Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1295920 | sp|P42774|GBF1_ARATH | 46.588 | 337 | 102 | 12 | 74 | 367 | 1 | 302 | 1.23e-71 | 229 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1295920 | G0Z9H1 | 77.259 | 343 | 26 | 4 | 74 | 367 | 1 | 340 | 1.83e-176 | 503 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1295920 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1295920 | MtrunA17_Chr8g0373571 | 75.802 | 343 | 31 | 4 | 74 | 367 | 1 | 340 | 4.53e-177 | 495 |
| Msa1295920 | MtrunA17_Chr8g0369161 | 38.438 | 333 | 132 | 15 | 94 | 357 | 49 | 377 | 3.03e-42 | 152 |
| Msa1295920 | MtrunA17_Chr5g0410531 | 38.170 | 317 | 116 | 13 | 110 | 354 | 67 | 375 | 1.59e-41 | 150 |
| Msa1295920 | MtrunA17_Chr7g0275321 | 33.449 | 287 | 138 | 10 | 113 | 355 | 72 | 349 | 2.25e-30 | 120 |
| Msa1295920 | MtrunA17_Chr8g0347741 | 34.643 | 280 | 142 | 9 | 112 | 355 | 74 | 348 | 1.16e-26 | 109 |
| Msa1295920 | MtrunA17_Chr1g0162721 | 27.070 | 314 | 159 | 12 | 92 | 366 | 19 | 301 | 2.83e-20 | 90.1 |
| Msa1295920 | MtrunA17_Chr4g0065261 | 43.750 | 80 | 44 | 1 | 287 | 366 | 91 | 169 | 1.10e-13 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1295920 | AT4G36730.1 | 46.588 | 337 | 102 | 12 | 74 | 367 | 1 | 302 | 1.25e-72 | 229 |
| Msa1295920 | AT4G36730.2 | 45.970 | 335 | 105 | 11 | 74 | 367 | 1 | 300 | 2.08e-72 | 228 |
| Msa1295920 | AT2G35530.1 | 43.234 | 303 | 111 | 16 | 110 | 354 | 73 | 372 | 4.89e-49 | 170 |
| Msa1295920 | AT1G32150.1 | 38.462 | 299 | 117 | 12 | 110 | 354 | 77 | 362 | 3.07e-40 | 146 |
| Msa1295920 | AT4G01120.1 | 32.258 | 279 | 121 | 9 | 113 | 355 | 71 | 317 | 1.89e-24 | 103 |
| Msa1295920 | AT2G46270.1 | 32.281 | 285 | 127 | 12 | 111 | 355 | 69 | 327 | 5.41e-22 | 96.7 |
| Msa1295920 | AT2G46270.3 | 32.281 | 285 | 127 | 12 | 111 | 355 | 69 | 327 | 5.41e-22 | 96.7 |
| Msa1295920 | AT2G46270.2 | 33.094 | 278 | 111 | 13 | 111 | 355 | 69 | 304 | 1.96e-21 | 94.7 |
| Msa1295920 | AT2G46270.4 | 33.094 | 278 | 111 | 13 | 111 | 355 | 69 | 304 | 1.96e-21 | 94.7 |
Find 121 sgRNAs with CRISPR-Local
Find 397 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCACTGTCACCACTGTTTA+AGG | 0.136768 | 8_3:-54354735 | None:intergenic |
| TGTTTCTAAGCTGATCTTTA+TGG | 0.175848 | 8_3:+54353432 | Msa1295920:CDS |
| CTCTTTCTTAGCTTTGGTTT+TGG | 0.213993 | 8_3:-54351673 | None:intergenic |
| CAAATTAAGTGTAAATTATA+AGG | 0.218769 | 8_3:-54356868 | None:intergenic |
| TTAATATTGGAATGGACTTA+TGG | 0.240590 | 8_3:+54355310 | Msa1295920:CDS |
| ATCTGAAAACGATTCTATTA+AGG | 0.259096 | 8_3:+54356334 | Msa1295920:CDS |
| ATGTTTGGATTGATTGTATA+GGG | 0.279382 | 8_3:+54357018 | Msa1295920:three_prime_UTR |
| GAAGTGTTTGGTTTGAATTT+AGG | 0.280233 | 8_3:+54351602 | Msa1295920:five_prime_UTR |
| CCTGCAACTAATCTTAATAT+TGG | 0.282424 | 8_3:+54355297 | Msa1295920:CDS |
| AGGTTGATTGTGTCTCATTT+TGG | 0.284919 | 8_3:-54355361 | None:intergenic |
| CAATTACAGTTGAAGATTAA+TGG | 0.290459 | 8_3:-54356844 | None:intergenic |
| TCCCTTCAAACTCTGTAGTT+TGG | 0.319818 | 8_3:-54354505 | None:intergenic |
| TTTGACCTCATGCTTGTTGA+TGG | 0.336878 | 8_3:+54355117 | Msa1295920:CDS |
| CACACACTCTTTCTTAGCTT+TGG | 0.342219 | 8_3:-54351679 | None:intergenic |
| TCACTACCTTAGGGCATGTT+TGG | 0.349131 | 8_3:+54357003 | Msa1295920:three_prime_UTR |
| GTTTCTAAGCTGATCTTTAT+GGG | 0.351598 | 8_3:+54353433 | Msa1295920:CDS |
| ATTAAGACAGTTCTGCAAAC+TGG | 0.356260 | 8_3:+54356742 | Msa1295920:three_prime_UTR |
| ACAAAAGAGGGTGGAGGCGC+TGG | 0.372335 | 8_3:+54356247 | Msa1295920:CDS |
| ATTTCTCAGTCATCTGTTCC+TGG | 0.375045 | 8_3:+54355255 | Msa1295920:CDS |
| GCCCCTGGAGCTGGTGCACT+TGG | 0.382891 | 8_3:+54355387 | Msa1295920:CDS |
| GCTTAGAAACACTGCCCTTT+CGG | 0.383213 | 8_3:-54353420 | None:intergenic |
| CCAATATTAAGATTAGTTGC+AGG | 0.386214 | 8_3:-54355297 | None:intergenic |
| TTTCTTAACGCCATGAAAAC+AGG | 0.400156 | 8_3:+54351756 | Msa1295920:exon |
| TCAAGGTTAGCAACTACTTC+AGG | 0.401006 | 8_3:-54356653 | None:intergenic |
| TTCCTCAGTGTCGGCTTTGG+TGG | 0.407471 | 8_3:+54356692 | Msa1295920:three_prime_UTR |
| AATCATCCTTTGTATTGTAT+AGG | 0.413955 | 8_3:+54353018 | Msa1295920:CDS |
| CAACCTGGTGCCCCTGGAGC+TGG | 0.416002 | 8_3:+54355378 | Msa1295920:CDS |
| AGGAACAGATGACTGAGAAA+TGG | 0.416041 | 8_3:-54355253 | None:intergenic |
| TGCATGGAGGTTGACCAATC+TGG | 0.418724 | 8_3:-54353628 | None:intergenic |
| TTCCCAGGAGGGTACATTGC+AGG | 0.419287 | 8_3:-54354236 | None:intergenic |
| TCACCAAGTGCACCAGCTCC+AGG | 0.421772 | 8_3:-54355390 | None:intergenic |
| CTGGTCTCTTAATTGAGAAT+AGG | 0.430322 | 8_3:+54356783 | Msa1295920:three_prime_UTR |
| ACTGTTGTTTGTTTCATTCA+AGG | 0.431117 | 8_3:-54356670 | None:intergenic |
| CATGTTTGGATTGATTGTAT+AGG | 0.433216 | 8_3:+54357017 | Msa1295920:three_prime_UTR |
| ATCGAGACAACAGGATTTCC+AGG | 0.434892 | 8_3:-54355273 | None:intergenic |
| GTTATAATTTGTACCTATGC+TGG | 0.439655 | 8_3:+54356890 | Msa1295920:three_prime_UTR |
| CACAATCAACCTGGTGCCCC+TGG | 0.439660 | 8_3:+54355372 | Msa1295920:CDS |
| CAGTTCCTCAGTGTCGGCTT+TGG | 0.446251 | 8_3:+54356689 | Msa1295920:three_prime_UTR |
| AAATTAAGTGTAAATTATAA+GGG | 0.448140 | 8_3:-54356867 | None:intergenic |
| GTGTTGAGTATTTATTTATG+TGG | 0.450298 | 8_3:-54351466 | None:intergenic |
| AGGGTGGAATGGAATACAAT+AGG | 0.457305 | 8_3:+54357037 | Msa1295920:three_prime_UTR |
| TTCCTTTAGTGGGAGATGAA+TGG | 0.457601 | 8_3:+54352994 | Msa1295920:intron |
| GTTGCAGGCATCGAGACAAC+AGG | 0.464141 | 8_3:-54355282 | None:intergenic |
| CAAAAGAGGGTGGAGGCGCT+GGG | 0.468781 | 8_3:+54356248 | Msa1295920:CDS |
| GTCCCGTATGGCGCCATCAT+AGG | 0.468831 | 8_3:-54354200 | None:intergenic |
| GCTGATCTTTATGGGGACTA+AGG | 0.469213 | 8_3:+54353441 | Msa1295920:CDS |
| TGCTAGCGATGAAAACCAAC+AGG | 0.473083 | 8_3:+54354775 | Msa1295920:CDS |
| GTAGTTTGGTGCATAGCACT+TGG | 0.475491 | 8_3:-54354491 | None:intergenic |
| TTATGGAATGCATCTTCTGC+TGG | 0.478101 | 8_3:+54355327 | Msa1295920:CDS |
| TATCCTGCAATGTACCCTCC+TGG | 0.485161 | 8_3:+54354233 | Msa1295920:CDS |
| AGTAGTATTGTTCTGCGCGT+TGG | 0.490521 | 8_3:-54355226 | None:intergenic |
| TACATTGCAGGATACGGAAC+TGG | 0.491024 | 8_3:-54354224 | None:intergenic |
| CATCCTTTGTATTGTATAGG+AGG | 0.493954 | 8_3:+54353021 | Msa1295920:CDS |
| GGATATGATGGTTGTACTGT+TGG | 0.495462 | 8_3:-54353607 | None:intergenic |
| GCACCAGCTCCAGGGGCACC+AGG | 0.496227 | 8_3:-54355381 | None:intergenic |
| CTTTGTATTGTATAGGAGGA+TGG | 0.498833 | 8_3:+54353025 | Msa1295920:CDS |
