1 | 95 | 164 | 167 | 241 | 3.53e-12 | 65.9 |
Msa1292650 | MtrunA17_Chr8g0366921 | 45.977 | 87 | 34 | 2 | 5 | 78 | 234 | 320 | 1.17e-11 | 64.3 |
Msa1292650 | MtrunA17_Chr8g0383351 | 42.424 | 66 | 36 | 2 | 95 | 160 | 158 | 221 | 1.19e-11 | 63.5 |
Msa1292650 | MtrunA17_Chr7g0270831 | 45.000 | 60 | 33 | 0 | 98 | 157 | 217 | 276 | 1.52e-11 | 64.7 |
Msa1292650 | MtrunA17_Chr5g0428351 | 46.377 | 69 | 35 | 1 | 98 | 164 | 184 | 252 | 1.62e-11 | 63.9 |
Msa1292650 | MtrunA17_Chr3g0129321 | 40.909 | 66 | 38 | 1 | 94 | 159 | 115 | 179 | 1.85e-11 | 62.4 |
Msa1292650 | MtrunA17_Chr7g0216891 | 47.368 | 57 | 30 | 0 | 98 | 154 | 220 | 276 | 1.91e-11 | 64.7 |
Msa1292650 | MtrunA17_Chr3g0129361 | 43.077 | 65 | 35 | 2 | 95 | 159 | 142 | 204 | 1.96e-11 | 62.8 |
Msa1292650 | MtrunA17_Chr1g0150271 | 41.270 | 63 | 37 | 0 | 95 | 157 | 99 | 161 | 2.20e-11 | 63.2 |
Msa1292650 | MtrunA17_Chr2g0288871 | 41.333 | 75 | 43 | 1 | 83 | 157 | 292 | 365 | 2.40e-11 | 64.3 |
Msa1292650 | MtrunA17_Chr7g0248721 | 35.556 | 90 | 54 | 3 | 67 | 154 | 109 | 196 | 2.58e-11 | 62.4 |
Msa1292650 | MtrunA17_Chr7g0224801 | 41.667 | 60 | 34 | 1 | 95 | 154 | 91 | 149 | 3.31e-11 | 61.2 |
Msa1292650 | MtrunA17_Chr6g0485431 | 44.928 | 69 | 35 | 3 | 90 | 157 | 148 | 214 | 3.37e-11 | 63.5 |
Msa1292650 | MtrunA17_Chr8g0383251 | 30.827 | 133 | 80 | 6 | 35 | 157 | 37 | 167 | 3.45e-11 | 61.2 |
Msa1292650 | MtrunA17_Chr4g0025061 | 45.902 | 61 | 33 | 0 | 98 | 158 | 361 | 421 | 3.52e-11 | 63.9 |
Msa1292650 | MtrunA17_Chr4g0001361 | 41.270 | 63 | 37 | 0 | 95 | 157 | 160 | 222 | 4.26e-11 | 62.8 |
Msa1292650 | MtrunA17_Chr5g0432071 | 35.354 | 99 | 54 | 4 | 73 | 171 | 87 | 175 | 5.79e-11 | 61.2 |
Msa1292650 | MtrunA17_Chr4g0060271 | 45.000 | 60 | 33 | 0 | 98 | 157 | 256 | 315 | 6.03e-11 | 63.2 |
Msa1292650 | MtrunA17_Chr4g0051181 | 45.902 | 61 | 33 | 0 | 98 | 158 | 244 | 304 | 6.82e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1292650 | AT5G52830.1 | 54.167 | 96 | 42 | 2 | 74 | 169 | 143 | 236 | 7.48e-25 | 102 |
Msa1292650 | AT4G01250.1 | 43.846 | 130 | 68 | 4 | 41 | 169 | 74 | 199 | 3.12e-24 | 100 |
Msa1292650 | AT4G23550.1 | 52.809 | 89 | 41 | 1 | 81 | 169 | 124 | 211 | 1.57e-23 | 98.6 |
Msa1292650 | AT5G45050.4 | 48.889 | 90 | 45 | 1 | 77 | 166 | 1021 | 1109 | 3.18e-20 | 91.7 |
Msa1292650 | AT5G45050.1 | 44.762 | 105 | 57 | 1 | 62 | 166 | 1145 | 1248 | 3.71e-20 | 91.7 |
Msa1292650 | AT5G45050.2 | 44.762 | 105 | 57 | 1 | 62 | 166 | 1117 | 1220 | 3.98e-20 | 91.3 |
Msa1292650 | AT1G29280.1 | 56.716 | 67 | 29 | 0 | 98 | 164 | 75 | 141 | 1.99e-19 | 86.3 |
Msa1292650 | AT4G24240.1 | 45.763 | 118 | 57 | 3 | 41 | 154 | 224 | 338 | 1.02e-18 | 85.9 |
Msa1292650 | AT4G31550.1 | 48.352 | 91 | 46 | 1 | 72 | 162 | 222 | 311 | 1.09e-18 | 85.5 |
Msa1292650 | AT4G31550.2 | 48.352 | 91 | 46 | 1 | 72 | 162 | 221 | 310 | 1.26e-18 | 85.1 |
Msa1292650 | AT2G34830.2 | 49.398 | 83 | 41 | 1 | 84 | 166 | 211 | 292 | 2.29e-18 | 85.5 |
Msa1292650 | AT2G34830.1 | 49.398 | 83 | 41 | 1 | 84 | 166 | 202 | 283 | 2.32e-18 | 85.5 |
Msa1292650 | AT3G58710.2 | 56.061 | 66 | 29 | 0 | 98 | 163 | 71 | 136 | 4.63e-18 | 82.8 |
Msa1292650 | AT2G23320.1 | 62.069 | 58 | 22 | 0 | 98 | 155 | 241 | 298 | 4.77e-18 | 83.6 |
Msa1292650 | AT3G58710.1 | 56.061 | 66 | 29 | 0 | 98 | 163 | 72 | 137 | 4.84e-18 | 82.8 |
Msa1292650 | AT3G04670.1 | 62.712 | 59 | 22 | 0 | 98 | 156 | 263 | 321 | 6.04e-18 | 83.2 |
Msa1292650 | AT2G24570.1 | 49.412 | 85 | 42 | 1 | 72 | 156 | 219 | 302 | 1.22e-17 | 82.4 |
Msa1292650 | AT1G30650.1 | 49.398 | 83 | 41 | 1 | 84 | 166 | 204 | 285 | 1.48e-17 | 83.2 |
Msa1292650 | AT5G28650.1 | 61.017 | 59 | 23 | 0 | 98 | 156 | 263 | 321 | 1.52e-17 | 82.0 |
Msa1292650 | AT3G01080.3 | 48.611 | 72 | 35 | 2 | 93 | 164 | 201 | 270 | 7.06e-17 | 80.1 |
Msa1292650 | AT4G26440.1 | 50.685 | 73 | 34 | 2 | 96 | 168 | 177 | 247 | 1.24e-16 | 80.5 |
Msa1292650 | AT4G26440.1 | 44.595 | 74 | 40 | 1 | 95 | 168 | 370 | 442 | 1.03e-14 | 74.7 |
Msa1292650 | AT3G01080.2 | 48.611 | 72 | 35 | 2 | 93 | 164 | 201 | 270 | 2.70e-16 | 79.3 |
Msa1292650 | AT3G01080.2 | 50.820 | 61 | 29 | 1 | 97 | 157 | 344 | 403 | 5.22e-14 | 72.4 |
Msa1292650 | AT3G01080.1 | 48.611 | 72 | 35 | 2 | 93 | 164 | 163 | 232 | 3.49e-16 | 79.0 |
Msa1292650 | AT3G01080.1 | 50.820 | 61 | 29 | 1 | 97 | 157 | 306 | 365 | 6.60e-14 | 72.0 |
Msa1292650 | AT2G30590.1 | 49.398 | 83 | 39 | 1 | 77 | 156 | 290 | 372 | 5.18e-16 | 78.2 |
Msa1292650 | AT1G13960.1 | 50.000 | 72 | 34 | 2 | 93 | 164 | 225 | 294 | 7.60e-16 | 78.2 |
Msa1292650 | AT1G13960.1 | 49.180 | 61 | 30 | 1 | 97 | 157 | 409 | 468 | 3.68e-13 | 70.1 |
Msa1292650 | AT2G03340.1 | 50.685 | 73 | 34 | 2 | 92 | 164 | 245 | 315 | 1.30e-15 | 77.4 |
Msa1292650 | AT2G03340.1 | 48.529 | 68 | 34 | 1 | 97 | 164 | 415 | 481 | 1.39e-14 | 74.3 |
Msa1292650 | AT1G13960.2 | 50.000 | 72 | 34 | 2 | 93 | 164 | 72 | 141 | 1.47e-15 | 76.6 |
Msa1292650 | AT1G13960.2 | 49.180 | 61 | 30 | 1 | 97 | 157 | 256 | 315 | 6.80e-13 | 68.9 |
Msa1292650 | AT2G37260.1 | 45.349 | 86 | 41 | 3 | 74 | 155 | 323 | 406 | 1.64e-15 | 77.0 |
Msa1292650 | AT2G37260.1 | 40.385 | 104 | 49 | 4 | 55 | 158 | 134 | 224 | 3.78e-14 | 72.8 |
