AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1297930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297930 MtrunA17_Chr4g0055241 96.936 359 11 0 1 359 1 359 0.0 712
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297930 AT1G32730.1 45.533 347 157 7 18 359 8 327 5.05e-90 273

Find 94 sgRNAs with CRISPR-Local

Find 573 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAGAGGACCCAACCAATTT+TGG 0.186654 8_3:+58584100 None:intergenic
TTGTTCTTTATGCGTGTTTA+TGG 0.188552 8_3:-58591493 Msa1297930:exon
GGATTACTCGTTACCAAAAT+TGG 0.199926 8_3:-58584113 Msa1297930:CDS
CCATTGTTATTGCCTAATTC+TGG 0.271376 8_3:-58583707 Msa1297930:three_prime_UTR
CAATTTGATTTGAAAATTGA+TGG 0.274942 8_3:-58583502 Msa1297930:three_prime_UTR
GCATGTACCTTTCTAGTTAG+TGG 0.276012 8_3:+58584801 None:intergenic
TTCTGACCGCGTTGAGATTT+CGG 0.292064 8_3:+58591393 None:intergenic
TGTAGAATTCTGCCAGAATT+AGG 0.320836 8_3:+58583695 None:intergenic
CTAACGCAAGTTATGATATA+TGG 0.326872 8_3:-58583563 Msa1297930:three_prime_UTR
CATGCAAAATGTAGATTTGC+TGG 0.332643 8_3:-58584596 Msa1297930:CDS
TGTTGTACCAACAAAAGAAT+TGG 0.332649 8_3:-58584134 Msa1297930:CDS
ATCAGCTATAAGTGATCTTC+TGG 0.345352 8_3:-58584299 Msa1297930:CDS
CGCGTGCGAGCGTTGGGTTT+CGG 0.356084 8_3:+58591710 None:intergenic
CTCCTTGTATTCCTTTAACT+TGG 0.360826 8_3:+58584657 None:intergenic
CTGCAAATCCTCCTCACTTC+GGG 0.374251 8_3:+58584261 None:intergenic
CAAAATCCTTGTCCGATTCA+TGG 0.380244 8_3:-58591206 Msa1297930:intron
CGATGAAGCCACCGGTGAAT+TGG 0.381077 8_3:+58591419 None:intergenic
ATTGAACTGAGCAAAACTAT+TGG 0.381132 8_3:+58584854 None:intergenic
CAACTCTTGCATTGCTCATA+AGG 0.383564 8_3:+58591242 None:intergenic
GTGGCAATGTTGCTCGTTCT+AGG 0.384329 8_3:-58591350 Msa1297930:intron
CCTGACAACACTCCATCTTC+TGG 0.385227 8_3:-58589596 Msa1297930:CDS
GGTTTCGGTTCTTAAGAAGC+TGG 0.394698 8_3:+58591725 None:intergenic
ATAAACAAGATCCCCGCAAT+TGG 0.410179 8_3:+58583658 None:intergenic
ATGCTGTATCGTATTATTCA+AGG 0.411377 8_3:-58583958 Msa1297930:three_prime_UTR
CAAACAATGTCTCTAAAATC+AGG 0.416866 8_3:-58583896 Msa1297930:three_prime_UTR
CTGGGTTAAAATTGCAACTA+AGG 0.442245 8_3:-58584480 Msa1297930:CDS
ACTCTGATACATCCAATTGC+GGG 0.443489 8_3:-58583670 Msa1297930:three_prime_UTR
CCAGAAGATGGAGTGTTGTC+AGG 0.449973 8_3:+58589596 None:intergenic
TACCTCATTGTTCTCTGTTG+AGG 0.455001 8_3:+58584510 None:intergenic
AACAATGAGGTAATGATCCC+TGG 0.455916 8_3:-58584499 Msa1297930:CDS
ACTCGTTACCAAAATTGGTT+GGG 0.456983 8_3:-58584108 Msa1297930:CDS
CAATTCACCGGTGGCTTCAT+CGG 0.463160 8_3:-58591418 Msa1297930:CDS
TGCTATGGAAAATTAGAGTT+AGG 0.463701 8_3:-58583931 Msa1297930:three_prime_UTR
AAGCTCAAGTCTGCTGTAGA+TGG 0.465375 8_3:-58584391 Msa1297930:CDS
GTTTCGGTTCTTAAGAAGCT+GGG 0.473370 8_3:+58591726 None:intergenic
TACTCGTTACCAAAATTGGT+TGG 0.478001 8_3:-58584109 Msa1297930:CDS
TTGCCACACTGTTTGCACTT+AGG 0.478682 8_3:+58591366 None:intergenic
TCATTGTTCTCTGTTGAGGT+AGG 0.483950 8_3:+58584514 None:intergenic
GGAGGATTTGCAGTCATGCT+TGG 0.486799 8_3:-58584251 Msa1297930:CDS
ATACTTGTAACTTACATTGA+GGG 0.489055 8_3:+58589536 None:intergenic
TTCGCCGTTGAATTGTTGCT+CGG 0.492476 8_3:+58591462 None:intergenic
AATCTTCGAATAAGAGAAAG+AGG 0.496068 8_3:-58584333 Msa1297930:CDS
TTCCAAGTTAAAGGAATACA+AGG 0.503227 8_3:-58584659 Msa1297930:CDS
GAAGTATCACTGGTTCAGTT+CGG 0.510515 8_3:-58583760 Msa1297930:three_prime_UTR
AAAATTAGAGTTAGGCAAAA+CGG 0.513095 8_3:-58583923 Msa1297930:three_prime_UTR
CGGTGAATTGGTTAGACCTA+GGG 0.515322 8_3:+58591431 None:intergenic
ACTGCAAATCCTCCTCACTT+CGG 0.516635 8_3:+58584260 None:intergenic
AACAATTCAACGGCGAAAGT+CGG 0.518604 8_3:-58591456 Msa1297930:CDS
ATTATTCAAGGAAAATGCTA+TGG 0.521553 8_3:-58583946 Msa1297930:three_prime_UTR
GAGCCAAACTGACCATGAAT+CGG 0.522883 8_3:+58591194 None:intergenic
TTTGAAAATTGATGGCTTCG+TGG 0.525257 8_3:-58583494 None:intergenic
TACTTGTAACTTACATTGAG+GGG 0.528131 8_3:+58589537 None:intergenic
AGTGGGGCAGCACCAGAAGA+TGG 0.528171 8_3:+58589584 None:intergenic
ACGGCGAAAGTCGGAACCCT+AGG 0.532431 8_3:-58591447 Msa1297930:CDS
TCAGTTGATTCGAAGAAAGA+AGG 0.534531 8_3:+58591558 None:intergenic
AAAGAAGCCACTAACTAGAA+AGG 0.540503 8_3:-58584808 Msa1297930:intron
GGATTTGCAGTCATGCTTGG+AGG 0.551796 8_3:-58584248 Msa1297930:CDS
CCGGTGAATTGGTTAGACCT+AGG 0.552174 8_3:+58591430 None:intergenic
ATGCTGCAGCTATCAATGAA+TGG 0.555763 8_3:-58584687 Msa1297930:CDS
GATTCGAAAAGAAGTATCAC+TGG 0.562421 8_3:-58583770 Msa1297930:three_prime_UTR
GAGAATGTAGAGCAGTTATG+AGG 0.563614 8_3:-58584028 Msa1297930:exon
TACTCTGATACATCCAATTG+CGG 0.572881 8_3:-58583671 Msa1297930:three_prime_UTR
ACTAATGACGACTTCATCAC+AGG 0.583106 8_3:+58583733 None:intergenic
AGTGTTGTCAGGAATTGTAC+TGG 0.583392 8_3:+58589607 None:intergenic
GCTCGCACGCGGTTAAGCAA+GGG 0.591089 8_3:-58591698 Msa1297930:five_prime_UTR
TATCACTGGTTCAGTTCGGA+TGG 0.593357 8_3:-58583756 Msa1297930:three_prime_UTR
CCTAGGTCTAACCAATTCAC+CGG 0.595091 8_3:-58591430 Msa1297930:CDS
ACAATGAGGTAATGATCCCT+GGG 0.596258 8_3:-58584498 Msa1297930:CDS
TGAGGATGTGTCTTCTGCAT+CGG 0.596526 8_3:-58584545 Msa1297930:CDS
TTTATGCGTGTTTATGGCGA+CGG 0.597303 8_3:-58591487 Msa1297930:exon
TTCAGACGAAGACTCTGCTA+TGG 0.603260 8_3:-58584206 Msa1297930:CDS
CATCAGAATCAAACTGCTGA+AGG 0.604583 8_3:-58584160 Msa1297930:CDS
ACTTGTAACTTACATTGAGG+GGG 0.608500 8_3:+58589538 None:intergenic
TTCGGCGCCGATGAAGCCAC+CGG 0.612425 8_3:+58591411 None:intergenic
AGTTTCTTGATCAATTTCAG+AGG 0.613144 8_3:+58584084 None:intergenic
GGCACCGAGCAACAATTCAA+CGG 0.620139 8_3:-58591466 Msa1297930:CDS
ATCTGTGAAGCATTCAGATG+AGG 0.622176 8_3:-58584563 Msa1297930:CDS
CGAAACCCAACGCTCGCACG+CGG 0.627920 8_3:-58591709 Msa1297930:five_prime_UTR
TTTCGGTTCTTAAGAAGCTG+GGG 0.628082 8_3:+58591727 None:intergenic
TCAAACTCGACAAGAAGTGA+TGG 0.628297 8_3:-58584457 Msa1297930:CDS
TTCGGTTCTTAAGAAGCTGG+GGG 0.629316 8_3:+58591728 None:intergenic
TAACAAAGCCCGAAGTGAGG+AGG 0.633319 8_3:-58584269 Msa1297930:CDS
CAAGGAGCGAAATGTTGAAG+CGG 0.634300 8_3:-58584641 Msa1297930:CDS
CTCTGATACATCCAATTGCG+GGG 0.636416 8_3:-58583669 Msa1297930:three_prime_UTR
GGATGTGTCTTCTGCATCGG+AGG 0.640331 8_3:-58584542 Msa1297930:CDS
AATTAACAAAGCCCGAAGTG+AGG 0.646396 8_3:-58584272 Msa1297930:CDS
CTTGTAACTTACATTGAGGG+GGG 0.654924 8_3:+58589539 None:intergenic
CCAGAATTAGGCAATAACAA+TGG 0.660725 8_3:+58583707 None:intergenic
AACTGACCATGAATCGGACA+AGG 0.662088 8_3:+58591200 None:intergenic
AGGTCTAACCAATTCACCGG+TGG 0.674249 8_3:-58591427 Msa1297930:CDS
CTGCAGCTATCAATGAATGG+AGG 0.684130 8_3:-58584684 Msa1297930:CDS
AAACCTAAGTGCAAACAGTG+TGG 0.715094 8_3:-58591369 Msa1297930:CDS
TACCTCAACAGAGAACAATG+AGG 0.742329 8_3:-58584512 Msa1297930:CDS
TCGGCGCCGAAATCTCAACG+CGG 0.850645 8_3:-58591399 Msa1297930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTTATGAAATTGTA+GGG + chr8_3:58583622-58583641 None:intergenic 10.0%