| ATTTCTTCAGCATCCTATGA+TGG | 0.501272 | 8_3:+54354187 | Msa1295920:intron |
| GGAACAGATGACTGAGAAAT+GGG | 0.502735 | 8_3:-54355252 | None:intergenic |
| TTTGTTTGTCTCATCCCACT+TGG | 0.505413 | 8_3:+54351715 | Msa1295920:five_prime_UTR |
| CATCCTATGATGGCGCCATA+CGG | 0.509674 | 8_3:+54354197 | Msa1295920:CDS |
| TAAAACATCTTCATCAACTC+AGG | 0.518814 | 8_3:+54353486 | Msa1295920:CDS |
| ATCCTATGATGGCGCCATAC+GGG | 0.519112 | 8_3:+54354198 | Msa1295920:CDS |
| AACGCGCAGAACAATACTAC+TGG | 0.528283 | 8_3:+54355228 | Msa1295920:CDS |
| GGAGGGTACATTGCAGGATA+CGG | 0.533311 | 8_3:-54354230 | None:intergenic |
| GGAATCAGCTAGAAACAAGA+AGG | 0.536581 | 8_3:+54355089 | Msa1295920:intron |
| ATCCTGCAATGTACCCTCCT+GGG | 0.538664 | 8_3:+54354234 | Msa1295920:CDS |
| TGACTAACCACTACCATGCT+AGG | 0.543160 | 8_3:-54354272 | None:intergenic |
| TACAACCATCATATCCAGAT+TGG | 0.544261 | 8_3:+54353614 | Msa1295920:CDS |
| CACCAAGTGCACCAGCTCCA+GGG | 0.545672 | 8_3:-54355389 | None:intergenic |
| TTGTTGTAAACAGGAAGAGT+TGG | 0.546447 | 8_3:+54356616 | Msa1295920:intron |
| TGCTCATCCTAGCATGGTAG+TGG | 0.548395 | 8_3:+54354265 | Msa1295920:CDS |
| CAGTGGTGACAGTGGTTCAG+AGG | 0.554290 | 8_3:+54354742 | Msa1295920:CDS |
| GATGGTTGTACTGTTGGTGT+TGG | 0.556241 | 8_3:-54353601 | None:intergenic |
| ATTAAGAATGAAAATTGAAG+AGG | 0.561617 | 8_3:-54354699 | None:intergenic |
| ACTAAATAGAAGTGCTTCAG+TGG | 0.564296 | 8_3:-54356930 | None:intergenic |
| ATCAATCCAAACATGCCCTA+AGG | 0.566506 | 8_3:-54357009 | None:intergenic |
| ATTGATTGTATAGGGTGGAA+TGG | 0.566764 | 8_3:+54357026 | Msa1295920:three_prime_UTR |
| GAAGAGTTGGAACGGTTGTG+TGG | 0.569549 | 8_3:+54356629 | Msa1295920:CDS |
| GTTGACCAATCTGGATATGA+TGG | 0.570626 | 8_3:-54353619 | None:intergenic |
| ACCAAGTGCACCAGCTCCAG+GGG | 0.573078 | 8_3:-54355388 | None:intergenic |
| AACGATCTCAAATAAACAAG+AGG | 0.575600 | 8_3:-54354665 | None:intergenic |
| AGATTGGTCAACCTCCATGC+AGG | 0.576648 | 8_3:+54353630 | Msa1295920:CDS |
| CATATGTTCCATTACCTGCA+TGG | 0.578688 | 8_3:-54353644 | None:intergenic |
| GGATGAGCATACATATTCCC+AGG | 0.579201 | 8_3:-54354251 | None:intergenic |
| GCGGTCAAGACTACGCAAGC+AGG | 0.579234 | 8_3:+54355669 | Msa1295920:CDS |
| TTTCTAAGCTGATCTTTATG+GGG | 0.579308 | 8_3:+54353434 | Msa1295920:CDS |
| AACTAATCTTAATATTGGAA+TGG | 0.579722 | 8_3:+54355302 | Msa1295920:CDS |
| AGTCTAATCGAGAGTCAGCT+AGG | 0.579925 | 8_3:+54355647 | Msa1295920:CDS |
| AGATATCAATACTTGATCAT+CGG | 0.587152 | 8_3:+54353380 | Msa1295920:CDS |
| TTTGGATTGATTGTATAGGG+TGG | 0.592670 | 8_3:+54357021 | Msa1295920:three_prime_UTR |
| AAGAGTTGGAACGGTTGTGT+GGG | 0.601166 | 8_3:+54356630 | Msa1295920:CDS |
| GTGTGAAGAGCTACAAAAGA+GGG | 0.605519 | 8_3:+54356235 | Msa1295920:CDS |
| AGTGGTGACAGTGGTTCAGA+GGG | 0.609578 | 8_3:+54354743 | Msa1295920:CDS |
| ACAATTATACGTTTACGACT+CGG | 0.616394 | 8_3:+54353082 | Msa1295920:CDS |
| AAGAGGGTGGAGGCGCTGGG+AGG | 0.616742 | 8_3:+54356251 | Msa1295920:CDS |
| CATATTCTATTCTCCAGCAT+AGG | 0.619694 | 8_3:-54356903 | None:intergenic |
| GAATCAGCTAGAAACAAGAA+GGG | 0.620018 | 8_3:+54355090 | Msa1295920:CDS |
| GATCTTTATGGGGACTAAGG+AGG | 0.620612 | 8_3:+54353444 | Msa1295920:CDS |
| TATGTATGCTCATCCTAGCA+TGG | 0.624800 | 8_3:+54354259 | Msa1295920:CDS |
| AAACAACAGTTCCTCAGTGT+CGG | 0.625553 | 8_3:+54356683 | Msa1295920:three_prime_UTR |
| TGCTGGAGAATAGAATATGT+AGG | 0.627024 | 8_3:+54356907 | Msa1295920:three_prime_UTR |
| TGAAGAGCTACAAAAGAGGG+TGG | 0.630738 | 8_3:+54356238 | Msa1295920:CDS |
| AGTGTGAAGAGCTACAAAAG+AGG | 0.632849 | 8_3:+54356234 | Msa1295920:CDS |
| CATCCTCCTATACAATACAA+AGG | 0.636241 | 8_3:-54353024 | None:intergenic |
| TCCTTAAACAGTGGTGACAG+TGG | 0.636548 | 8_3:+54354734 | Msa1295920:CDS |
| AGAGCTACAAAAGAGGGTGG+AGG | 0.641292 | 8_3:+54356241 | Msa1295920:CDS |
| CTGGTGCACTTGGTGAACAG+TGG | 0.647119 | 8_3:+54355397 | Msa1295920:CDS |
| GGATGAGGTGGAAGTCCAAG+TGG | 0.647844 | 8_3:-54351730 | None:intergenic |
| AACATAACACAAAATCCACA+AGG | 0.649143 | 8_3:+54351489 | Msa1295920:five_prime_UTR |
| AAAATGAGACACAATCAACC+TGG | 0.657620 | 8_3:+54355363 | Msa1295920:CDS |
| GTAAACAGGAAGAGTTGGAA+CGG | 0.658507 | 8_3:+54356621 | Msa1295920:intron |
| TCAAGTATTGATATCTGAGG+AGG | 0.659197 | 8_3:-54353373 | None:intergenic |
| TGATCAAGTATTGATATCTG+AGG | 0.675678 | 8_3:-54353376 | None:intergenic |
| GAGCATACATATTCCCAGGA+GGG | 0.682181 | 8_3:-54354247 | None:intergenic |
| GATGAGGTGGAAGTCCAAGT+GGG | 0.684584 | 8_3:-54351729 | None:intergenic |
| ACATACCATCAACAAGCATG+AGG | 0.688310 | 8_3:-54355122 | None:intergenic |
| ATGTTCCATTACCTGCATGG+AGG | 0.690307 | 8_3:-54353641 | None:intergenic |
| TGAGCATACATATTCCCAGG+AGG | 0.720547 | 8_3:-54354248 | None:intergenic |
| ACATAACACAAAATCCACAA+GGG | 0.727851 | 8_3:+54351490 | Msa1295920:five_prime_UTR |
| TGCCACCAAAGCCGACACTG+AGG | 0.737659 | 8_3:-54356694 | None:intergenic |
| CTAATCGAGAGTCAGCTAGG+CGG | 0.772559 | 8_3:+54355650 | Msa1295920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GGTAAAAATATAATTTAATA+CGG | - | chr8_3:54351566-54351585 | None:intergenic | 10.0% |
| !!! | TTTTTCTTTTTTCATATATT+TGG | + | chr8_3:54351924-54351943 | Msa1295920:intron | 10.0% |
| !!! | TTTTCTTTTTTCATATATTT+GGG | + | chr8_3:54351925-54351944 | Msa1295920:intron | 10.0% |
| !! | AATCAAAAAAGAAAATTAAT+TGG | + | chr8_3:54352120-54352139 | Msa1295920:intron | 10.0% |
| !! | GATACAATTAATTAATTATA+TGG | + | chr8_3:54352385-54352404 | Msa1295920:intron | 10.0% |
| !!! | AAAAGAAAAATAATTGTTTT+GGG | - | chr8_3:54352555-54352574 | None:intergenic | 10.0% |
| !!! | TATATATTTTCTTATCATTT+CGG | + | chr8_3:54353559-54353578 | Msa1295920:intron | 10.0% |
| !!! | TATATTTTTATATGTTGTTT+AGG | + | chr8_3:54355798-54355817 | Msa1295920:intron | 10.0% |
| !! | AAATTAAGTGTAAATTATAA+GGG | - | chr8_3:54356870-54356889 | None:intergenic | 10.0% |
| !!! | TTTTTACATATACCTTTTTA+GGG | + | chr8_3:54351874-54351893 | Msa1295920:intron | 15.0% |
| !! | AAATAAAGAAAATTGACTAA+GGG | - | chr8_3:54351952-54351971 | None:intergenic | 15.0% |
| !!! | TTTATTTAAGTTTCTGATTA+TGG | + | chr8_3:54352036-54352055 | Msa1295920:intron | 15.0% |
| !!! | ATTATTATTTTTTTGGCTTT+TGG | + | chr8_3:54352074-54352093 | Msa1295920:intron | 15.0% |
| !!! | TTATTATTTTTTTGGCTTTT+GGG | + | chr8_3:54352075-54352094 | Msa1295920:intron | 15.0% |
| !! | ACAATTATAATTATCTTCTT+TGG | - | chr8_3:54352512-54352531 | None:intergenic | 15.0% |