Msa1292650 | AT2G37260.3 | 45.349 | 86 | 41 | 3 | 74 | 155 | 243 | 326 | 2.13e-15 | 76.3 |
Msa1292650 | AT2G37260.3 | 40.385 | 104 | 49 | 4 | 55 | 158 | 54 | 144 | 5.23e-14 | 72.0 |
Msa1292650 | AT2G37260.2 | 45.349 | 86 | 41 | 3 | 74 | 155 | 241 | 324 | 2.31e-15 | 75.9 |
Msa1292650 | AT2G37260.2 | 40.385 | 104 | 49 | 4 | 55 | 158 | 52 | 142 | 5.47e-14 | 72.0 |
Msa1292650 | AT5G56270.1 | 51.429 | 70 | 32 | 2 | 96 | 165 | 272 | 339 | 2.85e-15 | 76.6 |
Msa1292650 | AT5G56270.1 | 48.438 | 64 | 32 | 1 | 95 | 158 | 485 | 547 | 2.42e-13 | 70.9 |
Msa1292650 | AT5G07100.1 | 44.000 | 75 | 41 | 1 | 90 | 164 | 110 | 183 | 3.74e-14 | 72.0 |
Msa1292650 | AT5G07100.1 | 44.118 | 68 | 37 | 1 | 95 | 162 | 232 | 298 | 1.94e-12 | 67.0 |
Msa1292650 | AT5G07100.2 | 44.000 | 75 | 41 | 1 | 90 | 164 | 17 | 90 | 5.54e-14 | 70.1 |
Msa1292650 | AT5G07100.2 | 44.118 | 68 | 37 | 1 | 95 | 162 | 139 | 205 | 3.53e-12 | 65.1 |
Msa1292650 | AT5G07100.4 | 44.000 | 75 | 41 | 1 | 90 | 164 | 17 | 90 | 5.54e-14 | 70.1 |
Msa1292650 | AT5G07100.4 | 44.118 | 68 | 37 | 1 | 95 | 162 | 139 | 205 | 3.53e-12 | 65.1 |
Msa1292650 | AT5G07100.5 | 44.000 | 75 | 41 | 1 | 90 | 164 | 17 | 90 | 5.54e-14 | 70.1 |
Msa1292650 | AT5G07100.5 | 44.118 | 68 | 37 | 1 | 95 | 162 | 139 | 205 | 3.53e-12 | 65.1 |
Msa1292650 | AT5G07100.3 | 44.000 | 75 | 41 | 1 | 90 | 164 | 17 | 90 | 5.54e-14 | 70.1 |
Msa1292650 | AT5G07100.3 | 44.118 | 68 | 37 | 1 | 95 | 162 | 139 | 205 | 3.53e-12 | 65.1 |
Msa1292650 | AT5G41570.1 | 40.000 | 85 | 48 | 2 | 72 | 154 | 71 | 154 | 6.85e-14 | 69.3 |
Msa1292650 | AT2G47260.1 | 40.000 | 90 | 52 | 2 | 77 | 166 | 155 | 242 | 7.08e-14 | 71.6 |
Msa1292650 | AT1G64000.1 | 46.774 | 62 | 32 | 1 | 93 | 154 | 110 | 170 | 7.35e-14 | 69.3 |
Msa1292650 | AT4G30935.1 | 42.466 | 73 | 41 | 1 | 86 | 158 | 320 | 391 | 7.99e-14 | 72.0 |
Msa1292650 | AT2G38470.1 | 51.389 | 72 | 32 | 3 | 87 | 157 | 173 | 242 | 1.08e-13 | 71.6 |
Msa1292650 | AT2G38470.1 | 43.529 | 85 | 44 | 3 | 95 | 179 | 360 | 440 | 1.15e-12 | 68.6 |
Msa1292650 | AT1G66550.2 | 54.386 | 57 | 24 | 1 | 98 | 152 | 104 | 160 | 1.32e-13 | 69.7 |
Msa1292650 | AT1G66550.1 | 54.386 | 57 | 24 | 1 | 98 | 152 | 109 | 165 | 1.47e-13 | 69.7 |
Msa1292650 | AT2G46130.1 | 46.667 | 60 | 31 | 1 | 95 | 154 | 28 | 86 | 5.23e-13 | 64.7 |
Msa1292650 | AT5G43290.1 | 50.794 | 63 | 30 | 1 | 92 | 154 | 109 | 170 | 5.49e-13 | 68.2 |
Msa1292650 | AT5G46350.1 | 37.500 | 112 | 62 | 4 | 83 | 188 | 170 | 279 | 6.52e-13 | 68.6 |
Msa1292650 | AT5G45260.1 | 45.455 | 66 | 34 | 1 | 98 | 161 | 1209 | 1274 | 8.60e-13 | 69.3 |
Msa1292650 | AT2G30250.1 | 45.455 | 77 | 39 | 3 | 81 | 157 | 151 | 224 | 8.61e-13 | 68.6 |
Msa1292650 | AT2G30250.1 | 48.485 | 66 | 33 | 1 | 98 | 163 | 329 | 393 | 1.24e-12 | 68.2 |
Msa1292650 | AT4G18170.1 | 40.698 | 86 | 49 | 2 | 77 | 162 | 153 | 236 | 8.85e-13 | 68.2 |
Msa1292650 | AT4G39410.1 | 40.506 | 79 | 45 | 2 | 95 | 173 | 221 | 297 | 9.03e-13 | 68.2 |
Msa1292650 | AT2G21900.1 | 48.387 | 62 | 31 | 1 | 97 | 158 | 109 | 169 | 9.43e-13 | 66.6 |
Msa1292650 | AT5G22570.1 | 53.226 | 62 | 27 | 1 | 93 | 152 | 106 | 167 | 1.03e-12 | 67.8 |
Msa1292650 | AT1G69310.4 | 38.298 | 94 | 56 | 2 | 61 | 154 | 112 | 203 | 1.19e-12 | 67.4 |
Msa1292650 | AT1G69310.2 | 38.298 | 94 | 56 | 2 | 61 | 154 | 112 | 203 | 1.19e-12 | 67.4 |
Msa1292650 | AT1G69310.1 | 38.298 | 94 | 56 | 2 | 61 | 154 | 112 | 203 | 1.19e-12 | 67.4 |
Msa1292650 | AT4G26640.7 | 42.857 | 70 | 39 | 1 | 95 | 164 | 339 | 407 | 1.46e-12 | 68.2 |
Msa1292650 | AT4G26640.7 | 36.893 | 103 | 62 | 3 | 95 | 196 | 169 | 269 | 3.02e-12 | 67.4 |
Msa1292650 | AT2G46400.1 | 32.414 | 145 | 84 | 4 | 17 | 155 | 28 | 164 | 1.48e-12 | 67.4 |
Msa1292650 | AT4G26640.2 | 42.857 | 70 | 39 | 1 | 95 | 164 | 379 | 447 | 1.72e-12 | 68.2 |
Msa1292650 | AT4G26640.2 | 36.893 | 103 | 62 | 3 | 95 | 196 | 209 | 309 | 3.45e-12 | 67.4 |
Msa1292650 | AT4G26640.1 | 42.857 | 70 | 39 | 1 | 95 | 164 | 307 | 375 | 1.86e-12 | 67.8 |
Msa1292650 | AT4G26640.1 | 36.893 | 103 | 62 | 3 | 95 | 196 | 137 | 237 | 3.32e-12 | 67.4 |
Msa1292650 | AT4G26640.5 | 42.857 | 70 | 39 | 1 | 95 | 164 | 203 | 271 | 3.10e-12 | 67.0 |
Msa1292650 | AT4G26640.5 | 36.893 | 103 | 62 | 3 | 95 | 196 | 33 | 133 | 4.88e-12 | 66.2 |
Msa1292650 | AT4G26640.6 | 42.857 | 70 | 39 | 1 | 95 | 164 | 203 | 271 | 3.10e-12 | 67.0 |
Msa1292650 | AT4G26640.6 | 36.893 | 103 | 62 | 3 | 95 | 196 | 33 | 133 | 4.88e-12 | 66.2 |
Msa1292650 | AT4G26640.4 | 42.857 | 70 | 39 | 1 | 95 | 164 | 203 | 271 | 3.10e-12 | 67.0 |
Msa1292650 | AT4G26640.4 | 36.893 | 103 | 62 | 3 | 95 | 196 | 33 | 133 | 4.88e-12 | 66.2 |
Msa1292650 | AT4G26640.3 | 42.857 | 70 | 39 | 1 | 95 | 164 | 203 | 271 | 3.10e-12 | 67.0 |
Msa1292650 | AT4G26640.3 | 36.893 | 103 | 62 | 3 | 95 | 196 | 33 | 133 | 4.88e-12 | 66.2 |
Msa1292650 | AT2G04880.1 | 43.590 | 78 | 42 | 2 | 80 | 157 | 291 | 366 | 4.03e-12 | 67.0 |
Msa1292650 | AT2G04880.1 | 47.692 | 65 | 32 | 2 | 93 | 157 | 107 | 169 | 5.31e-12 | 66.6 |
Msa1292650 | AT2G04880.2 | 50.000 | 60 | 29 | 1 | 98 | 157 | 284 | 342 | 4.34e-12 | 66.6 |
Msa1292650 | AT2G04880.2 | 47.692 | 65 | 32 | 2 | 93 | 157 | 107 | 169 | 6.09e-12 | 66.2 |
