Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296070 | XP_003629573.1 | 83.650 | 263 | 18 | 2 | 1 | 263 | 1 | 238 | 1.00e-151 | 432 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296070 | sp|Q32SG3|LBD6_MAIZE | 55.769 | 104 | 46 | 0 | 8 | 111 | 33 | 136 | 4.36e-33 | 124 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296070 | G7LGC5 | 83.650 | 263 | 18 | 2 | 1 | 263 | 1 | 238 | 4.79e-152 | 432 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1296070 | TF | LOB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296070 | MtrunA17_Chr8g0374601 | 74.809 | 262 | 54 | 1 | 1 | 250 | 19 | 280 | 2.82e-141 | 398 |
| Msa1296070 | MtrunA17_Chr8g0374591 | 87.302 | 126 | 16 | 0 | 1 | 126 | 1 | 126 | 2.96e-78 | 232 |
| Msa1296070 | MtrunA17_Chr8g0374581 | 47.701 | 174 | 83 | 3 | 1 | 171 | 1 | 169 | 3.34e-49 | 162 |
| Msa1296070 | MtrunA17_Chr5g0402611 | 54.054 | 111 | 51 | 0 | 8 | 118 | 8 | 118 | 3.50e-36 | 130 |
| Msa1296070 | MtrunA17_Chr3g0115431 | 51.818 | 110 | 53 | 0 | 8 | 117 | 9 | 118 | 1.63e-35 | 126 |
| Msa1296070 | MtrunA17_Chr3g0097221 | 44.970 | 169 | 71 | 4 | 8 | 155 | 7 | 174 | 4.70e-35 | 127 |
| Msa1296070 | MtrunA17_Chr4g0058651 | 49.038 | 104 | 53 | 0 | 8 | 111 | 11 | 114 | 2.20e-31 | 114 |
| Msa1296070 | MtrunA17_Chr3g0117121 | 48.077 | 104 | 54 | 0 | 8 | 111 | 10 | 113 | 3.00e-30 | 112 |
| Msa1296070 | MtrunA17_Chr7g0227511 | 46.154 | 104 | 56 | 0 | 8 | 111 | 11 | 114 | 6.67e-30 | 110 |
| Msa1296070 | MtrunA17_Chr5g0437401 | 49.020 | 102 | 52 | 0 | 9 | 110 | 12 | 113 | 6.72e-30 | 110 |
| Msa1296070 | MtrunA17_Chr2g0311601 | 46.602 | 103 | 55 | 0 | 6 | 108 | 11 | 113 | 7.38e-29 | 107 |
| Msa1296070 | MtrunA17_Chr3g0106101 | 42.574 | 101 | 58 | 0 | 8 | 108 | 7 | 107 | 1.30e-28 | 107 |
| Msa1296070 | MtrunA17_Chr8g0353981 | 47.826 | 115 | 60 | 0 | 8 | 122 | 7 | 121 | 2.81e-28 | 107 |
| Msa1296070 | MtrunA17_Chr5g0437571 | 44.643 | 112 | 60 | 1 | 8 | 117 | 6 | 117 | 3.97e-28 | 105 |
| Msa1296070 | MtrunA17_Chr3g0114061 | 44.554 | 101 | 56 | 0 | 8 | 108 | 8 | 108 | 7.10e-28 | 104 |
| Msa1296070 | MtrunA17_Chr4g0043421 | 40.146 | 137 | 75 | 2 | 8 | 144 | 15 | 144 | 2.13e-27 | 103 |
| Msa1296070 | MtrunA17_Chr6g0449641 | 44.444 | 108 | 59 | 1 | 8 | 115 | 9 | 115 | 1.72e-26 | 100 |
| Msa1296070 | MtrunA17_Chr4g0030001 | 39.416 | 137 | 80 | 3 | 5 | 140 | 21 | 155 | 2.17e-26 | 102 |
| Msa1296070 | MtrunA17_Chr6g0449651 | 42.308 | 104 | 60 | 0 | 8 | 111 | 67 | 170 | 2.44e-26 | 102 |
| Msa1296070 | MtrunA17_Chr3g0113891 | 47.423 | 97 | 51 | 0 | 9 | 105 | 15 | 111 | 1.78e-25 | 99.4 |
| Msa1296070 | MtrunA17_Chr1g0200201 | 46.535 | 101 | 54 | 0 | 9 | 109 | 73 | 173 | 2.97e-25 | 99.8 |
| Msa1296070 | MtrunA17_Chr3g0129071 | 43.396 | 106 | 60 | 0 | 6 | 111 | 45 | 150 | 3.11e-25 | 100 |
| Msa1296070 | MtrunA17_Chr5g0438091 | 43.269 | 104 | 59 | 0 | 8 | 111 | 39 | 142 | 5.17e-25 | 98.6 |
| Msa1296070 | MtrunA17_Chr6g0460951 | 41.667 | 108 | 62 | 1 | 2 | 108 | 34 | 141 | 2.20e-24 | 97.4 |
| Msa1296070 | MtrunA17_Chr8g0351701 | 45.714 | 105 | 56 | 1 | 8 | 111 | 23 | 127 | 7.86e-24 | 96.3 |
| Msa1296070 | MtrunA17_Chr5g0432451 | 40.870 | 115 | 68 | 0 | 6 | 120 | 41 | 155 | 3.55e-23 | 94.4 |
| Msa1296070 | MtrunA17_Chr4g0055441 | 44.118 | 102 | 56 | 1 | 9 | 109 | 3 | 104 | 9.00e-23 | 91.3 |
| Msa1296070 | MtrunA17_Chr6g0460941 | 45.652 | 92 | 49 | 1 | 4 | 94 | 3 | 94 | 1.41e-22 | 89.0 |
| Msa1296070 | MtrunA17_Chr7g0225111 | 36.190 | 105 | 67 | 0 | 5 | 109 | 2 | 106 | 2.32e-22 | 89.0 |
| Msa1296070 | MtrunA17_Chr8g0342351 | 37.864 | 103 | 64 | 0 | 9 | 111 | 13 | 115 | 4.97e-22 | 92.0 |
| Msa1296070 | MtrunA17_Chr7g0260971 | 41.748 | 103 | 59 | 1 | 8 | 109 | 14 | 116 | 7.66e-22 | 90.5 |
| Msa1296070 | MtrunA17_Chr5g0444351 | 36.634 | 101 | 64 | 0 | 9 | 109 | 6 | 106 | 1.29e-21 | 88.2 |
| Msa1296070 | MtrunA17_Chr7g0245871 | 44.118 | 102 | 56 | 1 | 8 | 108 | 27 | 128 | 6.86e-21 | 88.6 |
| Msa1296070 | MtrunA17_Chr1g0184271 | 43.269 | 104 | 58 | 1 | 8 | 110 | 12 | 115 | 1.88e-20 | 87.0 |
| Msa1296070 | MtrunA17_Chr6g0452691 | 40.385 | 104 | 61 | 1 | 7 | 109 | 8 | 111 | 2.66e-20 | 85.5 |
| Msa1296070 | MtrunA17_Chr8g0351721 | 42.718 | 103 | 58 | 1 | 8 | 109 | 18 | 120 | 5.42e-20 | 85.5 |