| !! | GAAGATAATTATAATTGTAT+AGG | + | chr8_3:54352514-54352533 | Msa1295920:intron | 15.0% |
| !! | TTGTATAGGTTATATTAAAA+TGG | + | chr8_3:54352528-54352547 | Msa1295920:intron | 15.0% |
| !!! | CAAAAGAAAAATAATTGTTT+TGG | - | chr8_3:54352556-54352575 | None:intergenic | 15.0% |
| !!! | CAAAACAATTATTTTTCTTT+TGG | + | chr8_3:54352554-54352573 | Msa1295920:intron | 15.0% |
| !!! | CTTTTGAAAACAATTAATAA+TGG | + | chr8_3:54352801-54352820 | Msa1295920:intron | 15.0% |
| !!! | AATCTTACTAATTTTGATTA+TGG | - | chr8_3:54353128-54353147 | None:intergenic | 15.0% |
| !! | ATGCAAAATTATAAACTAAA+TGG | - | chr8_3:54353219-54353238 | None:intergenic | 15.0% |
| !! | AAATCGTATATGAATATATT+AGG | - | chr8_3:54353518-54353537 | None:intergenic | 15.0% |
| !! | TGATAAGAAAATATATATGA+GGG | - | chr8_3:54353556-54353575 | None:intergenic | 15.0% |
| !! | ATGATAAGAAAATATATATG+AGG | - | chr8_3:54353557-54353576 | None:intergenic | 15.0% |
| !!! | TTTTTTTCTCAAATTATTAC+CGG | - | chr8_3:54354880-54354899 | None:intergenic | 15.0% |
| !!! | AATAAAGCTTTAGATTTAAA+TGG | + | chr8_3:54356064-54356083 | Msa1295920:intron | 15.0% |
| !!! | TTTTCAGATAATTCAATTTA+AGG | - | chr8_3:54356592-54356611 | None:intergenic | 15.0% |
| !! | CAAATTAAGTGTAAATTATA+AGG | - | chr8_3:54356871-54356890 | None:intergenic | 15.0% |
| !!! | CTTTTTACATATACCTTTTT+AGG | + | chr8_3:54351873-54351892 | Msa1295920:intron | 20.0% |
| !! | AAAATAAAAGAATGAAGCAT+TGG | - | chr8_3:54351908-54351927 | None:intergenic | 20.0% |
| !! | CAAATAAAGAAAATTGACTA+AGG | - | chr8_3:54351953-54351972 | None:intergenic | 20.0% |
| !!! | TATTATTTTTTTGGCTTTTG+GGG | + | chr8_3:54352076-54352095 | Msa1295920:intron | 20.0% |
| !! | CAAAAAAGAAAATTAATTGG+AGG | + | chr8_3:54352123-54352142 | Msa1295920:intron | 20.0% |
| !!! | ATTTTACCAAGATTTTGATA+TGG | + | chr8_3:54352184-54352203 | Msa1295920:intron | 20.0% |
| !!! | AAATTTTGCTGTGATTTTTT+AGG | + | chr8_3:54352335-54352354 | Msa1295920:intron | 20.0% |
| !! | TGTATTGAAGAGAAAAATAA+GGG | + | chr8_3:54352358-54352377 | Msa1295920:intron | 20.0% |
| !!! | TTATTTTTCTTTTGGAAACT+TGG | + | chr8_3:54352562-54352581 | Msa1295920:intron | 20.0% |
| !!! | TTTGCATTAGATTTTATAGT+TGG | + | chr8_3:54353232-54353251 | Msa1295920:intron | 20.0% |
| !! | TTATAAAAATAAGCTGAACA+TGG | + | chr8_3:54353876-54353895 | Msa1295920:intron | 20.0% |
| !! | CTAGCAAAATGATAAAAATA+AGG | - | chr8_3:54354468-54354487 | None:intergenic | 20.0% |
| !! | ATTAAGAATGAAAATTGAAG+AGG | - | chr8_3:54354702-54354721 | None:intergenic | 20.0% |
| !!! | AATTTTATATCCTTAAACAG+TGG | + | chr8_3:54354725-54354744 | Msa1295920:CDS | 20.0% |
| !!! | AAGTATCTTTTTTTTTTTCG+CGG | + | chr8_3:54355165-54355184 | Msa1295920:intron | 20.0% |
| !! | AACTAATCTTAATATTGGAA+TGG | + | chr8_3:54355302-54355321 | Msa1295920:CDS | 20.0% |
| !! | TGAATAATATAACTCATACT+TGG | - | chr8_3:54355776-54355795 | None:intergenic | 20.0% |
| !! | AAGATATAAAAGACCTAATA+AGG | + | chr8_3:54355832-54355851 | Msa1295920:intron | 20.0% |
| !! | GAAAAAAAATTGTTGTAAAC+AGG | + | chr8_3:54356607-54356626 | Msa1295920:intron | 20.0% |
| ! | GTGTTGAGTATTTATTTATG+TGG | - | chr8_3:54351469-54351488 | None:intergenic | 25.0% |
| !!! | ACTTCTTGTTTTTGTGTTTA+AGG | - | chr8_3:54351587-54351606 | None:intergenic | 25.0% |
| ! | TTAAGAGAAGAGAGAAAATA+GGG | - | chr8_3:54351787-54351806 | None:intergenic | 25.0% |
| ! | ATTAAGAGAAGAGAGAAAAT+AGG | - | chr8_3:54351788-54351807 | None:intergenic | 25.0% |
| ! | CTCTAATTAAGCATATGATA+AGG | - | chr8_3:54351839-54351858 | None:intergenic | 25.0% |
| !! | CTTTATTTGTTTGCTAGAAA+AGG | + | chr8_3:54351964-54351983 | Msa1295920:intron | 25.0% |
| !!! | ATTATTTTTTTGGCTTTTGG+GGG | + | chr8_3:54352077-54352096 | Msa1295920:intron | 25.0% |
| ! | AAAAGAAAATTAATTGGAGG+AGG | + | chr8_3:54352126-54352145 | Msa1295920:intron | 25.0% |
| ! | CAAATACCATATCAAAATCT+TGG | - | chr8_3:54352193-54352212 | None:intergenic | 25.0% |
| !!! | CAAGATTTTGATATGGTATT+TGG | + | chr8_3:54352191-54352210 | Msa1295920:intron | 25.0% |
| ! | TATAATAAACTTACACGCAA+AGG | + | chr8_3:54352309-54352328 | Msa1295920:intron | 25.0% |
| ! | GTGTATTGAAGAGAAAAATA+AGG | + | chr8_3:54352357-54352376 | Msa1295920:intron | 25.0% |
| ! | GTATTGAAGAGAAAAATAAG+GGG | + | chr8_3:54352359-54352378 | Msa1295920:intron | 25.0% |
| ! | TGTACTTTCAAAAAGTTAGT+AGG | + | chr8_3:54352438-54352457 | Msa1295920:intron | 25.0% |
| ! | AATCATCCTTTGTATTGTAT+AGG | + | chr8_3:54353018-54353037 | Msa1295920:CDS | 25.0% |
| ! | TTTAACTACATACTTTGTAG+AGG | - | chr8_3:54353178-54353197 | None:intergenic | 25.0% |
| ! | AGATATCAATACTTGATCAT+CGG | + | chr8_3:54353380-54353399 | Msa1295920:CDS | 25.0% |
| ! | AGACAAACTATAATTCTGTT+TGG | + | chr8_3:54353709-54353728 | Msa1295920:intron | 25.0% |
| !!! | GCTATTTTTATAAGCTATTC+CGG | + | chr8_3:54353848-54353867 | Msa1295920:intron | 25.0% |
| ! | TAGTCATCAGTTACATAATA+GGG | - | chr8_3:54353985-54354004 | None:intergenic | 25.0% |
| ! | GCAATTATTATACTCTATGT+CGG | + | chr8_3:54354137-54354156 | Msa1295920:intron | 25.0% |
| !! | TGATGTATTAACATTTTTCC+AGG | + | chr8_3:54354369-54354388 | Msa1295920:intron | 25.0% |
| ! | TTGAATGTAAATGCATTTGT+CGG | + | chr8_3:54354908-54354927 | Msa1295920:intron | 25.0% |
| ! | CAAAAATACATACAGAAAAC+TGG | - | chr8_3:54355046-54355065 | None:intergenic | 25.0% |
| !! | CAGTTTTCTGTATGTATTTT+TGG | + | chr8_3:54355044-54355063 | Msa1295920:intron | 25.0% |
| ! | AAAAAGATACTTACGATTAC+AGG | - | chr8_3:54355157-54355176 | None:intergenic | 25.0% |
| !! | TTAATATTGGAATGGACTTA+TGG | + | chr8_3:54355310-54355329 | Msa1295920:CDS | 25.0% |
| ! | TTTCGATCTTTGTGTTTATA+TGG | + | chr8_3:54355490-54355509 | Msa1295920:intron | 25.0% |
| ! | TAATTAATGAACCACTAACT+TGG | - | chr8_3:54355741-54355760 | None:intergenic | 25.0% |
| ! | AGACAAAATTTATAATCCTG+AGG | + | chr8_3:54356096-54356115 | Msa1295920:intron | 25.0% |
| !! | TAATGTTGACTACATAGTTT+AGG | - | chr8_3:54356132-54356151 | None:intergenic | 25.0% |
| ! | TGCAAAACACATTAGTAAAA+TGG | - | chr8_3:54356193-54356212 | None:intergenic | 25.0% |
| ! | ATCTGAAAACGATTCTATTA+AGG | + | chr8_3:54356334-54356353 | Msa1295920:CDS | 25.0% |
| ! | TGAGTTGTATATATATGACA+AGG | - | chr8_3:54356566-54356585 | None:intergenic | 25.0% |
| ! | CAATTACAGTTGAAGATTAA+TGG | - | chr8_3:54356847-54356866 | None:intergenic | 25.0% |