Msa1292650 | AT5G01900.1 | 32.090 | 134 | 75 | 4 | 69 | 198 | 81 | 202 | 4.96e-12 | 65.5 |
Msa1292650 | AT2G44745.1 | 46.667 | 60 | 31 | 1 | 95 | 154 | 143 | 201 | 5.15e-12 | 64.7 |
Msa1292650 | AT1G80840.1 | 38.462 | 78 | 47 | 1 | 95 | 172 | 144 | 220 | 6.33e-12 | 65.5 |
Msa1292650 | AT1G80590.1 | 43.678 | 87 | 41 | 3 | 98 | 176 | 86 | 172 | 6.85e-12 | 64.7 |
Msa1292650 | AT2G25000.2 | 36.145 | 83 | 48 | 1 | 80 | 157 | 81 | 163 | 7.16e-12 | 64.3 |
Msa1292650 | AT2G25000.4 | 36.145 | 83 | 48 | 1 | 80 | 157 | 81 | 163 | 7.16e-12 | 64.3 |
Msa1292650 | AT4G04450.2 | 37.500 | 88 | 51 | 1 | 98 | 181 | 199 | 286 | 7.53e-12 | 65.9 |
Msa1292650 | AT4G23810.1 | 44.318 | 88 | 41 | 4 | 73 | 153 | 130 | 216 | 7.88e-12 | 65.5 |
Msa1292650 | AT1G55600.1 | 48.333 | 60 | 30 | 1 | 98 | 157 | 308 | 366 | 8.13e-12 | 65.9 |
Msa1292650 | AT2G25000.3 | 36.145 | 83 | 48 | 1 | 80 | 157 | 103 | 185 | 8.18e-12 | 64.7 |
Msa1292650 | AT1G66560.1 | 50.000 | 58 | 27 | 1 | 97 | 152 | 103 | 160 | 8.25e-12 | 64.7 |
Msa1292650 | AT5G49520.1 | 44.615 | 65 | 35 | 1 | 97 | 161 | 221 | 284 | 8.33e-12 | 65.9 |
Msa1292650 | AT2G40740.1 | 38.636 | 88 | 49 | 2 | 71 | 153 | 144 | 231 | 9.50e-12 | 65.1 |
Msa1292650 | AT2G40740.3 | 39.080 | 87 | 48 | 2 | 71 | 152 | 153 | 239 | 1.03e-11 | 65.1 |
Msa1292650 | AT5G26170.1 | 47.541 | 61 | 31 | 1 | 94 | 154 | 110 | 169 | 1.20e-11 | 62.8 |
Msa1292650 | AT2G25000.1 | 36.145 | 83 | 48 | 1 | 80 | 157 | 124 | 206 | 1.53e-11 | 63.9 |
Msa1292650 | AT1G66600.1 | 48.276 | 58 | 28 | 1 | 97 | 152 | 103 | 160 | 1.82e-11 | 63.5 |
Msa1292650 | AT4G04450.1 | 37.500 | 88 | 51 | 1 | 98 | 181 | 293 | 380 | 1.90e-11 | 65.1 |
Msa1292650 | AT4G11070.2 | 42.105 | 95 | 47 | 4 | 65 | 152 | 73 | 166 | 2.03e-11 | 63.9 |
Msa1292650 | AT1G29860.1 | 44.776 | 67 | 36 | 1 | 97 | 163 | 136 | 201 | 2.13e-11 | 63.9 |
Msa1292650 | AT4G11070.1 | 42.105 | 95 | 47 | 4 | 65 | 152 | 105 | 198 | 2.20e-11 | 63.9 |
Msa1292650 | AT3G01970.1 | 42.647 | 68 | 36 | 2 | 95 | 160 | 63 | 129 | 2.61e-11 | 61.2 |
Msa1292650 | AT4G22070.4 | 45.000 | 60 | 33 | 0 | 98 | 157 | 298 | 357 | 2.64e-11 | 64.7 |
Msa1292650 | AT4G22070.3 | 45.000 | 60 | 33 | 0 | 98 | 157 | 298 | 357 | 2.64e-11 | 64.7 |
Msa1292650 | AT4G22070.2 | 45.000 | 60 | 33 | 0 | 98 | 157 | 298 | 357 | 2.64e-11 | 64.7 |
Msa1292650 | AT4G22070.1 | 45.000 | 60 | 33 | 0 | 98 | 157 | 298 | 357 | 2.64e-11 | 64.7 |
Msa1292650 | AT1G62300.1 | 45.000 | 60 | 33 | 0 | 98 | 157 | 313 | 372 | 3.28e-11 | 64.3 |
Msa1292650 | AT5G64810.1 | 47.761 | 67 | 30 | 3 | 95 | 159 | 108 | 171 | 3.58e-11 | 62.0 |
Msa1292650 | AT3G62340.1 | 36.145 | 83 | 50 | 2 | 77 | 157 | 96 | 177 | 4.22e-11 | 62.8 |
Msa1292650 | AT5G15130.2 | 45.000 | 60 | 33 | 0 | 98 | 157 | 186 | 245 | 4.87e-11 | 63.5 |
Msa1292650 | AT4G01720.1 | 33.333 | 111 | 59 | 2 | 61 | 157 | 190 | 299 | 4.99e-11 | 63.5 |
Msa1292650 | AT5G24110.1 | 37.975 | 79 | 47 | 1 | 83 | 159 | 99 | 177 | 5.06e-11 | 62.8 |
Msa1292650 | AT5G15130.1 | 45.000 | 60 | 33 | 0 | 98 | 157 | 228 | 287 | 5.84e-11 | 63.5 |
Msa1292650 | AT4G12020.3 | 40.741 | 81 | 43 | 3 | 92 | 172 | 463 | 538 | 6.25e-11 | 63.9 |
Msa1292650 | AT4G12020.7 | 40.741 | 81 | 43 | 3 | 92 | 172 | 463 | 538 | 6.50e-11 | 63.9 |
Msa1292650 | AT4G12020.10 | 40.741 | 81 | 43 | 3 | 92 | 172 | 463 | 538 | 6.54e-11 | 63.9 |
Msa1292650 | AT4G12020.4 | 40.741 | 81 | 43 | 3 | 92 | 172 | 463 | 538 | 6.72e-11 | 63.9 |
Msa1292650 | AT4G12020.6 | 40.741 | 81 | 43 | 3 | 92 | 172 | 463 | 538 | 6.79e-11 | 63.9 |
Msa1292650 | AT4G12020.8 | 40.741 | 81 | 43 | 3 | 92 | 172 | 463 | 538 | 6.79e-11 | 63.9 |
Msa1292650 | AT4G12020.2 | 40.741 | 81 | 43 | 3 | 92 | 172 | 463 | 538 | 6.85e-11 | 63.9 |
Msa1292650 | AT4G12020.5 | 40.741 | 81 | 43 | 3 | 92 | 172 | 396 | 471 | 7.13e-11 | 63.5 |
Msa1292650 | AT4G12020.1 | 40.741 | 81 | 43 | 3 | 92 | 172 | 463 | 538 | 7.19e-11 | 63.5 |
Msa1292650 | AT4G12020.9 | 40.741 | 81 | 43 | 3 | 92 | 172 | 463 | 538 | 7.19e-11 | 63.5 |
Msa1292650 | AT1G69810.1 | 41.667 | 72 | 41 | 1 | 98 | 168 | 204 | 275 | 9.61e-11 | 62.4 |
Msa1292650 | AT1G69810.2 | 41.667 | 72 | 41 | 1 | 98 | 168 | 146 | 217 | 9.96e-11 | 62.4 |
Find 61 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATCCAATTCTTCAATATTT+TGG | 0.050319 | 8_3:-48996726 | None:intergenic |
GTCGATTTCACGTCGAAATT+TGG | 0.080896 | 8_3:-48995151 | None:intergenic |
ATAAATTTCGCTTCTGTATA+CGG | 0.189013 | 8_3:-48996826 | None:intergenic |
TGGATGTGAGGACCCTTTAA+TGG | 0.244920 | 8_3:-48995524 | None:intergenic |
TCGATTTCACGTCGAAATTT+GGG | 0.247314 | 8_3:-48995150 | None:intergenic |
TGGGGATTGTAGTATTATTC+TGG | 0.273669 | 8_3:-48995131 | None:intergenic |
TCCCCAAAATATTGAAGAAT+TGG | 0.278213 | 8_3:+48996723 | Msa1292650:CDS |
GTGCTCTCTATTCCATTAGT+TGG | 0.318808 | 8_3:+48996938 | Msa1292650:CDS |
CTAGTTTGTGGTAGTTGAAT+TGG | 0.323626 | 8_3:-48995219 | None:intergenic |
CAAAATTTAAATCAGGAAAA+AGG | 0.334262 | 8_3:+48995277 | Msa1292650:CDS |
TCATGGAGATGGAGAAAATA+TGG | 0.338703 | 8_3:+48995493 | Msa1292650:CDS |
TGCTCTCTATTCCATTAGTT+GGG | 0.343239 | 8_3:+48996939 | Msa1292650:CDS |
ACCAACAAGAAGCCCCTTGC+TGG | 0.348461 | 8_3:-48996636 | None:intergenic |
