AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1295740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1295740 MtrunA17_Chr8g0373331 75.253 198 20 3 6 191 148 328 5.81e-95 290
Msa1295740 MtrunA17_Chr8g0373331 45.217 115 54 4 351 457 234 347 3.75e-19 88.6
Msa1295740 MtrunA17_Chr8g0373331 34.884 172 83 5 198 351 1 161 4.35e-18 85.5
Msa1295740 MtrunA17_Chr8g0373341 49.536 323 97 6 198 456 1 321 2.39e-88 272
Msa1295740 MtrunA17_Chr8g0373341 51.402 107 47 3 89 191 198 303 2.79e-19 88.6
Msa1295740 MtrunA17_Chr8g0373001 62.626 198 61 5 4 190 189 384 6.09e-69 225
Msa1295740 MtrunA17_Chr8g0373001 48.039 204 56 6 198 351 1 204 1.16e-42 155
Msa1295740 MtrunA17_Chr8g0373001 47.244 127 46 2 349 455 277 402 2.20e-24 104
Msa1295740 MtrunA17_Chr5g0404321 52.500 200 80 6 4 190 191 388 9.44e-52 180
Msa1295740 MtrunA17_Chr5g0404321 42.029 207 66 6 198 351 1 206 1.36e-35 136
Msa1295740 MtrunA17_Chr5g0404321 53.846 91 41 1 365 455 317 406 3.79e-21 95.1
Msa1295740 MtrunA17_Chr8g0373361 53.571 196 82 4 4 191 191 385 1.81e-49 174
Msa1295740 MtrunA17_Chr8g0373361 47.115 208 62 7 190 351 1 206 2.66e-40 149
Msa1295740 MtrunA17_Chr8g0373351 46.766 201 66 7 4 190 93 266 1.08e-38 142
Msa1295740 MtrunA17_Chr8g0373351 44.348 115 56 5 341 455 178 284 3.99e-15 75.9
Msa1295740 MtrunA17_Chr1g0155301 38.693 199 99 7 4 190 207 394 3.24e-26 110
Msa1295740 MtrunA17_Chr1g0155301 34.685 222 77 5 198 351 1 222 5.01e-22 97.8
Msa1295740 MtrunA17_Chr1g0155301 52.326 86 40 1 370 455 328 412 2.79e-17 83.6
Msa1295740 MtrunA17_Chr2g0286441 39.500 200 99 9 4 190 175 365 1.28e-24 105
Msa1295740 MtrunA17_Chr2g0286441 29.949 197 93 5 210 361 4 200 1.51e-17 84.3
Msa1295740 MtrunA17_Chr2g0286441 34.821 112 70 2 344 455 275 383 6.93e-12 67.0
Msa1295740 MtrunA17_Chr2g0278511 35.714 210 111 9 4 190 191 399 2.41e-23 102
Msa1295740 MtrunA17_Chr2g0278511 42.105 95 48 2 367 455 324 417 1.48e-12 69.3
Msa1295740 MtrunA17_Chr1g0201891 35.000 220 104 11 4 190 190 403 8.08e-23 100
Msa1295740 MtrunA17_Chr1g0201891 39.216 102 49 3 366 455 321 421 3.70e-11 65.1
Msa1295740 MtrunA17_Chr2g0315641 34.896 192 92 7 5 190 179 343 3.52e-19 89.0
Msa1295740 MtrunA17_Chr2g0315641 46.988 83 43 1 373 455 280 361 3.78e-13 70.9
Msa1295740 MtrunA17_Chr1g0196071 36.683 199 104 10 4 190 186 374 8.21e-18 85.1
Msa1295740 MtrunA17_Chr1g0196071 45.361 97 49 3 359 455 300 392 1.34e-14 75.5
Msa1295740 MtrunA17_Chr1g0156151 64.815 54 16 1 301 351 153 206 5.57e-13 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1295740 AT2G18280.2 41.753 194 94 8 4 190 184 365 9.08e-27 111
Msa1295740 AT2G18280.2 35.814 215 79 7 198 360 1 208 7.12e-24 103
Msa1295740 AT2G18280.2 40.541 111 61 2 349 455 274 383 9.82e-16 79.3
Msa1295740 AT2G18280.1 41.753 194 94 8 4 190 184 365 9.08e-27 111
Msa1295740 AT2G18280.1 35.814 215 79 7 198 360 1 208 7.12e-24 103
Msa1295740 AT2G18280.1 40.541 111 61 2 349 455 274 383 9.82e-16 79.3
Msa1295740 AT2G47900.2 31.220 205 91 4 198 352 1 205 3.16e-23 101
Msa1295740 AT2G47900.2 37.811 201 100 8 4 190 189 378 1.17e-20 94.4
Msa1295740 AT2G47900.2 40.000 100 57 3 356 455 300 396 1.02e-11 67.0
Msa1295740 AT2G47900.1 31.220 205 91 4 198 352 1 205 3.16e-23 101
Msa1295740 AT2G47900.1 37.811 201 100 8 4 190 189 378 1.17e-20 94.4
Msa1295740 AT2G47900.1 40.000 100 57 3 356 455 300 396 1.02e-11 67.0
Msa1295740 AT2G47900.3 31.068 206 91 5 198 352 1 206 5.26e-22 98.2
Msa1295740 AT2G47900.3 37.811 201 100 8 4 190 190 379 1.03e-20 94.4
Msa1295740 AT2G47900.3 40.000 100 57 3 356 455 301 397 9.85e-12 67.0
Msa1295740 AT1G47270.3 32.474 194 76 4 227 365 17 210 1.35e-21 96.7
Msa1295740 AT1G47270.3 37.624 202 89 9 4 190 181 360 2.48e-19 90.1
Msa1295740 AT1G47270.3 47.191 89 43 2 370 455 291 378 5.48e-15 77.0
Msa1295740 AT1G47270.1 30.493 223 92 5 206 365 13 235 1.81e-21 96.7
Msa1295740 AT1G47270.1 37.624 202 89 9 4 190 206 385 2.79e-19 90.1
Msa1295740 AT1G47270.1 47.191 89 43 2 370 455 316 403 5.54e-15 77.0
Msa1295740 AT1G47270.2 32.474 194 76 4 227 365 41 234 1.86e-21 96.7
Msa1295740 AT1G47270.2 37.624 202 89 9 4 190 205 384 2.93e-19 90.1
Msa1295740 AT1G47270.2 47.191 89 43 2 370 455 315 402 5.66e-15 77.0
Msa1295740 AT1G25280.3 33.778 225 108 10 4 190 18 239 2.22e-20 90.9
Msa1295740 AT1G25280.3 41.905 105 41 3 366 455 158 257 1.81e-13 70.9
Msa1295740 AT1G25280.2 33.778 225 108 10 4 190 18 239 2.22e-20 90.9
Msa1295740 AT1G25280.2 41.905 105 41 3 366 455 158 257 1.81e-13 70.9
Msa1295740 AT1G76900.2 33.473 239 102 13 4 190 194 427 4.67e-20 92.8
Msa1295740 AT1G76900.1 33.473 239 102 13 4 190 194 427 4.67e-20 92.8
Msa1295740 AT1G76900.3 33.473 239 102 13 4 190 194 427 4.67e-20 92.8