| ! | GGTAGTGAAAATCAAAAAAT+TGG | - | chr8_3:54356991-54357010 | None:intergenic | 25.0% |
| !!! | TTTTTGATTTTCACTACCTT+AGG | + | chr8_3:54356993-54357012 | Msa1295920:three_prime_UTR | 25.0% |
| !!! | TTTTGATTTTCACTACCTTA+GGG | + | chr8_3:54356994-54357013 | Msa1295920:three_prime_UTR | 25.0% |
| ! | ATGTTTGGATTGATTGTATA+GGG | + | chr8_3:54357018-54357037 | Msa1295920:three_prime_UTR | 25.0% |
| AACATAACACAAAATCCACA+AGG | + | chr8_3:54351489-54351508 | Msa1295920:five_prime_UTR | 30.0% | |
| ACATAACACAAAATCCACAA+GGG | + | chr8_3:54351490-54351509 | Msa1295920:five_prime_UTR | 30.0% | |
| !!! | TTTTTTTTCTACAACCCTTG+TGG | - | chr8_3:54351507-54351526 | None:intergenic | 30.0% |
| !! | ACACAAAAACAAGAAGTGTT+TGG | + | chr8_3:54351590-54351609 | Msa1295920:five_prime_UTR | 30.0% |
| !! | GAAGTGTTTGGTTTGAATTT+AGG | + | chr8_3:54351602-54351621 | Msa1295920:five_prime_UTR | 30.0% |
| TTTCATGGCGTTAAGAAAAA+AGG | - | chr8_3:54351754-54351773 | None:intergenic | 30.0% | |
| AAAATGGATCTTGCAGAAAT+TGG | - | chr8_3:54351812-54351831 | None:intergenic | 30.0% | |
| ! | ATTTCTGCAAGATCCATTTT+TGG | + | chr8_3:54351812-54351831 | Msa1295920:intron | 30.0% |
| CATATGATAAGGTCCAAAAA+TGG | - | chr8_3:54351828-54351847 | None:intergenic | 30.0% | |
| GTGCTTAATTATACTTGCTT+AGG | + | chr8_3:54352157-54352176 | Msa1295920:intron | 30.0% | |
| ATATGGTATTTGGTTGAAGT+AGG | + | chr8_3:54352201-54352220 | Msa1295920:intron | 30.0% | |
| ! | TATTTGGTTGAAGTAGGTTT+TGG | + | chr8_3:54352207-54352226 | Msa1295920:intron | 30.0% |
| ! | ATTTGGTTGAAGTAGGTTTT+GGG | + | chr8_3:54352208-54352227 | Msa1295920:intron | 30.0% |
| TTGGTTCATTGATCTAAAAG+AGG | + | chr8_3:54352236-54352255 | Msa1295920:intron | 30.0% | |
| TCATTGATCTAAAAGAGGAA+AGG | + | chr8_3:54352241-54352260 | Msa1295920:intron | 30.0% | |
| ATGACAAGATTAGTAGTTGA+TGG | + | chr8_3:54352472-54352491 | Msa1295920:intron | 30.0% | |
| ! | TCAAAAGACAGTTGTGTTTT+GGG | - | chr8_3:54352788-54352807 | None:intergenic | 30.0% |
| ! | TTCAAAAGACAGTTGTGTTT+TGG | - | chr8_3:54352789-54352808 | None:intergenic | 30.0% |
| TGTTATATGTCTTCCTTTAG+TGG | + | chr8_3:54352983-54353002 | Msa1295920:intron | 30.0% | |
| GTTATATGTCTTCCTTTAGT+GGG | + | chr8_3:54352984-54353003 | Msa1295920:intron | 30.0% | |
| ACAATTATACGTTTACGACT+CGG | + | chr8_3:54353082-54353101 | Msa1295920:CDS | 30.0% | |
| TCAAATAGTAGCAACTATCA+AGG | - | chr8_3:54353261-54353280 | None:intergenic | 30.0% | |
| !! | TGATCAAGTATTGATATCTG+AGG | - | chr8_3:54353379-54353398 | None:intergenic | 30.0% |
| ! | TGTTTCTAAGCTGATCTTTA+TGG | + | chr8_3:54353432-54353451 | Msa1295920:CDS | 30.0% |
| GTTTCTAAGCTGATCTTTAT+GGG | + | chr8_3:54353433-54353452 | Msa1295920:CDS | 30.0% | |
| TTTCTAAGCTGATCTTTATG+GGG | + | chr8_3:54353434-54353453 | Msa1295920:CDS | 30.0% | |
| !! | GTTGATGAAGATGTTTTAGA+AGG | - | chr8_3:54353484-54353503 | None:intergenic | 30.0% |
| TAAAACATCTTCATCAACTC+AGG | + | chr8_3:54353486-54353505 | Msa1295920:CDS | 30.0% | |
| !!! | GCTTATTTTTATAAGCTCTC+CGG | - | chr8_3:54353870-54353889 | None:intergenic | 30.0% |
| CTAGTCATCAGTTACATAAT+AGG | - | chr8_3:54353986-54354005 | None:intergenic | 30.0% | |
| CTATTATGTAACTGATGACT+AGG | + | chr8_3:54353984-54354003 | Msa1295920:intron | 30.0% | |
| ! | TGATGACTAGGTTCTTATTT+AGG | + | chr8_3:54353996-54354015 | Msa1295920:intron | 30.0% |
| GTAAATGTTGTCCATCATTT+AGG | + | chr8_3:54354108-54354127 | Msa1295920:intron | 30.0% | |
| ATTGCATACATCCTAAATGA+TGG | - | chr8_3:54354122-54354141 | None:intergenic | 30.0% | |
| ATACATCATGTATAAGCAGA+TGG | - | chr8_3:54354357-54354376 | None:intergenic | 30.0% | |
| TTGCCACGTTTATCAAAATT+TGG | + | chr8_3:54354400-54354419 | Msa1295920:intron | 30.0% | |
| !! | ATGCCAAATTTTGATAAACG+TGG | - | chr8_3:54354406-54354425 | None:intergenic | 30.0% |
| GATTCATCTAAAAAACCGAA+GGG | + | chr8_3:54354551-54354570 | Msa1295920:intron | 30.0% | |
| AACGATCTCAAATAAACAAG+AGG | - | chr8_3:54354668-54354687 | None:intergenic | 30.0% | |
| AAGACACATACTCATATTGA+AGG | - | chr8_3:54354969-54354988 | None:intergenic | 30.0% | |
| ! | CCAATATTAAGATTAGTTGC+AGG | - | chr8_3:54355300-54355319 | None:intergenic | 30.0% |
| CCTGCAACTAATCTTAATAT+TGG | + | chr8_3:54355297-54355316 | Msa1295920:CDS | 30.0% | |
| AAGGAAGTTATACAAAGGTA+AGG | - | chr8_3:54355564-54355583 | None:intergenic | 30.0% | |
| TGTTGAAGGAAGTTATACAA+AGG | - | chr8_3:54355569-54355588 | None:intergenic | 30.0% | |
| !! | GTAAGCTTTGGAAATATACT+TGG | + | chr8_3:54355691-54355710 | Msa1295920:intron | 30.0% |
| GTAGACAACCAGTAAATTTA+AGG | - | chr8_3:54356381-54356400 | None:intergenic | 30.0% | |
| ! | ACTGTTGTTTGTTTCATTCA+AGG | - | chr8_3:54356673-54356692 | None:intergenic | 30.0% |
| ! | GTTATAATTTGTACCTATGC+TGG | + | chr8_3:54356890-54356909 | Msa1295920:three_prime_UTR | 30.0% |
| CATGTTTGGATTGATTGTAT+AGG | + | chr8_3:54357017-54357036 | Msa1295920:three_prime_UTR | 30.0% | |
| !!! | TTGTGCTGTTTGTTTTCTAG+TGG | - | chr8_3:54351640-54351659 | None:intergenic | 35.0% |
| !!! | CTCTTTCTTAGCTTTGGTTT+TGG | - | chr8_3:54351676-54351695 | None:intergenic | 35.0% |
| GTTAAGAAAAAAGGATGAGG+TGG | - | chr8_3:54351745-54351764 | None:intergenic | 35.0% | |
| TTTCTTAACGCCATGAAAAC+AGG | + | chr8_3:54351756-54351775 | Msa1295920:exon | 35.0% | |
| TTGGTGTATACACCCTAAAA+AGG | - | chr8_3:54351889-54351908 | None:intergenic | 35.0% | |
| !!! | AAGTAGGTTTTGGGTTTGTT+TGG | + | chr8_3:54352217-54352236 | Msa1295920:intron | 35.0% |
| TAGAAACTTAGCATCTTCTG+TGG | + | chr8_3:54352282-54352301 | Msa1295920:intron | 35.0% | |
| !! | AAGATTAGTAGTTGATGGCA+TGG | + | chr8_3:54352477-54352496 | Msa1295920:intron | 35.0% |
| ! | ACTTTGCTCTAGCTTCAATT+GGG | - | chr8_3:54352647-54352666 | None:intergenic | 35.0% |
| GTCTCAGGTTCAAAAACTAA+TGG | - | chr8_3:54352706-54352725 | None:intergenic | 35.0% | |
| CATCCTTTGTATTGTATAGG+AGG | + | chr8_3:54353021-54353040 | Msa1295920:CDS | 35.0% | |
| CATCCTCCTATACAATACAA+AGG | - | chr8_3:54353027-54353046 | None:intergenic | 35.0% | |
| CTTTGTATTGTATAGGAGGA+TGG | + | chr8_3:54353025-54353044 | Msa1295920:CDS | 35.0% | |
| !! | TCGGTATTTGAAGTCGTTTT+TGG | + | chr8_3:54353101-54353120 | Msa1295920:intron | 35.0% |
| !! | TCAAGTATTGATATCTGAGG+AGG | - | chr8_3:54353376-54353395 | None:intergenic | 35.0% |
| ! | TGATCATCGGTCTTTTTGTT+TGG | + | chr8_3:54353393-54353412 | Msa1295920:CDS | 35.0% |
| TACAACCATCATATCCAGAT+TGG | + | chr8_3:54353614-54353633 | Msa1295920:CDS | 35.0% | |