TTGGAGTTCCGATTATTTGC+TGG | 0.372967 | 8_3:-48996485 | None:intergenic |
GTAGTTGATTATGACTTCTC+TGG | 0.383485 | 8_3:-48995197 | None:intergenic |
ATAAGGTTTCAGAGGATTCA+TGG | 0.385027 | 8_3:+48995476 | Msa1292650:CDS |
GGATGTGAGGACCCTTTAAT+GGG | 0.387521 | 8_3:-48995523 | None:intergenic |
TTTGGGTCAAACCCAACTAA+TGG | 0.398705 | 8_3:-48996950 | None:intergenic |
AGCTGCAACATTACCGCATT+AGG | 0.400572 | 8_3:-48996599 | None:intergenic |
ACAATAAACCAGCAAATAAT+CGG | 0.401514 | 8_3:+48996477 | Msa1292650:CDS |
AAACATGACACCTATGTTAG+AGG | 0.415313 | 8_3:+48996882 | Msa1292650:CDS |
AAATGATAATCAAGTATCAT+TGG | 0.431401 | 8_3:+48995435 | Msa1292650:CDS |
TGAACCTGTTGTTGTTCGGC+AGG | 0.436685 | 8_3:-48995102 | None:intergenic |
GCCAGCAAGGGGCTTCTTGT+TGG | 0.436694 | 8_3:+48996635 | Msa1292650:CDS |
TTTCACAAACATCATAAACT+TGG | 0.439399 | 8_3:+48996571 | Msa1292650:CDS |
ACTTATGAAGTGACATATCT+AGG | 0.442305 | 8_3:+48996443 | Msa1292650:CDS |
GAGTTTGTATCAACTGTTGA+TGG | 0.448255 | 8_3:+48996536 | Msa1292650:CDS |
AACTGCAACATCATCATGTT+AGG | 0.454150 | 8_3:-48996751 | None:intergenic |
TCTAACATAGGTGTCATGTT+TGG | 0.456315 | 8_3:-48996880 | None:intergenic |
AAACGACCAAAATTTAAATC+AGG | 0.456553 | 8_3:+48995270 | Msa1292650:CDS |
TTACCCTGCCGAACAACAAC+AGG | 0.458001 | 8_3:+48995098 | Msa1292650:CDS |
GGCTTGAACCTGTTGTTGTT+CGG | 0.469350 | 8_3:-48995106 | None:intergenic |
TAAATTTCGCTTCTGTATAC+GGG | 0.471681 | 8_3:-48996825 | None:intergenic |
GATTGTAGTATTATTCTGGT+TGG | 0.480965 | 8_3:-48995127 | None:intergenic |
TGATCAGCCAAGAGCCAGCA+AGG | 0.485384 | 8_3:+48996622 | Msa1292650:intron |
GTATCATTGGTGAGCTATGT+GGG | 0.490327 | 8_3:+48995448 | Msa1292650:CDS |
GTTGTTGTGGAACTAATTCA+TGG | 0.500678 | 8_3:-48995173 | None:intergenic |
ACTTAGTCCTTTACCTACAC+TGG | 0.501454 | 8_3:+48996687 | Msa1292650:CDS |
TGACTTCTCTGGAGTTGTTG+TGG | 0.507145 | 8_3:-48995186 | None:intergenic |
TTCACAAACATCATAAACTT+GGG | 0.528355 | 8_3:+48996572 | Msa1292650:CDS |
GCTTTGCCCAGTGTAGGTAA+AGG | 0.528650 | 8_3:-48996694 | None:intergenic |
ACTCCAATGTCGGTAGCTCT+CGG | 0.533519 | 8_3:+48996501 | Msa1292650:CDS |
TTTCAGAGGATTCATGGAGA+TGG | 0.534538 | 8_3:+48995482 | Msa1292650:CDS |
CTTAGTCCTTTACCTACACT+GGG | 0.545206 | 8_3:+48996688 | Msa1292650:CDS |
CGATTTCACGTCGAAATTTG+GGG | 0.547197 | 8_3:-48995149 | None:intergenic |
AAAGATCTAAAACTAGTTTG+TGG | 0.559260 | 8_3:-48995231 | None:intergenic |
AGTATCATTGGTGAGCTATG+TGG | 0.560291 | 8_3:+48995447 | Msa1292650:CDS |
TTAAAGGGTCCTCACATCCA+AGG | 0.572922 | 8_3:+48995527 | Msa1292650:CDS |
TTGTTTAGCAAGAAAACAAG+TGG | 0.573603 | 8_3:+48996397 | Msa1292650:CDS |
GATCAGCCAAGAGCCAGCAA+GGG | 0.580335 | 8_3:+48996623 | Msa1292650:intron |
GTACCGAGAGCTACCGACAT+TGG | 0.603992 | 8_3:-48996504 | None:intergenic |
TCAACAGTTGATACAAACTC+TGG | 0.605581 | 8_3:-48996533 | None:intergenic |
GGGTAATGAGAAATCAGAAA+CGG | 0.605841 | 8_3:-48995081 | None:intergenic |
GAACCTGTTGTTGTTCGGCA+GGG | 0.609171 | 8_3:-48995101 | None:intergenic |
AATGAGAAATCAGAAACGGC+GGG | 0.616664 | 8_3:-48995077 | None:intergenic |
AAACTTGGGTTCTCCTAATG+CGG | 0.633652 | 8_3:+48996586 | Msa1292650:CDS |
ATCAGCCAAGAGCCAGCAAG+GGG | 0.652663 | 8_3:+48996624 | Msa1292650:intron |
TATCATTGGTGAGCTATGTG+GGG | 0.653483 | 8_3:+48995449 | Msa1292650:CDS |
AATAATCGGAACTCCAATGT+CGG | 0.657205 | 8_3:+48996491 | Msa1292650:CDS |
ATCATTGGTGAGCTATGTGG+GGG | 0.659269 | 8_3:+48995450 | Msa1292650:CDS |
TAATGAGAAATCAGAAACGG+CGG | 0.677566 | 8_3:-48995078 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTAAAAAATATATATTTAT+AGG | + | chr8_3:48996082-48996101 | Msa1292650:intron | 0.0% |
!! | TTTAAAAAATATATATTTAT+AGG | + | chr8_3:48996082-48996101 | Msa1292650:intron | 0.0% |
!! | TTAATATTGAATAAATTTGT+GGG | - | chr8_3:48995895-48995914 | None:intergenic | 10.0% |
!! | AATTTATTCAATATTAACAT+TGG | + | chr8_3:48995898-48995917 | Msa1292650:intron | 10.0% |
!! | AAAAATCACTATAAATATAA+GGG | - | chr8_3:48996158-48996177 | None:intergenic | 10.0% |
!! | TAAAAATCACTATAAATATA+AGG | - | chr8_3:48996159-48996178 | None:intergenic | 10.0% |
!! | ATATAAACACATATTTATAT+AGG | - | chr8_3:48996257-48996276 | None:intergenic | 10.0% |
!! | TTAATATTGAATAAATTTGT+GGG | - | chr8_3:48995895-48995914 | None:intergenic | 10.0% |
!! | AATTTATTCAATATTAACAT+TGG | + | chr8_3:48995898-48995917 | Msa1292650:intron | 10.0% |
!! | AAAAATCACTATAAATATAA+GGG | - | chr8_3:48996158-48996177 | None:intergenic | 10.0% |
!! | TAAAAATCACTATAAATATA+AGG | - | chr8_3:48996159-48996178 | None:intergenic | 10.0% |
!! | ATATAAACACATATTTATAT+AGG | - | chr8_3:48996257-48996276 | None:intergenic | 10.0% |
!!! | TTTTTTCTATAAGAAAAGAA+AGG | - | chr8_3:48995418-48995437 | None:intergenic | 15.0% |
!! | GTTAATATTGAATAAATTTG+TGG | - | chr8_3:48995896-48995915 | None:intergenic | 15.0% |
!!! | TTTTTTCTATAAGAAAAGAA+AGG | - | chr8_3:48995418-48995437 | None:intergenic | 15.0% |
!! | GTTAATATTGAATAAATTTG+TGG | - | chr8_3:48995896-48995915 | None:intergenic | 15.0% |
!!! | CTTTTTCCTGATTTAAATTT+TGG | - | chr8_3:48995279-48995298 | None:intergenic | 20.0% |
!! | CAAAATTTAAATCAGGAAAA+AGG | + | chr8_3:48995277-48995296 | Msa1292650:CDS | 20.0% |