| Msa1296070 | MtrunA17_Chr6g0452661 | 39.450 | 109 | 62 | 2 | 5 | 109 | 3 | 111 | 1.38e-19 | 85.1 |
| Msa1296070 | MtrunA17_Chr4g0059901 | 38.235 | 102 | 63 | 0 | 7 | 108 | 9 | 110 | 1.54e-19 | 85.5 |
| Msa1296070 | MtrunA17_Chr7g0261031 | 40.385 | 104 | 61 | 1 | 8 | 110 | 8 | 111 | 1.74e-19 | 84.3 |
| Msa1296070 | MtrunA17_Chr1g0184281 | 40.594 | 101 | 59 | 1 | 8 | 107 | 15 | 115 | 3.01e-19 | 83.2 |
| Msa1296070 | MtrunA17_Chr4g0040831 | 35.398 | 113 | 66 | 1 | 1 | 106 | 1 | 113 | 2.59e-18 | 80.9 |
| Msa1296070 | MtrunA17_Chr5g0435641 | 37.864 | 103 | 63 | 1 | 9 | 110 | 8 | 110 | 6.41e-18 | 79.3 |
| Msa1296070 | MtrunA17_Chr5g0439111 | 39.450 | 109 | 62 | 2 | 5 | 109 | 3 | 111 | 9.08e-18 | 80.1 |
| Msa1296070 | MtrunA17_Chr2g0330201 | 33.981 | 103 | 68 | 0 | 7 | 109 | 18 | 120 | 9.99e-18 | 80.9 |
| Msa1296070 | MtrunA17_Chr6g0452671 | 34.343 | 99 | 65 | 0 | 7 | 105 | 10 | 108 | 2.46e-17 | 78.2 |
| Msa1296070 | MtrunA17_Chr4g0046201 | 37.209 | 86 | 54 | 0 | 9 | 94 | 7 | 92 | 8.44e-17 | 77.8 |
| Msa1296070 | MtrunA17_Chr7g0245861 | 43.678 | 87 | 46 | 2 | 8 | 91 | 12 | 98 | 1.13e-14 | 69.3 |
| Msa1296070 | MtrunA17_Chr2g0326041 | 48.000 | 50 | 26 | 0 | 5 | 54 | 30 | 79 | 1.12e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296070 | AT5G66870.1 | 43.590 | 156 | 75 | 2 | 8 | 163 | 7 | 149 | 6.05e-34 | 125 |
| Msa1296070 | AT1G65620.1 | 56.731 | 104 | 45 | 0 | 8 | 111 | 9 | 112 | 1.40e-31 | 115 |
| Msa1296070 | AT1G65620.4 | 56.731 | 104 | 45 | 0 | 8 | 111 | 9 | 112 | 1.40e-31 | 115 |
| Msa1296070 | AT1G65620.3 | 56.731 | 104 | 45 | 0 | 8 | 111 | 9 | 112 | 1.40e-31 | 115 |
| Msa1296070 | AT1G65620.5 | 56.731 | 104 | 45 | 0 | 8 | 111 | 9 | 112 | 1.40e-31 | 115 |
| Msa1296070 | AT1G65620.2 | 56.731 | 104 | 45 | 0 | 8 | 111 | 9 | 112 | 1.40e-31 | 115 |
| Msa1296070 | AT5G63090.4 | 50.000 | 104 | 52 | 0 | 8 | 111 | 11 | 114 | 6.45e-31 | 114 |
| Msa1296070 | AT5G63090.3 | 50.000 | 104 | 52 | 0 | 8 | 111 | 11 | 114 | 6.45e-31 | 114 |
| Msa1296070 | AT5G63090.2 | 50.000 | 104 | 52 | 0 | 8 | 111 | 11 | 114 | 6.45e-31 | 114 |
| Msa1296070 | AT5G63090.1 | 50.000 | 104 | 52 | 0 | 8 | 111 | 11 | 114 | 6.45e-31 | 114 |
| Msa1296070 | AT2G23660.2 | 50.909 | 110 | 54 | 0 | 8 | 117 | 5 | 114 | 1.72e-30 | 116 |
| Msa1296070 | AT2G23660.3 | 50.909 | 110 | 54 | 0 | 8 | 117 | 5 | 114 | 1.72e-30 | 116 |
| Msa1296070 | AT2G23660.1 | 50.909 | 110 | 54 | 0 | 8 | 117 | 5 | 114 | 1.72e-30 | 116 |
| Msa1296070 | AT3G27650.1 | 46.154 | 104 | 56 | 0 | 8 | 111 | 39 | 142 | 9.30e-28 | 104 |
| Msa1296070 | AT1G07900.1 | 45.283 | 106 | 58 | 0 | 3 | 108 | 28 | 133 | 1.01e-27 | 105 |
| Msa1296070 | AT2G30130.1 | 45.545 | 101 | 55 | 0 | 8 | 108 | 8 | 108 | 1.50e-27 | 105 |
| Msa1296070 | AT2G28500.1 | 46.154 | 104 | 56 | 0 | 5 | 108 | 52 | 155 | 1.90e-27 | 106 |
| Msa1296070 | AT1G16530.1 | 46.154 | 104 | 55 | 1 | 6 | 108 | 12 | 115 | 2.39e-26 | 101 |
| Msa1296070 | AT3G11090.1 | 45.000 | 100 | 55 | 0 | 9 | 108 | 12 | 111 | 2.89e-26 | 101 |
| Msa1296070 | AT1G31320.1 | 48.864 | 88 | 45 | 0 | 8 | 95 | 13 | 100 | 5.08e-26 | 100 |
| Msa1296070 | AT3G50510.1 | 43.243 | 111 | 62 | 1 | 1 | 111 | 6 | 115 | 1.08e-25 | 100 |
| Msa1296070 | AT3G50510.2 | 43.243 | 111 | 62 | 1 | 1 | 111 | 6 | 115 | 1.08e-25 | 100 |
| Msa1296070 | AT5G35900.1 | 44.231 | 104 | 58 | 0 | 9 | 112 | 6 | 109 | 5.40e-25 | 99.0 |
| Msa1296070 | AT3G26660.1 | 40.594 | 101 | 60 | 0 | 9 | 109 | 6 | 106 | 4.65e-24 | 94.0 |
| Msa1296070 | AT3G26620.1 | 40.594 | 101 | 60 | 0 | 9 | 109 | 6 | 106 | 6.53e-24 | 93.6 |
| Msa1296070 | AT2G40470.2 | 41.379 | 116 | 68 | 0 | 6 | 121 | 18 | 133 | 7.46e-24 | 95.9 |
| Msa1296070 | AT2G30340.2 | 42.453 | 106 | 61 | 0 | 6 | 111 | 51 | 156 | 7.87e-24 | 97.4 |
| Msa1296070 | AT2G30340.1 | 42.453 | 106 | 61 | 0 | 6 | 111 | 50 | 155 | 9.80e-24 | 97.1 |
| Msa1296070 | AT2G40470.1 | 41.379 | 116 | 68 | 0 | 6 | 121 | 43 | 158 | 2.76e-23 | 95.1 |
| Msa1296070 | AT1G72980.1 | 39.000 | 100 | 61 | 0 | 9 | 108 | 14 | 113 | 6.83e-22 | 90.9 |
| Msa1296070 | AT3G47870.1 | 39.806 | 103 | 62 | 0 | 9 | 111 | 37 | 139 | 8.81e-22 | 92.8 |
| Msa1296070 | AT4G00210.1 | 44.762 | 105 | 53 | 2 | 8 | 109 | 11 | 113 | 1.62e-21 | 90.1 |