| ATTTAGGCCTACTATAATCC+TGG | + | chr8_3:54354012-54354031 | Msa1295920:intron | 35.0% | |
| !! | AATGATGGACAACATTTACC+TGG | - | chr8_3:54354107-54354126 | None:intergenic | 35.0% |
| ATTTCTTCAGCATCCTATGA+TGG | + | chr8_3:54354187-54354206 | Msa1295920:intron | 35.0% | |
| ACCAAACTACAGAGTTTGAA+GGG | + | chr8_3:54354504-54354523 | Msa1295920:intron | 35.0% | |
| GGATTCATCTAAAAAACCGA+AGG | + | chr8_3:54354550-54354569 | Msa1295920:intron | 35.0% | |
| GTAATCTGTCATATACCTGT+TGG | - | chr8_3:54354793-54354812 | None:intergenic | 35.0% | |
| TTCTCAAATTATTACCGGTG+TGG | - | chr8_3:54354875-54354894 | None:intergenic | 35.0% | |
| TGGTCTAATGACTTCTATCT+TGG | + | chr8_3:54355064-54355083 | Msa1295920:intron | 35.0% | |
| CTAATGACTTCTATCTTGGT+AGG | + | chr8_3:54355068-54355087 | Msa1295920:intron | 35.0% | |
| GAATCAGCTAGAAACAAGAA+GGG | + | chr8_3:54355090-54355109 | Msa1295920:CDS | 35.0% | |
| TTAGTGTTTCCATGAACTTC+AGG | + | chr8_3:54355201-54355220 | Msa1295920:intron | 35.0% | |
| ! | TTGATTGTGTCTCATTTTGG+CGG | - | chr8_3:54355361-54355380 | None:intergenic | 35.0% |
| !! | AGGTTGATTGTGTCTCATTT+TGG | - | chr8_3:54355364-54355383 | None:intergenic | 35.0% |
| AAAATGAGACACAATCAACC+TGG | + | chr8_3:54355363-54355382 | Msa1295920:CDS | 35.0% | |
| CTATCAAGATCAGACACATT+AGG | - | chr8_3:54355593-54355612 | None:intergenic | 35.0% | |
| CTAATGTGTCTGATCTTGAT+AGG | + | chr8_3:54355591-54355610 | Msa1295920:intron | 35.0% | |
| TTTAGGTGTCAAATAACCTC+AGG | - | chr8_3:54356115-54356134 | None:intergenic | 35.0% | |
| TTGCATTTCTTGTACCAACT+AGG | + | chr8_3:54356208-54356227 | Msa1295920:intron | 35.0% | |
| ! | CCAGTAAATTTAAGGCAGAA+TGG | - | chr8_3:54356373-54356392 | None:intergenic | 35.0% |
| CCATTCTGCCTTAAATTTAC+TGG | + | chr8_3:54356370-54356389 | Msa1295920:intron | 35.0% | |
| ! | ACACATTCAATCTGAAGTGT+CGG | + | chr8_3:54356515-54356534 | Msa1295920:intron | 35.0% |
| TTGTTGTAAACAGGAAGAGT+TGG | + | chr8_3:54356616-54356635 | Msa1295920:intron | 35.0% | |
| ATTAAGACAGTTCTGCAAAC+TGG | + | chr8_3:54356742-54356761 | Msa1295920:three_prime_UTR | 35.0% | |
| ! | AACTGGACTTTTCAAATCAG+TGG | + | chr8_3:54356759-54356778 | Msa1295920:three_prime_UTR | 35.0% |
| CTGGTCTCTTAATTGAGAAT+AGG | + | chr8_3:54356783-54356802 | Msa1295920:three_prime_UTR | 35.0% | |
| CATATTCTATTCTCCAGCAT+AGG | - | chr8_3:54356906-54356925 | None:intergenic | 35.0% | |
| TGCTGGAGAATAGAATATGT+AGG | + | chr8_3:54356907-54356926 | Msa1295920:three_prime_UTR | 35.0% | |
| !! | ACTAAATAGAAGTGCTTCAG+TGG | - | chr8_3:54356933-54356952 | None:intergenic | 35.0% |
| TTTGGATTGATTGTATAGGG+TGG | + | chr8_3:54357021-54357040 | Msa1295920:three_prime_UTR | 35.0% | |
| ATTGATTGTATAGGGTGGAA+TGG | + | chr8_3:54357026-54357045 | Msa1295920:three_prime_UTR | 35.0% | |
| CACACACTCTTTCTTAGCTT+TGG | - | chr8_3:54351682-54351701 | None:intergenic | 40.0% | |
| TTTGTTTGTCTCATCCCACT+TGG | + | chr8_3:54351715-54351734 | Msa1295920:five_prime_UTR | 40.0% | |
| GGCGTTAAGAAAAAAGGATG+AGG | - | chr8_3:54351748-54351767 | None:intergenic | 40.0% | |
| CACGAGTACCAACTAATCTA+GGG | + | chr8_3:54352592-54352611 | Msa1295920:intron | 40.0% | |
| ACGAGTACCAACTAATCTAG+GGG | + | chr8_3:54352593-54352612 | Msa1295920:intron | 40.0% | |
| ! | GACTTTGCTCTAGCTTCAAT+TGG | - | chr8_3:54352648-54352667 | None:intergenic | 40.0% |
| !! | TTGTGTTTTGGGTCAACCTA+GGG | - | chr8_3:54352777-54352796 | None:intergenic | 40.0% |
| TTCCTTTAGTGGGAGATGAA+TGG | + | chr8_3:54352994-54353013 | Msa1295920:intron | 40.0% | |
| TTCCATTCATCTCCCACTAA+AGG | - | chr8_3:54352999-54353018 | None:intergenic | 40.0% | |
| !!! | TTTTTGTTTGGTGCACCGAA+AGG | + | chr8_3:54353405-54353424 | Msa1295920:CDS | 40.0% |
| !!! | TTTTGTTTGGTGCACCGAAA+GGG | + | chr8_3:54353406-54353425 | Msa1295920:CDS | 40.0% |
| ! | TCATTTCGGTTTGCACAAAC+AGG | + | chr8_3:54353573-54353592 | Msa1295920:intron | 40.0% |
| GGATATGATGGTTGTACTGT+TGG | - | chr8_3:54353610-54353629 | None:intergenic | 40.0% | |
| GTTGACCAATCTGGATATGA+TGG | - | chr8_3:54353622-54353641 | None:intergenic | 40.0% | |
| CATATGTTCCATTACCTGCA+TGG | - | chr8_3:54353647-54353666 | None:intergenic | 40.0% | |
| AAGCACTTGTGTGACTGTTT+GGG | - | chr8_3:54353923-54353942 | None:intergenic | 40.0% | |
| TAAGCACTTGTGTGACTGTT+TGG | - | chr8_3:54353924-54353943 | None:intergenic | 40.0% | |
| GCAACAGTTGAGGCATAATA+GGG | - | chr8_3:54354051-54354070 | None:intergenic | 40.0% | |
| AGCAACAGTTGAGGCATAAT+AGG | - | chr8_3:54354052-54354071 | None:intergenic | 40.0% | |
| AACTCCGCATCCTTATATGT+GGG | + | chr8_3:54354077-54354096 | Msa1295920:intron | 40.0% | |
| TATGTATGCTCATCCTAGCA+TGG | + | chr8_3:54354259-54354278 | Msa1295920:CDS | 40.0% | |
| CACCAAACTACAGAGTTTGA+AGG | + | chr8_3:54354503-54354522 | Msa1295920:intron | 40.0% | |
| TCCCTTCAAACTCTGTAGTT+TGG | - | chr8_3:54354508-54354527 | None:intergenic | 40.0% | |
| AACTACAGAGTTTGAAGGGA+AGG | + | chr8_3:54354508-54354527 | Msa1295920:intron | 40.0% | |
| ACTACAGAGTTTGAAGGGAA+GGG | + | chr8_3:54354509-54354528 | Msa1295920:intron | 40.0% | |
| GAATCCTTATCCTTTCCATC+AGG | - | chr8_3:54354536-54354555 | None:intergenic | 40.0% | |
| ! | GCAATGATGGCTTTTCACAT+AGG | + | chr8_3:54354633-54354652 | Msa1295920:intron | 40.0% |
| ! | GATGGCTTTTCACATAGGTT+TGG | + | chr8_3:54354638-54354657 | Msa1295920:intron | 40.0% |
| ! | AATGAGAGCACATGTAACGA+TGG | - | chr8_3:54354815-54354834 | None:intergenic | 40.0% |
| GGAATCAGCTAGAAACAAGA+AGG | + | chr8_3:54355089-54355108 | Msa1295920:intron | 40.0% | |
| ! | TTTGACCTCATGCTTGTTGA+TGG | + | chr8_3:54355117-54355136 | Msa1295920:CDS | 40.0% |
| ACATACCATCAACAAGCATG+AGG | - | chr8_3:54355125-54355144 | None:intergenic | 40.0% | |
| GATACTTACGATTACAGGTG+AGG | - | chr8_3:54355152-54355171 | None:intergenic | 40.0% | |
| GGAACAGATGACTGAGAAAT+GGG | - | chr8_3:54355255-54355274 | None:intergenic | 40.0% | |
| AGGAACAGATGACTGAGAAA+TGG | - | chr8_3:54355256-54355275 | None:intergenic | 40.0% | |
| ATTTCTCAGTCATCTGTTCC+TGG | + | chr8_3:54355255-54355274 | Msa1295920:CDS | 40.0% | |
| TTATGGAATGCATCTTCTGC+TGG | + | chr8_3:54355327-54355346 | Msa1295920:CDS | 40.0% | |
| AACAGTGGATGCAACAAGTA+TGG | + | chr8_3:54355412-54355431 | Msa1295920:intron | 40.0% | |
| TGTTCTGTTCTCGTATTGCT+CGG | + | chr8_3:54355460-54355479 | Msa1295920:intron | 40.0% | |
| CAGACACATTAGGATGTTGA+AGG | - | chr8_3:54355583-54355602 | None:intergenic | 40.0% | |