!!! | AAGAAAGGTAAAATGATTTT+AGG | - | chr8_3:48995403-48995422 | None:intergenic | 20.0% |
!! | AAATGATAATCAAGTATCAT+TGG | + | chr8_3:48995435-48995454 | Msa1292650:CDS | 20.0% |
!! | TGCATTAAATGAGAAAAATA+TGG | + | chr8_3:48995644-48995663 | Msa1292650:intron | 20.0% |
!! | AACAAAACAAAAAATCAAAG+AGG | - | chr8_3:48995823-48995842 | None:intergenic | 20.0% |
!! | AGGATTATAGAAAAAAGATA+GGG | - | chr8_3:48995856-48995875 | None:intergenic | 20.0% |
!! | ATGTTCCATATGAATAAATT+TGG | + | chr8_3:48995968-48995987 | Msa1292650:intron | 20.0% |
!! | ATATGTGTTTATATGACTTT+AGG | + | chr8_3:48996263-48996282 | Msa1292650:intron | 20.0% |
!!! | ATCCAATTCTTCAATATTTT+GGG | - | chr8_3:48996728-48996747 | None:intergenic | 20.0% |
!!! | AATCCAATTCTTCAATATTT+TGG | - | chr8_3:48996729-48996748 | None:intergenic | 20.0% |
!! | AGATTCATATGAAAAAACAT+TGG | - | chr8_3:48996800-48996819 | None:intergenic | 20.0% |
!!! | CTTTTTCCTGATTTAAATTT+TGG | - | chr8_3:48995279-48995298 | None:intergenic | 20.0% |
!! | CAAAATTTAAATCAGGAAAA+AGG | + | chr8_3:48995277-48995296 | Msa1292650:CDS | 20.0% |
!!! | AAGAAAGGTAAAATGATTTT+AGG | - | chr8_3:48995403-48995422 | None:intergenic | 20.0% |
!! | AAATGATAATCAAGTATCAT+TGG | + | chr8_3:48995435-48995454 | Msa1292650:CDS | 20.0% |
!! | TGCATTAAATGAGAAAAATA+TGG | + | chr8_3:48995644-48995663 | Msa1292650:intron | 20.0% |
!! | AACAAAACAAAAAATCAAAG+AGG | - | chr8_3:48995823-48995842 | None:intergenic | 20.0% |
!! | AGGATTATAGAAAAAAGATA+GGG | - | chr8_3:48995856-48995875 | None:intergenic | 20.0% |
!! | ATGTTCCATATGAATAAATT+TGG | + | chr8_3:48995968-48995987 | Msa1292650:intron | 20.0% |
!! | ATATGTGTTTATATGACTTT+AGG | + | chr8_3:48996263-48996282 | Msa1292650:intron | 20.0% |
!!! | ATCCAATTCTTCAATATTTT+GGG | - | chr8_3:48996728-48996747 | None:intergenic | 20.0% |
!!! | AATCCAATTCTTCAATATTT+TGG | - | chr8_3:48996729-48996748 | None:intergenic | 20.0% |
!! | AGATTCATATGAAAAAACAT+TGG | - | chr8_3:48996800-48996819 | None:intergenic | 20.0% |
!! | AAAGATCTAAAACTAGTTTG+TGG | - | chr8_3:48995234-48995253 | None:intergenic | 25.0% |
!!! | GATTTAAATTTTGGTCGTTT+TGG | - | chr8_3:48995270-48995289 | None:intergenic | 25.0% |
! | AAACGACCAAAATTTAAATC+AGG | + | chr8_3:48995270-48995289 | Msa1292650:CDS | 25.0% |
!!! | TAAAATGATTTTAGGTCACA+AGG | - | chr8_3:48995395-48995414 | None:intergenic | 25.0% |
! | TTTGAATGCTTAAAAAACCT+TGG | - | chr8_3:48995547-48995566 | None:intergenic | 25.0% |
! | CAGGATTATAGAAAAAAGAT+AGG | - | chr8_3:48995857-48995876 | None:intergenic | 25.0% |
!!! | CTATCTTTTTTCTATAATCC+TGG | + | chr8_3:48995855-48995874 | Msa1292650:intron | 25.0% |
! | AACAAATCTTTCACTTATTG+TGG | + | chr8_3:48996193-48996212 | Msa1292650:intron | 25.0% |
! | CAAGTGGAAAAAATAAAAGA+TGG | + | chr8_3:48996413-48996432 | Msa1292650:CDS | 25.0% |
! | ACAATAAACCAGCAAATAAT+CGG | + | chr8_3:48996477-48996496 | Msa1292650:CDS | 25.0% |
! | TTTCACAAACATCATAAACT+TGG | + | chr8_3:48996571-48996590 | Msa1292650:CDS | 25.0% |
! | TTCACAAACATCATAAACTT+GGG | + | chr8_3:48996572-48996591 | Msa1292650:CDS | 25.0% |
!!! | TAAGTTCAGTTTTTAGATCA+GGG | - | chr8_3:48996672-48996691 | None:intergenic | 25.0% |
!! | TCCAATTCTTCAATATTTTG+GGG | - | chr8_3:48996727-48996746 | None:intergenic | 25.0% |
! | ATAAATTTCGCTTCTGTATA+CGG | - | chr8_3:48996829-48996848 | None:intergenic | 25.0% |
! | AAAAAGAATTCCTCTAACAT+AGG | - | chr8_3:48996895-48996914 | None:intergenic | 25.0% |
!! | TATGTTAGAGGAATTCTTTT+TGG | + | chr8_3:48996894-48996913 | Msa1292650:CDS | 25.0% |
!! | AAAGATCTAAAACTAGTTTG+TGG | - | chr8_3:48995234-48995253 | None:intergenic | 25.0% |
!!! | GATTTAAATTTTGGTCGTTT+TGG | - | chr8_3:48995270-48995289 | None:intergenic | 25.0% |
! | AAACGACCAAAATTTAAATC+AGG | + | chr8_3:48995270-48995289 | Msa1292650:CDS | 25.0% |
!!! | TAAAATGATTTTAGGTCACA+AGG | - | chr8_3:48995395-48995414 | None:intergenic | 25.0% |
! | TTTGAATGCTTAAAAAACCT+TGG | - | chr8_3:48995547-48995566 | None:intergenic | 25.0% |
! | CAGGATTATAGAAAAAAGAT+AGG | - | chr8_3:48995857-48995876 | None:intergenic | 25.0% |
!!! | CTATCTTTTTTCTATAATCC+TGG | + | chr8_3:48995855-48995874 | Msa1292650:intron | 25.0% |
! | AACAAATCTTTCACTTATTG+TGG | + | chr8_3:48996193-48996212 | Msa1292650:intron | 25.0% |
! | CAAGTGGAAAAAATAAAAGA+TGG | + | chr8_3:48996413-48996432 | Msa1292650:CDS | 25.0% |
! | ACAATAAACCAGCAAATAAT+CGG | + | chr8_3:48996477-48996496 | Msa1292650:CDS | 25.0% |
! | TTTCACAAACATCATAAACT+TGG | + | chr8_3:48996571-48996590 | Msa1292650:CDS | 25.0% |
! | TTCACAAACATCATAAACTT+GGG | + | chr8_3:48996572-48996591 | Msa1292650:CDS | 25.0% |
!!! | TAAGTTCAGTTTTTAGATCA+GGG | - | chr8_3:48996672-48996691 | None:intergenic | 25.0% |
!! | TCCAATTCTTCAATATTTTG+GGG | - | chr8_3:48996727-48996746 | None:intergenic | 25.0% |
! | ATAAATTTCGCTTCTGTATA+CGG | - | chr8_3:48996829-48996848 | None:intergenic | 25.0% |
! | AAAAAGAATTCCTCTAACAT+AGG | - | chr8_3:48996895-48996914 | None:intergenic | 25.0% |
!! | TATGTTAGAGGAATTCTTTT+TGG | + | chr8_3:48996894-48996913 | Msa1292650:CDS | 25.0% |
GATTGTAGTATTATTCTGGT+TGG | - | chr8_3:48995130-48995149 | None:intergenic | 30.0% | |