| Msa1296070 | AT3G03760.1 | 43.137 | 102 | 57 | 1 | 8 | 108 | 51 | 152 | 2.26e-21 | 90.9 |
| Msa1296070 | AT2G42430.1 | 40.777 | 103 | 60 | 1 | 8 | 109 | 15 | 117 | 3.42e-21 | 89.7 |
| Msa1296070 | AT3G13850.1 | 37.864 | 103 | 64 | 0 | 9 | 111 | 37 | 139 | 5.17e-21 | 89.7 |
| Msa1296070 | AT3G58190.1 | 42.308 | 104 | 59 | 1 | 8 | 110 | 11 | 114 | 2.38e-20 | 87.0 |
| Msa1296070 | AT2G45420.1 | 43.000 | 100 | 56 | 1 | 11 | 109 | 40 | 139 | 1.11e-19 | 86.3 |
| Msa1296070 | AT4G00220.1 | 44.000 | 100 | 55 | 1 | 11 | 109 | 20 | 119 | 2.28e-19 | 84.7 |
| Msa1296070 | AT2G42440.1 | 38.462 | 104 | 63 | 1 | 8 | 110 | 7 | 110 | 3.44e-19 | 84.3 |
| Msa1296070 | AT2G45410.1 | 42.000 | 100 | 57 | 1 | 11 | 109 | 19 | 118 | 8.49e-18 | 79.3 |
| Msa1296070 | AT4G22700.1 | 36.508 | 126 | 76 | 4 | 9 | 131 | 6 | 130 | 4.08e-17 | 77.8 |
| Msa1296070 | AT2G31310.1 | 36.538 | 104 | 65 | 1 | 8 | 110 | 7 | 110 | 2.32e-16 | 75.5 |
| Msa1296070 | AT5G06080.1 | 34.286 | 105 | 68 | 1 | 8 | 111 | 7 | 111 | 6.94e-15 | 71.2 |
| Msa1296070 | AT1G06280.1 | 36.709 | 79 | 50 | 0 | 7 | 85 | 23 | 101 | 3.41e-13 | 67.0 |
Find 90 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGTTCCTGTTCATGATTC+TGG | 0.107641 | 8_3:-54768225 | Msa1296070:CDS |
| CTTCTGTGCTTCCTTCTTCT+AGG | 0.193943 | 8_3:-54768155 | Msa1296070:CDS |
| ATGTTCCTGTTCATGATTCT+GGG | 0.297022 | 8_3:-54768224 | Msa1296070:CDS |
| GTTCATGATTCTGGGTTGGC+TGG | 0.362539 | 8_3:-54768216 | Msa1296070:CDS |
| GACCTGAGGATTGAGGTATT+TGG | 0.365999 | 8_3:+54768527 | None:intergenic |
| GCCAAGGTACACTCGGTGTT+TGG | 0.371149 | 8_3:-54768741 | Msa1296070:CDS |
| AAACGCTCCAAGTTGTCCTT+TGG | 0.382954 | 8_3:+54768765 | None:intergenic |
| AGCAACCAGGGTCGATTGCC+GGG | 0.393568 | 8_3:-54768099 | Msa1296070:CDS |
| CTACCTTGAAGGTCATTTGT+TGG | 0.397171 | 8_3:+54768597 | None:intergenic |
| AAGCAACCAGGGTCGATTGC+CGG | 0.397461 | 8_3:-54768100 | Msa1296070:CDS |
| GGCTTAAAGCCAAAACAATC+AGG | 0.409263 | 8_3:+54768483 | None:intergenic |
| TTCTGTGCTTCCTTCTTCTA+GGG | 0.409577 | 8_3:-54768154 | Msa1296070:CDS |
| GAGGAACATGAGGAAGCATC+TGG | 0.409895 | 8_3:+54768190 | None:intergenic |
| CTAAAACAAAAGCTTCTTAG+TGG | 0.418812 | 8_3:-54768357 | Msa1296070:CDS |
| CAGGAACATCAGCACCCATC+TGG | 0.437219 | 8_3:+54768238 | None:intergenic |
| AAGTTGTCCTTTGGAAAGTA+AGG | 0.439193 | 8_3:+54768774 | None:intergenic |
| AGCACAGAAGGAGCATCAAC+AGG | 0.442967 | 8_3:+54768168 | None:intergenic |
| AGCTAGGGTGGCACTTCCTA+TGG | 0.445033 | 8_3:+54768808 | None:intergenic |
| GGTGGTTCAGTCGGTGGCAG+TGG | 0.448506 | 8_3:-54768276 | Msa1296070:CDS |
| TCCTGTTCATGATTCTGGGT+TGG | 0.449021 | 8_3:-54768220 | Msa1296070:CDS |
| GACAGTCGGTGGAGGACCAT+TGG | 0.450872 | 8_3:-54768439 | Msa1296070:CDS |
| CTTCATTCAACCTACCTTGA+AGG | 0.452245 | 8_3:+54768586 | None:intergenic |
| GCCAACCCATCATCACCATC+GGG | 0.452840 | 8_3:+54768333 | None:intergenic |
| AGTGGCCCCGATGGTGATGA+TGG | 0.469173 | 8_3:-54768339 | Msa1296070:CDS |
| CAGGAACATTAACATCCATC+TGG | 0.471455 | 8_3:+54768304 | None:intergenic |
| GACCCTATCCATGGTTGTGC+GGG | 0.480158 | 8_3:-54768621 | Msa1296070:CDS |
| ACAGTCGGTGGAGGACCATT+GGG | 0.481003 | 8_3:-54768438 | Msa1296070:CDS |
| GCCAACCCAGAATCATGAAC+AGG | 0.484253 | 8_3:+54768219 | None:intergenic |
| TTACTTTCCAAAGGACAACT+TGG | 0.485558 | 8_3:-54768772 | Msa1296070:CDS |
| ATAGTCGGTGGAGAAGCATT+TGG | 0.487182 | 8_3:+54768462 | None:intergenic |
| TGGTGTATGAAGCTGATGCC+TGG | 0.491815 | 8_3:-54768650 | Msa1296070:CDS |
| CCGACTGAACCACCACCAAC+AGG | 0.496150 | 8_3:+54768285 | None:intergenic |
| AGTCGGTGGCAGTGGTGGCT+CGG | 0.496637 | 8_3:-54768268 | Msa1296070:CDS |
| TAAGGAGCTAAGACACAGCT+AGG | 0.498376 | 8_3:+54768792 | None:intergenic |
| TGCCAACCCATCATCACCAT+CGG | 0.501173 | 8_3:+54768332 | None:intergenic |
| TGAACAAGCTGTTGAATCCT+TGG | 0.502541 | 8_3:-54768670 | Msa1296070:CDS |
| GTTAATGTTCCTGTTGGTGG+TGG | 0.504572 | 8_3:-54768294 | Msa1296070:CDS |
| GATGTTAATGTTCCTGTTGG+TGG | 0.510237 | 8_3:-54768297 | Msa1296070:CDS |
| TAGGTTGAATGAAGCTCAAA+CGG | 0.515884 | 8_3:-54768577 | Msa1296070:CDS |
| AAAGTATCAGCCCTAGAAGA+AGG | 0.518742 | 8_3:+54768144 | None:intergenic |
| CAAGAGTATGAAGAATGAAC+TGG | 0.518901 | 8_3:-54768550 | Msa1296070:CDS |
| GATGGTGATGATGGGTTGGC+AGG | 0.524172 | 8_3:-54768330 | Msa1296070:CDS |