!!! TTTTATTTTTATGAAATTGT+AGG + chr8_3:58583623-58583642 None:intergenic 10.0%
!! AAAAATAGTAAAAATTAATG+GGG + chr8_3:58583651-58583670 None:intergenic 10.0%
!! GAAAAATAGTAAAAATTAAT+GGG + chr8_3:58583652-58583671 None:intergenic 10.0%
!! ATAAAATAAAAAATCAGAAT+TGG + chr8_3:58583957-58583976 None:intergenic 10.0%
!!! TGATTTTTTATTTTATTTTC+AGG - chr8_3:58583961-58583980 Msa1297930:three_prime_UTR 10.0%
!! TCTTTATTGAAAAATAAATT+TGG - chr8_3:58585808-58585827 Msa1297930:intron 10.0%
!!! ATTTTTTGTATTATTTGATT+TGG - chr8_3:58586065-58586084 Msa1297930:intron 10.0%
!!! TATGTTTAAATGAAATTTTA+GGG + chr8_3:58587500-58587519 None:intergenic 10.0%
!! AAAATAGTAAAAATTAATGG+GGG + chr8_3:58583650-58583669 None:intergenic 15.0%
!! GGAAAAATAGTAAAAATTAA+TGG + chr8_3:58583653-58583672 None:intergenic 15.0%
!!! ATTCAGTATTATTTTTGTTT+TGG - chr8_3:58584925-58584944 Msa1297930:intron 15.0%
!!! TAGCTTATATATTTTGAAAT+TGG - chr8_3:58585308-58585327 Msa1297930:intron 15.0%
!! ATGAATATGATATAAAAGTA+GGG + chr8_3:58585724-58585743 None:intergenic 15.0%
!! AATGAATATGATATAAAAGT+AGG + chr8_3:58585725-58585744 None:intergenic 15.0%
!! TATTGAAAAATAAATTTGGT+TGG - chr8_3:58585839-58585858 Msa1297930:intron 15.0%
!! TTTACAATAACTTGATTTAT+TGG + chr8_3:58586746-58586765 None:intergenic 15.0%
!!! GTATGTTTAAATGAAATTTT+AGG + chr8_3:58587501-58587520 None:intergenic 15.0%
!! AAAATTTCATTTAAACATAC+TGG - chr8_3:58587501-58587520 Msa1297930:intron 15.0%
!! AAATTTCATTTAAACATACT+GGG - chr8_3:58587502-58587521 Msa1297930:intron 15.0%
!! AATAAAAAAACTAAGCATAT+AGG - chr8_3:58589893-58589912 Msa1297930:intron 15.0%
!! ATAAAAAAACTAAGCATATA+GGG - chr8_3:58589894-58589913 Msa1297930:intron 15.0%
!! GAAAAATTTGAAGGAAAAAT+GGG + chr8_3:58583583-58583602 None:intergenic 20.0%
!! AGAAAAATTTGAAGGAAAAA+TGG + chr8_3:58583584-58583603 None:intergenic 20.0%
!!! AAATTGTAGGGTTAATTTTT+GGG + chr8_3:58583610-58583629 None:intergenic 20.0%
!! AATCAAAGTTTGAAAGAAAA+AGG + chr8_3:58583912-58583931 None:intergenic 20.0%
!!! TATATATTTTGAATCCTTGA+TGG - chr8_3:58584131-58584150 Msa1297930:CDS 20.0%
!!! AAATAATTTGTATTGTGCAA+TGG + chr8_3:58584517-58584536 None:intergenic 20.0%
!! AAAGTTTCAAATCATAAACA+AGG + chr8_3:58584883-58584902 None:intergenic 20.0%
!!! AGTATTATTTTTGTTTTGGT+AGG - chr8_3:58584929-58584948 Msa1297930:intron 20.0%
!!! TTCTACTCAATTAATTTTGT+AGG + chr8_3:58585011-58585030 None:intergenic 20.0%
!! TATCTTAATTACTATTACTC+TGG + chr8_3:58585255-58585274 None:intergenic 20.0%
!!! TCTTGAATTCTTTTATTTGA+CGG - chr8_3:58585359-58585378 Msa1297930:intron 20.0%
!!! TCACTAAAATTTTGGAATTT+AGG - chr8_3:58586149-58586168 Msa1297930:intron 20.0%
!!! CACTAAAATTTTGGAATTTA+GGG - chr8_3:58586150-58586169 Msa1297930:intron 20.0%
!!! AACTTTAAAGTATCAAGATT+TGG + chr8_3:58587029-58587048 None:intergenic 20.0%
!!! GTTTTTGACATGTTATTTTA+GGG + chr8_3:58587805-58587824 None:intergenic 20.0%
!!! TGTTTTTGACATGTTATTTT+AGG + chr8_3:58587806-58587825 None:intergenic 20.0%
!! GTTTATTAATTAAGTAACTG+TGG - chr8_3:58588254-58588273 Msa1297930:intron 20.0%
!!! AACAAGGTTTTATATATACA+GGG + chr8_3:58589924-58589943 None:intergenic 20.0%
!! TAAAACTGAAAGAGTAATAA+AGG + chr8_3:58590000-58590019 None:intergenic 20.0%
!! TAAAATAATCAAGTGTACTT+GGG - chr8_3:58590148-58590167 Msa1297930:intron 20.0%
!! TTGGGTAAACAAATAATAAA+TGG - chr8_3:58590166-58590185 Msa1297930:intron 20.0%
!!! AATGGAATGAAATTTTTGAA+AGG - chr8_3:58590184-58590203 Msa1297930:intron 20.0%
!!! ATGGAATGAAATTTTTGAAA+GGG - chr8_3:58590185-58590204 Msa1297930:intron 20.0%
!! ATAAAAAAAACTGTAGATGA+TGG - chr8_3:58590808-58590827 Msa1297930:intron 20.0%
!!! CAATTTGATTTGAAAATTGA+TGG - chr8_3:58591727-58591746 Msa1297930:five_prime_UTR 20.0%
!! GAAATTGTAGGGTTAATTTT+TGG + chr8_3:58583611-58583630 None:intergenic 25.0%
!! AATTTTCGTTTTCGTTTCAA+CGG + chr8_3:58583715-58583734 None:intergenic 25.0%
! GCTGAAATGTTGAAATTTAA+TGG - chr8_3:58584178-58584197 Msa1297930:CDS 25.0%
!!! AATTATTTTACCGTTACGTT+AGG - chr8_3:58584254-58584273 Msa1297930:CDS 25.0%
! TGAAATTTAACCTAACGTAA+CGG + chr8_3:58584267-58584286 None:intergenic 25.0%
!! GCAAGATAGAGAATTTTTAT+TGG - chr8_3:58584346-58584365 Msa1297930:CDS 25.0%
!! TATGTTTAGGATTTGAGATT+TGG - chr8_3:58584848-58584867 Msa1297930:CDS 25.0%
!! TTATGATTTGAAACTTTGAG+TGG - chr8_3:58584886-58584905 Msa1297930:CDS 25.0%
!! TTAATTTTGTAGGATCTAGA+GGG + chr8_3:58585001-58585020 None:intergenic 25.0%
!! ATTAATTTTGTAGGATCTAG+AGG + chr8_3:58585002-58585021 None:intergenic 25.0%
!!! TTGTATTTTCCTGTTTCTTT+TGG - chr8_3:58585174-58585193 Msa1297930:intron 25.0%
!!! CTATTACTCTGGAATAAAAA+AGG + chr8_3:58585244-58585263 None:intergenic 25.0%
! GATATTGTAAATCTTGCAAA+AGG + chr8_3:58585497-58585516 None:intergenic 25.0%
! ATACTTGTAACTTACATTGA+GGG + chr8_3:58585696-58585715 None:intergenic 25.0%
!!! CAAATAAACCTTTGAAACTT+TGG + chr8_3:58585999-58586018 None:intergenic 25.0%
!! TATACCAGTCACTAAAATTT+TGG - chr8_3:58586141-58586160 Msa1297930:intron 25.0%
!!! AATTCCAAAATTTTAGTGAC+TGG + chr8_3:58586148-58586167 None:intergenic 25.0%
! CGTATTACATAAACCATAAA+TGG + chr8_3:58586177-58586196 None:intergenic 25.0%
! ATTGCTAAATTCTATTGCAT+AGG + chr8_3:58586293-58586312 None:intergenic 25.0%
! ATTATGACAAAAAACAGTAG+TGG - chr8_3:58586588-58586607 Msa1297930:intron 25.0%
! ACAATAACTTGATTTATTGG+TGG + chr8_3:58586743-58586762 None:intergenic 25.0%
! TTTACTGAAAACCAAATTTC+AGG - chr8_3:58586929-58586948 Msa1297930:intron 25.0%
!!! TACTTTAAAGTTAGTAGACA+TGG - chr8_3:58587037-58587056 Msa1297930:intron 25.0%
!!! ACTTTAAAGTTAGTAGACAT+GGG - chr8_3:58587038-58587057 Msa1297930:intron 25.0%
!!! TTTAGGGTTTTCTTTAATGA+CGG + chr8_3:58587789-58587808 None:intergenic 25.0%
! AAAAAAGTTGTAGAAGAAAG+TGG + chr8_3:58588099-58588118 None:intergenic 25.0%
! TATATGTCAATTTGTGAATC+TGG - chr8_3:58588314-58588333 Msa1297930:intron 25.0%
! TAAACTGATGAATCATAACA+AGG + chr8_3:58588354-58588373 None:intergenic 25.0%
! AATCATGTAAAGTTGTATCT+TGG + chr8_3:58588884-58588903 None:intergenic 25.0%
!! ACATGATTTGTAAGTTTGTA+TGG - chr8_3:58588896-58588915 Msa1297930:intron 25.0%
!!! ACTATTTTTAATTCCTTTGC+TGG - chr8_3:58589010-58589029 Msa1297930:intron 25.0%
! AGTTTCACAATATTCTCATA+AGG + chr8_3:58589175-58589194 None:intergenic 25.0%
! TAATATTTGAATCGAAGTCA+TGG + chr8_3:58589326-58589345 None:intergenic 25.0%
!! TTTTATCATTTGGAAAACAG+AGG + chr8_3:58589659-58589678 None:intergenic 25.0%
!! TAAGGTCTCTTTTTATCATT+TGG + chr8_3:58589669-58589688 None:intergenic 25.0%
!! CAGGAACAATAATTTTTGTA+AGG + chr8_3:58589687-58589706 None:intergenic 25.0%
! ATTATTGTTCCTGATACAAA+TGG - chr8_3:58589694-58589713 Msa1297930:intron 25.0%
!!! CAACAAGGTTTTATATATAC+AGG + chr8_3:58589925-58589944 None:intergenic 25.0%
!! TTCCTCTCTTATTTAAACAT+TGG + chr8_3:58590080-58590099 None:intergenic 25.0%