TATGGACAAAAACCCATTAA+AGG | + | chr8_3:48995511-48995530 | Msa1292650:CDS | 30.0% | |
ATGGACAAAAACCCATTAAA+GGG | + | chr8_3:48995512-48995531 | Msa1292650:CDS | 30.0% | |
AACCACTAATTAAAACCCTT+GGG | - | chr8_3:48995609-48995628 | None:intergenic | 30.0% | |
TTAATGCAACTCTTTGCAAT+GGG | - | chr8_3:48995632-48995651 | None:intergenic | 30.0% | |
TTTAATGCAACTCTTTGCAA+TGG | - | chr8_3:48995633-48995652 | None:intergenic | 30.0% | |
TCCATATGAATAAATTTGGC+AGG | + | chr8_3:48995972-48995991 | Msa1292650:intron | 30.0% | |
TCCTGCCAAATTTATTCATA+TGG | - | chr8_3:48995976-48995995 | None:intergenic | 30.0% | |
AACAGAGACCGAAATAAAAA+AGG | + | chr8_3:48996009-48996028 | Msa1292650:intron | 30.0% | |
ACAGAGACCGAAATAAAAAA+GGG | + | chr8_3:48996010-48996029 | Msa1292650:intron | 30.0% | |
!!! | TATACCCCCCTTTTTTATTT+CGG | - | chr8_3:48996020-48996039 | None:intergenic | 30.0% |
ATCTTTCACTTATTGTGGTA+CGG | + | chr8_3:48996198-48996217 | Msa1292650:intron | 30.0% | |
! | TTTTCTTGCTAAACAATCAC+TGG | - | chr8_3:48996393-48996412 | None:intergenic | 30.0% |
TTGTTTAGCAAGAAAACAAG+TGG | + | chr8_3:48996397-48996416 | Msa1292650:CDS | 30.0% | |
ACTTATGAAGTGACATATCT+AGG | + | chr8_3:48996443-48996462 | Msa1292650:CDS | 30.0% | |
!! | CTAAGTTCAGTTTTTAGATC+AGG | - | chr8_3:48996673-48996692 | None:intergenic | 30.0% |
TCCCCAAAATATTGAAGAAT+TGG | + | chr8_3:48996723-48996742 | Msa1292650:CDS | 30.0% | |
TAAATTTCGCTTCTGTATAC+GGG | - | chr8_3:48996828-48996847 | None:intergenic | 30.0% | |
GATTGTAGTATTATTCTGGT+TGG | - | chr8_3:48995130-48995149 | None:intergenic | 30.0% | |
TATGGACAAAAACCCATTAA+AGG | + | chr8_3:48995511-48995530 | Msa1292650:CDS | 30.0% | |
ATGGACAAAAACCCATTAAA+GGG | + | chr8_3:48995512-48995531 | Msa1292650:CDS | 30.0% | |
AACCACTAATTAAAACCCTT+GGG | - | chr8_3:48995609-48995628 | None:intergenic | 30.0% | |
TTAATGCAACTCTTTGCAAT+GGG | - | chr8_3:48995632-48995651 | None:intergenic | 30.0% | |
TTTAATGCAACTCTTTGCAA+TGG | - | chr8_3:48995633-48995652 | None:intergenic | 30.0% | |
TCCATATGAATAAATTTGGC+AGG | + | chr8_3:48995972-48995991 | Msa1292650:intron | 30.0% | |
TCCTGCCAAATTTATTCATA+TGG | - | chr8_3:48995976-48995995 | None:intergenic | 30.0% | |
AACAGAGACCGAAATAAAAA+AGG | + | chr8_3:48996009-48996028 | Msa1292650:intron | 30.0% | |
ACAGAGACCGAAATAAAAAA+GGG | + | chr8_3:48996010-48996029 | Msa1292650:intron | 30.0% | |
!!! | TATACCCCCCTTTTTTATTT+CGG | - | chr8_3:48996020-48996039 | None:intergenic | 30.0% |
ATCTTTCACTTATTGTGGTA+CGG | + | chr8_3:48996198-48996217 | Msa1292650:intron | 30.0% | |
! | TTTTCTTGCTAAACAATCAC+TGG | - | chr8_3:48996393-48996412 | None:intergenic | 30.0% |
TTGTTTAGCAAGAAAACAAG+TGG | + | chr8_3:48996397-48996416 | Msa1292650:CDS | 30.0% | |
ACTTATGAAGTGACATATCT+AGG | + | chr8_3:48996443-48996462 | Msa1292650:CDS | 30.0% | |
!! | CTAAGTTCAGTTTTTAGATC+AGG | - | chr8_3:48996673-48996692 | None:intergenic | 30.0% |
TCCCCAAAATATTGAAGAAT+TGG | + | chr8_3:48996723-48996742 | Msa1292650:CDS | 30.0% | |
TAAATTTCGCTTCTGTATAC+GGG | - | chr8_3:48996828-48996847 | None:intergenic | 30.0% | |
TAATGAGAAATCAGAAACGG+CGG | - | chr8_3:48995081-48995100 | None:intergenic | 35.0% | |
GGGTAATGAGAAATCAGAAA+CGG | - | chr8_3:48995084-48995103 | None:intergenic | 35.0% | |
TGGGGATTGTAGTATTATTC+TGG | - | chr8_3:48995134-48995153 | None:intergenic | 35.0% | |
TCGATTTCACGTCGAAATTT+GGG | - | chr8_3:48995153-48995172 | None:intergenic | 35.0% | |
GTTGTTGTGGAACTAATTCA+TGG | - | chr8_3:48995176-48995195 | None:intergenic | 35.0% | |
GTAGTTGATTATGACTTCTC+TGG | - | chr8_3:48995200-48995219 | None:intergenic | 35.0% | |
! | CTAGTTTGTGGTAGTTGAAT+TGG | - | chr8_3:48995222-48995241 | None:intergenic | 35.0% |
!!! | GGTCGTTTTGGTTTTGTATT+TGG | - | chr8_3:48995258-48995277 | None:intergenic | 35.0% |
ATAAGGTTTCAGAGGATTCA+TGG | + | chr8_3:48995476-48995495 | Msa1292650:CDS | 35.0% | |
TCATGGAGATGGAGAAAATA+TGG | + | chr8_3:48995493-48995512 | Msa1292650:CDS | 35.0% | |
CTTAAAAAACCTTGGATGTG+AGG | - | chr8_3:48995539-48995558 | None:intergenic | 35.0% | |
GAACCACTAATTAAAACCCT+TGG | - | chr8_3:48995610-48995629 | None:intergenic | 35.0% | |
TGGGAACTAAAAGAAATACC+AGG | - | chr8_3:48995876-48995895 | None:intergenic | 35.0% | |
CAGAGACCGAAATAAAAAAG+GGG | + | chr8_3:48996011-48996030 | Msa1292650:intron | 35.0% | |
AGAGACCGAAATAAAAAAGG+GGG | + | chr8_3:48996012-48996031 | Msa1292650:intron | 35.0% | |
AATAATCGGAACTCCAATGT+CGG | + | chr8_3:48996491-48996510 | Msa1292650:CDS | 35.0% | |
! | TCAACAGTTGATACAAACTC+TGG | - | chr8_3:48996536-48996555 | None:intergenic | 35.0% |
GAGTTTGTATCAACTGTTGA+TGG | + | chr8_3:48996536-48996555 | Msa1292650:CDS | 35.0% | |
AACTGCAACATCATCATGTT+AGG | - | chr8_3:48996754-48996773 | None:intergenic | 35.0% | |
! | TCTAACATAGGTGTCATGTT+TGG | - | chr8_3:48996883-48996902 | None:intergenic | 35.0% |
AAACATGACACCTATGTTAG+AGG | + | chr8_3:48996882-48996901 | Msa1292650:CDS | 35.0% | |
TGCTCTCTATTCCATTAGTT+GGG | + | chr8_3:48996939-48996958 | Msa1292650:CDS | 35.0% | |
TAATGAGAAATCAGAAACGG+CGG | - | chr8_3:48995081-48995100 | None:intergenic | 35.0% | |
GGGTAATGAGAAATCAGAAA+CGG | - | chr8_3:48995084-48995103 | None:intergenic | 35.0% | |