| CTAGAAGAAGGAAGCACAGA+AGG | 0.524800 | 8_3:+54768156 | None:intergenic |
| GGTTCAGTCGGTGGCAGTGG+TGG | 0.531303 | 8_3:-54768273 | Msa1296070:CDS |
| CTTAGCTCCTTACTTTCCAA+AGG | 0.539710 | 8_3:-54768781 | Msa1296070:CDS |
| CCCCGATGGTGATGATGGGT+TGG | 0.540092 | 8_3:-54768334 | Msa1296070:CDS |
| GATCAAACGTTGTGGCTCCC+CGG | 0.541997 | 8_3:+54768081 | None:intergenic |
| ATGAAGCTGATGCCTGGTTG+AGG | 0.542839 | 8_3:-54768644 | Msa1296070:CDS |
| TCCAAACACCGAGTGTACCT+TGG | 0.546759 | 8_3:+54768740 | None:intergenic |
| GGTCCAACAAATGACCTTCA+AGG | 0.554904 | 8_3:-54768600 | Msa1296070:CDS |
| GACCCGCACAACCATGGATA+GGG | 0.555370 | 8_3:+54768619 | None:intergenic |
| TTGTTGGACCCGCACAACCA+TGG | 0.555745 | 8_3:+54768613 | None:intergenic |
| GGCCAAATACCTCAATCCTC+AGG | 0.557788 | 8_3:-54768529 | Msa1296070:CDS |
| TGGCTCGGCAAGATTCCAGA+TGG | 0.560308 | 8_3:-54768253 | Msa1296070:CDS |
| GGACCCGCACAACCATGGAT+AGG | 0.560372 | 8_3:+54768618 | None:intergenic |
| CCTGTTGGTGGTGGTTCAGT+CGG | 0.562105 | 8_3:-54768285 | Msa1296070:CDS |
| AGATGCTTGCAAGCTGCACA+TGG | 0.564745 | 8_3:+54768831 | None:intergenic |
| GGACCCTATCCATGGTTGTG+CGG | 0.567733 | 8_3:-54768622 | Msa1296070:CDS |
| TAGCACTAGCACAAGCAACC+AGG | 0.569645 | 8_3:-54768112 | Msa1296070:CDS |
| TGAAGCTGATGCCTGGTTGA+GGG | 0.570610 | 8_3:-54768643 | Msa1296070:CDS |
| GGCTCGGCAAGATTCCAGAT+GGG | 0.571382 | 8_3:-54768252 | Msa1296070:CDS |
| ATGGATAGGGTCCCTCAACC+AGG | 0.574346 | 8_3:+54768632 | None:intergenic |
| ATTCAACGACCTGAGGATTG+AGG | 0.583762 | 8_3:+54768520 | None:intergenic |
| CAGCTTGCAAGCATCTCCAT+AGG | 0.587034 | 8_3:-54768824 | Msa1296070:CDS |
| AAGCTTCTTAGTGGCCCCGA+TGG | 0.587409 | 8_3:-54768348 | Msa1296070:CDS |
| ATGGATGTTAATGTTCCTGT+TGG | 0.590588 | 8_3:-54768300 | Msa1296070:CDS |
| TGGTTGAGGGACCCTATCCA+TGG | 0.595646 | 8_3:-54768630 | Msa1296070:CDS |
| TGAGTCGTTAACTCAGCAGC+TGG | 0.600497 | 8_3:+54768402 | None:intergenic |
| GCAACCAGGGTCGATTGCCG+GGG | 0.604916 | 8_3:-54768098 | Msa1296070:CDS |
| CCTCCACCGACTGTCATAGT+CGG | 0.607543 | 8_3:+54768447 | None:intergenic |
| CAACTTGGAGCGTTTCGCCA+AGG | 0.611250 | 8_3:-54768757 | Msa1296070:CDS |
| GCATCAACAGGAGGAACATG+AGG | 0.622008 | 8_3:+54768180 | None:intergenic |
| AGGAACATGAGGAAGCATCT+GGG | 0.622177 | 8_3:+54768191 | None:intergenic |
| GTTGGTGGTGGTTCAGTCGG+TGG | 0.623040 | 8_3:-54768282 | Msa1296070:CDS |
| GGCAGCTGATTAAAACCCAA+TGG | 0.624529 | 8_3:+54768423 | None:intergenic |
| CGCCGCAAGATCAAACGTTG+TGG | 0.625416 | 8_3:+54768073 | None:intergenic |
| GAGCTAAGACACAGCTAGGG+TGG | 0.629501 | 8_3:+54768796 | None:intergenic |
| AAGGAGCTAAGACACAGCTA+GGG | 0.637825 | 8_3:+54768793 | None:intergenic |
| CCGACTATGACAGTCGGTGG+AGG | 0.638161 | 8_3:-54768447 | Msa1296070:CDS |
| GTGGCCCCGATGGTGATGAT+GGG | 0.639305 | 8_3:-54768338 | Msa1296070:CDS |
| CAACAAATGACCTTCAAGGT+AGG | 0.644119 | 8_3:-54768596 | Msa1296070:CDS |
| CCACCGACTATGACAGTCGG+TGG | 0.655151 | 8_3:-54768450 | Msa1296070:CDS |
| GATGCTTGCAAGCTGCACAT+GGG | 0.660822 | 8_3:+54768832 | None:intergenic |
| AGCACTAGCACAAGCAACCA+GGG | 0.667332 | 8_3:-54768111 | Msa1296070:CDS |
| TCTCCACCGACTATGACAGT+CGG | 0.670674 | 8_3:-54768453 | Msa1296070:CDS |
| AGAACAAATTCAACGACCTG+AGG | 0.672940 | 8_3:+54768513 | None:intergenic |
| TGGGTTGGCAGGATTCCAGA+TGG | 0.675884 | 8_3:-54768319 | Msa1296070:CDS |
| ACAGAAGGAGCATCAACAGG+AGG | 0.677829 | 8_3:+54768171 | None:intergenic |
| GGCATCAGCTTCATACACCA+AGG | 0.679242 | 8_3:+54768653 | None:intergenic |
| CCAACCCATCATCACCATCG+GGG | 0.738435 | 8_3:+54768334 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| GACTAATCTGTTGAAAAAAC+TGG | - | chr8_3:54768229-54768248 | Msa1296070:CDS | 30.0% | |
| !!! | GCTTTTGTTTTAGAACTTCT+AGG | + | chr8_3:54768571-54768590 | None:intergenic | 30.0% |
| CTAAAACAAAAGCTTCTTAG+TGG | - | chr8_3:54768578-54768597 | Msa1296070:CDS | 30.0% | |
| GACTAATCTGTTGAAAAAAC+TGG | - | chr8_3:54768229-54768248 | Msa1296070:CDS | 30.0% | |
| !!! | GCTTTTGTTTTAGAACTTCT+AGG | + | chr8_3:54768571-54768590 | None:intergenic | 30.0% |
| CTAAAACAAAAGCTTCTTAG+TGG | - | chr8_3:54768578-54768597 | Msa1296070:CDS | 30.0% | |
| ! | AAGTTGTCCTTTGGAAAGTA+AGG | + | chr8_3:54768164-54768183 | None:intergenic | 35.0% |