! GTAAAATAATCAAGTGTACT+TGG - chr8_3:58590147-58590166 Msa1297930:intron 25.0%
!!! TGGAATGAAATTTTTGAAAG+GGG - chr8_3:58590186-58590205 Msa1297930:intron 25.0%
! AAAAAACAAAATGATCCTCA+GGG + chr8_3:58590313-58590332 None:intergenic 25.0%
! TAAAAAACAAAATGATCCTC+AGG + chr8_3:58590314-58590333 None:intergenic 25.0%
!! AATCTACATTTTGCATGTAT+CGG + chr8_3:58590630-58590649 None:intergenic 25.0%
!! ACTTATAGCTGATAACTTTT+CGG + chr8_3:58590923-58590942 None:intergenic 25.0%
! ATTATTCAAGGAAAATGCTA+TGG - chr8_3:58591283-58591302 Msa1297930:intron 25.0%
! AAAATTAGAGTTAGGCAAAA+CGG - chr8_3:58591306-58591325 Msa1297930:intron 25.0%
! GATTCAACTAGTTCAAAAAA+TGG + chr8_3:58591366-58591385 None:intergenic 25.0%
AATTTGAAGGAAAAATGGGT+GGG + chr8_3:58583579-58583598 None:intergenic 30.0%
AAATTTGAAGGAAAAATGGG+TGG + chr8_3:58583580-58583599 None:intergenic 30.0%
TTGGGAAGAGAAAAATTTGA+AGG + chr8_3:58583592-58583611 None:intergenic 30.0%
TTGTTCTTTATGCGTGTTTA+TGG - chr8_3:58583736-58583755 Msa1297930:three_prime_UTR 30.0%
TGTTCAAACATCGAGTTAAA+CGG + chr8_3:58584410-58584429 None:intergenic 30.0%
ATTATTACGAAACTGAAGCT+AGG - chr8_3:58584537-58584556 Msa1297930:CDS 30.0%
TTATTACGAAACTGAAGCTA+GGG - chr8_3:58584538-58584557 Msa1297930:CDS 30.0%
!! TGTTTTCACGTTATTTCACA+GGG + chr8_3:58584748-58584767 None:intergenic 30.0%
!! ATGTTTTCACGTTATTTCAC+AGG + chr8_3:58584749-58584768 None:intergenic 30.0%
TAACGTGAAAACATGAAATC+AGG - chr8_3:58584755-58584774 Msa1297930:intron 30.0%
!! GACTCGATTGTTTTATGTTT+AGG - chr8_3:58584835-58584854 Msa1297930:CDS 30.0%
TTGGTAGGATCTTTCAAATT+TGG - chr8_3:58584944-58584963 Msa1297930:intron 30.0%
! TAATTTTGTAGGATCTAGAG+GGG + chr8_3:58585000-58585019 None:intergenic 30.0%
ATATTGTATCAGATCGAAAG+GGG + chr8_3:58585078-58585097 None:intergenic 30.0%
GATATTGTATCAGATCGAAA+GGG + chr8_3:58585079-58585098 None:intergenic 30.0%
AGATATTGTATCAGATCGAA+AGG + chr8_3:58585080-58585099 None:intergenic 30.0%
TCCTTACTTTCATGAGTATT+TGG - chr8_3:58585111-58585130 Msa1297930:intron 30.0%
CCTTACTTTCATGAGTATTT+GGG - chr8_3:58585112-58585131 Msa1297930:intron 30.0%
TAATTAAGATACTGCCTTTC+TGG - chr8_3:58585264-58585283 Msa1297930:intron 30.0%
! TGTTAGGATCTTTCAAGTAT+GGG + chr8_3:58585550-58585569 None:intergenic 30.0%
! TTGTTAGGATCTTTCAAGTA+TGG + chr8_3:58585551-58585570 None:intergenic 30.0%
ACCATATGACATGAAAAAGA+GGG + chr8_3:58585585-58585604 None:intergenic 30.0%
TACTTGTAACTTACATTGAG+GGG + chr8_3:58585695-58585714 None:intergenic 30.0%
GATACTTGTAACTTACATTG+AGG + chr8_3:58585697-58585716 None:intergenic 30.0%
!!! GTTGGAAACTTTGTTTTTTG+CGG - chr8_3:58585857-58585876 Msa1297930:intron 30.0%
!! CTATTCTTCTTTTGAAAGCT+TGG - chr8_3:58585890-58585909 Msa1297930:intron 30.0%
GGTATATACAAGATAACTGT+AGG + chr8_3:58585943-58585962 None:intergenic 30.0%
! CATGCTATTTGCTACAATAT+TGG - chr8_3:58585973-58585992 Msa1297930:intron 30.0%
AATATTGGCCAAAGTTTCAA+AGG - chr8_3:58585988-58586007 Msa1297930:intron 30.0%
TACATTGTATCAATCACAAG+AGG + chr8_3:58586366-58586385 None:intergenic 30.0%
!! TCATAATTGAAGTGTTGTTG+TGG + chr8_3:58586575-58586594 None:intergenic 30.0%
! AAACAAGATTGGTCAGTTAT+GGG + chr8_3:58586912-58586931 None:intergenic 30.0%
! TAAACAAGATTGGTCAGTTA+TGG + chr8_3:58586913-58586932 None:intergenic 30.0%
! TGGTTTTCAGTAAACAAGAT+TGG + chr8_3:58586923-58586942 None:intergenic 30.0%
TAAAACTGAAGATCCATTCA+TGG - chr8_3:58586996-58587015 Msa1297930:intron 30.0%
AAAACTGAAGATCCATTCAT+GGG - chr8_3:58586997-58587016 Msa1297930:intron 30.0%
! TGTGCATATTGACTATTTGT+GGG + chr8_3:58587157-58587176 None:intergenic 30.0%
! ATGTGCATATTGACTATTTG+TGG + chr8_3:58587158-58587177 None:intergenic 30.0%
! TGTTGAGTTGCTGAAAAAAT+GGG + chr8_3:58587546-58587565 None:intergenic 30.0%
! ATGTTGAGTTGCTGAAAAAA+TGG + chr8_3:58587547-58587566 None:intergenic 30.0%
ACATGTCAAAAACACATGAA+AGG - chr8_3:58587812-58587831 Msa1297930:intron 30.0%
TATGCTTTGCTTTCTACTAA+AGG - chr8_3:58587895-58587914 Msa1297930:intron 30.0%
ATGCTTTGCTTTCTACTAAA+GGG - chr8_3:58587896-58587915 Msa1297930:intron 30.0%
! TTACCCTAATTTTACACAAG+GGG + chr8_3:58587982-58588001 None:intergenic 30.0%
! CTTACCCTAATTTTACACAA+GGG + chr8_3:58587983-58588002 None:intergenic 30.0%
TAAAGATTGAGATCCTACAT+AGG + chr8_3:58588400-58588419 None:intergenic 30.0%
! CAAAAAGTATGGCTTAGTAT+GGG + chr8_3:58588442-58588461 None:intergenic 30.0%
! ACAAAAAGTATGGCTTAGTA+TGG + chr8_3:58588443-58588462 None:intergenic 30.0%
!! TTTCCAATGTACTGATTCTT+TGG - chr8_3:58588532-58588551 Msa1297930:intron 30.0%
TGTCTTTGTTAACTCATATG+TGG - chr8_3:58588668-58588687 Msa1297930:intron 30.0%
! TTTTAGTCATGTAAACAGGA+AGG + chr8_3:58588709-58588728 None:intergenic 30.0%
GAGGATCTAAAAACATTTGT+GGG + chr8_3:58588817-58588836 None:intergenic 30.0%
TGAGGATCTAAAAACATTTG+TGG + chr8_3:58588818-58588837 None:intergenic 30.0%
! TCTACAACAAGAAGTGTAAT+GGG + chr8_3:58588851-58588870 None:intergenic 30.0%
! ATCTACAACAAGAAGTGTAA+TGG + chr8_3:58588852-58588871 None:intergenic 30.0%
TTGTAAGTTTGTATGGTTGA+TGG - chr8_3:58588903-58588922 Msa1297930:intron 30.0%
TGTAAGTTTGTATGGTTGAT+GGG - chr8_3:58588904-58588923 Msa1297930:intron 30.0%
! ATCATTGGCAAGGAAATTTT+GGG + chr8_3:58588961-58588980 None:intergenic 30.0%
ACTTTATCCAATGACATCAT+TGG + chr8_3:58588976-58588995 None:intergenic 30.0%
!! TTGATTTGGAAATCTCACAA+TGG - chr8_3:58589033-58589052 Msa1297930:intron 30.0%
! TGATTTGGAAATCTCACAAT+GGG - chr8_3:58589034-58589053 Msa1297930:intron 30.0%
TAATGTCATTAACAACAAGC+CGG + chr8_3:58589080-58589099 None:intergenic 30.0%
!! GCTTGTTGTTAATGACATTA+AGG - chr8_3:58589080-58589099 Msa1297930:intron 30.0%
GAATATTGTGAAACTTGATG+TGG - chr8_3:58589180-58589199 Msa1297930:intron 30.0%
TCATAACCTCTTCTAGTAAT+TGG - chr8_3:58589251-58589270 Msa1297930:intron 30.0%
AATGATCCAATTACTAGAAG+AGG + chr8_3:58589260-58589279 None:intergenic 30.0%
!! CTTGCTATTAGATTCACAAA+TGG + chr8_3:58589412-58589431 None:intergenic 30.0%
CCTTCTAATATGCTAAATGA+TGG + chr8_3:58589443-58589462 None:intergenic 30.0%
CCATCATTTAGCATATTAGA+AGG - chr8_3:58589440-58589459 Msa1297930:intron 30.0%
TGGATTATGGAATGCAAATT+TGG - chr8_3:58589552-58589571 Msa1297930:CDS 30.0%
AGGTCTCAGTTATAAAAAGT+TGG - chr8_3:58589726-58589745 Msa1297930:intron 30.0%
! AGTTATAAAAAGTTGGCTTC+TGG - chr8_3:58589733-58589752 Msa1297930:intron 30.0%
TTTATCAAAACCTCGAATCT+TGG + chr8_3:58589871-58589890 None:intergenic 30.0%
TGCAGTAGCATTAAATTTGT+TGG - chr8_3:58589971-58589990 Msa1297930:intron 30.0%
GACGAGTTTCAGTAATTTAA+AGG + chr8_3:58590024-58590043 None:intergenic 30.0%
GTCCAATGTTTAAATAAGAG+AGG - chr8_3:58590075-58590094 Msa1297930:intron 30.0%
! GATTCTTATATTTTTCCCTG+AGG - chr8_3:58590295-58590314 Msa1297930:intron 30.0%
!!! GTTTTTTATATCAGAAGTGC+TGG - chr8_3:58590326-58590345 Msa1297930:intron 30.0%
ATTGAACTGAGCAAAACTAT+TGG + chr8_3:58590378-58590397 None:intergenic 30.0%