Msa1295740 AT1G25280.1 33.778 225 108 10 4 190 196 417 1.17e-19 91.7
Msa1295740 AT1G25280.1 29.858 211 91 5 198 351 1 211 3.12e-16 81.3
Msa1295740 AT1G25280.1 41.905 105 41 3 366 455 336 435 6.75e-13 70.9
Msa1295740 AT1G43640.2 34.545 220 101 14 4 190 126 335 2.54e-19 89.7
Msa1295740 AT1G43640.1 34.545 220 101 14 4 190 192 401 4.63e-19 89.7
Msa1295740 AT1G53320.1 34.328 201 89 7 4 190 180 351 2.94e-18 86.7
Msa1295740 AT1G53320.1 46.429 84 44 1 373 456 288 370 4.68e-13 70.9
Msa1295740 AT5G18680.2 35.323 201 101 12 4 190 84 269 6.06e-16 78.6
Msa1295740 AT5G18680.2 43.678 87 46 1 372 455 201 287 1.20e-13 72.0
Msa1295740 AT5G18680.1 35.323 201 101 12 4 190 176 361 1.88e-15 78.2
Msa1295740 AT5G18680.1 39.167 120 64 3 339 455 266 379 2.13e-13 72.0
Msa1295740 AT3G06380.2 36.224 196 103 9 4 190 78 260 1.67e-14 74.3
Msa1295740 AT3G06380.1 35.714 196 104 9 4 190 170 352 4.91e-14 73.9

Find 90 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTACATTCCTGATGTATT+TGG 0.157633 8_3:-53947618 Msa1295740:CDS
ATCCCACTTGGTCGAAAATT+TGG 0.167969 8_3:+53950935 None:intergenic
GTTCTACCGGAGAATCATTA+TGG 0.251703 8_3:+53950489 None:intergenic
TTTCTCCTACGGTGCAAAAT+TGG 0.271219 8_3:-53946878 Msa1295740:CDS
ATGATGCAGTACATTCTTCT+TGG 0.281518 8_3:+53950824 None:intergenic
TATGGCAGGTCTGATTTCTT+TGG 0.307220 8_3:-53951010 Msa1295740:CDS
TGGTTGGGGCCCTGACTTCA+TGG 0.311483 8_3:-53946967 Msa1295740:CDS
CGTATTTAAGCAGCTTGTTT+TGG 0.315567 8_3:-53947379 Msa1295740:intron
CTACATGCTCGAACTCTTCT+TGG 0.336761 8_3:+53950890 None:intergenic
TTGAAGAGAGTGAGAGATAT+TGG 0.344771 8_3:-53947908 Msa1295740:CDS
GTGTTGGTGTTTAGACTTCA+TGG 0.351367 8_3:-53950573 Msa1295740:CDS
GGAAATTGAATCTATTCAAC+AGG 0.354908 8_3:-53947982 Msa1295740:CDS
TCTACCACATGAATTGCTTA+TGG 0.366512 8_3:-53947946 Msa1295740:CDS
TTGGTTTGGTTGTAATTGTA+TGG 0.377223 8_3:-53947360 Msa1295740:CDS
GTCAAACTCACATCTTGCTT+TGG 0.379534 8_3:-53948003 Msa1295740:CDS
TAGCCGCGAAAATGATAAAA+AGG 0.383747 8_3:-53947310 Msa1295740:CDS
ATTGTATGGCAGTTAATAAT+AGG 0.397969 8_3:-53947346 Msa1295740:CDS
GGCTTTCCTACATGCAAGAT+TGG 0.403448 8_3:+53946855 None:intergenic
GAAAGGGTAGTCTTGCAGTT+TGG 0.405279 8_3:-53950464 Msa1295740:CDS
GGTGCTGGTGAAGGAGAAAA+AGG 0.407551 8_3:+53950722 None:intergenic
TGAAAATGGCCCATGAAGTC+AGG 0.412357 8_3:+53946957 None:intergenic
GGAAGAGCATCACAATGGTT+GGG 0.430305 8_3:-53946982 Msa1295740:CDS
GCAGAGTATGAATTTGTCAT+TGG 0.435841 8_3:+53950686 None:intergenic
GCAGATGGCAAAGGCTTGTA+AGG 0.442106 8_3:+53946785 None:intergenic
TCAAAAGCAAGGACTGCATA+AGG 0.448680 8_3:-53950610 Msa1295740:CDS
TTTGCCATCTGCTTGATTCG+TGG 0.452748 8_3:-53946774 Msa1295740:CDS
ATCTATTCAACAGGGACAAT+GGG 0.454866 8_3:-53947973 Msa1295740:CDS
GCACGCCCATCAGAGCTACT+AGG 0.464636 8_3:-53950665 Msa1295740:CDS
CTCAGTCCTAGTAGCTCTGA+TGG 0.472044 8_3:+53950659 None:intergenic
TTCTACCGGAGAATCATTAT+GGG 0.474853 8_3:+53950490 None:intergenic
GGTTGGGGCCCTGACTTCAT+GGG 0.474980 8_3:-53946966 Msa1295740:CDS
TTCTCCTTCACCAGCACCGA+AGG 0.479949 8_3:-53950717 Msa1295740:CDS
GGGAAGAGCATCACAATGGT+TGG 0.483765 8_3:-53946983 Msa1295740:CDS
TTTCCCTTCGGTGCTGGTGA+AGG 0.486092 8_3:+53950713 None:intergenic
ACTGTCGTATATAGTGAAAT+CGG 0.492029 8_3:+53950985 None:intergenic
TAGGTAACAATGTTGGAGAC+GGG 0.492846 8_3:+53950759 None:intergenic
GTCTTGCAGTTTGGAAAGAT+CGG 0.499553 8_3:-53950455 Msa1295740:CDS
CAAAAGCAAGGACTGCATAA+GGG 0.505355 8_3:-53950609 Msa1295740:CDS
TACATTGCTCCAAATACATC+AGG 0.507175 8_3:+53947609 None:intergenic
ATTCTCCGGTAGAACGAGAA+AGG 0.508143 8_3:-53950481 Msa1295740:CDS
AATGAGCCTTGGCTCAGTGC+TGG 0.521850 8_3:+53947041 None:intergenic
AGTCAAGGATATGACGAAGT+TGG 0.525647 8_3:+53947286 None:intergenic
TCCATCCCATAATGATTCTC+CGG 0.525966 8_3:-53950495 Msa1295740:CDS
ACAAGGGTTGGATCGAGCCT+TGG 0.530280 8_3:+53950636 None:intergenic
TAAAGGTCTCAAATGAGCCT+TGG 0.532815 8_3:+53947030 None:intergenic
GCTTATGGACATTATCCGTA+GGG 0.534315 8_3:-53947931 Msa1295740:CDS
AATCTATTCAACAGGGACAA+TGG 0.538550 8_3:-53947974 Msa1295740:CDS
ATCTCGTAATGTTTCTCCTA+CGG 0.539696 8_3:-53946889 Msa1295740:CDS
ACTACCCTTTCTCGTTCTAC+CGG 0.546215 8_3:+53950476 None:intergenic
TGTTGGTGTTTAGACTTCAT+GGG 0.546310 8_3:-53950572 Msa1295740:CDS
AACTTCGTCATATCCTTGAC+TGG 0.547745 8_3:-53947284 Msa1295740:CDS
TTAGGTAACAATGTTGGAGA+CGG 0.553086 8_3:+53950758 None:intergenic
AAAGTTTCATCAAATGCAGA+AGG 0.558256 8_3:+53947074 None:intergenic
ACCCTTGTTGCTCAAAAGCA+AGG 0.563852 8_3:-53950621 Msa1295740:CDS
AAGCATGGTCGGAGAACTCA+AGG 0.564464 8_3:-53948081 Msa1295740:CDS
TGCTTATGGACATTATCCGT+AGG 0.565916 8_3:-53947932 Msa1295740:CDS
TTCTCCGGTAGAACGAGAAA+GGG 0.571393 8_3:-53950480 Msa1295740:CDS
GAAGAGCATCACAATGGTTG+GGG 0.571615 8_3:-53946981 Msa1295740:CDS