TGGGGATTGTAGTATTATTC+TGG | - | chr8_3:48995134-48995153 | None:intergenic | 35.0% | |
TCGATTTCACGTCGAAATTT+GGG | - | chr8_3:48995153-48995172 | None:intergenic | 35.0% | |
GTTGTTGTGGAACTAATTCA+TGG | - | chr8_3:48995176-48995195 | None:intergenic | 35.0% | |
GTAGTTGATTATGACTTCTC+TGG | - | chr8_3:48995200-48995219 | None:intergenic | 35.0% | |
! | CTAGTTTGTGGTAGTTGAAT+TGG | - | chr8_3:48995222-48995241 | None:intergenic | 35.0% |
!!! | GGTCGTTTTGGTTTTGTATT+TGG | - | chr8_3:48995258-48995277 | None:intergenic | 35.0% |
ATAAGGTTTCAGAGGATTCA+TGG | + | chr8_3:48995476-48995495 | Msa1292650:CDS | 35.0% | |
TCATGGAGATGGAGAAAATA+TGG | + | chr8_3:48995493-48995512 | Msa1292650:CDS | 35.0% | |
CTTAAAAAACCTTGGATGTG+AGG | - | chr8_3:48995539-48995558 | None:intergenic | 35.0% | |
GAACCACTAATTAAAACCCT+TGG | - | chr8_3:48995610-48995629 | None:intergenic | 35.0% | |
TGGGAACTAAAAGAAATACC+AGG | - | chr8_3:48995876-48995895 | None:intergenic | 35.0% | |
CAGAGACCGAAATAAAAAAG+GGG | + | chr8_3:48996011-48996030 | Msa1292650:intron | 35.0% | |
AGAGACCGAAATAAAAAAGG+GGG | + | chr8_3:48996012-48996031 | Msa1292650:intron | 35.0% | |
AATAATCGGAACTCCAATGT+CGG | + | chr8_3:48996491-48996510 | Msa1292650:CDS | 35.0% | |
! | TCAACAGTTGATACAAACTC+TGG | - | chr8_3:48996536-48996555 | None:intergenic | 35.0% |
GAGTTTGTATCAACTGTTGA+TGG | + | chr8_3:48996536-48996555 | Msa1292650:CDS | 35.0% | |
AACTGCAACATCATCATGTT+AGG | - | chr8_3:48996754-48996773 | None:intergenic | 35.0% | |
! | TCTAACATAGGTGTCATGTT+TGG | - | chr8_3:48996883-48996902 | None:intergenic | 35.0% |
AAACATGACACCTATGTTAG+AGG | + | chr8_3:48996882-48996901 | Msa1292650:CDS | 35.0% | |
TGCTCTCTATTCCATTAGTT+GGG | + | chr8_3:48996939-48996958 | Msa1292650:CDS | 35.0% | |
AATGAGAAATCAGAAACGGC+GGG | - | chr8_3:48995080-48995099 | None:intergenic | 40.0% | |
CGATTTCACGTCGAAATTTG+GGG | - | chr8_3:48995152-48995171 | None:intergenic | 40.0% | |
! | GTCGATTTCACGTCGAAATT+TGG | - | chr8_3:48995154-48995173 | None:intergenic | 40.0% |
AGTATCATTGGTGAGCTATG+TGG | + | chr8_3:48995447-48995466 | Msa1292650:CDS | 40.0% | |
GTATCATTGGTGAGCTATGT+GGG | + | chr8_3:48995448-48995467 | Msa1292650:CDS | 40.0% | |
TATCATTGGTGAGCTATGTG+GGG | + | chr8_3:48995449-48995468 | Msa1292650:CDS | 40.0% | |
TTTCAGAGGATTCATGGAGA+TGG | + | chr8_3:48995482-48995501 | Msa1292650:CDS | 40.0% | |
CTAATTAAAACCCTTGGGTG+TGG | - | chr8_3:48995604-48995623 | None:intergenic | 40.0% | |
!!! | CACCCAAGGGTTTTAATTAG+TGG | + | chr8_3:48995604-48995623 | Msa1292650:intron | 40.0% |
GAGACCGAAATAAAAAAGGG+GGG | + | chr8_3:48996013-48996032 | Msa1292650:intron | 40.0% | |
TTGGAGTTCCGATTATTTGC+TGG | - | chr8_3:48996488-48996507 | None:intergenic | 40.0% | |
AAACTTGGGTTCTCCTAATG+CGG | + | chr8_3:48996586-48996605 | Msa1292650:CDS | 40.0% | |
ACTTAGTCCTTTACCTACAC+TGG | + | chr8_3:48996687-48996706 | Msa1292650:CDS | 40.0% | |
CTTAGTCCTTTACCTACACT+GGG | + | chr8_3:48996688-48996707 | Msa1292650:CDS | 40.0% | |
GTGCTCTCTATTCCATTAGT+TGG | + | chr8_3:48996938-48996957 | Msa1292650:CDS | 40.0% | |
AATGAGAAATCAGAAACGGC+GGG | - | chr8_3:48995080-48995099 | None:intergenic | 40.0% | |
CGATTTCACGTCGAAATTTG+GGG | - | chr8_3:48995152-48995171 | None:intergenic | 40.0% | |
! | GTCGATTTCACGTCGAAATT+TGG | - | chr8_3:48995154-48995173 | None:intergenic | 40.0% |
AGTATCATTGGTGAGCTATG+TGG | + | chr8_3:48995447-48995466 | Msa1292650:CDS | 40.0% | |
GTATCATTGGTGAGCTATGT+GGG | + | chr8_3:48995448-48995467 | Msa1292650:CDS | 40.0% | |
TATCATTGGTGAGCTATGTG+GGG | + | chr8_3:48995449-48995468 | Msa1292650:CDS | 40.0% | |
TTTCAGAGGATTCATGGAGA+TGG | + | chr8_3:48995482-48995501 | Msa1292650:CDS | 40.0% | |
CTAATTAAAACCCTTGGGTG+TGG | - | chr8_3:48995604-48995623 | None:intergenic | 40.0% | |
!!! | CACCCAAGGGTTTTAATTAG+TGG | + | chr8_3:48995604-48995623 | Msa1292650:intron | 40.0% |
GAGACCGAAATAAAAAAGGG+GGG | + | chr8_3:48996013-48996032 | Msa1292650:intron | 40.0% | |
TTGGAGTTCCGATTATTTGC+TGG | - | chr8_3:48996488-48996507 | None:intergenic | 40.0% | |
AAACTTGGGTTCTCCTAATG+CGG | + | chr8_3:48996586-48996605 | Msa1292650:CDS | 40.0% | |
ACTTAGTCCTTTACCTACAC+TGG | + | chr8_3:48996687-48996706 | Msa1292650:CDS | 40.0% | |
CTTAGTCCTTTACCTACACT+GGG | + | chr8_3:48996688-48996707 | Msa1292650:CDS | 40.0% | |
GTGCTCTCTATTCCATTAGT+TGG | + | chr8_3:48996938-48996957 | Msa1292650:CDS | 40.0% | |
! | GGCTTGAACCTGTTGTTGTT+CGG | - | chr8_3:48995109-48995128 | None:intergenic | 45.0% |
!! | TGACTTCTCTGGAGTTGTTG+TGG | - | chr8_3:48995189-48995208 | None:intergenic | 45.0% |
ATCATTGGTGAGCTATGTGG+GGG | + | chr8_3:48995450-48995469 | Msa1292650:CDS | 45.0% | |
GGATGTGAGGACCCTTTAAT+GGG | - | chr8_3:48995526-48995545 | None:intergenic | 45.0% | |
TGGATGTGAGGACCCTTTAA+TGG | - | chr8_3:48995527-48995546 | None:intergenic | 45.0% | |
TTAAAGGGTCCTCACATCCA+AGG | + | chr8_3:48995527-48995546 | Msa1292650:CDS | 45.0% | |
TAATACACACACCACACCCA+AGG | + | chr8_3:48995590-48995609 | Msa1292650:intron | 45.0% | |
AATACACACACCACACCCAA+GGG | + | chr8_3:48995591-48995610 | Msa1292650:intron | 45.0% | |
CACTTATTGTGGTACGGAGT+TGG | + | chr8_3:48996204-48996223 | Msa1292650:intron | 45.0% | |