TTCCAAGTTAAAGGAATACA+AGG - chr8_3:58590570-58590589 Msa1297930:intron 30.0%
!! TTAGTTGCAATTTTAACCCA+GGG + chr8_3:58590750-58590769 None:intergenic 30.0%
AATCTTCGAATAAGAGAAAG+AGG - chr8_3:58590896-58590915 Msa1297930:intron 30.0%
TGTTGTACCAACAAAAGAAT+TGG - chr8_3:58591095-58591114 Msa1297930:intron 30.0%
! GAGTAATCCAATTCTTTTGT+TGG + chr8_3:58591105-58591124 None:intergenic 30.0%
AGTTTCTTGATCAATTTCAG+AGG + chr8_3:58591148-58591167 None:intergenic 30.0%
!! CAGTTATGAGGAATTTTTAG+TGG - chr8_3:58591213-58591232 Msa1297930:CDS 30.0%
ATGCTGTATCGTATTATTCA+AGG - chr8_3:58591271-58591290 Msa1297930:intron 30.0%
TGCTATGGAAAATTAGAGTT+AGG - chr8_3:58591298-58591317 Msa1297930:intron 30.0%
!! CTGATTTTAGAGACATTGTT+TGG + chr8_3:58591335-58591354 None:intergenic 30.0%
!! CAAACAATGTCTCTAAAATC+AGG - chr8_3:58591333-58591352 Msa1297930:intron 30.0%
!! GGGGATCTTGTTTATATTTT+TGG - chr8_3:58591579-58591598 Msa1297930:five_prime_UTR 30.0%
CTAACGCAAGTTATGATATA+TGG - chr8_3:58591666-58591685 Msa1297930:five_prime_UTR 30.0%
!! TCAGTTGATTCGAAGAAAGA+AGG + chr8_3:58583674-58583693 None:intergenic 35.0%
TTGAACTTGATCGTATGAAG+TGG - chr8_3:58584324-58584343 Msa1297930:CDS 35.0%
TATTACGAAACTGAAGCTAG+GGG - chr8_3:58584539-58584558 Msa1297930:CDS 35.0%
CAGAAAGCAAATTAACCCTA+TGG + chr8_3:58584567-58584586 None:intergenic 35.0%
!! TAGCTACTTTGGTTTGTTAG+AGG - chr8_3:58584601-58584620 Msa1297930:CDS 35.0%
!! TTTGGTTTGTTAGAGGCAAA+AGG - chr8_3:58584608-58584627 Msa1297930:CDS 35.0%
GAGTGAAATCGCAAAATTGT+GGG + chr8_3:58584678-58584697 None:intergenic 35.0%
TGAGTGAAATCGCAAAATTG+TGG + chr8_3:58584679-58584698 None:intergenic 35.0%
AACTCAAAGCTAGAATCGTA+TGG + chr8_3:58584796-58584815 None:intergenic 35.0%
TGAGTAGAATACTTCGATCT+TGG - chr8_3:58585022-58585041 Msa1297930:intron 35.0%
CCCAAATACTCATGAAAGTA+AGG + chr8_3:58585115-58585134 None:intergenic 35.0%
CACTTCTATCCAAAAGAAAC+AGG + chr8_3:58585186-58585205 None:intergenic 35.0%
TAAAAACATCCCCACTTTAG+AGG - chr8_3:58585387-58585406 Msa1297930:intron 35.0%
ATATGACATGAAAAAGAGGG+GGG + chr8_3:58585582-58585601 None:intergenic 35.0%
CATATGACATGAAAAAGAGG+GGG + chr8_3:58585583-58585602 None:intergenic 35.0%
CCATATGACATGAAAAAGAG+GGG + chr8_3:58585584-58585603 None:intergenic 35.0%
CACCATATGACATGAAAAAG+AGG + chr8_3:58585586-58585605 None:intergenic 35.0%
! AAAGGATTTTCGATCAAGTG+GGG + chr8_3:58585664-58585683 None:intergenic 35.0%
! CAAAGGATTTTCGATCAAGT+GGG + chr8_3:58585665-58585684 None:intergenic 35.0%
! TCAAAGGATTTTCGATCAAG+TGG + chr8_3:58585666-58585685 None:intergenic 35.0%
ACTTGTAACTTACATTGAGG+GGG + chr8_3:58585694-58585713 None:intergenic 35.0%
CAAATAGCATGACTTATGTG+AGG + chr8_3:58585964-58585983 None:intergenic 35.0%
TGGAATTTAGGGACCATTTA+TGG - chr8_3:58586161-58586180 Msa1297930:intron 35.0%
AGATGACAGGAGAATGAAAT+TGG + chr8_3:58586391-58586410 None:intergenic 35.0%
AAACACCCTGAGTTTAACAA+GGG + chr8_3:58586414-58586433 None:intergenic 35.0%
AAAACACCCTGAGTTTAACA+AGG + chr8_3:58586415-58586434 None:intergenic 35.0%
! TGGTGAGATTATTTGCTACT+TGG - chr8_3:58586478-58586497 Msa1297930:intron 35.0%
CGTCATAACTATTTCATCAC+TGG + chr8_3:58586505-58586524 None:intergenic 35.0%
! CAAAAAACAGTAGTGGAGAA+AGG - chr8_3:58586595-58586614 Msa1297930:intron 35.0%
! AACAAGATTGGTCAGTTATG+GGG + chr8_3:58586911-58586930 None:intergenic 35.0%
CCATTACTAGACCTGAAATT+TGG + chr8_3:58586943-58586962 None:intergenic 35.0%
! CCAAATTTCAGGTCTAGTAA+TGG - chr8_3:58586940-58586959 Msa1297930:intron 35.0%
! CAGTTTTACAGGTTTGTAGT+GGG + chr8_3:58586984-58587003 None:intergenic 35.0%
! TCAGTTTTACAGGTTTGTAG+TGG + chr8_3:58586985-58587004 None:intergenic 35.0%
! GAATGGATCTTCAGTTTTAC+AGG + chr8_3:58586995-58587014 None:intergenic 35.0%
ATTTGGATTTCTCCCATGAA+TGG + chr8_3:58587012-58587031 None:intergenic 35.0%
GAAAGAATGTTATGGCAGAT+TGG + chr8_3:58587067-58587086 None:intergenic 35.0%
TCTGCCATAACATTCTTTCT+AGG - chr8_3:58587068-58587087 Msa1297930:intron 35.0%
ACCTCCTAGAAAGAATGTTA+TGG + chr8_3:58587075-58587094 None:intergenic 35.0%
ATGTAGTTTGAGTCACTAAC+AGG - chr8_3:58587103-58587122 Msa1297930:intron 35.0%
TGTAGTTTGAGTCACTAACA+GGG - chr8_3:58587104-58587123 Msa1297930:intron 35.0%
TACAATCGTGTGTGCAATAA+AGG + chr8_3:58587239-58587258 None:intergenic 35.0%
!! AGTTGGTCTGATTTTGACAT+AGG - chr8_3:58587270-58587289 Msa1297930:intron 35.0%
! GCTCATGATTTTTACTACCA+TGG + chr8_3:58587590-58587609 None:intergenic 35.0%
TGCAACATGACCAGAAAAAA+TGG + chr8_3:58587716-58587735 None:intergenic 35.0%
TGCTTTGCTTTCTACTAAAG+GGG - chr8_3:58587897-58587916 Msa1297930:intron 35.0%
ACAACCCCTTGTGTAAAATT+AGG - chr8_3:58587975-58587994 Msa1297930:intron 35.0%
CAACCCCTTGTGTAAAATTA+GGG - chr8_3:58587976-58587995 Msa1297930:intron 35.0%
! CCTTACCCTAATTTTACACA+AGG + chr8_3:58587984-58588003 None:intergenic 35.0%
CCTTGTGTAAAATTAGGGTA+AGG - chr8_3:58587981-58588000 Msa1297930:intron 35.0%
GCTACATACAATACACCAAA+TGG - chr8_3:58588003-58588022 Msa1297930:intron 35.0%
ACATACAATACACCAAATGG+TGG - chr8_3:58588006-58588025 Msa1297930:intron 35.0%
CATACAATACACCAAATGGT+GGG - chr8_3:58588007-58588026 Msa1297930:intron 35.0%
TGTCAATTTGTGAATCTGGT+AGG - chr8_3:58588318-58588337 Msa1297930:intron 35.0%
ACGCTTCAGTACAAAAAGTA+TGG + chr8_3:58588453-58588472 None:intergenic 35.0%
TCTCCAAAGAATCAGTACAT+TGG + chr8_3:58588538-58588557 None:intergenic 35.0%
ATTAGTGACATACATCACTC+TGG - chr8_3:58588584-58588603 Msa1297930:intron 35.0%
TTTCTTGCAAGATATCGGTA+GGG + chr8_3:58588643-58588662 None:intergenic 35.0%
ATTTCTTGCAAGATATCGGT+AGG + chr8_3:58588644-58588663 None:intergenic 35.0%
CCACATTTCTTGCAAGATAT+CGG + chr8_3:58588648-58588667 None:intergenic 35.0%
! GTTAACTCATATGTGGATTG+TGG - chr8_3:58588675-58588694 Msa1297930:intron 35.0%
! GCTCTTTTAGTCATGTAAAC+AGG + chr8_3:58588713-58588732 None:intergenic 35.0%
! TACACTTCTTGTTGTAGATG+TGG - chr8_3:58588853-58588872 Msa1297930:intron 35.0%
! TCATTGGCAAGGAAATTTTG+GGG + chr8_3:58588960-58588979 None:intergenic 35.0%
! CATCATTGGCAAGGAAATTT+TGG + chr8_3:58588962-58588981 None:intergenic 35.0%
! AATTCCTTTGCTGGTTGATT+TGG - chr8_3:58589019-58589038 Msa1297930:intron 35.0%
ATTTCCAAATCAACCAGCAA+AGG + chr8_3:58589026-58589045 None:intergenic 35.0%
TTGATTCCACCTTAAGTGTT+TGG - chr8_3:58589109-58589128 Msa1297930:intron 35.0%
TGTTGGAAACCAAACACTTA+AGG + chr8_3:58589121-58589140 None:intergenic 35.0%
ATTGTGAAACTTGATGTGGA+TGG - chr8_3:58589184-58589203 Msa1297930:intron 35.0%
TTGTGAAACTTGATGTGGAT+GGG - chr8_3:58589185-58589204 Msa1297930:intron 35.0%
!! ATTTTGGAAACCGTAGCTAT+TGG - chr8_3:58589213-58589232 Msa1297930:intron 35.0%
!! TTTTGGAAACCGTAGCTATT+GGG - chr8_3:58589214-58589233 Msa1297930:intron 35.0%
GAATTACATGCAATTGCTTG+TGG - chr8_3:58589352-58589371 Msa1297930:intron 35.0%