| ! | ATATACTTGGTTCTCCCTTG+AGG | + | chr8_3:54355704-54355723 | Msa1295920:intron | 40.0% |
| ATAACACTGAGCCAAGTTAG+TGG | + | chr8_3:54355727-54355746 | Msa1295920:intron | 40.0% | |
| TCGGATCTACTCTCCTTATT+AGG | - | chr8_3:54355848-54355867 | None:intergenic | 40.0% | |
| TACATGATCTGGGTTGCTAT+CGG | - | chr8_3:54355867-54355886 | None:intergenic | 40.0% | |
| TGGATGGCTATACATGATCT+GGG | - | chr8_3:54355877-54355896 | None:intergenic | 40.0% | |
| TTGGATGGCTATACATGATC+TGG | - | chr8_3:54355878-54355897 | None:intergenic | 40.0% | |
| ATCATGTATAGCCATCCAAC+TGG | + | chr8_3:54355879-54355898 | Msa1295920:intron | 40.0% | |
| ! | TACAACTACTGGGATTTTCC+TGG | - | chr8_3:54355906-54355925 | None:intergenic | 40.0% |
| TGCAGTTCGATACAACTACT+GGG | - | chr8_3:54355916-54355935 | None:intergenic | 40.0% | |
| TTGCAGTTCGATACAACTAC+TGG | - | chr8_3:54355917-54355936 | None:intergenic | 40.0% | |
| CAACATTGATCCAACAACTG+AGG | + | chr8_3:54355934-54355953 | Msa1295920:intron | 40.0% | |
| TTGATCCAACAACTGAGGTT+TGG | + | chr8_3:54355939-54355958 | Msa1295920:intron | 40.0% | |
| !! | GTTTGGTTGGACTAGTTAGA+TGG | + | chr8_3:54355956-54355975 | Msa1295920:intron | 40.0% |
| TTTCCTGTTGGACAACTACA+GGG | - | chr8_3:54356028-54356047 | None:intergenic | 40.0% | |
| TAGTTGTCCAACAGGAAACT+AGG | + | chr8_3:54356030-54356049 | Msa1295920:intron | 40.0% | |
| AGTTTGACCTAGTTTCCTGT+TGG | - | chr8_3:54356040-54356059 | None:intergenic | 40.0% | |
| AGTGTGAAGAGCTACAAAAG+AGG | + | chr8_3:54356234-54356253 | Msa1295920:CDS | 40.0% | |
| GTGTGAAGAGCTACAAAAGA+GGG | + | chr8_3:54356235-54356254 | Msa1295920:CDS | 40.0% | |
| CTTCAGATTGAATGTGTGTC+CGG | - | chr8_3:54356512-54356531 | None:intergenic | 40.0% | |
| GTAAACAGGAAGAGTTGGAA+CGG | + | chr8_3:54356621-54356640 | Msa1295920:intron | 40.0% | |
| TCAAGGTTAGCAACTACTTC+AGG | - | chr8_3:54356656-54356675 | None:intergenic | 40.0% | |
| AAACAACAGTTCCTCAGTGT+CGG | + | chr8_3:54356683-54356702 | Msa1295920:three_prime_UTR | 40.0% | |
| ! | GACTTTTCAAATCAGTGGAC+TGG | + | chr8_3:54356764-54356783 | Msa1295920:three_prime_UTR | 40.0% |
| ATCAATCCAAACATGCCCTA+AGG | - | chr8_3:54357012-54357031 | None:intergenic | 40.0% | |
| AGGGTGGAATGGAATACAAT+AGG | + | chr8_3:54357037-54357056 | Msa1295920:three_prime_UTR | 40.0% | |
| ! | TAGGGACTGACCTGTTTTCA+TGG | - | chr8_3:54351769-54351788 | None:intergenic | 45.0% |
| ! | AGATTAGTTGGTACTCGTGC+TGG | - | chr8_3:54352591-54352610 | None:intergenic | 45.0% |
| GCACGAGTACCAACTAATCT+AGG | + | chr8_3:54352591-54352610 | Msa1295920:intron | 45.0% | |
| GACTGATCCCCTAGATTAGT+TGG | - | chr8_3:54352603-54352622 | None:intergenic | 45.0% | |
| TCAGTCTCATCGTTCACTAG+CGG | + | chr8_3:54352617-54352636 | Msa1295920:intron | 45.0% | |
| TTTGAACCTGAGACCTAGAG+AGG | + | chr8_3:54352712-54352731 | Msa1295920:intron | 45.0% | |
| !! | GTTGTGTTTTGGGTCAACCT+AGG | - | chr8_3:54352778-54352797 | None:intergenic | 45.0% |
| GCTTAGAAACACTGCCCTTT+CGG | - | chr8_3:54353423-54353442 | None:intergenic | 45.0% | |
| GCTGATCTTTATGGGGACTA+AGG | + | chr8_3:54353441-54353460 | Msa1295920:CDS | 45.0% | |
| GATCTTTATGGGGACTAAGG+AGG | + | chr8_3:54353444-54353463 | Msa1295920:CDS | 45.0% | |
| GATGGTTGTACTGTTGGTGT+TGG | - | chr8_3:54353604-54353623 | None:intergenic | 45.0% | |
| ATGTTCCATTACCTGCATGG+AGG | - | chr8_3:54353644-54353663 | None:intergenic | 45.0% | |
| ACAGTTGAGGCATAATAGGG+AGG | - | chr8_3:54354048-54354067 | None:intergenic | 45.0% | |
| !! | AGTTGGTGAAGCAACAGTTG+AGG | - | chr8_3:54354061-54354080 | None:intergenic | 45.0% |
| CACATATAAGGATGCGGAGT+TGG | - | chr8_3:54354078-54354097 | None:intergenic | 45.0% | |
| CAACTCCGCATCCTTATATG+TGG | + | chr8_3:54354076-54354095 | Msa1295920:intron | 45.0% | |
| ACTCCGCATCCTTATATGTG+GGG | + | chr8_3:54354078-54354097 | Msa1295920:intron | 45.0% | |
| TACATTGCAGGATACGGAAC+TGG | - | chr8_3:54354227-54354246 | None:intergenic | 45.0% | |
| GAGCATACATATTCCCAGGA+GGG | - | chr8_3:54354250-54354269 | None:intergenic | 45.0% | |
| TGAGCATACATATTCCCAGG+AGG | - | chr8_3:54354251-54354270 | None:intergenic | 45.0% | |
| GGATGAGCATACATATTCCC+AGG | - | chr8_3:54354254-54354273 | None:intergenic | 45.0% | |
| TGACTAACCACTACCATGCT+AGG | - | chr8_3:54354275-54354294 | None:intergenic | 45.0% | |
| TGTACACTGCGTCTATGTCT+CGG | + | chr8_3:54354313-54354332 | Msa1295920:intron | 45.0% | |
| AACGTGGCAAAAAAGTTGCC+TGG | - | chr8_3:54354390-54354409 | None:intergenic | 45.0% | |
| !! | GTAGTTTGGTGCATAGCACT+TGG | - | chr8_3:54354494-54354513 | None:intergenic | 45.0% |
| !! | GTATTTGCAGAAGTGCCCTT+CGG | - | chr8_3:54354569-54354588 | None:intergenic | 45.0% |
| TCCTTAAACAGTGGTGACAG+TGG | + | chr8_3:54354734-54354753 | Msa1295920:CDS | 45.0% | |
| ACCACTGTCACCACTGTTTA+AGG | - | chr8_3:54354738-54354757 | None:intergenic | 45.0% | |
| TGCTAGCGATGAAAACCAAC+AGG | + | chr8_3:54354775-54354794 | Msa1295920:CDS | 45.0% | |
| TGTGGATGTGTCTGTGTTTC+AGG | - | chr8_3:54354857-54354876 | None:intergenic | 45.0% | |
| AAACACAGACACATCCACAC+CGG | + | chr8_3:54354858-54354877 | Msa1295920:intron | 45.0% | |
| ! | TTTTTCGCGGTTGCTGAAAC+AGG | + | chr8_3:54355178-54355197 | Msa1295920:intron | 45.0% |
| AGTAGTATTGTTCTGCGCGT+TGG | - | chr8_3:54355229-54355248 | None:intergenic | 45.0% | |
| AACGCGCAGAACAATACTAC+TGG | + | chr8_3:54355228-54355247 | Msa1295920:CDS | 45.0% | |
| ATCGAGACAACAGGATTTCC+AGG | - | chr8_3:54355276-54355295 | None:intergenic | 45.0% | |
| AGTCTAATCGAGAGTCAGCT+AGG | + | chr8_3:54355647-54355666 | Msa1295920:CDS | 45.0% | |
| TGGCTCAGTGTTATCCTCAA+GGG | - | chr8_3:54355721-54355740 | None:intergenic | 45.0% | |
| TTGGCTCAGTGTTATCCTCA+AGG | - | chr8_3:54355722-54355741 | None:intergenic | 45.0% | |
| ! | ATTTTCCTGGTCCAGTTGGA+TGG | - | chr8_3:54355893-54355912 | None:intergenic | 45.0% |
| ! | TCCAACAACTGAGGTTTGGT+TGG | + | chr8_3:54355943-54355962 | Msa1295920:intron | 45.0% |
| TCCAACCAAACCTCAGTTGT+TGG | - | chr8_3:54355947-54355966 | None:intergenic | 45.0% | |
| TAGATGGCAATAGCCCATAG+AGG | + | chr8_3:54355972-54355991 | Msa1295920:intron | 45.0% | |
| CAATAGCCCATAGAGGATCT+GGG | + | chr8_3:54355979-54355998 | Msa1295920:intron | 45.0% | |
| GATCAACCCAGATCCTCTAT+GGG | - | chr8_3:54355988-54356007 | None:intergenic | 45.0% | |
| TGATCAACCCAGATCCTCTA+TGG | - | chr8_3:54355989-54356008 | None:intergenic | 45.0% | |