AGGAAATGGTGCTAACAAGA+TGG 0.575547 8_3:+53950867 None:intergenic
AATCTTGCATGTAGGAAAGC+CGG 0.578764 8_3:-53946853 Msa1295740:CDS
TTGTGTTGCTACAGGAAACA+TGG 0.580273 8_3:-53948111 Msa1295740:CDS
CCTTGGCTCAGTGCTGGTGA+AGG 0.581909 8_3:+53947047 None:intergenic
CCTTCACCAGCACTGAGCCA+AGG 0.586880 8_3:-53947047 Msa1295740:CDS
AAGACAACAGCAGAACGCGC+AGG 0.588296 8_3:+53947885 None:intergenic
ACCGGAGAATCATTATGGGA+TGG 0.594383 8_3:+53950494 None:intergenic
ATGGCATTGAAAAGCATGGT+CGG 0.597357 8_3:-53948092 Msa1295740:CDS
TCAGTCCTAGTAGCTCTGAT+GGG 0.597534 8_3:+53950660 None:intergenic
AATTGGCCAATCTTGCATGT+AGG 0.601422 8_3:-53946861 Msa1295740:CDS
GAAAATGGCCCATGAAGTCA+GGG 0.604079 8_3:+53946958 None:intergenic
ACGAATCAAGCAGATGGCAA+AGG 0.605785 8_3:+53946776 None:intergenic
GAGTGGATAAGCGTAGTACA+TGG 0.606543 8_3:+53946812 None:intergenic
ACAAATATGTTTGTAAACTG+AGG 0.610066 8_3:-53947238 Msa1295740:intron
TCTCCTTCACCAGCACCGAA+GGG 0.619211 8_3:-53950716 Msa1295740:CDS
AAACATGGCATTGAAAAGCA+TGG 0.625441 8_3:-53948096 Msa1295740:CDS
TCTCACTCTCTTCAACCCTA+CGG 0.625842 8_3:+53947916 None:intergenic
AAGGCTTGTAAGGCAGAGAG+TGG 0.626029 8_3:+53946795 None:intergenic
TATGCCACGAATCAAGCAGA+TGG 0.633849 8_3:+53946770 None:intergenic
GTTACCACTATTCAGGAAGG+GGG 0.635875 8_3:-53950788 Msa1295740:intron
GGTTGAACTGCAGCATCATG+TGG 0.636955 8_3:+53950956 None:intergenic
TTAGAATTAAACATCCCACT+TGG 0.645533 8_3:+53950923 None:intergenic
ACTGTCGTATAGAGTGAACT+TGG 0.646011 8_3:+53947100 None:intergenic
GCATGGTCGGAGAACTCAAG+GGG 0.647843 8_3:-53948079 Msa1295740:CDS
GAAATTGAATCTATTCAACA+GGG 0.671920 8_3:-53947981 Msa1295740:CDS
AGGTAACAATGTTGGAGACG+GGG 0.672550 8_3:+53950760 None:intergenic
GAGCTACTAGGACTGAGCCA+AGG 0.685945 8_3:-53950653 Msa1295740:CDS
AGCATGGTCGGAGAACTCAA+GGG 0.702833 8_3:-53948080 Msa1295740:CDS
GGGATGAGCAGCGAAAGTGT+TGG 0.703904 8_3:-53950589 Msa1295740:CDS
AGATGGGAAGAGCATCACAA+TGG 0.704024 8_3:-53946987 Msa1295740:CDS
TGAACTGCAGCATCATGTGG+AGG 0.706539 8_3:+53950959 None:intergenic
ATGTCCATAAGCAATTCATG+TGG 0.710807 8_3:+53947942 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATATTTGTATTTGTT+TGG - chr8_3:53949573-53949592 Msa1295740:intron 10.0%
!! GATTATTAATGAATATAACA+AGG - chr8_3:53948085-53948104 Msa1295740:CDS 15.0%
!! ATTAACAAGGTTTATTATTA+TGG + chr8_3:53949146-53949165 None:intergenic 15.0%
!! ATAGCATAAAAATATTAACA+AGG + chr8_3:53949159-53949178 None:intergenic 15.0%
!! TGAATATAACATAATTCAAT+CGG + chr8_3:53949253-53949272 None:intergenic 15.0%
!!! CAATTTGATTTATATACATA+CGG - chr8_3:53950637-53950656 Msa1295740:CDS 15.0%
!!! AATATTTTAGGTAACAATGT+TGG + chr8_3:53947031-53947050 None:intergenic 20.0%
!!! AAAGGTTCATCAAATATTTT+AGG + chr8_3:53947043-53947062 None:intergenic 20.0%
!! AAATATTAGAAACTGACATA+CGG - chr8_3:53947631-53947650 Msa1295740:CDS 20.0%
!! GAAATTTGTAAAAAGTAGAA+GGG + chr8_3:53947705-53947724 None:intergenic 20.0%
!!! ATGAAAATGTGAAGTTATTT+TGG - chr8_3:53948235-53948254 Msa1295740:intron 20.0%
!! TTGTCTATGTTTATAGAATT+TGG + chr8_3:53948308-53948327 None:intergenic 20.0%
!! TAATTCAATACATTTATGTG+TGG - chr8_3:53948331-53948350 Msa1295740:intron 20.0%
!!! CATTTTTTTTCAAGTACTTA+TGG - chr8_3:53948370-53948389 Msa1295740:intron 20.0%
!! ACATAAATAGGCAATTATTT+GGG - chr8_3:53948993-53949012 Msa1295740:intron 20.0%
!! TTCATAAGTTATTATAGAGA+TGG - chr8_3:53949309-53949328 Msa1295740:intron 20.0%
!! TCATAAGTTATTATAGAGAT+GGG - chr8_3:53949310-53949329 Msa1295740:intron 20.0%
!!! TATCATTGATTTTGTTACTT+AGG + chr8_3:53949374-53949393 None:intergenic 20.0%
!! AAGTAACAAAATCAATGATA+TGG - chr8_3:53949374-53949393 Msa1295740:intron 20.0%
!! TATCATCAAACAAACAAAAT+TGG + chr8_3:53949497-53949516 None:intergenic 20.0%
!! TTAAAAATGGAATATCAAAG+CGG - chr8_3:53949725-53949744 Msa1295740:intron 20.0%
!! TCAAATTGTGAGTATTATAA+GGG + chr8_3:53950625-53950644 None:intergenic 20.0%
!! ATCAAATTGTGAGTATTATA+AGG + chr8_3:53950626-53950645 None:intergenic 20.0%
!!! GTGAATATATTTTTTCTAAC+CGG + chr8_3:53950949-53950968 None:intergenic 20.0%
!! TTTGTCAATTAAAAGTGCAA+CGG + chr8_3:53947547-53947566 None:intergenic 25.0%
! AATATTAGAAACTGACATAC+GGG - chr8_3:53947632-53947651 Msa1295740:CDS 25.0%
! GGAAATTTGTAAAAAGTAGA+AGG + chr8_3:53947706-53947725 None:intergenic 25.0%
! CTAATAAATTGTAGTATCTG+AGG + chr8_3:53947740-53947759 None:intergenic 25.0%
!! AGTTTAAAGTCTTAAACTGA+AGG - chr8_3:53947758-53947777 Msa1295740:intron 25.0%
!! GTTTAAAGTCTTAAACTGAA+GGG - chr8_3:53947759-53947778 Msa1295740:intron 25.0%
!!! ATCCTATTGTTGTTAACTTT+TGG - chr8_3:53947817-53947836 Msa1295740:intron 25.0%
!! AATTTGCTTTCCAAGAAAAT+AGG - chr8_3:53947916-53947935 Msa1295740:CDS 25.0%
! ATTTGCTTTCCAAGAAAATA+GGG - chr8_3:53947917-53947936 Msa1295740:CDS 25.0%