!!! TGTGGTTTGGTTTTTTGACT+TGG - chr8_3:58589370-58589389 Msa1297930:intron 35.0%
TAGAAGAGAAATAGACAGAG+CGG + chr8_3:58589591-58589610 None:intergenic 35.0%
TTCCTGATACAAATGGAGAT+TGG - chr8_3:58589701-58589720 Msa1297930:intron 35.0%
TCCTGATACAAATGGAGATT+GGG - chr8_3:58589702-58589721 Msa1297930:intron 35.0%
! AAAGAGTCTGGTTTGAAACT+CGG + chr8_3:58589817-58589836 None:intergenic 35.0%
CTGTATGTGAAGTTGAATGT+TGG - chr8_3:58589837-58589856 Msa1297930:intron 35.0%
! AACCTTGTTGATTATGTCAC+TGG - chr8_3:58589935-58589954 Msa1297930:intron 35.0%
! ACCTTGTTGATTATGTCACT+GGG - chr8_3:58589936-58589955 Msa1297930:intron 35.0%
ATGCAACACTTATTGCTAAG+CGG - chr8_3:58590115-58590134 Msa1297930:intron 35.0%
TAAATACTACCAGAGCAAAC+TGG + chr8_3:58590233-58590252 None:intergenic 35.0%
AAAGAAGCCACTAACTAGAA+AGG - chr8_3:58590421-58590440 Msa1297930:intron 35.0%
! TGTATGTTGCTTGGAAGTAA+TGG - chr8_3:58590500-58590519 Msa1297930:intron 35.0%
! ATGGAGGTTTTCCAAGTTAA+AGG - chr8_3:58590561-58590580 Msa1297930:intron 35.0%
CTCCTTGTATTCCTTTAACT+TGG + chr8_3:58590575-58590594 None:intergenic 35.0%
!! ATTTTGCATGTATCGGTCAA+AGG + chr8_3:58590623-58590642 None:intergenic 35.0%
CATGCAAAATGTAGATTTGC+TGG - chr8_3:58590633-58590652 Msa1297930:intron 35.0%
!! CTTAGTTGCAATTTTAACCC+AGG + chr8_3:58590751-58590770 None:intergenic 35.0%
CTGGGTTAAAATTGCAACTA+AGG - chr8_3:58590749-58590768 Msa1297930:intron 35.0%
ATCAGCTATAAGTGATCTTC+TGG - chr8_3:58590930-58590949 Msa1297930:intron 35.0%
GGATTACTCGTTACCAAAAT+TGG - chr8_3:58591116-58591135 Msa1297930:intron 35.0%
TACTCGTTACCAAAATTGGT+TGG - chr8_3:58591120-58591139 Msa1297930:intron 35.0%
ACTCGTTACCAAAATTGGTT+GGG - chr8_3:58591121-58591140 Msa1297930:intron 35.0%
!! GATTCGAAAAGAAGTATCAC+TGG - chr8_3:58591459-58591478 Msa1297930:CDS 35.0%
CCAGAATTAGGCAATAACAA+TGG + chr8_3:58591525-58591544 None:intergenic 35.0%
! CCATTGTTATTGCCTAATTC+TGG - chr8_3:58591522-58591541 Msa1297930:five_prime_UTR 35.0%
TGTAGAATTCTGCCAGAATT+AGG + chr8_3:58591537-58591556 None:intergenic 35.0%
TACTCTGATACATCCAATTG+CGG - chr8_3:58591558-58591577 Msa1297930:five_prime_UTR 35.0%
TTTCGGTTCTTAAGAAGCTG+GGG + chr8_3:58583505-58583524 None:intergenic 40.0%
GTTTCGGTTCTTAAGAAGCT+GGG + chr8_3:58583506-58583525 None:intergenic 40.0%
AAGGAAAAATGGGTGGGAAT+TGG + chr8_3:58583573-58583592 None:intergenic 40.0%
TTTATGCGTGTTTATGGCGA+CGG - chr8_3:58583742-58583761 Msa1297930:three_prime_UTR 40.0%
AACAATTCAACGGCGAAAGT+CGG - chr8_3:58583773-58583792 Msa1297930:three_prime_UTR 40.0%
AAACCTAAGTGCAAACAGTG+TGG - chr8_3:58583860-58583879 Msa1297930:three_prime_UTR 40.0%
CAACTCTTGCATTGCTCATA+AGG + chr8_3:58583990-58584009 None:intergenic 40.0%
!!! CGGACAAGGATTTTGATTCT+TGG + chr8_3:58584018-58584037 None:intergenic 40.0%
CAAAATCCTTGTCCGATTCA+TGG - chr8_3:58584023-58584042 Msa1297930:exon 40.0%
AGTTAATCAAGTCGCCATCA+AGG + chr8_3:58584148-58584167 None:intergenic 40.0%
! TGATGGCGACTTGATTAACT+TGG - chr8_3:58584148-58584167 Msa1297930:CDS 40.0%
TCAAAACACATTTACGCGAG+TGG + chr8_3:58584308-58584327 None:intergenic 40.0%
ATTACGAAACTGAAGCTAGG+GGG - chr8_3:58584540-58584559 Msa1297930:CDS 40.0%
ATTTGCTTTCTGCCACTATC+TGG - chr8_3:58584575-58584594 Msa1297930:CDS 40.0%
TTTGCTTTCTGCCACTATCT+GGG - chr8_3:58584576-58584595 Msa1297930:CDS 40.0%
TTCACGATCTGGATCGATAA+GGG + chr8_3:58584702-58584721 None:intergenic 40.0%
ATTCACGATCTGGATCGATA+AGG + chr8_3:58584703-58584722 None:intergenic 40.0%
TCAGGATTCAATTCACGATC+TGG + chr8_3:58584713-58584732 None:intergenic 40.0%
! ACAGGGATTTTACTCAACTC+AGG + chr8_3:58584731-58584750 None:intergenic 40.0%
!! TAGAAAGCTCTAGACCAGAA+AGG + chr8_3:58585281-58585300 None:intergenic 40.0%
! TGGTCTAGAGCTTTCTAACA+TGG - chr8_3:58585284-58585303 Msa1297930:intron 40.0%
ATTGGAAAAATGCCCTCTGA+AGG - chr8_3:58585326-58585345 Msa1297930:intron 40.0%
TTGGAAAAATGCCCTCTGAA+GGG - chr8_3:58585327-58585346 Msa1297930:intron 40.0%
!! GATAAAGCTCCTCTAAAGTG+GGG + chr8_3:58585399-58585418 None:intergenic 40.0%
!! GGATAAAGCTCCTCTAAAGT+GGG + chr8_3:58585400-58585419 None:intergenic 40.0%
! TGGATAAAGCTCCTCTAAAG+TGG + chr8_3:58585401-58585420 None:intergenic 40.0%
! GAGCTTTATCCACAAAGACT+TGG - chr8_3:58585409-58585428 Msa1297930:intron 40.0%
TAACTCACACCAAGTCTTTG+TGG + chr8_3:58585421-58585440 None:intergenic 40.0%
!! CCCCTCTTTTTCATGTCATA+TGG - chr8_3:58585581-58585600 Msa1297930:intron 40.0%
AGTGTTGTCAGGAATTGTAC+TGG + chr8_3:58585625-58585644 None:intergenic 40.0%
CTTGTAACTTACATTGAGGG+GGG + chr8_3:58585693-58585712 None:intergenic 40.0%
!! TCTTCTTTTGAAAGCTTGGC+TGG - chr8_3:58585894-58585913 Msa1297930:intron 40.0%
GGACTTTGTACTTTGTAGTG+CGG - chr8_3:58585915-58585934 Msa1297930:intron 40.0%
! AACTAACAGTTTGAAGCCCA+AGG - chr8_3:58586331-58586350 Msa1297930:intron 40.0%
AGTTTAACAAGGGAGATGAC+AGG + chr8_3:58586404-58586423 None:intergenic 40.0%
TCATCTCCCTTGTTAAACTC+AGG - chr8_3:58586405-58586424 Msa1297930:intron 40.0%
CATCTCCCTTGTTAAACTCA+GGG - chr8_3:58586406-58586425 Msa1297930:intron 40.0%
!! GTTAAACTCAGGGTGTTTTG+AGG - chr8_3:58586416-58586435 Msa1297930:intron 40.0%
GTTATGACGATCAGCTACTT+CGG - chr8_3:58586516-58586535 Msa1297930:intron 40.0%
! AGACTTCAGACATTGATGAC+AGG + chr8_3:58586786-58586805 None:intergenic 40.0%
!! TACAAGGCATTGCTACTCAT+TGG + chr8_3:58586880-58586899 None:intergenic 40.0%
! ACAAGATTGGTCAGTTATGG+GGG + chr8_3:58586910-58586929 None:intergenic 40.0%
GCCATAACATTCTTTCTAGG+AGG - chr8_3:58587071-58587090 Msa1297930:intron 40.0%
CACACACGATTGTAAAGAGA+GGG - chr8_3:58587245-58587264 Msa1297930:intron 40.0%
ACACACGATTGTAAAGAGAG+GGG - chr8_3:58587246-58587265 Msa1297930:intron 40.0%
GTTATGAGCATATGACCACT+GGG - chr8_3:58587304-58587323 Msa1297930:intron 40.0%
TTATGAGCATATGACCACTG+GGG - chr8_3:58587305-58587324 Msa1297930:intron 40.0%
AGTTGCTGAAAAAATGGGTC+AGG + chr8_3:58587541-58587560 None:intergenic 40.0%
AACCACAAGATCTCACACAT+TGG + chr8_3:58587612-58587631 None:intergenic 40.0%
TGTGGTTATGCGATCTTCAT+AGG - chr8_3:58587625-58587644 Msa1297930:intron 40.0%
GCATGGGAAGAATCACAAAT+TGG - chr8_3:58587663-58587682 Msa1297930:intron 40.0%
AATCACAAATTGGCTGGAAG+CGG - chr8_3:58587673-58587692 Msa1297930:intron 40.0%
!!! CATGTGTCAGCCATTTTTTC+TGG - chr8_3:58587703-58587722 Msa1297930:intron 40.0%
AATGTGCAGTAGGCTAGAAA+CGG + chr8_3:58587848-58587867 None:intergenic 40.0%
GCGACAAATTAATGTGCAGT+AGG + chr8_3:58587858-58587877 None:intergenic 40.0%
GCTTTGCTTTCTACTAAAGG+GGG - chr8_3:58587898-58587917 Msa1297930:intron 40.0%
ACATGACAACAACTTTACCG+AGG + chr8_3:58587924-58587943 None:intergenic 40.0%
GTCATGTGACTGAAAGATCA+CGG - chr8_3:58587937-58587956 Msa1297930:intron 40.0%
TCATGTGACTGAAAGATCAC+GGG - chr8_3:58587938-58587957 Msa1297930:intron 40.0%
AGTGGAAAGCAAAGCGTAAA+GGG + chr8_3:58588081-58588100 None:intergenic 40.0%
AAGTGGAAAGCAAAGCGTAA+AGG + chr8_3:58588082-58588101 None:intergenic 40.0%