| TTCCTGTTGGACAACTACAG+GGG | - | chr8_3:54356027-54356046 | None:intergenic | 45.0% | |
| GTTTCCTGTTGGACAACTAC+AGG | - | chr8_3:54356029-54356048 | None:intergenic | 45.0% | |
| TGAAGAGCTACAAAAGAGGG+TGG | + | chr8_3:54356238-54356257 | Msa1295920:CDS | 45.0% | |
| ACTGGTTGTCTACAAAGCAC+CGG | + | chr8_3:54356388-54356407 | Msa1295920:intron | 45.0% | |
| !! | CATTCAATCTGAAGTGTCGG+TGG | + | chr8_3:54356518-54356537 | Msa1295920:intron | 45.0% |
| AAGAGTTGGAACGGTTGTGT+GGG | + | chr8_3:54356630-54356649 | Msa1295920:CDS | 45.0% | |
| TCACTACCTTAGGGCATGTT+TGG | + | chr8_3:54357003-54357022 | Msa1295920:three_prime_UTR | 45.0% | |
| !!! | TAAAGTAATTATTATTTTTT+TGG | + | chr8_3:54352067-54352086 | Msa1295920:intron | 5.0% |
| !! | ATAAACTTATAAAAAAATAA+TGG | + | chr8_3:54352827-54352846 | Msa1295920:intron | 5.0% |
| GATGAGGTGGAAGTCCAAGT+GGG | - | chr8_3:54351732-54351751 | None:intergenic | 50.0% | |
| AGCTAGAGCAAAGTCCTGTG+TGG | + | chr8_3:54352653-54352672 | Msa1295920:intron | 50.0% | |
| TATGTTGAGCCAGTCCACAC+AGG | - | chr8_3:54352670-54352689 | None:intergenic | 50.0% | |
| TGCATGGAGGTTGACCAATC+TGG | - | chr8_3:54353631-54353650 | None:intergenic | 50.0% | |
| ! | AGATTGGTCAACCTCCATGC+AGG | + | chr8_3:54353630-54353649 | Msa1295920:CDS | 50.0% |
| GTCAACCTCCATGCAGGTAA+TGG | + | chr8_3:54353636-54353655 | Msa1295920:intron | 50.0% | |
| CTTGTGTGACTGTTTGGGAG+AGG | - | chr8_3:54353918-54353937 | None:intergenic | 50.0% | |
| AGCGGCTCCAGGATTATAGT+AGG | - | chr8_3:54354022-54354041 | None:intergenic | 50.0% | |
| GTTGAGGCATAATAGGGAGG+TGG | - | chr8_3:54354045-54354064 | None:intergenic | 50.0% | |
| CCTCCCCACATATAAGGATG+CGG | - | chr8_3:54354084-54354103 | None:intergenic | 50.0% | |
| ! | CATCCTATGATGGCGCCATA+CGG | + | chr8_3:54354197-54354216 | Msa1295920:CDS | 50.0% |
| ! | ATCCTATGATGGCGCCATAC+GGG | + | chr8_3:54354198-54354217 | Msa1295920:CDS | 50.0% |
| ! | GGAGGGTACATTGCAGGATA+CGG | - | chr8_3:54354233-54354252 | None:intergenic | 50.0% |
| TATCCTGCAATGTACCCTCC+TGG | + | chr8_3:54354233-54354252 | Msa1295920:CDS | 50.0% | |
| ATCCTGCAATGTACCCTCCT+GGG | + | chr8_3:54354234-54354253 | Msa1295920:CDS | 50.0% | |
| TGCTCATCCTAGCATGGTAG+TGG | + | chr8_3:54354265-54354284 | Msa1295920:CDS | 50.0% | |
| TTTGAAGGGAAGGGACCTGA+TGG | + | chr8_3:54354518-54354537 | Msa1295920:intron | 50.0% | |
| GGGACCTGATGGAAAGGATA+AGG | + | chr8_3:54354529-54354548 | Msa1295920:intron | 50.0% | |
| GCAAATACAAGCGCCAAAGC+AGG | + | chr8_3:54354581-54354600 | Msa1295920:intron | 50.0% | |
| CTTTCCACTCTCTCCTGCTT+TGG | - | chr8_3:54354597-54354616 | None:intergenic | 50.0% | |
| CAAAGCAGGAGAGAGTGGAA+AGG | + | chr8_3:54354595-54354614 | Msa1295920:intron | 50.0% | |
| GGATCAGGTTCAGGCAATGA+TGG | + | chr8_3:54354620-54354639 | Msa1295920:intron | 50.0% | |
| AGTGGTGACAGTGGTTCAGA+GGG | + | chr8_3:54354743-54354762 | Msa1295920:CDS | 50.0% | |
| !! | ATGCATTTGTCGGTGTCGTG+AGG | + | chr8_3:54354918-54354937 | Msa1295920:intron | 50.0% |
| !! | TGCATTTGTCGGTGTCGTGA+GGG | + | chr8_3:54354919-54354938 | Msa1295920:intron | 50.0% |
| AGGGGACACTTGTCATACAC+TGG | + | chr8_3:54354938-54354957 | Msa1295920:intron | 50.0% | |
| CTAATCGAGAGTCAGCTAGG+CGG | + | chr8_3:54355650-54355669 | Msa1295920:CDS | 50.0% | |
| CTACGCAAGCAGGTAAGCTT+TGG | + | chr8_3:54355679-54355698 | Msa1295920:intron | 50.0% | |
| TATAGCCATCCAACTGGACC+AGG | + | chr8_3:54355885-54355904 | Msa1295920:intron | 50.0% | |
| ! | TGGGATTTTCCTGGTCCAGT+TGG | - | chr8_3:54355897-54355916 | None:intergenic | 50.0% |
| GCAATAGCCCATAGAGGATC+TGG | + | chr8_3:54355978-54355997 | Msa1295920:intron | 50.0% | |
| TGGACAACTACAGGGGAAAC+TGG | - | chr8_3:54356020-54356039 | None:intergenic | 50.0% | |
| TTCCCCTGTAGTTGTCCAAC+AGG | + | chr8_3:54356022-54356041 | Msa1295920:intron | 50.0% | |
| CTCTTCACACTCAGCCTAGT+TGG | - | chr8_3:54356225-54356244 | None:intergenic | 50.0% | |
| AGAGCTACAAAAGAGGGTGG+AGG | + | chr8_3:54356241-54356260 | Msa1295920:CDS | 50.0% | |
| !! | TTGTCTACAAAGCACCGGCA+AGG | + | chr8_3:54356393-54356412 | Msa1295920:intron | 50.0% |
| TGTGTGTGACATGTCCTTGC+CGG | - | chr8_3:54356410-54356429 | None:intergenic | 50.0% | |
| !! | AATCTGAAGTGTCGGTGGCT+CGG | + | chr8_3:54356523-54356542 | Msa1295920:intron | 50.0% |
| !! | GTGGCTCGGTGCTATATAGT+TGG | + | chr8_3:54356537-54356556 | Msa1295920:intron | 50.0% |
| GAAGAGTTGGAACGGTTGTG+TGG | + | chr8_3:54356629-54356648 | Msa1295920:CDS | 50.0% | |
| GGATGAGGTGGAAGTCCAAG+TGG | - | chr8_3:54351733-54351752 | None:intergenic | 55.0% | |
| !!! | GGCTTTTGGGGGTGTTGTTG+TGG | + | chr8_3:54352088-54352107 | Msa1295920:intron | 55.0% |
| GTCTCATCGTTCACTAGCGG+CGG | + | chr8_3:54352620-54352639 | Msa1295920:intron | 55.0% | |
| TCTCATCGTTCACTAGCGGC+GGG | + | chr8_3:54352621-54352640 | Msa1295920:intron | 55.0% | |
| GAGCAAAGTCCTGTGTGGAC+TGG | + | chr8_3:54352658-54352677 | Msa1295920:intron | 55.0% | |
| GAACCTGAGACCTAGAGAGG+AGG | + | chr8_3:54352715-54352734 | Msa1295920:intron | 55.0% | |
| TGTCCTCCTCTCTAGGTCTC+AGG | - | chr8_3:54352721-54352740 | None:intergenic | 55.0% | |
| ! | TAGGGTTGACCTGGTGGTGT+GGG | - | chr8_3:54352759-54352778 | None:intergenic | 55.0% |
| TCAACCTAGGGTTGACCTGG+TGG | - | chr8_3:54352765-54352784 | None:intergenic | 55.0% | |
| GGCATAATAGGGAGGTGGAG+CGG | - | chr8_3:54354040-54354059 | None:intergenic | 55.0% | |
| CCGCATCCTTATATGTGGGG+AGG | + | chr8_3:54354081-54354100 | Msa1295920:intron | 55.0% | |
| TCCTTATATGTGGGGAGGCC+AGG | + | chr8_3:54354086-54354105 | Msa1295920:intron | 55.0% | |
| ACCTGGCCTCCCCACATATA+AGG | - | chr8_3:54354090-54354109 | None:intergenic | 55.0% | |
| TACGGAACTGGAGTCCCGTA+TGG | - | chr8_3:54354215-54354234 | None:intergenic | 55.0% | |
| ! | TTCCCAGGAGGGTACATTGC+AGG | - | chr8_3:54354239-54354258 | None:intergenic | 55.0% |
| AGGGAAGGGACCTGATGGAA+AGG | + | chr8_3:54354523-54354542 | Msa1295920:intron | 55.0% | |
| GAGAGTGGAAAGGCAGGATC+AGG | + | chr8_3:54354605-54354624 | Msa1295920:intron | 55.0% | |
| GGAAAGGCAGGATCAGGTTC+AGG | + | chr8_3:54354611-54354630 | Msa1295920:intron | 55.0% | |
| CAGTGGTGACAGTGGTTCAG+AGG | + | chr8_3:54354742-54354761 | Msa1295920:CDS | 55.0% | |
| !! | GCATTTGTCGGTGTCGTGAG+GGG | + | chr8_3:54354920-54354939 | Msa1295920:intron | 55.0% |
| !! | GCGTTGGCTCCTGAAGTTCA+TGG | - | chr8_3:54355213-54355232 | None:intergenic | 55.0% |
| !! | GTTGCAGGCATCGAGACAAC+AGG | - | chr8_3:54355285-54355304 | None:intergenic | 55.0% |