| TTACTTTCCAAAGGACAACT+TGG | - | chr8_3:54768163-54768182 | Msa1296070:CDS | 35.0% | |
| ! | TAGGTTGAATGAAGCTCAAA+CGG | - | chr8_3:54768358-54768377 | Msa1296070:CDS | 35.0% |
| ! | CAAGAGTATGAAGAATGAAC+TGG | - | chr8_3:54768385-54768404 | Msa1296070:CDS | 35.0% |
| ATGGATGTTAATGTTCCTGT+TGG | - | chr8_3:54768635-54768654 | Msa1296070:CDS | 35.0% | |
| ATGTTCCTGTTCATGATTCT+GGG | - | chr8_3:54768711-54768730 | Msa1296070:CDS | 35.0% | |
| ! | AAGTTGTCCTTTGGAAAGTA+AGG | + | chr8_3:54768164-54768183 | None:intergenic | 35.0% |
| TTACTTTCCAAAGGACAACT+TGG | - | chr8_3:54768163-54768182 | Msa1296070:CDS | 35.0% | |
| ! | TAGGTTGAATGAAGCTCAAA+CGG | - | chr8_3:54768358-54768377 | Msa1296070:CDS | 35.0% |
| ! | CAAGAGTATGAAGAATGAAC+TGG | - | chr8_3:54768385-54768404 | Msa1296070:CDS | 35.0% |
| ATGGATGTTAATGTTCCTGT+TGG | - | chr8_3:54768635-54768654 | Msa1296070:CDS | 35.0% | |
| ATGTTCCTGTTCATGATTCT+GGG | - | chr8_3:54768711-54768730 | Msa1296070:CDS | 35.0% | |
| CTTAGCTCCTTACTTTCCAA+AGG | - | chr8_3:54768154-54768173 | Msa1296070:CDS | 40.0% | |
| TGAACAAGCTGTTGAATCCT+TGG | - | chr8_3:54768265-54768284 | Msa1296070:CDS | 40.0% | |
| CTACCTTGAAGGTCATTTGT+TGG | + | chr8_3:54768341-54768360 | None:intergenic | 40.0% | |
| CAACAAATGACCTTCAAGGT+AGG | - | chr8_3:54768339-54768358 | Msa1296070:CDS | 40.0% | |
| CTTCATTCAACCTACCTTGA+AGG | + | chr8_3:54768352-54768371 | None:intergenic | 40.0% | |
| AGAACAAATTCAACGACCTG+AGG | + | chr8_3:54768425-54768444 | None:intergenic | 40.0% | |
| !! | CTCGCTTTTCCTGATTGTTT+TGG | - | chr8_3:54768443-54768462 | Msa1296070:CDS | 40.0% |
| GGCTTAAAGCCAAAACAATC+AGG | + | chr8_3:54768455-54768474 | None:intergenic | 40.0% | |
| CAGGAACATTAACATCCATC+TGG | + | chr8_3:54768634-54768653 | None:intergenic | 40.0% | |
| GATGTTAATGTTCCTGTTGG+TGG | - | chr8_3:54768638-54768657 | Msa1296070:CDS | 40.0% | |
| GATGTTCCTGTTCATGATTC+TGG | - | chr8_3:54768710-54768729 | Msa1296070:CDS | 40.0% | |
| TTCTGTGCTTCCTTCTTCTA+GGG | - | chr8_3:54768781-54768800 | Msa1296070:CDS | 40.0% | |
| ! | AAAGTATCAGCCCTAGAAGA+AGG | + | chr8_3:54768794-54768813 | None:intergenic | 40.0% |
| ! | AGGGCTGATACTTTTGACAA+TGG | - | chr8_3:54768800-54768819 | Msa1296070:CDS | 40.0% |
| CTTAGCTCCTTACTTTCCAA+AGG | - | chr8_3:54768154-54768173 | Msa1296070:CDS | 40.0% | |
| TGAACAAGCTGTTGAATCCT+TGG | - | chr8_3:54768265-54768284 | Msa1296070:CDS | 40.0% | |
| CTACCTTGAAGGTCATTTGT+TGG | + | chr8_3:54768341-54768360 | None:intergenic | 40.0% | |
| CAACAAATGACCTTCAAGGT+AGG | - | chr8_3:54768339-54768358 | Msa1296070:CDS | 40.0% | |
| CTTCATTCAACCTACCTTGA+AGG | + | chr8_3:54768352-54768371 | None:intergenic | 40.0% | |
| AGAACAAATTCAACGACCTG+AGG | + | chr8_3:54768425-54768444 | None:intergenic | 40.0% | |
| !! | CTCGCTTTTCCTGATTGTTT+TGG | - | chr8_3:54768443-54768462 | Msa1296070:CDS | 40.0% |
| GGCTTAAAGCCAAAACAATC+AGG | + | chr8_3:54768455-54768474 | None:intergenic | 40.0% | |
| CAGGAACATTAACATCCATC+TGG | + | chr8_3:54768634-54768653 | None:intergenic | 40.0% | |
| GATGTTAATGTTCCTGTTGG+TGG | - | chr8_3:54768638-54768657 | Msa1296070:CDS | 40.0% | |
| GATGTTCCTGTTCATGATTC+TGG | - | chr8_3:54768710-54768729 | Msa1296070:CDS | 40.0% | |
| TTCTGTGCTTCCTTCTTCTA+GGG | - | chr8_3:54768781-54768800 | Msa1296070:CDS | 40.0% | |
| ! | AAAGTATCAGCCCTAGAAGA+AGG | + | chr8_3:54768794-54768813 | None:intergenic | 40.0% |
| ! | AGGGCTGATACTTTTGACAA+TGG | - | chr8_3:54768800-54768819 | Msa1296070:CDS | 40.0% |
| AAGGAGCTAAGACACAGCTA+GGG | + | chr8_3:54768145-54768164 | None:intergenic | 45.0% | |
| TAAGGAGCTAAGACACAGCT+AGG | + | chr8_3:54768146-54768165 | None:intergenic | 45.0% | |
| AAACGCTCCAAGTTGTCCTT+TGG | + | chr8_3:54768173-54768192 | None:intergenic | 45.0% | |
| GGTCCAACAAATGACCTTCA+AGG | - | chr8_3:54768335-54768354 | Msa1296070:CDS | 45.0% | |
| ! | GACCTGAGGATTGAGGTATT+TGG | + | chr8_3:54768411-54768430 | None:intergenic | 45.0% |
| ATTCAACGACCTGAGGATTG+AGG | + | chr8_3:54768418-54768437 | None:intergenic | 45.0% | |
| !! | ATAGTCGGTGGAGAAGCATT+TGG | + | chr8_3:54768476-54768495 | None:intergenic | 45.0% |
| GGCAGCTGATTAAAACCCAA+TGG | + | chr8_3:54768515-54768534 | None:intergenic | 45.0% | |