TTGAGATCCTACATAGGATC+AGG + chr8_3:58588394-58588413 None:intergenic 40.0%
CCGATATCTTGCAAGAAATG+TGG - chr8_3:58588645-58588664 Msa1297930:intron 40.0%
ATGACTAAAAGAGCCACACA+TGG - chr8_3:58588719-58588738 Msa1297930:intron 40.0%
CAAGACCAGTTATGGGAAAT+AGG + chr8_3:58588772-58588791 None:intergenic 40.0%
! CTATTTCCCATAACTGGTCT+TGG - chr8_3:58588770-58588789 Msa1297930:intron 40.0%
AAGTGAAACAGAAACTGCAC+CGG + chr8_3:58588935-58588954 None:intergenic 40.0%
TTCCTTGCCAATGATGTCAT+TGG - chr8_3:58588966-58588985 Msa1297930:intron 40.0%
ATCCAATGACATCATTGGCA+AGG + chr8_3:58588971-58588990 None:intergenic 40.0%
!!! TGGGAGTTTTTTTTCCCGAA+AGG - chr8_3:58589053-58589072 Msa1297930:intron 40.0%
!!! GTTTTTTTTCCCGAAAGGAC+CGG - chr8_3:58589058-58589077 Msa1297930:intron 40.0%
TGGAAACCAAACACTTAAGG+TGG + chr8_3:58589118-58589137 None:intergenic 40.0%
! ACGACATGAGGTTTGTTTCT+TGG - chr8_3:58589146-58589165 Msa1297930:intron 40.0%
AAACCGTAGCTATTGGGTTA+TGG - chr8_3:58589220-58589239 Msa1297930:intron 40.0%
ACATGCAATTGCTTGTGGTT+TGG - chr8_3:58589357-58589376 Msa1297930:intron 40.0%
ACAATGGTTACCTTCCAACA+AGG + chr8_3:58589501-58589520 None:intergenic 40.0%
AAGGTAACCATTGTGCAGAT+TGG - chr8_3:58589507-58589526 Msa1297930:intron 40.0%
TTGCATTCCATAATCCAAGC+TGG + chr8_3:58589549-58589568 None:intergenic 40.0%
AGAAGAGAAATAGACAGAGC+GGG + chr8_3:58589590-58589609 None:intergenic 40.0%
TCTCTTCTAGCAGATGCATT+AGG - chr8_3:58589602-58589621 Msa1297930:CDS 40.0%
TTTGGAAAACAGAGGAGACT+AGG + chr8_3:58589651-58589670 None:intergenic 40.0%
TCCCAATCTCCATTTGTATC+AGG + chr8_3:58589706-58589725 None:intergenic 40.0%
GATACAAATGGAGATTGGGA+AGG - chr8_3:58589706-58589725 Msa1297930:intron 40.0%
ACATAGCTAGTTGCAAGATC+TGG - chr8_3:58589786-58589805 Msa1297930:intron 40.0%
CTTCACATACAGAAAGAGTC+TGG + chr8_3:58589829-58589848 None:intergenic 40.0%
GGAAACAATTCCAAGATTCG+AGG - chr8_3:58589858-58589877 Msa1297930:intron 40.0%
! CCTTGTTGATTATGTCACTG+GGG - chr8_3:58589937-58589956 Msa1297930:intron 40.0%
! CTTGTTGATTATGTCACTGG+GGG - chr8_3:58589938-58589957 Msa1297930:intron 40.0%
! TTTGAACTTCCAGTTTGCTC+TGG - chr8_3:58590221-58590240 Msa1297930:intron 40.0%
!! GCATGTACCTTTCTAGTTAG+TGG + chr8_3:58590431-58590450 None:intergenic 40.0%
ATGCTGCAGCTATCAATGAA+TGG - chr8_3:58590542-58590561 Msa1297930:intron 40.0%
! ATCTGTGAAGCATTCAGATG+AGG - chr8_3:58590666-58590685 Msa1297930:intron 40.0%
TCATTGTTCTCTGTTGAGGT+AGG + chr8_3:58590718-58590737 None:intergenic 40.0%
TACCTCAACAGAGAACAATG+AGG - chr8_3:58590717-58590736 Msa1297930:intron 40.0%
TACCTCATTGTTCTCTGTTG+AGG + chr8_3:58590722-58590741 None:intergenic 40.0%
AACAATGAGGTAATGATCCC+TGG - chr8_3:58590730-58590749 Msa1297930:intron 40.0%
ACAATGAGGTAATGATCCCT+GGG - chr8_3:58590731-58590750 Msa1297930:intron 40.0%
TCAAACTCGACAAGAAGTGA+TGG - chr8_3:58590772-58590791 Msa1297930:intron 40.0%
AATTAACAAAGCCCGAAGTG+AGG - chr8_3:58590957-58590976 Msa1297930:intron 40.0%
CATCAGAATCAAACTGCTGA+AGG - chr8_3:58591069-58591088 Msa1297930:intron 40.0%
GAGAATGTAGAGCAGTTATG+AGG - chr8_3:58591201-58591220 Msa1297930:intron 40.0%
!! GAAGTATCACTGGTTCAGTT+CGG - chr8_3:58591469-58591488 Msa1297930:CDS 40.0%
ACTAATGACGACTTCATCAC+AGG + chr8_3:58591499-58591518 None:intergenic 40.0%
ACTCTGATACATCCAATTGC+GGG - chr8_3:58591559-58591578 Msa1297930:five_prime_UTR 40.0%
ATAAACAAGATCCCCGCAAT+TGG + chr8_3:58591574-58591593 None:intergenic 40.0%
TTCGGTTCTTAAGAAGCTGG+GGG + chr8_3:58583504-58583523 None:intergenic 45.0%
GGTTTCGGTTCTTAAGAAGC+TGG + chr8_3:58583507-58583526 None:intergenic 45.0%
TTCGCCGTTGAATTGTTGCT+CGG + chr8_3:58583770-58583789 None:intergenic 45.0%
CGGTGAATTGGTTAGACCTA+GGG + chr8_3:58583801-58583820 None:intergenic 45.0%
CCTAGGTCTAACCAATTCAC+CGG - chr8_3:58583799-58583818 Msa1297930:three_prime_UTR 45.0%
TTCTGACCGCGTTGAGATTT+CGG + chr8_3:58583839-58583858 None:intergenic 45.0%
TTGCCACACTGTTTGCACTT+AGG + chr8_3:58583866-58583885 None:intergenic 45.0%
AACTGACCATGAATCGGACA+AGG + chr8_3:58584032-58584051 None:intergenic 45.0%
TGTCCGATTCATGGTCAGTT+TGG - chr8_3:58584032-58584051 Msa1297930:CDS 45.0%
GAGCCAAACTGACCATGAAT+CGG + chr8_3:58584038-58584057 None:intergenic 45.0%
TTTACGCGAGTGGTATGACA+TGG + chr8_3:58584298-58584317 None:intergenic 45.0%
TCGAGTTAAACGGAGATGCA+CGG + chr8_3:58584400-58584419 None:intergenic 45.0%
TTGCTTTCTGCCACTATCTG+GGG - chr8_3:58584577-58584596 Msa1297930:CDS 45.0%
AAGTAGCTAACCCCAGATAG+TGG + chr8_3:58584590-58584609 None:intergenic 45.0%
!! CTATCTGGGGTTAGCTACTT+TGG - chr8_3:58584590-58584609 Msa1297930:CDS 45.0%
!! GGTTTGTTAGAGGCAAAAGG+AGG - chr8_3:58584611-58584630 Msa1297930:CDS 45.0%
! GGGTTTTCACGATTCTGATC+AGG + chr8_3:58584658-58584677 None:intergenic 45.0%
AGGGGGGATGAAAAGTTGTT+AGG + chr8_3:58585566-58585585 None:intergenic 45.0%
GTCTCAAACTCTACTGCAAG+AGG - chr8_3:58586018-58586037 Msa1297930:intron 45.0%
AGTGTAAGCGTAACTCCATG+AGG - chr8_3:58586197-58586216 Msa1297930:intron 45.0%
! CAAGAGGTTAGCTAAGCCTT+GGG + chr8_3:58586350-58586369 None:intergenic 45.0%
! ACAAGAGGTTAGCTAAGCCT+TGG + chr8_3:58586351-58586370 None:intergenic 45.0%
CATAGTCATCACCCTGAGTT+GGG - chr8_3:58586439-58586458 Msa1297930:intron 45.0%
TTGACTTAGAGCCCAACTCA+GGG + chr8_3:58586453-58586472 None:intergenic 45.0%
!! TGAGTTGGGCTCTAAGTCAA+GGG - chr8_3:58586453-58586472 Msa1297930:intron 45.0%
GGAGAAAGGCAACTGTAACT+CGG - chr8_3:58586609-58586628 Msa1297930:intron 45.0%
GGCAACTGTAACTCGGATAA+AGG - chr8_3:58586616-58586635 Msa1297930:intron 45.0%
TGCAGCAAAACTAGTGTGGA+TGG + chr8_3:58586645-58586664 None:intergenic 45.0%
TCACTGCAGCAAAACTAGTG+TGG + chr8_3:58586649-58586668 None:intergenic 45.0%
AACATTCCTGTACTCTGCCT+TGG - chr8_3:58586675-58586694 Msa1297930:intron 45.0%
ATCAGCTTGTAGGCATTCAG+TGG + chr8_3:58586817-58586836 None:intergenic 45.0%
ACTGAATGCCTACAAGCTGA+TGG - chr8_3:58586816-58586835 Msa1297930:intron 45.0%
CTGAATGCCTACAAGCTGAT+GGG - chr8_3:58586817-58586836 Msa1297930:intron 45.0%
TTATGGGGGTCGGTAATACA+AGG + chr8_3:58586896-58586915 None:intergenic 45.0%
! TTTGTGGGCTATAAGTCCAG+AGG + chr8_3:58587142-58587161 None:intergenic 45.0%
GCACACACGATTGTAAAGAG+AGG - chr8_3:58587244-58587263 Msa1297930:intron 45.0%
CACACGATTGTAAAGAGAGG+GGG - chr8_3:58587247-58587266 Msa1297930:intron 45.0%
ATTGTAAAGAGAGGGGGAGT+TGG - chr8_3:58587253-58587272 Msa1297930:intron 45.0%
TTTGACATAGGCATCAGAGC+AGG - chr8_3:58587282-58587301 Msa1297930:intron 45.0%
GGTTATGAGCATATGACCAC+TGG - chr8_3:58587303-58587322 Msa1297930:intron 45.0%
! ACGTCGTTACTATTTGCTGC+TGG - chr8_3:58587371-58587390 Msa1297930:intron 45.0%
! TGCTGGTTATTGTCACAGTG+AGG - chr8_3:58587388-58587407 Msa1297930:intron 45.0%
GCTGGTTATTGTCACAGTGA+GGG - chr8_3:58587389-58587408 Msa1297930:intron 45.0%
CTGAAAAAATGGGTCAGGTC+AGG + chr8_3:58587536-58587555 None:intergenic 45.0%