! TGATTAATTGTGTTTAGTGA+AGG + chr8_3:53948127-53948146 None:intergenic 25.0%
! ACATTTAGTCAAAACAAGTT+AGG - chr8_3:53948709-53948728 Msa1295740:intron 25.0%
! CTAATCACAATCATTTCATT+TGG - chr8_3:53948938-53948957 Msa1295740:intron 25.0%
! GACATAAATAGGCAATTATT+TGG - chr8_3:53948992-53949011 Msa1295740:intron 25.0%
! ACATAAATACTCATTGGATT+AGG - chr8_3:53949184-53949203 Msa1295740:intron 25.0%
! ACTGTAAATTCTGTAATCAA+TGG + chr8_3:53949433-53949452 None:intergenic 25.0%
! TGATCGTAACAAAAATACAA+AGG + chr8_3:53949615-53949634 None:intergenic 25.0%
!! AGAATTTAGAATTGTGCATT+TGG - chr8_3:53949634-53949653 Msa1295740:intron 25.0%
! TAAAAATGGAATATCAAAGC+GGG - chr8_3:53949726-53949745 Msa1295740:intron 25.0%
! GAAATTGAATCTATTCAACA+GGG - chr8_3:53949799-53949818 Msa1295740:intron 25.0%
! GAGAACAAAAAAAATCATGA+GGG + chr8_3:53950068-53950087 None:intergenic 25.0%
! AGAGAACAAAAAAAATCATG+AGG + chr8_3:53950069-53950088 None:intergenic 25.0%
! TATTCACTGTGTTTGAAAAA+GGG + chr8_3:53950223-53950242 None:intergenic 25.0%
! ATATTCACTGTGTTTGAAAA+AGG + chr8_3:53950224-53950243 None:intergenic 25.0%
! ATTGTATGGCAGTTAATAAT+AGG - chr8_3:53950434-53950453 Msa1295740:intron 25.0%
! ACAAATATGTTTGTAAACTG+AGG - chr8_3:53950542-53950561 Msa1295740:intron 25.0%
!!! CATTTTTTTTAGCCTTCTAT+AGG - chr8_3:53950586-53950605 Msa1295740:CDS 25.0%
! AAATTGTGAGTATTATAAGG+GGG + chr8_3:53950623-53950642 None:intergenic 25.0%
! CAAATTGTGAGTATTATAAG+GGG + chr8_3:53950624-53950643 None:intergenic 25.0%
!!! AGTCTTGTTTTTCAGTATAA+AGG + chr8_3:53950770-53950789 None:intergenic 25.0%
ACTGTCGTATATAGTGAAAT+CGG + chr8_3:53946798-53946817 None:intergenic 30.0%
TTAGAATTAAACATCCCACT+TGG + chr8_3:53946860-53946879 None:intergenic 30.0%
ATCGAAAAACTCATAGGAAA+TGG + chr8_3:53946930-53946949 None:intergenic 30.0%
! CCTTTTATCGAAAAACTCAT+AGG + chr8_3:53946936-53946955 None:intergenic 30.0%
!! CCTATGAGTTTTTCGATAAA+AGG - chr8_3:53946933-53946952 Msa1295740:CDS 30.0%
TAACATTGTTACCACTATTC+AGG - chr8_3:53946985-53947004 Msa1295740:CDS 30.0%
TGATCAGAAATGTAGTTTGA+GGG + chr8_3:53947431-53947450 None:intergenic 30.0%
ATGATCAGAAATGTAGTTTG+AGG + chr8_3:53947432-53947451 None:intergenic 30.0%
GTCCAAAAGTTAACAACAAT+AGG + chr8_3:53947822-53947841 None:intergenic 30.0%
ACAACAACCAATTAACCATT+CGG + chr8_3:53947964-53947983 None:intergenic 30.0%
GGCATGATATGTTAAATATG+TGG - chr8_3:53948046-53948065 Msa1295740:CDS 30.0%
TGTTAAATATGTGGTTAACG+CGG - chr8_3:53948055-53948074 Msa1295740:CDS 30.0%
AGAATTTGGAAGAACTCAAT+TGG + chr8_3:53948294-53948313 None:intergenic 30.0%
TCACGATAGATTTATTTCAG+AGG - chr8_3:53948613-53948632 Msa1295740:intron 30.0%
GTTATGCAGTTGACATAAAT+AGG - chr8_3:53948981-53949000 Msa1295740:intron 30.0%
AATTATTTGGGAGAGATCTT+GGG - chr8_3:53949005-53949024 Msa1295740:intron 30.0%
!!! GTGCAGAATTTTAGTTTTGT+AGG - chr8_3:53949109-53949128 Msa1295740:intron 30.0%
TGAAGCACATAAATACTCAT+TGG - chr8_3:53949178-53949197 Msa1295740:intron 30.0%
! ACCAAATGGTAGTTCAATTT+TGG - chr8_3:53949339-53949358 Msa1295740:intron 30.0%
! CCAAATGGTAGTTCAATTTT+GGG - chr8_3:53949340-53949359 Msa1295740:intron 30.0%
! CAAATGGTAGTTCAATTTTG+GGG - chr8_3:53949341-53949360 Msa1295740:intron 30.0%
! AAATGGTAGTTCAATTTTGG+GGG - chr8_3:53949342-53949361 Msa1295740:intron 30.0%
! AAATGAGCAACTCATTTTAG+AGG + chr8_3:53949460-53949479 None:intergenic 30.0%
TTAGAATTGTGCATTTGGAT+TGG - chr8_3:53949639-53949658 Msa1295740:intron 30.0%
AAAAATGGAATATCAAAGCG+GGG - chr8_3:53949727-53949746 Msa1295740:intron 30.0%
GGAAATTGAATCTATTCAAC+AGG - chr8_3:53949798-53949817 Msa1295740:intron 30.0%
TATTACCTGCTTCATGAAAT+AGG + chr8_3:53950003-53950022 None:intergenic 30.0%
TAAATTATTCTCCCACTTTC+TGG - chr8_3:53950021-53950040 Msa1295740:intron 30.0%
TTCTACATTCCTGATGTATT+TGG - chr8_3:53950162-53950181 Msa1295740:intron 30.0%
!! TTGGTTTGGTTGTAATTGTA+TGG - chr8_3:53950420-53950439 Msa1295740:intron 30.0%
TTGATTTATATACATACGGC+AGG - chr8_3:53950641-53950660 Msa1295740:CDS 30.0%
AAAGTTTCATCAAATGCAGA+AGG + chr8_3:53950709-53950728 None:intergenic 30.0%
TGAAAAACAAGACTCTTAGA+TGG - chr8_3:53950776-53950795 Msa1295740:CDS 30.0%
GAAAAACAAGACTCTTAGAT+GGG - chr8_3:53950777-53950796 Msa1295740:intron 30.0%
! TTTGAGCTTGTAACTTTTGT+TGG - chr8_3:53950865-53950884 Msa1295740:CDS 30.0%
! AACCAAATTTTCGACCAAGT+GGG - chr8_3:53946843-53946862 Msa1295740:CDS 35.0%
ATGATGCAGTACATTCTTCT+TGG + chr8_3:53946959-53946978 None:intergenic 35.0%
ATTGTTACCACTATTCAGGA+AGG - chr8_3:53946989-53947008 Msa1295740:CDS 35.0%
TTGTTACCACTATTCAGGAA+GGG - chr8_3:53946990-53947009 Msa1295740:CDS 35.0%
TTAGGTAACAATGTTGGAGA+CGG + chr8_3:53947025-53947044 None:intergenic 35.0%
GCAGAGTATGAATTTGTCAT+TGG + chr8_3:53947097-53947116 None:intergenic 35.0%