| ! | GTTAATGTTCCTGTTGGTGG+TGG | - | chr8_3:54768641-54768660 | Msa1296070:CDS | 45.0% |
| TCCTGTTCATGATTCTGGGT+TGG | - | chr8_3:54768715-54768734 | Msa1296070:CDS | 45.0% | |
| !! | AGGAACATGAGGAAGCATCT+GGG | + | chr8_3:54768747-54768766 | None:intergenic | 45.0% |
| ! | CTAGAAGAAGGAAGCACAGA+AGG | + | chr8_3:54768782-54768801 | None:intergenic | 45.0% |
| CTTCTGTGCTTCCTTCTTCT+AGG | - | chr8_3:54768780-54768799 | Msa1296070:CDS | 45.0% | |
| AAGGAGCTAAGACACAGCTA+GGG | + | chr8_3:54768145-54768164 | None:intergenic | 45.0% | |
| TAAGGAGCTAAGACACAGCT+AGG | + | chr8_3:54768146-54768165 | None:intergenic | 45.0% | |
| AAACGCTCCAAGTTGTCCTT+TGG | + | chr8_3:54768173-54768192 | None:intergenic | 45.0% | |
| GGTCCAACAAATGACCTTCA+AGG | - | chr8_3:54768335-54768354 | Msa1296070:CDS | 45.0% | |
| ! | GACCTGAGGATTGAGGTATT+TGG | + | chr8_3:54768411-54768430 | None:intergenic | 45.0% |
| ATTCAACGACCTGAGGATTG+AGG | + | chr8_3:54768418-54768437 | None:intergenic | 45.0% | |
| !! | ATAGTCGGTGGAGAAGCATT+TGG | + | chr8_3:54768476-54768495 | None:intergenic | 45.0% |
| GGCAGCTGATTAAAACCCAA+TGG | + | chr8_3:54768515-54768534 | None:intergenic | 45.0% | |
| ! | GTTAATGTTCCTGTTGGTGG+TGG | - | chr8_3:54768641-54768660 | Msa1296070:CDS | 45.0% |
| TCCTGTTCATGATTCTGGGT+TGG | - | chr8_3:54768715-54768734 | Msa1296070:CDS | 45.0% | |
| !! | AGGAACATGAGGAAGCATCT+GGG | + | chr8_3:54768747-54768766 | None:intergenic | 45.0% |
| ! | CTAGAAGAAGGAAGCACAGA+AGG | + | chr8_3:54768782-54768801 | None:intergenic | 45.0% |
| CTTCTGTGCTTCCTTCTTCT+AGG | - | chr8_3:54768780-54768799 | Msa1296070:CDS | 45.0% | |
| GATGCTTGCAAGCTGCACAT+GGG | + | chr8_3:54768106-54768125 | None:intergenic | 50.0% | |
| AGATGCTTGCAAGCTGCACA+TGG | + | chr8_3:54768107-54768126 | None:intergenic | 50.0% | |
| CAGCTTGCAAGCATCTCCAT+AGG | - | chr8_3:54768111-54768130 | Msa1296070:CDS | 50.0% | |
| TCCAAACACCGAGTGTACCT+TGG | + | chr8_3:54768198-54768217 | None:intergenic | 50.0% | |
| GGCATCAGCTTCATACACCA+AGG | + | chr8_3:54768285-54768304 | None:intergenic | 50.0% | |
| TGGTGTATGAAGCTGATGCC+TGG | - | chr8_3:54768285-54768304 | Msa1296070:CDS | 50.0% | |
| ATGAAGCTGATGCCTGGTTG+AGG | - | chr8_3:54768291-54768310 | Msa1296070:CDS | 50.0% | |
| TGAAGCTGATGCCTGGTTGA+GGG | - | chr8_3:54768292-54768311 | Msa1296070:CDS | 50.0% | |
| GGCCAAATACCTCAATCCTC+AGG | - | chr8_3:54768406-54768425 | Msa1296070:CDS | 50.0% | |
| ! | TCTCCACCGACTATGACAGT+CGG | - | chr8_3:54768482-54768501 | Msa1296070:CDS | 50.0% |
| TGAGTCGTTAACTCAGCAGC+TGG | + | chr8_3:54768536-54768555 | None:intergenic | 50.0% | |
| TGCCAACCCATCATCACCAT+CGG | + | chr8_3:54768606-54768625 | None:intergenic | 50.0% | |
| GCCAACCCAGAATCATGAAC+AGG | + | chr8_3:54768719-54768738 | None:intergenic | 50.0% | |
| !! | GTTCATGATTCTGGGTTGGC+TGG | - | chr8_3:54768719-54768738 | Msa1296070:CDS | 50.0% |
| !! | GAGGAACATGAGGAAGCATC+TGG | + | chr8_3:54768748-54768767 | None:intergenic | 50.0% |
| GCATCAACAGGAGGAACATG+AGG | + | chr8_3:54768758-54768777 | None:intergenic | 50.0% | |
| !! | ACAGAAGGAGCATCAACAGG+AGG | + | chr8_3:54768767-54768786 | None:intergenic | 50.0% |
| !! | AGCACAGAAGGAGCATCAAC+AGG | + | chr8_3:54768770-54768789 | None:intergenic | 50.0% |
| TAGCACTAGCACAAGCAACC+AGG | - | chr8_3:54768823-54768842 | Msa1296070:CDS | 50.0% | |
| AGCACTAGCACAAGCAACCA+GGG | - | chr8_3:54768824-54768843 | Msa1296070:CDS | 50.0% | |
| GATGCTTGCAAGCTGCACAT+GGG | + | chr8_3:54768106-54768125 | None:intergenic | 50.0% | |
| AGATGCTTGCAAGCTGCACA+TGG | + | chr8_3:54768107-54768126 | None:intergenic | 50.0% | |
| CAGCTTGCAAGCATCTCCAT+AGG | - | chr8_3:54768111-54768130 | Msa1296070:CDS | 50.0% | |
| TCCAAACACCGAGTGTACCT+TGG | + | chr8_3:54768198-54768217 | None:intergenic | 50.0% | |
| GGCATCAGCTTCATACACCA+AGG | + | chr8_3:54768285-54768304 | None:intergenic | 50.0% | |
| TGGTGTATGAAGCTGATGCC+TGG | - | chr8_3:54768285-54768304 | Msa1296070:CDS | 50.0% | |
| ATGAAGCTGATGCCTGGTTG+AGG | - | chr8_3:54768291-54768310 | Msa1296070:CDS | 50.0% | |
| TGAAGCTGATGCCTGGTTGA+GGG | - | chr8_3:54768292-54768311 | Msa1296070:CDS | 50.0% | |
| GGCCAAATACCTCAATCCTC+AGG | - | chr8_3:54768406-54768425 | Msa1296070:CDS | 50.0% | |