CGATCTTAACAGCAGTACCA+TGG - chr8_3:58587570-58587589 Msa1297930:intron 45.0%
AGCCAATGTGTGAGATCTTG+TGG - chr8_3:58587607-58587626 Msa1297930:intron 45.0%
GGGAAGAATCACAAATTGGC+TGG - chr8_3:58587667-58587686 Msa1297930:intron 45.0%
!!! TTGCACAGAGCCTTGTTTTG+TGG - chr8_3:58587731-58587750 Msa1297930:intron 45.0%
!!! TGCACAGAGCCTTGTTTTGT+GGG - chr8_3:58587732-58587751 Msa1297930:intron 45.0%
!!! ACGGTGTCGTTTTAAGAACC+GGG + chr8_3:58587770-58587789 None:intergenic 45.0%
!!! GACGGTGTCGTTTTAAGAAC+CGG + chr8_3:58587771-58587790 None:intergenic 45.0%
! TTACACAAGGGGTTGTTTCC+AGG + chr8_3:58587971-58587990 None:intergenic 45.0%
ACTCCTTCCTGATCCTATGT+AGG - chr8_3:58588384-58588403 Msa1297930:intron 45.0%
GATCCTACATAGGATCAGGA+AGG + chr8_3:58588390-58588409 None:intergenic 45.0%
!! AAATCGCAAAGTACCGTGTG+CGG + chr8_3:58588515-58588534 None:intergenic 45.0%
ACATACATCACTCTGGTGAG+TGG - chr8_3:58588591-58588610 Msa1297930:intron 45.0%
CAGTTATGGGAAATAGGCAC+AGG + chr8_3:58588766-58588785 None:intergenic 45.0%
CTGTGCCTATTTCCCATAAC+TGG - chr8_3:58588764-58588783 Msa1297930:intron 45.0%
CCAGATCCAAGACCAGTTAT+GGG + chr8_3:58588779-58588798 None:intergenic 45.0%
TCCAGATCCAAGACCAGTTA+TGG + chr8_3:58588780-58588799 None:intergenic 45.0%
TAACAACAAGCCGGTCCTTT+CGG + chr8_3:58589071-58589090 None:intergenic 45.0%
TCCAACAACAGAACGACATG+AGG - chr8_3:58589134-58589153 Msa1297930:intron 45.0%
ACCTCATGTCGTTCTGTTGT+TGG + chr8_3:58589138-58589157 None:intergenic 45.0%
! ATGTGGATGGGAGCTCATTT+TGG - chr8_3:58589197-58589216 Msa1297930:intron 45.0%
CAGCCATAACCCAATAGCTA+CGG + chr8_3:58589226-58589245 None:intergenic 45.0%
GATGTCTCTAGTAGCCATGA+CGG - chr8_3:58589280-58589299 Msa1297930:intron 45.0%
GAGACATCAATGATCCGTCA+TGG + chr8_3:58589297-58589316 None:intergenic 45.0%
!! TTTGACTTGGAGCGCTGTTA+TGG - chr8_3:58589383-58589402 Msa1297930:intron 45.0%
GTGCTGAAAACACAGGTTCT+AGG + chr8_3:58589477-58589496 None:intergenic 45.0%
ACAAGGTGTGCTGAAAACAC+AGG + chr8_3:58589484-58589503 None:intergenic 45.0%
! GTGTTTTCAGCACACCTTGT+TGG - chr8_3:58589484-58589503 Msa1297930:intron 45.0%
TTTCAGCACACCTTGTTGGA+AGG - chr8_3:58589488-58589507 Msa1297930:intron 45.0%
TGGTAAGCCAATCTGCACAA+TGG + chr8_3:58589517-58589536 None:intergenic 45.0%
!! AGATTGGCTTACCAAGCTCT+GGG - chr8_3:58589523-58589542 Msa1297930:intron 45.0%
AAGAGAAATAGACAGAGCGG+GGG + chr8_3:58589588-58589607 None:intergenic 45.0%
GAAGAGAAATAGACAGAGCG+GGG + chr8_3:58589589-58589608 None:intergenic 45.0%
CCCCAGTGACATAATCAACA+AGG + chr8_3:58589940-58589959 None:intergenic 45.0%
CTAGCAAGCTGTATGTTGCT+TGG - chr8_3:58590491-58590510 Msa1297930:intron 45.0%
ATGGCACTGTGTCTGATTAC+AGG - chr8_3:58590519-58590538 Msa1297930:intron 45.0%
CTGCAGCTATCAATGAATGG+AGG - chr8_3:58590545-58590564 Msa1297930:intron 45.0%
CAAGGAGCGAAATGTTGAAG+CGG - chr8_3:58590588-58590607 Msa1297930:intron 45.0%
TGAGGATGTGTCTTCTGCAT+CGG - chr8_3:58590684-58590703 Msa1297930:intron 45.0%
AAGCTCAAGTCTGCTGTAGA+TGG - chr8_3:58590838-58590857 Msa1297930:intron 45.0%
ACTGCAAATCCTCCTCACTT+CGG + chr8_3:58590972-58590991 None:intergenic 45.0%
TTCAGACGAAGACTCTGCTA+TGG - chr8_3:58591023-58591042 Msa1297930:intron 45.0%
! TCAGAGGACCCAACCAATTT+TGG + chr8_3:58591132-58591151 None:intergenic 45.0%
!! TATCACTGGTTCAGTTCGGA+TGG - chr8_3:58591473-58591492 Msa1297930:CDS 45.0%
CTCTGATACATCCAATTGCG+GGG - chr8_3:58591560-58591579 Msa1297930:five_prime_UTR 45.0%
! GGCACCGAGCAACAATTCAA+CGG - chr8_3:58583763-58583782 Msa1297930:three_prime_UTR 50.0%
CCGGTGAATTGGTTAGACCT+AGG + chr8_3:58583802-58583821 None:intergenic 50.0%
AGGTCTAACCAATTCACCGG+TGG - chr8_3:58583802-58583821 Msa1297930:three_prime_UTR 50.0%
CAATTCACCGGTGGCTTCAT+CGG - chr8_3:58583811-58583830 Msa1297930:three_prime_UTR 50.0%
GTGGCAATGTTGCTCGTTCT+AGG - chr8_3:58583879-58583898 Msa1297930:three_prime_UTR 50.0%
! ATGCCCTCTGAAGGGTGTAT+CGG - chr8_3:58585335-58585354 Msa1297930:intron 50.0%
!! CCAGAAGATGGAGTGTTGTC+AGG + chr8_3:58585636-58585655 None:intergenic 50.0%
CCTGACAACACTCCATCTTC+TGG - chr8_3:58585633-58585652 Msa1297930:intron 50.0%
GTAACTTACATTGAGGGGGG+TGG + chr8_3:58585690-58585709 None:intergenic 50.0%
ACTCTACTGCAAGAGGTAGC+AGG - chr8_3:58586025-58586044 Msa1297930:intron 50.0%
TAAGCGTAACTCCATGAGGC+TGG - chr8_3:58586201-58586220 Msa1297930:intron 50.0%
AAGCGTAACTCCATGAGGCT+GGG - chr8_3:58586202-58586221 Msa1297930:intron 50.0%
GCATAGTCATCACCCTGAGT+TGG - chr8_3:58586438-58586457 Msa1297930:intron 50.0%
CTTGACTTAGAGCCCAACTC+AGG + chr8_3:58586454-58586473 None:intergenic 50.0%
!! CTGAGTTGGGCTCTAAGTCA+AGG - chr8_3:58586452-58586471 Msa1297930:intron 50.0%
TTGATGCCAAGGCAGAGTAC+AGG + chr8_3:58586684-58586703 None:intergenic 50.0%
GCATCAAGTCTGGCCACATT+TGG - chr8_3:58586697-58586716 Msa1297930:intron 50.0%
CAAGTCTGGCCACATTTGGT+TGG - chr8_3:58586701-58586720 Msa1297930:intron 50.0%
AGCAACCAGCCAACCAAATG+TGG + chr8_3:58586713-58586732 None:intergenic 50.0%
TAGACTGCAGAGGCAGAATG+TGG - chr8_3:58586842-58586861 Msa1297930:intron 50.0%
! GATTGGTCAGTTATGGGGGT+CGG + chr8_3:58586906-58586925 None:intergenic 50.0%
ATAAGTCCAGAGGTCGTCCT+CGG + chr8_3:58587132-58587151 None:intergenic 50.0%
!!! AGAGCCTTGTTTTGTGGGTC+AGG - chr8_3:58587737-58587756 Msa1297930:intron 50.0%
TGGTCCTGACCCACAAAACA+AGG + chr8_3:58587744-58587763 None:intergenic 50.0%
!!! TCGTTTTAAGAACCGGGTCG+TGG + chr8_3:58587764-58587783 None:intergenic 50.0%
CTTTCTACTAAAGGGGGCCT+CGG - chr8_3:58587904-58587923 Msa1297930:intron 50.0%
AAGATCACGGGTTCAAGTCC+TGG - chr8_3:58587950-58587969 Msa1297930:intron 50.0%
!! TAAAGAGGAGTACCCGCACA+CGG - chr8_3:58588499-58588518 Msa1297930:intron 50.0%
!! AATCGCAAAGTACCGTGTGC+GGG + chr8_3:58588514-58588533 None:intergenic 50.0%
GATATCGGTAGGGAGTTGAG+TGG + chr8_3:58588633-58588652 None:intergenic 50.0%
TGCGCTTACTTAGCCATGTG+TGG + chr8_3:58588735-58588754 None:intergenic 50.0%
!! CCCATAACTGGTCTTGGATC+TGG - chr8_3:58588776-58588795 Msa1297930:intron 50.0%
! GTAATGGGAGACAAGTCGTG+AGG + chr8_3:58588836-58588855 None:intergenic 50.0%
!! GTATGGTTGATGGGCGTATC+CGG - chr8_3:58588913-58588932 Msa1297930:intron 50.0%
AACAACAAGCCGGTCCTTTC+GGG + chr8_3:58589070-58589089 None:intergenic 50.0%
!! CAGATTGGCTTACCAAGCTC+TGG - chr8_3:58589522-58589541 Msa1297930:intron 50.0%
TAACAAAGCCCGAAGTGAGG+AGG - chr8_3:58590960-58590979 Msa1297930:intron 50.0%
CTGCAAATCCTCCTCACTTC+GGG + chr8_3:58590971-58590990 None:intergenic 50.0%
GGAGGATTTGCAGTCATGCT+TGG - chr8_3:58590978-58590997 Msa1297930:intron 50.0%
GGATTTGCAGTCATGCTTGG+AGG - chr8_3:58590981-58591000 Msa1297930:intron 50.0%
CGATGAAGCCACCGGTGAAT+TGG + chr8_3:58583813-58583832 None:intergenic 55.0%
ACTGAAGCTAGGGGGACCAT+AGG - chr8_3:58584548-58584567 Msa1297930:CDS 55.0%
CTGAAGCTAGGGGGACCATA+GGG - chr8_3:58584549-58584568 Msa1297930:CDS 55.0%