! TGTTGGTGTTTAGACTTCAT+GGG - chr8_3:53947208-53947227 Msa1295740:intron 35.0%
TTCTACCGGAGAATCATTAT+GGG + chr8_3:53947293-53947312 None:intergenic 35.0%
GTATCTGAGGAATCTCTTAT+CGG + chr8_3:53947727-53947746 None:intergenic 35.0%
TTGAGTTCATCTTTCACATG+TGG + chr8_3:53947898-53947917 None:intergenic 35.0%
! AACACTAGTCCCTATTTTCT+TGG + chr8_3:53947929-53947948 None:intergenic 35.0%
AGTTTACCCGAATGGTTAAT+TGG - chr8_3:53947954-53947973 Msa1295740:CDS 35.0%
CAACAACCAATTAACCATTC+GGG + chr8_3:53947963-53947982 None:intergenic 35.0%
ATGGTTAATTGGTTGTTGTC+TGG - chr8_3:53947965-53947984 Msa1295740:CDS 35.0%
! TGGTTTTCCTAGACTATCAA+TGG - chr8_3:53948390-53948409 Msa1295740:intron 35.0%
TTATGATCGGATCAACTCTA+GGG + chr8_3:53948528-53948547 None:intergenic 35.0%
ATTATGATCGGATCAACTCT+AGG + chr8_3:53948529-53948548 None:intergenic 35.0%
GTGCAATCGGAAATTATGAT+CGG + chr8_3:53948541-53948560 None:intergenic 35.0%
TATGTTATTATGCGTCTCGT+GGG + chr8_3:53948647-53948666 None:intergenic 35.0%
GAGACGCATAATAACATAGT+CGG - chr8_3:53948649-53948668 Msa1295740:intron 35.0%
AGACGCATAATAACATAGTC+GGG - chr8_3:53948650-53948669 Msa1295740:intron 35.0%
! TTTTGAGCAAACACTGAAAG+TGG - chr8_3:53948810-53948829 Msa1295740:intron 35.0%
AAACACTGAAAGTGGAATGA+TGG - chr8_3:53948818-53948837 Msa1295740:intron 35.0%
GATTAATTAGAGTGATCACG+TGG + chr8_3:53948917-53948936 None:intergenic 35.0%
CAATTATTTGGGAGAGATCT+TGG - chr8_3:53949004-53949023 Msa1295740:intron 35.0%
CAATTCTCACTCAAACATCT+TGG - chr8_3:53949038-53949057 Msa1295740:intron 35.0%
ATAATTCAATCGGTGTGTGT+CGG + chr8_3:53949243-53949262 None:intergenic 35.0%
CCCAAAATTGAACTACCATT+TGG + chr8_3:53949343-53949362 None:intergenic 35.0%
CTGCATAAAATGCATCTGTT+AGG - chr8_3:53949546-53949565 Msa1295740:intron 35.0%
CATAAAATGCATCTGTTAGG+AGG - chr8_3:53949549-53949568 Msa1295740:intron 35.0%
! AAACATGGCATTGAAAAGCA+TGG - chr8_3:53949684-53949703 Msa1295740:intron 35.0%
GAACTCAAGGGGATTAAAAA+TGG - chr8_3:53949712-53949731 Msa1295740:intron 35.0%
! AGAGCGAGAATTTTCTCTAT+CGG - chr8_3:53949755-53949774 Msa1295740:intron 35.0%
AATCTATTCAACAGGGACAA+TGG - chr8_3:53949806-53949825 Msa1295740:intron 35.0%
ATCTATTCAACAGGGACAAT+GGG - chr8_3:53949807-53949826 Msa1295740:intron 35.0%
TCTACCACATGAATTGCTTA+TGG - chr8_3:53949834-53949853 Msa1295740:intron 35.0%
ATGTCCATAAGCAATTCATG+TGG + chr8_3:53949841-53949860 None:intergenic 35.0%
TTGAAGAGAGTGAGAGATAT+TGG - chr8_3:53949872-53949891 Msa1295740:intron 35.0%
!! AGTCTTGATGATCTCTTTTG+TGG + chr8_3:53949953-53949972 None:intergenic 35.0%
AATGTGATCATTCCACATTG+CGG + chr8_3:53949979-53949998 None:intergenic 35.0%
CATTTCCTATTTCATGAAGC+AGG - chr8_3:53949995-53950014 Msa1295740:intron 35.0%
! TTTGGATTAGACCAGAAAGT+GGG + chr8_3:53950035-53950054 None:intergenic 35.0%
! ATTTGGATTAGACCAGAAAG+TGG + chr8_3:53950036-53950055 None:intergenic 35.0%
CATGAGGGAAAAGACTAATT+TGG + chr8_3:53950053-53950072 None:intergenic 35.0%
CTCTTAATAAAGCAATGCCA+TGG + chr8_3:53950130-53950149 None:intergenic 35.0%
! CATGGCATTGCTTTATTAAG+AGG - chr8_3:53950128-53950147 Msa1295740:intron 35.0%
TACATTGCTCCAAATACATC+AGG + chr8_3:53950174-53950193 None:intergenic 35.0%
ACTTACTTGCTCTACGTTTA+TGG - chr8_3:53950314-53950333 Msa1295740:intron 35.0%
!! CGTATTTAAGCAGCTTGTTT+TGG - chr8_3:53950401-53950420 Msa1295740:intron 35.0%
!!! TTAAGCAGCTTGTTTTGGTT+TGG - chr8_3:53950406-53950425 Msa1295740:intron 35.0%
TAGCCGCGAAAATGATAAAA+AGG - chr8_3:53950470-53950489 Msa1295740:CDS 35.0%
! GGACCTTTTTATCATTTTCG+CGG + chr8_3:53950476-53950495 None:intergenic 35.0%
AGAAAAATCATCTCCAGTCA+AGG + chr8_3:53950512-53950531 None:intergenic 35.0%
! ATACGGCAGGTCAAATTTTT+GGG - chr8_3:53950654-53950673 Msa1295740:CDS 35.0%
! GCACAGTTTTCACTTGAAAA+TGG + chr8_3:53950840-53950859 None:intergenic 35.0%
ATCTCGTAATGTTTCTCCTA+CGG - chr8_3:53950891-53950910 Msa1295740:CDS 35.0%
TATGGCAGGTCTGATTTCTT+TGG - chr8_3:53946770-53946789 Msa1295740:CDS 40.0%
! CAACCAAATTTTCGACCAAG+TGG - chr8_3:53946842-53946861 Msa1295740:CDS 40.0%
ATCCCACTTGGTCGAAAATT+TGG + chr8_3:53946848-53946867 None:intergenic 40.0%
! AGGAAATGGTGCTAACAAGA+TGG + chr8_3:53946916-53946935 None:intergenic 40.0%
TGTTACCACTATTCAGGAAG+GGG - chr8_3:53946991-53947010 Msa1295740:CDS 40.0%
TAGGTAACAATGTTGGAGAC+GGG + chr8_3:53947024-53947043 None:intergenic 40.0%
!! GTCATTGGACTTTTTCCCTT+CGG + chr8_3:53947082-53947101 None:intergenic 40.0%
!! TCCTTGCTTTTGAGCAACAA+GGG + chr8_3:53947163-53947182 None:intergenic 40.0%
TCAAAAGCAAGGACTGCATA+AGG - chr8_3:53947170-53947189 Msa1295740:intron 40.0%
CAAAAGCAAGGACTGCATAA+GGG - chr8_3:53947171-53947190 Msa1295740:intron 40.0%
! GTGTTGGTGTTTAGACTTCA+TGG - chr8_3:53947207-53947226 Msa1295740:intron 40.0%