AGCTGCAACATTACCGCATT+AGG | - | chr8_3:48996602-48996621 | None:intergenic | 45.0% | |
! | GATTTTGCTTTGCCCAGTGT+AGG | - | chr8_3:48996703-48996722 | None:intergenic | 45.0% |
! | GGCTTGAACCTGTTGTTGTT+CGG | - | chr8_3:48995109-48995128 | None:intergenic | 45.0% |
!! | TGACTTCTCTGGAGTTGTTG+TGG | - | chr8_3:48995189-48995208 | None:intergenic | 45.0% |
ATCATTGGTGAGCTATGTGG+GGG | + | chr8_3:48995450-48995469 | Msa1292650:CDS | 45.0% | |
GGATGTGAGGACCCTTTAAT+GGG | - | chr8_3:48995526-48995545 | None:intergenic | 45.0% | |
TGGATGTGAGGACCCTTTAA+TGG | - | chr8_3:48995527-48995546 | None:intergenic | 45.0% | |
TTAAAGGGTCCTCACATCCA+AGG | + | chr8_3:48995527-48995546 | Msa1292650:CDS | 45.0% | |
TAATACACACACCACACCCA+AGG | + | chr8_3:48995590-48995609 | Msa1292650:intron | 45.0% | |
AATACACACACCACACCCAA+GGG | + | chr8_3:48995591-48995610 | Msa1292650:intron | 45.0% | |
CACTTATTGTGGTACGGAGT+TGG | + | chr8_3:48996204-48996223 | Msa1292650:intron | 45.0% | |
AGCTGCAACATTACCGCATT+AGG | - | chr8_3:48996602-48996621 | None:intergenic | 45.0% | |
! | GATTTTGCTTTGCCCAGTGT+AGG | - | chr8_3:48996703-48996722 | None:intergenic | 45.0% |
!! | TGTAAAATATATTAAATAAT+AGG | - | chr8_3:48995316-48995335 | None:intergenic | 5.0% |
!! | TGTAAAATATATTAAATAAT+AGG | - | chr8_3:48995316-48995335 | None:intergenic | 5.0% |
TTACCCTGCCGAACAACAAC+AGG | + | chr8_3:48995098-48995117 | Msa1292650:CDS | 50.0% | |
! | GAACCTGTTGTTGTTCGGCA+GGG | - | chr8_3:48995104-48995123 | None:intergenic | 50.0% |
! | TGAACCTGTTGTTGTTCGGC+AGG | - | chr8_3:48995105-48995124 | None:intergenic | 50.0% |
ACTCCAATGTCGGTAGCTCT+CGG | + | chr8_3:48996501-48996520 | Msa1292650:CDS | 50.0% | |
GCTTTGCCCAGTGTAGGTAA+AGG | - | chr8_3:48996697-48996716 | None:intergenic | 50.0% | |
TTACCCTGCCGAACAACAAC+AGG | + | chr8_3:48995098-48995117 | Msa1292650:CDS | 50.0% | |
! | GAACCTGTTGTTGTTCGGCA+GGG | - | chr8_3:48995104-48995123 | None:intergenic | 50.0% |
! | TGAACCTGTTGTTGTTCGGC+AGG | - | chr8_3:48995105-48995124 | None:intergenic | 50.0% |
ACTCCAATGTCGGTAGCTCT+CGG | + | chr8_3:48996501-48996520 | Msa1292650:CDS | 50.0% | |
GCTTTGCCCAGTGTAGGTAA+AGG | - | chr8_3:48996697-48996716 | None:intergenic | 50.0% | |
GAGCTATGTGGGGGCAGATA+AGG | + | chr8_3:48995459-48995478 | Msa1292650:CDS | 55.0% | |
GGGGGCAGATAAGGTTTCAG+AGG | + | chr8_3:48995468-48995487 | Msa1292650:CDS | 55.0% | |
GTACCGAGAGCTACCGACAT+TGG | - | chr8_3:48996507-48996526 | None:intergenic | 55.0% | |
TGATCAGCCAAGAGCCAGCA+AGG | + | chr8_3:48996622-48996641 | Msa1292650:intron | 55.0% | |
GATCAGCCAAGAGCCAGCAA+GGG | + | chr8_3:48996623-48996642 | Msa1292650:intron | 55.0% | |
ATCAGCCAAGAGCCAGCAAG+GGG | + | chr8_3:48996624-48996643 | Msa1292650:intron | 55.0% | |
ACCAACAAGAAGCCCCTTGC+TGG | - | chr8_3:48996639-48996658 | None:intergenic | 55.0% | |
GAGCTATGTGGGGGCAGATA+AGG | + | chr8_3:48995459-48995478 | Msa1292650:CDS | 55.0% | |
GGGGGCAGATAAGGTTTCAG+AGG | + | chr8_3:48995468-48995487 | Msa1292650:CDS | 55.0% | |
GTACCGAGAGCTACCGACAT+TGG | - | chr8_3:48996507-48996526 | None:intergenic | 55.0% | |
TGATCAGCCAAGAGCCAGCA+AGG | + | chr8_3:48996622-48996641 | Msa1292650:intron | 55.0% | |
GATCAGCCAAGAGCCAGCAA+GGG | + | chr8_3:48996623-48996642 | Msa1292650:intron | 55.0% | |
ATCAGCCAAGAGCCAGCAAG+GGG | + | chr8_3:48996624-48996643 | Msa1292650:intron | 55.0% | |
ACCAACAAGAAGCCCCTTGC+TGG | - | chr8_3:48996639-48996658 | None:intergenic | 55.0% | |
!! | AGAAGCCCCTTGCTGGCTCT+TGG | - | chr8_3:48996632-48996651 | None:intergenic | 60.0% |
GCCAGCAAGGGGCTTCTTGT+TGG | + | chr8_3:48996635-48996654 | Msa1292650:CDS | 60.0% | |
!! | AGAAGCCCCTTGCTGGCTCT+TGG | - | chr8_3:48996632-48996651 | None:intergenic | 60.0% |
GCCAGCAAGGGGCTTCTTGT+TGG | + | chr8_3:48996635-48996654 | Msa1292650:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 48995059 | 48996966 | 48995059 | ID=Msa1292650;Name=Msa1292650 |
chr8_3 | mRNA | 48995059 | 48996966 | 48995059 | ID=Msa1292650-mRNA-1;Parent=Msa1292650;Name=Msa1292650-mRNA-1;_AED=0.25;_eAED=0.30;_QI=0|0|0|1|0.5|0.2|5|0|307 |
chr8_3 | exon | 48995059 | 48995119 | 48995059 | ID=Msa1292650-mRNA-1:exon:13624;Parent=Msa1292650-mRNA-1 |
chr8_3 | exon | 48995127 | 48995298 | 48995127 | ID=Msa1292650-mRNA-1:exon:13625;Parent=Msa1292650-mRNA-1 |
chr8_3 | exon | 48995432 | 48995548 | 48995432 | ID=Msa1292650-mRNA-1:exon:13626;Parent=Msa1292650-mRNA-1 |
chr8_3 | exon | 48996367 | 48996607 | 48996367 | ID=Msa1292650-mRNA-1:exon:13627;Parent=Msa1292650-mRNA-1 |
chr8_3 | exon | 48996634 | 48996966 | 48996634 | ID=Msa1292650-mRNA-1:exon:13628;Parent=Msa1292650-mRNA-1 |
chr8_3 | CDS | 48995059 | 48995119 | 48995059 | ID=Msa1292650-mRNA-1:cds;Parent=Msa1292650-mRNA-1 |
chr8_3 | CDS | 48995127 | 48995298 | 48995127 | ID=Msa1292650-mRNA-1:cds;Parent=Msa1292650-mRNA-1 |
chr8_3 | CDS | 48995432 | 48995548 | 48995432 | ID=Msa1292650-mRNA-1:cds;Parent=Msa1292650-mRNA-1 |
chr8_3 | CDS | 48996367 | 48996607 | 48996367 | ID=Msa1292650-mRNA-1:cds;Parent=Msa1292650-mRNA-1 |
chr8_3 | CDS | 48996634 | 48996966 | 48996634 | ID=Msa1292650-mRNA-1:cds;Parent=Msa1292650-mRNA-1 |
Gene Sequence |
Protein sequence |