| ! | CTGGTGCACTTGGTGAACAG+TGG | + | chr8_3:54355397-54355416 | Msa1295920:CDS | 55.0% |
| TCACCACTCACCACATGTGC+CGG | + | chr8_3:54356473-54356492 | Msa1295920:intron | 55.0% | |
| !! | CAGTTCCTCAGTGTCGGCTT+TGG | + | chr8_3:54356689-54356708 | Msa1295920:three_prime_UTR | 55.0% |
| !! | TTCCTCAGTGTCGGCTTTGG+TGG | + | chr8_3:54356692-54356711 | Msa1295920:three_prime_UTR | 55.0% |
| ! | CTCAGGGTGTCCTCCTCTCT+AGG | - | chr8_3:54352728-54352747 | None:intergenic | 60.0% |
| CTAGAGAGGAGGACACCCTG+AGG | + | chr8_3:54352726-54352745 | Msa1295920:intron | 60.0% | |
| GGTGTGGGCTTGGAACCTCA+GGG | - | chr8_3:54352744-54352763 | None:intergenic | 60.0% | |
| TGGTGTGGGCTTGGAACCTC+AGG | - | chr8_3:54352745-54352764 | None:intergenic | 60.0% | |
| ! | TTGACCTGGTGGTGTGGGCT+TGG | - | chr8_3:54352754-54352773 | None:intergenic | 60.0% |
| ! | CTAGGGTTGACCTGGTGGTG+TGG | - | chr8_3:54352760-54352779 | None:intergenic | 60.0% |
| CACACCACCAGGTCAACCCT+AGG | + | chr8_3:54352758-54352777 | Msa1295920:intron | 60.0% | |
| GGGTCAACCTAGGGTTGACC+TGG | - | chr8_3:54352768-54352787 | None:intergenic | 60.0% | |
| GTCCCGTATGGCGCCATCAT+AGG | - | chr8_3:54354203-54354222 | None:intergenic | 60.0% | |
| AGCGCCAAAGCAGGAGAGAG+TGG | + | chr8_3:54354590-54354609 | Msa1295920:intron | 60.0% | |
| GCAGGAGAGAGTGGAAAGGC+AGG | + | chr8_3:54354599-54354618 | Msa1295920:intron | 60.0% | |
| CACAATCAACCTGGTGCCCC+TGG | + | chr8_3:54355372-54355391 | Msa1295920:CDS | 60.0% | |
| ACCAAGTGCACCAGCTCCAG+GGG | - | chr8_3:54355391-54355410 | None:intergenic | 60.0% | |
| CACCAAGTGCACCAGCTCCA+GGG | - | chr8_3:54355392-54355411 | None:intergenic | 60.0% | |
| TCACCAAGTGCACCAGCTCC+AGG | - | chr8_3:54355393-54355412 | None:intergenic | 60.0% | |
| GCGGTCAAGACTACGCAAGC+AGG | + | chr8_3:54355669-54355688 | Msa1295920:CDS | 60.0% | |
| ! | ACAAAAGAGGGTGGAGGCGC+TGG | + | chr8_3:54356247-54356266 | Msa1295920:CDS | 60.0% |
| !! | CAAAAGAGGGTGGAGGCGCT+GGG | + | chr8_3:54356248-54356267 | Msa1295920:CDS | 60.0% |
| ACACCGGCACATGTGGTGAG+TGG | - | chr8_3:54356479-54356498 | None:intergenic | 60.0% | |
| GTGACACACACCGGCACATG+TGG | - | chr8_3:54356486-54356505 | None:intergenic | 60.0% | |
| TGCCGGTGTGTGTCACACAC+CGG | + | chr8_3:54356490-54356509 | Msa1295920:intron | 60.0% | |
| GTCCGGTGTGTGACACACAC+CGG | - | chr8_3:54356495-54356514 | None:intergenic | 60.0% | |
| TGCCACCAAAGCCGACACTG+AGG | - | chr8_3:54356697-54356716 | None:intergenic | 60.0% | |
| GGTTCCAAGCCCACACCACC+AGG | + | chr8_3:54352747-54352766 | Msa1295920:intron | 65.0% | |
| TAGGGAGGTGGAGCGGCTCC+AGG | - | chr8_3:54354033-54354052 | None:intergenic | 70.0% | |
| CAACCTGGTGCCCCTGGAGC+TGG | + | chr8_3:54355378-54355397 | Msa1295920:CDS | 70.0% | |
| GCCCCTGGAGCTGGTGCACT+TGG | + | chr8_3:54355387-54355406 | Msa1295920:CDS | 70.0% | |
| !! | AAGAGGGTGGAGGCGCTGGG+AGG | + | chr8_3:54356251-54356270 | Msa1295920:CDS | 70.0% |
| !! | GCACCAGCTCCAGGGGCACC+AGG | - | chr8_3:54355384-54355403 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 54351440 | 54357102 | 54351440 | ID=Msa1295920;Name=Msa1295920 |
| chr8_3 | mRNA | 54351440 | 54357102 | 54351440 | ID=Msa1295920-mRNA-1;Parent=Msa1295920;Name=Msa1295920-mRNA-1;_AED=0.28;_eAED=0.28;_QI=328|0.58|0.61|1|0.66|0.61|13|423|367 |
| chr8_3 | exon | 54351440 | 54351777 | 54351440 | ID=Msa1295920-mRNA-1:exon:15642;Parent=Msa1295920-mRNA-1 |
| chr8_3 | exon | 54353003 | 54353103 | 54353003 | ID=Msa1295920-mRNA-1:exon:15643;Parent=Msa1295920-mRNA-1 |
| chr8_3 | exon | 54353318 | 54353323 | 54353318 | ID=Msa1295920-mRNA-1:exon:15644;Parent=Msa1295920-mRNA-1 |
| chr8_3 | exon | 54353349 | 54353507 | 54353349 | ID=Msa1295920-mRNA-1:exon:15645;Parent=Msa1295920-mRNA-1 |
| chr8_3 | exon | 54353595 | 54353651 | 54353595 | ID=Msa1295920-mRNA-1:exon:15646;Parent=Msa1295920-mRNA-1 |
| chr8_3 | exon | 54354197 | 54354286 | 54354197 | ID=Msa1295920-mRNA-1:exon:15647;Parent=Msa1295920-mRNA-1 |
| chr8_3 | exon | 54354488 | 54354516 | 54354488 | ID=Msa1295920-mRNA-1:exon:15648;Parent=Msa1295920-mRNA-1 |
| chr8_3 | exon | 54354655 | 54354796 | 54354655 | ID=Msa1295920-mRNA-1:exon:15649;Parent=Msa1295920-mRNA-1 |
| chr8_3 | exon | 54355090 | 54355138 | 54355090 | ID=Msa1295920-mRNA-1:exon:15650;Parent=Msa1295920-mRNA-1 |
| chr8_3 | exon | 54355223 | 54355428 | 54355223 | ID=Msa1295920-mRNA-1:exon:15651;Parent=Msa1295920-mRNA-1 |
| chr8_3 | exon | 54355613 | 54355690 | 54355613 | ID=Msa1295920-mRNA-1:exon:15652;Parent=Msa1295920-mRNA-1 |
| chr8_3 | exon | 54356230 | 54356355 | 54356230 | ID=Msa1295920-mRNA-1:exon:15653;Parent=Msa1295920-mRNA-1 |
| chr8_3 | exon | 54356629 | 54357102 | 54356629 | ID=Msa1295920-mRNA-1:exon:15654;Parent=Msa1295920-mRNA-1 |
| chr8_3 | five_prime_UTR | 54351440 | 54351767 | 54351440 | ID=Msa1295920-mRNA-1:five_prime_utr;Parent=Msa1295920-mRNA-1 |
| chr8_3 | CDS | 54351768 | 54351777 | 54351768 | ID=Msa1295920-mRNA-1:cds;Parent=Msa1295920-mRNA-1 |
| chr8_3 | CDS | 54353003 | 54353103 | 54353003 | ID=Msa1295920-mRNA-1:cds;Parent=Msa1295920-mRNA-1 |
| chr8_3 | CDS | 54353318 | 54353323 | 54353318 | ID=Msa1295920-mRNA-1:cds;Parent=Msa1295920-mRNA-1 |
| chr8_3 | CDS | 54353349 | 54353507 | 54353349 | ID=Msa1295920-mRNA-1:cds;Parent=Msa1295920-mRNA-1 |
| chr8_3 | CDS | 54353595 | 54353651 | 54353595 | ID=Msa1295920-mRNA-1:cds;Parent=Msa1295920-mRNA-1 |
| chr8_3 | CDS | 54354197 | 54354286 | 54354197 | ID=Msa1295920-mRNA-1:cds;Parent=Msa1295920-mRNA-1 |
| chr8_3 | CDS | 54354488 | 54354516 | 54354488 | ID=Msa1295920-mRNA-1:cds;Parent=Msa1295920-mRNA-1 |
| chr8_3 | CDS | 54354655 | 54354796 | 54354655 | ID=Msa1295920-mRNA-1:cds;Parent=Msa1295920-mRNA-1 |
| chr8_3 | CDS | 54355090 | 54355138 | 54355090 | ID=Msa1295920-mRNA-1:cds;Parent=Msa1295920-mRNA-1 |
| chr8_3 | CDS | 54355223 | 54355428 | 54355223 | ID=Msa1295920-mRNA-1:cds;Parent=Msa1295920-mRNA-1 |
| chr8_3 | CDS | 54355613 | 54355690 | 54355613 | ID=Msa1295920-mRNA-1:cds;Parent=Msa1295920-mRNA-1 |
| chr8_3 | CDS | 54356230 | 54356355 | 54356230 | ID=Msa1295920-mRNA-1:cds;Parent=Msa1295920-mRNA-1 |
| chr8_3 | CDS | 54356629 | 54356679 | 54356629 | ID=Msa1295920-mRNA-1:cds;Parent=Msa1295920-mRNA-1 |
| chr8_3 | three_prime_UTR | 54356680 | 54357102 | 54356680 | ID=Msa1295920-mRNA-1:three_prime_utr;Parent=Msa1295920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