| ! | TCTCCACCGACTATGACAGT+CGG | - | chr8_3:54768482-54768501 | Msa1296070:CDS | 50.0% |
| TGAGTCGTTAACTCAGCAGC+TGG | + | chr8_3:54768536-54768555 | None:intergenic | 50.0% | |
| TGCCAACCCATCATCACCAT+CGG | + | chr8_3:54768606-54768625 | None:intergenic | 50.0% | |
| GCCAACCCAGAATCATGAAC+AGG | + | chr8_3:54768719-54768738 | None:intergenic | 50.0% | |
| !! | GTTCATGATTCTGGGTTGGC+TGG | - | chr8_3:54768719-54768738 | Msa1296070:CDS | 50.0% |
| !! | GAGGAACATGAGGAAGCATC+TGG | + | chr8_3:54768748-54768767 | None:intergenic | 50.0% |
| GCATCAACAGGAGGAACATG+AGG | + | chr8_3:54768758-54768777 | None:intergenic | 50.0% | |
| !! | ACAGAAGGAGCATCAACAGG+AGG | + | chr8_3:54768767-54768786 | None:intergenic | 50.0% |
| !! | AGCACAGAAGGAGCATCAAC+AGG | + | chr8_3:54768770-54768789 | None:intergenic | 50.0% |
| TAGCACTAGCACAAGCAACC+AGG | - | chr8_3:54768823-54768842 | Msa1296070:CDS | 50.0% | |
| AGCACTAGCACAAGCAACCA+GGG | - | chr8_3:54768824-54768843 | Msa1296070:CDS | 50.0% | |
| AGCTAGGGTGGCACTTCCTA+TGG | + | chr8_3:54768130-54768149 | None:intergenic | 55.0% | |
| GAGCTAAGACACAGCTAGGG+TGG | + | chr8_3:54768142-54768161 | None:intergenic | 55.0% | |
| ! | CAACTTGGAGCGTTTCGCCA+AGG | - | chr8_3:54768178-54768197 | Msa1296070:CDS | 55.0% |
| GCGTTTCGCCAAGGTACACT+CGG | - | chr8_3:54768187-54768206 | Msa1296070:CDS | 55.0% | |
| !! | GCCAAGGTACACTCGGTGTT+TGG | - | chr8_3:54768194-54768213 | Msa1296070:CDS | 55.0% |
| ATGGATAGGGTCCCTCAACC+AGG | + | chr8_3:54768306-54768325 | None:intergenic | 55.0% | |
| TGGTTGAGGGACCCTATCCA+TGG | - | chr8_3:54768305-54768324 | Msa1296070:CDS | 55.0% | |
| GGACCCTATCCATGGTTGTG+CGG | - | chr8_3:54768313-54768332 | Msa1296070:CDS | 55.0% | |
| GACCCTATCCATGGTTGTGC+GGG | - | chr8_3:54768314-54768333 | Msa1296070:CDS | 55.0% | |
| GACCCGCACAACCATGGATA+GGG | + | chr8_3:54768319-54768338 | None:intergenic | 55.0% | |
| TTGTTGGACCCGCACAACCA+TGG | + | chr8_3:54768325-54768344 | None:intergenic | 55.0% | |
| ! | CCTCCACCGACTGTCATAGT+CGG | + | chr8_3:54768491-54768510 | None:intergenic | 55.0% |
| ACAGTCGGTGGAGGACCATT+GGG | - | chr8_3:54768497-54768516 | Msa1296070:CDS | 55.0% | |
| AAGCTTCTTAGTGGCCCCGA+TGG | - | chr8_3:54768587-54768606 | Msa1296070:CDS | 55.0% | |
| CCAACCCATCATCACCATCG+GGG | + | chr8_3:54768604-54768623 | None:intergenic | 55.0% | |
| GCCAACCCATCATCACCATC+GGG | + | chr8_3:54768605-54768624 | None:intergenic | 55.0% | |
| !! | GATGGTGATGATGGGTTGGC+AGG | - | chr8_3:54768605-54768624 | Msa1296070:CDS | 55.0% |
| !! | TGGGTTGGCAGGATTCCAGA+TGG | - | chr8_3:54768616-54768635 | Msa1296070:CDS | 55.0% |
| !! | CCTGTTGGTGGTGGTTCAGT+CGG | - | chr8_3:54768650-54768669 | Msa1296070:CDS | 55.0% |
| ! | TGGCTCGGCAAGATTCCAGA+TGG | - | chr8_3:54768682-54768701 | Msa1296070:CDS | 55.0% |
| GGCTCGGCAAGATTCCAGAT+GGG | - | chr8_3:54768683-54768702 | Msa1296070:CDS | 55.0% | |
| CAGGAACATCAGCACCCATC+TGG | + | chr8_3:54768700-54768719 | None:intergenic | 55.0% | |
| AAGCAACCAGGGTCGATTGC+CGG | - | chr8_3:54768835-54768854 | Msa1296070:CDS | 55.0% | |
| AGCTAGGGTGGCACTTCCTA+TGG | + | chr8_3:54768130-54768149 | None:intergenic | 55.0% | |
| GAGCTAAGACACAGCTAGGG+TGG | + | chr8_3:54768142-54768161 | None:intergenic | 55.0% | |
| ! | CAACTTGGAGCGTTTCGCCA+AGG | - | chr8_3:54768178-54768197 | Msa1296070:CDS | 55.0% |
| GCGTTTCGCCAAGGTACACT+CGG | - | chr8_3:54768187-54768206 | Msa1296070:CDS | 55.0% | |
| !! | GCCAAGGTACACTCGGTGTT+TGG | - | chr8_3:54768194-54768213 | Msa1296070:CDS | 55.0% |
| ATGGATAGGGTCCCTCAACC+AGG | + | chr8_3:54768306-54768325 | None:intergenic | 55.0% | |
| TGGTTGAGGGACCCTATCCA+TGG | - | chr8_3:54768305-54768324 | Msa1296070:CDS | 55.0% | |
| GGACCCTATCCATGGTTGTG+CGG | - | chr8_3:54768313-54768332 | Msa1296070:CDS | 55.0% | |
| GACCCTATCCATGGTTGTGC+GGG | - | chr8_3:54768314-54768333 | Msa1296070:CDS | 55.0% | |
| GACCCGCACAACCATGGATA+GGG | + | chr8_3:54768319-54768338 | None:intergenic | 55.0% | |
| TTGTTGGACCCGCACAACCA+TGG | + | chr8_3:54768325-54768344 | None:intergenic | 55.0% | |
| ! | CCTCCACCGACTGTCATAGT+CGG | + | chr8_3:54768491-54768510 | None:intergenic | 55.0% |
| ACAGTCGGTGGAGGACCATT+GGG | - | chr8_3:54768497-54768516 | Msa1296070:CDS | 55.0% | |
| AAGCTTCTTAGTGGCCCCGA+TGG | - | chr8_3:54768587-54768606 | Msa1296070:CDS | 55.0% | |