TCCATCCCATAATGATTCTC+CGG - chr8_3:53947285-53947304 Msa1295740:CDS 40.0%
GTTCTACCGGAGAATCATTA+TGG + chr8_3:53947294-53947313 None:intergenic 40.0%
GTCTTGCAGTTTGGAAAGAT+CGG - chr8_3:53947325-53947344 Msa1295740:CDS 40.0%
CGGAAAAGACATATTCGTCA+TGG - chr8_3:53947345-53947364 Msa1295740:CDS 40.0%
TAATTGAACACCAAGAACCG+TGG - chr8_3:53947493-53947512 Msa1295740:intron 40.0%
! GTTTTTGCAGTTTACCCGAA+TGG - chr8_3:53947946-53947965 Msa1295740:CDS 40.0%
GCATGATACATCACTGTGAA+AGG - chr8_3:53948025-53948044 Msa1295740:CDS 40.0%
! AAGCTTGCCATTGATAGTCT+AGG + chr8_3:53948400-53948419 None:intergenic 40.0%
! ATTTGGCAAAGTGTCACAAG+TGG + chr8_3:53948495-53948514 None:intergenic 40.0%
TATGATCGGATCAACTCTAG+GGG + chr8_3:53948527-53948546 None:intergenic 40.0%
TCCGATTGCACAAAACCTAT+CGG - chr8_3:53948550-53948569 Msa1295740:intron 40.0%
!!! TCGATCGGCTTATTTTGCAT+CGG - chr8_3:53948582-53948601 Msa1295740:intron 40.0%
CTATGTTATTATGCGTCTCG+TGG + chr8_3:53948648-53948667 None:intergenic 40.0%
CTCAGTCAGAGCTAAATGTT+AGG - chr8_3:53948749-53948768 Msa1295740:intron 40.0%
CTTTCAGTGCGTCATAGTAA+CGG + chr8_3:53948778-53948797 None:intergenic 40.0%
TTACTATGACGCACTGAAAG+TGG - chr8_3:53948778-53948797 Msa1295740:intron 40.0%
GGTGCTTTCATATATCAGTG+TGG - chr8_3:53948959-53948978 Msa1295740:intron 40.0%
TTCTCACTCAAACATCTTGG+TGG - chr8_3:53949041-53949060 Msa1295740:intron 40.0%
TCTCACTCAAACATCTTGGT+GGG - chr8_3:53949042-53949061 Msa1295740:intron 40.0%
ATGAAGCACAGACTCATACA+CGG + chr8_3:53949287-53949306 None:intergenic 40.0%
GAGATGGGTATATGACCAAA+TGG - chr8_3:53949325-53949344 Msa1295740:intron 40.0%
!! GAGCAACTCATTTTAGAGGT+TGG + chr8_3:53949456-53949475 None:intergenic 40.0%
! TTGTGTTGCTACAGGAAACA+TGG - chr8_3:53949669-53949688 Msa1295740:intron 40.0%
! ATGGCATTGAAAAGCATGGT+CGG - chr8_3:53949688-53949707 Msa1295740:intron 40.0%
GTCAAACTCACATCTTGCTT+TGG - chr8_3:53949777-53949796 Msa1295740:intron 40.0%
TGCTTATGGACATTATCCGT+AGG - chr8_3:53949848-53949867 Msa1295740:intron 40.0%
GCTTATGGACATTATCCGTA+GGG - chr8_3:53949849-53949868 Msa1295740:intron 40.0%
! TGCTGTTGTCTTTTGTGCTT+CGG - chr8_3:53949906-53949925 Msa1295740:intron 40.0%
GTGCTTCGGTATGTAAATCA+TGG - chr8_3:53949920-53949939 Msa1295740:intron 40.0%
CTTCGGTATGTAAATCATGG+AGG - chr8_3:53949923-53949942 Msa1295740:intron 40.0%
!! CTTGATGATCTCTTTTGTGG+CGG + chr8_3:53949950-53949969 None:intergenic 40.0%
CTTCATGTGTATGAATAGCC+TGG - chr8_3:53950092-53950111 Msa1295740:intron 40.0%
CACTGTGTTTGAAAAAGGGA+TGG + chr8_3:53950219-53950238 None:intergenic 40.0%
AGTCAAGGATATGACGAAGT+TGG + chr8_3:53950497-53950516 None:intergenic 40.0%
AACTTCGTCATATCCTTGAC+TGG - chr8_3:53950496-53950515 Msa1295740:CDS 40.0%
GTGGAAGAAAAGCCTATAGA+AGG + chr8_3:53950601-53950620 None:intergenic 40.0%
TTGTGAGTATTATAAGGGGG+TGG + chr8_3:53950620-53950639 None:intergenic 40.0%
! CATACGGCAGGTCAAATTTT+TGG - chr8_3:53950653-53950672 Msa1295740:CDS 40.0%
! TACGGCAGGTCAAATTTTTG+GGG - chr8_3:53950655-53950674 Msa1295740:CDS 40.0%
ACTGTCGTATAGAGTGAACT+TGG + chr8_3:53950683-53950702 None:intergenic 40.0%
TAAAGGTCTCAAATGAGCCT+TGG + chr8_3:53950753-53950772 None:intergenic 40.0%
! GAGCTTGTAACTTTTGTTGG+TGG - chr8_3:53950868-53950887 Msa1295740:CDS 40.0%
TTTCTCCTACGGTGCAAAAT+TGG - chr8_3:53950902-53950921 Msa1295740:CDS 40.0%
AATTGGCCAATCTTGCATGT+AGG - chr8_3:53950919-53950938 Msa1295740:CDS 40.0%
AATCTTGCATGTAGGAAAGC+CGG - chr8_3:53950927-53950946 Msa1295740:CDS 40.0%
CTACATGCTCGAACTCTTCT+TGG + chr8_3:53946893-53946912 None:intergenic 45.0%
GTTACCACTATTCAGGAAGG+GGG - chr8_3:53946992-53947011 Msa1295740:CDS 45.0%
AGGTAACAATGTTGGAGACG+GGG + chr8_3:53947023-53947042 None:intergenic 45.0%
!! TCAGTCCTAGTAGCTCTGAT+GGG + chr8_3:53947123-53947142 None:intergenic 45.0%
! TGCTTTTGAGCAACAAGGGT+TGG + chr8_3:53947159-53947178 None:intergenic 45.0%
ACCCTTGTTGCTCAAAAGCA+AGG - chr8_3:53947159-53947178 Msa1295740:intron 45.0%
!! GTCCTTGCTTTTGAGCAACA+AGG + chr8_3:53947164-53947183 None:intergenic 45.0%
ACCGGAGAATCATTATGGGA+TGG + chr8_3:53947289-53947308 None:intergenic 45.0%
ATTCTCCGGTAGAACGAGAA+AGG - chr8_3:53947299-53947318 Msa1295740:CDS 45.0%
TTCTCCGGTAGAACGAGAAA+GGG - chr8_3:53947300-53947319 Msa1295740:CDS 45.0%
ACTACCCTTTCTCGTTCTAC+CGG + chr8_3:53947307-53947326 None:intergenic 45.0%
! GAAAGGGTAGTCTTGCAGTT+TGG - chr8_3:53947316-53947335 Msa1295740:CDS 45.0%
TCTCAATTGCGTCAAGCAGA+TGG + chr8_3:53947407-53947426 None:intergenic 45.0%
!! ATGTTTTTGCCTGCATGCCA+CGG + chr8_3:53947513-53947532 None:intergenic 45.0%
TATGCTTATTCAAGCCGCAG+TGG + chr8_3:53947588-53947607 None:intergenic 45.0%
TTGTCTGGATATGCCTTACC+AGG - chr8_3:53947980-53947999 Msa1295740:CDS 45.0%