GAGCCGATACACCCTTCAGA+GGG + chr8_3:58585341-58585360 None:intergenic 55.0%
AGAGCCGATACACCCTTCAG+AGG + chr8_3:58585342-58585361 None:intergenic 55.0%
CATTGAGGGGGGTGGTTCAA+AGG + chr8_3:58585682-58585701 None:intergenic 55.0%
GATGAAAGCTCCCAGCCTCA+TGG + chr8_3:58586215-58586234 None:intergenic 55.0%
!! TGGGCTCTAAGTCAAGGGCT+TGG - chr8_3:58586458-58586477 Msa1297930:intron 55.0%
CTCTGCCTTGGCATCAAGTC+TGG - chr8_3:58586687-58586706 Msa1297930:intron 55.0%
TGTGGCCAGACTTGATGCCA+AGG + chr8_3:58586695-58586714 None:intergenic 55.0%
TCTGGCCACATTTGGTTGGC+TGG - chr8_3:58586705-58586724 Msa1297930:intron 55.0%
GTCTACGCCCATCAGCTTGT+AGG + chr8_3:58586827-58586846 None:intergenic 55.0%
TAAGTCCAGAGGTCGTCCTC+GGG + chr8_3:58587131-58587150 None:intergenic 55.0%
! TTATAGCTTGTCGCCGCCAG+CGG + chr8_3:58587341-58587360 None:intergenic 55.0%
GTCTTGTCGAGATCGCGCAT+GGG - chr8_3:58587647-58587666 Msa1297930:intron 55.0%
ACAAATTGGCTGGAAGCGGC+TGG - chr8_3:58587677-58587696 Msa1297930:intron 55.0%
CAAATTGGCTGGAAGCGGCT+GGG - chr8_3:58587678-58587697 Msa1297930:intron 55.0%
! CAAATGGTGGGACCCTTTCC+CGG - chr8_3:58588019-58588038 Msa1297930:intron 55.0%
CTAATGCCCCAGCATACGCA+GGG + chr8_3:58588046-58588065 None:intergenic 55.0%
ACTAATGCCCCAGCATACGC+AGG + chr8_3:58588047-58588066 None:intergenic 55.0%
! ATGCTGGGGCATTAGTGCAC+TGG - chr8_3:58588051-58588070 Msa1297930:intron 55.0%
! TGCTGGGGCATTAGTGCACT+GGG - chr8_3:58588052-58588071 Msa1297930:intron 55.0%
CTCTGGGCCAGCTTGGATTA+TGG - chr8_3:58589539-58589558 Msa1297930:intron 55.0%
GGATGTGTCTTCTGCATCGG+AGG - chr8_3:58590687-58590706 Msa1297930:intron 55.0%
CTTAACCGCGTGCGAGCGTT+GGG + chr8_3:58583528-58583547 None:intergenic 60.0%
GCTCGCACGCGGTTAAGCAA+GGG - chr8_3:58583531-58583550 Msa1297930:three_prime_UTR 60.0%
ACGGCGAAAGTCGGAACCCT+AGG - chr8_3:58583782-58583801 Msa1297930:three_prime_UTR 60.0%
! TCGGCGCCGAAATCTCAACG+CGG - chr8_3:58583830-58583849 Msa1297930:three_prime_UTR 60.0%
AGTGGGGCAGCACCAGAAGA+TGG + chr8_3:58585648-58585667 None:intergenic 60.0%
! CTGATGGGCGTAGACTGCAG+AGG - chr8_3:58586832-58586851 Msa1297930:intron 60.0%
GAGTCACTAACAGGGACCCG+AGG - chr8_3:58587112-58587131 Msa1297930:intron 60.0%
! GGTCTTGTCGAGATCGCGCA+TGG - chr8_3:58587646-58587665 Msa1297930:intron 60.0%
CGGGAAAGGGTCCCACCATT+TGG + chr8_3:58588021-58588040 None:intergenic 60.0%
CATACGCAGGGTCCGGGAAA+GGG + chr8_3:58588034-58588053 None:intergenic 60.0%
!! TACCAAGCTCTGGGCCAGCT+TGG - chr8_3:58589532-58589551 Msa1297930:intron 60.0%
ATCCAAGCTGGCCCAGAGCT+TGG + chr8_3:58589537-58589556 None:intergenic 60.0%
!! CGCGTGCGAGCGTTGGGTTT+CGG + chr8_3:58583522-58583541 None:intergenic 65.0%
CGAAACCCAACGCTCGCACG+CGG - chr8_3:58583520-58583539 Msa1297930:three_prime_UTR 65.0%
GCTTAACCGCGTGCGAGCGT+TGG + chr8_3:58583529-58583548 None:intergenic 65.0%
CGCTCGCACGCGGTTAAGCA+AGG - chr8_3:58583530-58583549 Msa1297930:three_prime_UTR 65.0%
!! TTCGGCGCCGATGAAGCCAC+CGG + chr8_3:58583821-58583840 None:intergenic 65.0%
GCGGCTGCAATGAACCCCAG+TGG + chr8_3:58587322-58587341 None:intergenic 65.0%
CTGGGGTTCATTGCAGCCGC+TGG - chr8_3:58587322-58587341 Msa1297930:intron 65.0%
GGGTTCATTGCAGCCGCTGG+CGG - chr8_3:58587325-58587344 Msa1297930:intron 65.0%
TGTGGGTCAGGACCACGACC+CGG - chr8_3:58587749-58587768 Msa1297930:intron 65.0%
GCATACGCAGGGTCCGGGAA+AGG + chr8_3:58588035-58588054 None:intergenic 65.0%
TTCCCGGACCCTGCGTATGC+TGG - chr8_3:58588035-58588054 Msa1297930:intron 65.0%
TCCCGGACCCTGCGTATGCT+GGG - chr8_3:58588036-58588055 Msa1297930:intron 65.0%
AGGGACCCGAGGACGACCTC+TGG - chr8_3:58587123-58587142 Msa1297930:intron 70.0%
CCCCAGCATACGCAGGGTCC+GGG + chr8_3:58588040-58588059 None:intergenic 70.0%
CCCGGACCCTGCGTATGCTG+GGG - chr8_3:58588037-58588056 Msa1297930:intron 70.0%
GCCCCAGCATACGCAGGGTC+CGG + chr8_3:58588041-58588060 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 58583495 58591756 58583495 ID=Msa1297930;Name=Msa1297930
chr8_3 mRNA 58583495 58591756 58583495 ID=Msa1297930-mRNA-1;Parent=Msa1297930;Name=Msa1297930-mRNA-1;_AED=0.02;_eAED=0.02;_QI=260|1|1|1|0.75|1|5|535|359
chr8_3 exon 58583495 58584710 58583495 ID=Msa1297930-mRNA-1:exon:16830;Parent=Msa1297930-mRNA-1
chr8_3 exon 58584809 58584911 58584809 ID=Msa1297930-mRNA-1:exon:16829;Parent=Msa1297930-mRNA-1
chr8_3 exon 58589551 58589638 58589551 ID=Msa1297930-mRNA-1:exon:16828;Parent=Msa1297930-mRNA-1
chr8_3 exon 58591207 58591268 58591207 ID=Msa1297930-mRNA-1:exon:16827;Parent=Msa1297930-mRNA-1
chr8_3 exon 58591351 58591756 58591351 ID=Msa1297930-mRNA-1:exon:16826;Parent=Msa1297930-mRNA-1
chr8_3 five_prime_UTR 58591497 58591756 58591497 ID=Msa1297930-mRNA-1:five_prime_utr;Parent=Msa1297930-mRNA-1
chr8_3 CDS 58591351 58591496 58591351 ID=Msa1297930-mRNA-1:cds;Parent=Msa1297930-mRNA-1
chr8_3 CDS 58591207 58591268 58591207 ID=Msa1297930-mRNA-1:cds;Parent=Msa1297930-mRNA-1
chr8_3 CDS 58589551 58589638 58589551 ID=Msa1297930-mRNA-1:cds;Parent=Msa1297930-mRNA-1
chr8_3 CDS 58584809 58584911 58584809 ID=Msa1297930-mRNA-1:cds;Parent=Msa1297930-mRNA-1
chr8_3 CDS 58584030 58584710 58584030 ID=Msa1297930-mRNA-1:cds;Parent=Msa1297930-mRNA-1
chr8_3 three_prime_UTR 58583495 58584029 58583495 ID=Msa1297930-mRNA-1:three_prime_utr;Parent=Msa1297930-mRNA-1
Gene Sequence

>Msa1297930

ATGGCGACGGCACCGAGCAACAATTCAACGGCGAAAGTCGGAACCCTAGGTCTAACCAATTCACCGGTGGCTTCATCGGCGCCGAAATCTCAACGCGGTCAGAACAAACCTAAGTGCAAACAGTGTGGCAATGTTGCTCGTTCTAGGTGTCCTTATGAGCAATGCAAGAGTTGCTGTTCCAAGAATCAAAATCCTTGTCCGATTCATGTGTTAAAAGCCAGTACAATTCCTGACAACACTCCATCTTCTGGTGCTGCCCCACTTGATCGAAAATCCTTTGAACCACCCCCCTCAATAAGTGCTGGTAGAGCTGCGTCACTTCGACAACTTTCCAATAGTTTTGCTCAGTTCAATAATTTGCATCTTTCACTTCGATCAAAGAAGCCACTAACTAGAAAGGATGCTGCAGCTATCAATGAATGGAGGTTTTCCAAGTTAAAGGAATACAAGGAGCGAAATGTTGAAGCGGAAAATGAAGCCTTTGACCGATACATGCAAAATGTAGATTTGCTGGAAGAAGTATTATCTGTGAAGCATTCAGATGAGGATGTGTCTTCTGCATCGGAGGCTAATCCTACCTCAACAGAGAACAATGAGGTAATGATCCCTGGGTTAAAATTGCAACTAAGGTCAAACTCGACAAGAAGTGATGGTGTTAGAATAAGAATAAAAAAAACTGTAGATGATGGATTGAAGAAGCTCAAGTCTGCTGTAGATGGTGACAGCAATAATGAACAAATCGATGAAGTTAGTGAATCTTCGAATAAGAGAAAGAGGACCGAAAAGTTATCAGCTATAAGTGATCTTCTGGACAAAATTAACAAAGCCCGAAGTGAGGAGGATTTGCAGTCATGCTTGGAGGTGAAGTTACAGCTTTTCAATTCAGACGAAGACTCTGCTATGGTGCAACACACAGACAATGAAATGCATCAGAATCAAACTGCTGAAGGCGATGTTGTACCAACAAAAGAATTGGATTACTCGTTACCAAAATTGGTTGGGTCCTCTGAAATTGATCAAGAAACTCTCAACATCATTGACAAACACTTTTCTTCTCTCGAGAATGTAGAGCAGTTATGA
Protein sequence

>Msa1297930

MATAPSNNSTAKVGTLGLTNSPVASSAPKSQRGQNKPKCKQCGNVARSRCPYEQCKSCCSKNQNPCPIHVLKASTIPDNTPSSGAAPLDRKSFEPPPSISAGRAASLRQLSNSFAQFNNLHLSLRSKKPLTRKDAAAINEWRFSKLKEYKERNVEAENEAFDRYMQNVDLLEEVLSVKHSDEDVSSASEANPTSTENNEVMIPGLKLQLRSNSTRSDGVRIRIKKTVDDGLKKLKSAVDGDSNNEQIDEVSESSNKRKRTEKLSAISDLLDKINKARSEEDLQSCLEVKLQLFNSDEDSAMVQHTDNEMHQNQTAEGDVVPTKELDYSLPKLVGSSEIDQETLNIIDKHFSSLENVEQL*