| CCAACCCATCATCACCATCG+GGG | + | chr8_3:54768604-54768623 | None:intergenic | 55.0% | |
| GCCAACCCATCATCACCATC+GGG | + | chr8_3:54768605-54768624 | None:intergenic | 55.0% | |
| !! | GATGGTGATGATGGGTTGGC+AGG | - | chr8_3:54768605-54768624 | Msa1296070:CDS | 55.0% |
| !! | TGGGTTGGCAGGATTCCAGA+TGG | - | chr8_3:54768616-54768635 | Msa1296070:CDS | 55.0% |
| !! | CCTGTTGGTGGTGGTTCAGT+CGG | - | chr8_3:54768650-54768669 | Msa1296070:CDS | 55.0% |
| ! | TGGCTCGGCAAGATTCCAGA+TGG | - | chr8_3:54768682-54768701 | Msa1296070:CDS | 55.0% |
| GGCTCGGCAAGATTCCAGAT+GGG | - | chr8_3:54768683-54768702 | Msa1296070:CDS | 55.0% | |
| CAGGAACATCAGCACCCATC+TGG | + | chr8_3:54768700-54768719 | None:intergenic | 55.0% | |
| AAGCAACCAGGGTCGATTGC+CGG | - | chr8_3:54768835-54768854 | Msa1296070:CDS | 55.0% | |
| GGACCCGCACAACCATGGAT+AGG | + | chr8_3:54768320-54768339 | None:intergenic | 60.0% | |
| ! | CCACCGACTGTCATAGTCGG+TGG | + | chr8_3:54768488-54768507 | None:intergenic | 60.0% |
| ! | CCACCGACTATGACAGTCGG+TGG | - | chr8_3:54768485-54768504 | Msa1296070:CDS | 60.0% |
| CCGACTATGACAGTCGGTGG+AGG | - | chr8_3:54768488-54768507 | Msa1296070:CDS | 60.0% | |
| GACAGTCGGTGGAGGACCAT+TGG | - | chr8_3:54768496-54768515 | Msa1296070:CDS | 60.0% | |
| ! | AGTGGCCCCGATGGTGATGA+TGG | - | chr8_3:54768596-54768615 | Msa1296070:CDS | 60.0% |
| ! | GTGGCCCCGATGGTGATGAT+GGG | - | chr8_3:54768597-54768616 | Msa1296070:CDS | 60.0% |
| !! | CCCCGATGGTGATGATGGGT+TGG | - | chr8_3:54768601-54768620 | Msa1296070:CDS | 60.0% |
| CCGACTGAACCACCACCAAC+AGG | + | chr8_3:54768653-54768672 | None:intergenic | 60.0% | |
| !! | GTTGGTGGTGGTTCAGTCGG+TGG | - | chr8_3:54768653-54768672 | Msa1296070:CDS | 60.0% |
| AGCAACCAGGGTCGATTGCC+GGG | - | chr8_3:54768836-54768855 | Msa1296070:CDS | 60.0% | |
| GGACCCGCACAACCATGGAT+AGG | + | chr8_3:54768320-54768339 | None:intergenic | 60.0% | |
| ! | CCACCGACTGTCATAGTCGG+TGG | + | chr8_3:54768488-54768507 | None:intergenic | 60.0% |
| ! | CCACCGACTATGACAGTCGG+TGG | - | chr8_3:54768485-54768504 | Msa1296070:CDS | 60.0% |
| CCGACTATGACAGTCGGTGG+AGG | - | chr8_3:54768488-54768507 | Msa1296070:CDS | 60.0% | |
| GACAGTCGGTGGAGGACCAT+TGG | - | chr8_3:54768496-54768515 | Msa1296070:CDS | 60.0% | |
| ! | AGTGGCCCCGATGGTGATGA+TGG | - | chr8_3:54768596-54768615 | Msa1296070:CDS | 60.0% |
| ! | GTGGCCCCGATGGTGATGAT+GGG | - | chr8_3:54768597-54768616 | Msa1296070:CDS | 60.0% |
| !! | CCCCGATGGTGATGATGGGT+TGG | - | chr8_3:54768601-54768620 | Msa1296070:CDS | 60.0% |
| CCGACTGAACCACCACCAAC+AGG | + | chr8_3:54768653-54768672 | None:intergenic | 60.0% | |
| !! | GTTGGTGGTGGTTCAGTCGG+TGG | - | chr8_3:54768653-54768672 | Msa1296070:CDS | 60.0% |
| AGCAACCAGGGTCGATTGCC+GGG | - | chr8_3:54768836-54768855 | Msa1296070:CDS | 60.0% | |
| GGTGGTTCAGTCGGTGGCAG+TGG | - | chr8_3:54768659-54768678 | Msa1296070:CDS | 65.0% | |
| GGTTCAGTCGGTGGCAGTGG+TGG | - | chr8_3:54768662-54768681 | Msa1296070:CDS | 65.0% | |
| AGTCGGTGGCAGTGGTGGCT+CGG | - | chr8_3:54768667-54768686 | Msa1296070:CDS | 65.0% | |
| GCAACCAGGGTCGATTGCCG+GGG | - | chr8_3:54768837-54768856 | Msa1296070:CDS | 65.0% | |
| GGTGGTTCAGTCGGTGGCAG+TGG | - | chr8_3:54768659-54768678 | Msa1296070:CDS | 65.0% | |
| GGTTCAGTCGGTGGCAGTGG+TGG | - | chr8_3:54768662-54768681 | Msa1296070:CDS | 65.0% | |
| AGTCGGTGGCAGTGGTGGCT+CGG | - | chr8_3:54768667-54768686 | Msa1296070:CDS | 65.0% | |
| GCAACCAGGGTCGATTGCCG+GGG | - | chr8_3:54768837-54768856 | Msa1296070:CDS | 65.0% | |
| GGCTCCCCGGCAATCGACCC+TGG | + | chr8_3:54768844-54768863 | None:intergenic | 75.0% | |
| GGCTCCCCGGCAATCGACCC+TGG | + | chr8_3:54768844-54768863 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 54768083 | 54768874 | 54768083 | ID=Msa1296070;Name=Msa1296070 |
| chr8_3 | mRNA | 54768083 | 54768874 | 54768083 | ID=Msa1296070-mRNA-1;Parent=Msa1296070;Name=Msa1296070-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|-1|0|1|-1|1|1|0|263 |
| chr8_3 | exon | 54768083 | 54768874 | 54768083 | ID=Msa1296070-mRNA-1:exon:15703;Parent=Msa1296070-mRNA-1 |
| chr8_3 | CDS | 54768083 | 54768874 | 54768083 | ID=Msa1296070-mRNA-1:cds;Parent=Msa1296070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