TGTCTGGATATGCCTTACCA+GGG - chr8_3:53947981-53948000 Msa1295740:CDS 45.0%
AAACTAGCAGTCTAGTACCC+TGG + chr8_3:53948001-53948020 None:intergenic 45.0%
TCTAGGGGCTTGTGAGTATT+TGG + chr8_3:53948512-53948531 None:intergenic 45.0%
!! CCCGATAGGTTTTGTGCAAT+CGG + chr8_3:53948554-53948573 None:intergenic 45.0%
CCGATTGCACAAAACCTATC+GGG - chr8_3:53948551-53948570 Msa1295740:intron 45.0%
GCATAATAACATAGTCGGGC+CGG - chr8_3:53948654-53948673 Msa1295740:intron 45.0%
! ACTCATTGGATTAGGTGTCC+CGG - chr8_3:53949192-53949211 Msa1295740:intron 45.0%
!! GTGCAGTTTTGTGTTGCTAC+AGG - chr8_3:53949661-53949680 Msa1295740:intron 45.0%
TCTCACTCTCTTCAACCCTA+CGG + chr8_3:53949867-53949886 None:intergenic 45.0%
ATCAAGACTCTTCCGCAATG+TGG - chr8_3:53949964-53949983 Msa1295740:intron 45.0%
AGCAATGCCATGGATAAGCA+CGG + chr8_3:53950120-53950139 None:intergenic 45.0%
!! AGATGGGAAGAGCATCACAA+TGG - chr8_3:53950793-53950812 Msa1295740:intron 45.0%
!! GGAAGAGCATCACAATGGTT+GGG - chr8_3:53950798-53950817 Msa1295740:intron 45.0%
!! GAAGAGCATCACAATGGTTG+GGG - chr8_3:53950799-53950818 Msa1295740:intron 45.0%
GAAAATGGCCCATGAAGTCA+GGG + chr8_3:53950825-53950844 None:intergenic 45.0%
TGAAAATGGCCCATGAAGTC+AGG + chr8_3:53950826-53950845 None:intergenic 45.0%
! ATTGGCCAATTTTGCACCGT+AGG + chr8_3:53950910-53950929 None:intergenic 45.0%
GGCTTTCCTACATGCAAGAT+TGG + chr8_3:53950928-53950947 None:intergenic 45.0%
GAGTGGATAAGCGTAGTACA+TGG + chr8_3:53950971-53950990 None:intergenic 45.0%
ACGAATCAAGCAGATGGCAA+AGG + chr8_3:53951007-53951026 None:intergenic 45.0%
! TTTGCCATCTGCTTGATTCG+TGG - chr8_3:53951006-53951025 Msa1295740:CDS 45.0%
TATGCCACGAATCAAGCAGA+TGG + chr8_3:53951013-53951032 None:intergenic 45.0%
!!! AAAAAATATGTAATTTTTTT+TGG + chr8_3:53948458-53948477 None:intergenic 5.0%
TGAACTGCAGCATCATGTGG+AGG + chr8_3:53946824-53946843 None:intergenic 50.0%
GGTTGAACTGCAGCATCATG+TGG + chr8_3:53946827-53946846 None:intergenic 50.0%
GTTTCCCCCTTCCTGAATAG+TGG + chr8_3:53946999-53947018 None:intergenic 50.0%
!! GGTGCTGGTGAAGGAGAAAA+AGG + chr8_3:53947061-53947080 None:intergenic 50.0%
!! CTCAGTCCTAGTAGCTCTGA+TGG + chr8_3:53947124-53947143 None:intergenic 50.0%
CACGAACCATAGATCCACTG+CGG - chr8_3:53947571-53947590 Msa1295740:intron 50.0%
TTCAAGCCGCAGTGGATCTA+TGG + chr8_3:53947580-53947599 None:intergenic 50.0%
GGCGTAGCAACACTTCATGT+AGG - chr8_3:53947780-53947799 Msa1295740:intron 50.0%
AGCAGTCTAGTACCCTGGTA+AGG + chr8_3:53947996-53948015 None:intergenic 50.0%
CACAAAACCTATCGGGAGAC+AGG - chr8_3:53948558-53948577 Msa1295740:intron 50.0%
TATCGGGAGACAGGATCGAT+CGG - chr8_3:53948567-53948586 Msa1295740:intron 50.0%
ATGTGTGTGCAGCCTGCTTT+GGG + chr8_3:53948693-53948712 None:intergenic 50.0%
AATGTGTGTGCAGCCTGCTT+TGG + chr8_3:53948694-53948713 None:intergenic 50.0%
ACACGATAGGTATCCGACAC+CGG + chr8_3:53949214-53949233 None:intergenic 50.0%
!! GTGTCGGTGTTAGACACGAT+AGG + chr8_3:53949227-53949246 None:intergenic 50.0%
AAGCATGGTCGGAGAACTCA+AGG - chr8_3:53949699-53949718 Msa1295740:intron 50.0%
AGCATGGTCGGAGAACTCAA+GGG - chr8_3:53949700-53949719 Msa1295740:intron 50.0%
GCAATGCCATGGATAAGCAC+GGG + chr8_3:53950119-53950138 None:intergenic 50.0%
!! GGGAAGAGCATCACAATGGT+TGG - chr8_3:53950797-53950816 Msa1295740:intron 50.0%
AAGGCTTGTAAGGCAGAGAG+TGG + chr8_3:53950988-53951007 None:intergenic 50.0%
GCAGATGGCAAAGGCTTGTA+AGG + chr8_3:53950998-53951017 None:intergenic 50.0%
! TTCTCCTTCACCAGCACCGA+AGG - chr8_3:53947063-53947082 Msa1295740:CDS 55.0%
! TCTCCTTCACCAGCACCGAA+GGG - chr8_3:53947064-53947083 Msa1295740:CDS 55.0%
!! TTTCCCTTCGGTGCTGGTGA+AGG + chr8_3:53947070-53947089 None:intergenic 55.0%
!! GGACTTTTTCCCTTCGGTGC+TGG + chr8_3:53947076-53947095 None:intergenic 55.0%
GAGCTACTAGGACTGAGCCA+AGG - chr8_3:53947127-53947146 Msa1295740:intron 55.0%
ACAAGGGTTGGATCGAGCCT+TGG + chr8_3:53947147-53947166 None:intergenic 55.0%
! GGGATGAGCAGCGAAAGTGT+TGG - chr8_3:53947191-53947210 Msa1295740:intron 55.0%
AAGGCTTGGAAGGCAGAGAG+TGG + chr8_3:53947382-53947401 None:intergenic 55.0%
TCAAGCAGATGGCGAAGGCT+TGG + chr8_3:53947396-53947415 None:intergenic 55.0%
TTGCGTCAAGCAGATGGCGA+AGG + chr8_3:53947401-53947420 None:intergenic 55.0%
CGCAGTGGATCTATGGTTCG+TGG + chr8_3:53947573-53947592 None:intergenic 55.0%
GATCGATCCTGTCTCCCGAT+AGG + chr8_3:53948568-53948587 None:intergenic 55.0%
TTTGGGCCCATTTCCAGGTC+CGG + chr8_3:53948676-53948695 None:intergenic 55.0%
! TGGATTAGGTGTCCCGGTGT+CGG - chr8_3:53949198-53949217 Msa1295740:intron 55.0%
CACGATAGGTATCCGACACC+GGG + chr8_3:53949213-53949232 None:intergenic 55.0%
GCATGGTCGGAGAACTCAAG+GGG - chr8_3:53949701-53949720 Msa1295740:intron 55.0%
AAGACAACAGCAGAACGCGC+AGG + chr8_3:53949898-53949917 None:intergenic 55.0%
AATGAGCCTTGGCTCAGTGC+TGG + chr8_3:53950742-53950761 None:intergenic 55.0%
GCACGCCCATCAGAGCTACT+AGG - chr8_3:53947115-53947134 Msa1295740:CDS 60.0%
GCAGATGGCGAAGGCTTGGA+AGG + chr8_3:53947392-53947411 None:intergenic 60.0%
CACCAAGAACCGTGGCATGC+AGG - chr8_3:53947501-53947520 Msa1295740:intron 60.0%
TGCCTGCATGCCACGGTTCT+TGG + chr8_3:53947506-53947525 None:intergenic 60.0%
TAACATAGTCGGGCCGGACC+TGG - chr8_3:53948660-53948679 Msa1295740:intron 60.0%
! CCTGCTTTGGGCCCATTTCC+AGG + chr8_3:53948681-53948700 None:intergenic 60.0%
CCTGGAAATGGGCCCAAAGC+AGG - chr8_3:53948678-53948697 Msa1295740:intron 60.0%
CCATGGATAAGCACGGGACC+AGG + chr8_3:53950113-53950132 None:intergenic 60.0%
CCTGGTCCCGTGCTTATCCA+TGG - chr8_3:53950110-53950129 Msa1295740:intron 60.0%
!! CCTTGGCTCAGTGCTGGTGA+AGG + chr8_3:53950736-53950755 None:intergenic 60.0%
! CCTTCACCAGCACTGAGCCA+AGG - chr8_3:53950733-53950752 Msa1295740:CDS 60.0%
TGGTTGGGGCCCTGACTTCA+TGG - chr8_3:53950813-53950832 Msa1295740:CDS 60.0%
GGTTGGGGCCCTGACTTCAT+GGG - chr8_3:53950814-53950833 Msa1295740:CDS 60.0%
AGTCGGGCCGGACCTGGAAA+TGG - chr8_3:53948666-53948685 Msa1295740:intron 65.0%
GTCGGGCCGGACCTGGAAAT+GGG - chr8_3:53948667-53948686 Msa1295740:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 53946767 53951035 53946767 ID=Msa1295740;Name=Msa1295740
chr8_3 mRNA 53946767 53951035 53946767 ID=Msa1295740-mRNA-1;Parent=Msa1295740;Name=Msa1295740-mRNA-1;_AED=0.36;_eAED=0.38;_QI=0|0|0|1|0.16|0.14|7|0|459
chr8_3 exon 53950811 53951035 53950811 ID=Msa1295740-mRNA-1:exon:15569;Parent=Msa1295740-mRNA-1
chr8_3 exon 53950570 53950795 53950570 ID=Msa1295740-mRNA-1:exon:15568;Parent=Msa1295740-mRNA-1
chr8_3 exon 53950442 53950560 53950442 ID=Msa1295740-mRNA-1:exon:15567;Parent=Msa1295740-mRNA-1
chr8_3 exon 53947890 53948135 53947890 ID=Msa1295740-mRNA-1:exon:15566;Parent=Msa1295740-mRNA-1
chr8_3 exon 53947612 53947652 53947612 ID=Msa1295740-mRNA-1:exon:15565;Parent=Msa1295740-mRNA-1
chr8_3 exon 53947239 53947388 53947239 ID=Msa1295740-mRNA-1:exon:15564;Parent=Msa1295740-mRNA-1
chr8_3 exon 53946767 53947139 53946767 ID=Msa1295740-mRNA-1:exon:15563;Parent=Msa1295740-mRNA-1
chr8_3 CDS 53950811 53951035 53950811 ID=Msa1295740-mRNA-1:cds;Parent=Msa1295740-mRNA-1
chr8_3 CDS 53950570 53950795 53950570 ID=Msa1295740-mRNA-1:cds;Parent=Msa1295740-mRNA-1
chr8_3 CDS 53950442 53950560 53950442 ID=Msa1295740-mRNA-1:cds;Parent=Msa1295740-mRNA-1
chr8_3 CDS 53947890 53948135 53947890 ID=Msa1295740-mRNA-1:cds;Parent=Msa1295740-mRNA-1
chr8_3 CDS 53947612 53947652 53947612 ID=Msa1295740-mRNA-1:cds;Parent=Msa1295740-mRNA-1
chr8_3 CDS 53947239 53947388 53947239 ID=Msa1295740-mRNA-1:cds;Parent=Msa1295740-mRNA-1
chr8_3 CDS 53946767 53947139 53946767 ID=Msa1295740-mRNA-1:cds;Parent=Msa1295740-mRNA-1
Gene Sequence

>Msa1295740

ATGTATGGCAGGTCTGATTTCTTTGGCACCGATTTCACTATATACGACAGTCAACCTCCACATGATGCTGCAGTTCAACCAAATTTTCGACCAAGTGGGATGTTTAATTCTAAGCATGTGTCACCAAGAAGAGTTCGAGCATGTAGCCATCTTGTTAGCACCATTTCCTATGAGTTTTTCGATAAAAGGCCAAGAAGAATGTACTGCATCATGAACTCTAACATTGAAGGGGGAAACGCCCCGTCTCCAACATTGTTACCTAAAATATTTGATGAACCTTTTTCTCCTTCACCAGCACCGAAGGGAAAAAGTCCAATGACAAATTCATACTCTGCACGCCCATCAGAGCTACTAGGACTGAGCCAAGGCTCGATCCAACCCTTGTTGCTCAAAAGCAAGGACTGCATAAGGGATGAGCAGCGAAAGTGTTGGTGTTTAGACTTCATGGGTCTGCGCTCTTCAAAGAACTTTGAACTTGTAGAAGATGTTGTTGATCCATCCCATAATGATTCTCCGGTAGAACGAGAAAGGGTAGTCTTGCAGTTTGGAAAGATCGGAAAAGACATATTCTTTTGTGTTGCTACAGGAAACATGGCATTGAAAAGCATGGTCGGAGAACTCAAGGGGATTAAAAATGGAATATCAAAGCGGGGTGCTGAGAGCGAGAATTTTCTCTATCGGTCAAACTCACATCTTGCTTTGGAAATTGAATCTATTCAACAGGGACAATGGGCAAGTCTACCACATGAATTGCTTATGGACATTATCCGTAGGGTTGAAGAGAGTGAGAGATATTGGCCTGCGCGTTCTGCTGTTGAAGAGAAAAACTTCTACATTCCTGATGTATTTGGAGCAATCTTGTTTTGGTTTGGTTGTAATTGTATGGCAGTTAATAATAGGAGTAAGTTGTTATTAGCCGCGAAAATGATAAAAAGGTCCAACTTCGTCATATCCTTGACTGGAGATGATTTTTCTCTAGCAAGTAACAAATATGTTTGTAAACTGAGGTCAAATTTTTGGGGCACCAAGTTCACTCTATACGACAGTCAACCTTCTGCATTTGATGAAACTTTTTCTCCTTCACCAGCACTGAGCCAAGGCTCATTTGAGACCTTTATACTGAAAAACAAGACTCTTAGATGGGAAGAGCATCACAATGGTTGGGGCCCTGACTTCATGGGCCATTTTCAAGTGAAAACTGTGCGAAACTTTGAGCTTGTAACTTTTGTTGGTGGATCTCGTAATGTTTCTCCTACGGTGCAAAATTGGCCAATCTTGCATGTAGGAAAGCCGGTTAGAAAAAATATATTCACCATGTACTACGCTTATCCACTCTCTGCCTTACAAGCCTTTGCCATCTGCTTGATTCGTGGCATATAA
Protein sequence

>Msa1295740

MYGRSDFFGTDFTIYDSQPPHDAAVQPNFRPSGMFNSKHVSPRRVRACSHLVSTISYEFFDKRPRRMYCIMNSNIEGGNAPSPTLLPKIFDEPFSPSPAPKGKSPMTNSYSARPSELLGLSQGSIQPLLLKSKDCIRDEQRKCWCLDFMGLRSSKNFELVEDVVDPSHNDSPVERERVVLQFGKIGKDIFFCVATGNMALKSMVGELKGIKNGISKRGAESENFLYRSNSHLALEIESIQQGQWASLPHELLMDIIRRVEESERYWPARSAVEEKNFYIPDVFGAILFWFGCNCMAVNNRSKLLLAAKMIKRSNFVISLTGDDFSLASNKYVCKLRSNFWGTKFTLYDSQPSAFDETFSPSPALSQGSFETFILKNKTLRWEEHHNGWGPDFMGHFQVKTVRNFELVTFVGGSRNVSPTVQNWPILHVGKPVRKNIFTMYYAYPLSALQAFAICLIRGI*