AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1301370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1301370 MtrunA17_Chr3g0117091 89.873 79 8 0 1 79 1 79 1.77e-46 158
Msa1301370 MtrunA17_Chr1g0211161 81.928 83 15 0 3 85 4 86 6.95e-44 148
Msa1301370 MtrunA17_Chr4g0058631 77.647 85 19 0 1 85 1 85 6.17e-42 146
Msa1301370 MtrunA17_Chr1g0193371 74.118 85 22 0 1 85 1 85 3.16e-39 139
Msa1301370 MtrunA17_Chr7g0271241 74.118 85 22 0 1 85 1 85 1.79e-38 138
Msa1301370 MtrunA17_Chr7g0270891 70.588 85 25 0 1 85 1 85 5.95e-38 136
Msa1301370 MtrunA17_Chr8g0342511 66.667 93 28 1 1 93 1 90 1.62e-37 127
Msa1301370 MtrunA17_Chr1g0193801 69.412 85 26 0 1 85 1 85 1.73e-36 132
Msa1301370 MtrunA17_Chr8g0342541 70.588 85 25 0 1 85 1 85 3.53e-36 131
Msa1301370 MtrunA17_Chr2g0330041 70.588 85 25 0 1 85 1 85 4.11e-36 132
Msa1301370 MtrunA17_Chr8g0342521 69.412 85 26 0 1 85 1 85 1.53e-35 129
Msa1301370 MtrunA17_Chr8g0342531 68.235 85 27 0 1 85 1 85 2.41e-35 124
Msa1301370 MtrunA17_Chr8g0342461 55.046 109 48 1 1 108 1 109 4.66e-34 120
Msa1301370 MtrunA17_Chr8g0342471 48.344 151 63 4 1 146 1 141 6.71e-34 119
Msa1301370 MtrunA17_Chr8g0342481 68.605 86 26 1 1 85 1 86 8.16e-34 126
Msa1301370 MtrunA17_Chr5g0397231 57.647 85 36 0 1 85 1 85 3.94e-31 117
Msa1301370 MtrunA17_Chr8g0387421 57.647 85 36 0 1 85 1 85 1.34e-30 115
Msa1301370 MtrunA17_Chr2g0309911 62.353 85 31 1 1 85 1 84 3.05e-30 114
Msa1301370 MtrunA17_Chr4g0067291 80.328 61 12 0 77 137 298 358 1.92e-29 113
Msa1301370 MtrunA17_Chr4g0032401 63.291 79 29 0 7 85 12 90 8.72e-29 111
Msa1301370 MtrunA17_Chr3g0088461 60.465 86 33 1 1 85 10 95 1.77e-28 110
Msa1301370 MtrunA17_Chr2g0328771 64.865 74 26 0 12 85 20 93 3.27e-28 109
Msa1301370 MtrunA17_Chr1g0203441 67.532 77 25 0 9 85 10 86 5.86e-28 107
Msa1301370 MtrunA17_Chr3g0131121 57.647 85 36 0 1 85 1 85 1.10e-27 107
Msa1301370 MtrunA17_Chr5g0421601 41.317 167 56 5 77 239 56 184 4.06e-27 103
Msa1301370 MtrunA17_Chr8g0385321 62.025 79 30 0 1 79 1 79 5.71e-27 106
Msa1301370 MtrunA17_Chr3g0115821 55.294 85 38 0 1 85 1 85 9.32e-27 106
Msa1301370 MtrunA17_Chr6g0470971 63.636 77 28 0 9 85 11 87 3.40e-26 103
Msa1301370 MtrunA17_Chr4g0042611 54.118 85 39 0 1 85 1 85 1.28e-25 96.7
Msa1301370 MtrunA17_Chr5g0435101 51.807 83 40 0 3 85 2 84 1.92e-25 99.8
Msa1301370 MtrunA17_Chr4g0037141 54.118 85 39 0 1 85 1 85 2.06e-25 101
Msa1301370 MtrunA17_Chr6g0453471 55.294 85 38 0 1 85 1 85 1.18e-24 100
Msa1301370 MtrunA17_Chr2g0323351 53.012 83 39 0 9 91 9 91 2.46e-24 97.8
Msa1301370 MtrunA17_Chr4g0042671 55.294 85 38 0 1 85 1 85 3.11e-24 100
Msa1301370 MtrunA17_Chr4g0039971 51.765 85 41 0 1 85 2 86 5.80e-24 98.6
Msa1301370 MtrunA17_Chr7g0274581 51.765 85 41 0 1 85 1 85 1.09e-23 95.1
Msa1301370 MtrunA17_Chr7g0217741 56.962 79 34 0 1 79 1 79 1.09e-23 97.1
Msa1301370 MtrunA17_Chr2g0281071 54.651 86 38 1 1 85 1 86 1.37e-23 97.4
Msa1301370 MtrunA17_Chr1g0203411 50.588 85 42 0 1 85 1 85 2.33e-23 95.9
Msa1301370 MtrunA17_Chr2g0323411 54.118 85 39 0 1 85 1 85 3.33e-23 96.3
Msa1301370 MtrunA17_Chr3g0110351 56.962 79 34 0 1 79 1 79 6.40e-23 95.1
Msa1301370 MtrunA17_Chr5g0410961 50.588 85 42 0 1 85 1 85 7.00e-23 95.5
Msa1301370 MtrunA17_Chr1g0151941 48.837 86 43 1 1 85 1 86 7.32e-23 94.0
Msa1301370 MtrunA17_Chr3g0103281 51.190 84 41 0 1 84 1 84 1.18e-22 94.7
Msa1301370 MtrunA17_Chr4g0048511 53.488 86 39 1 1 85 1 86 1.18e-22 95.1
Msa1301370 MtrunA17_Chr7g0228891 58.228 79 33 0 1 79 1 79 1.65e-22 93.2
Msa1301370 MtrunA17_Chr5g0434571 56.962 79 34 0 1 79 37 115 1.77e-22 94.7
Msa1301370 MtrunA17_Chr5g0395281 54.054 74 34 0 12 85 12 85 2.58e-22 93.6
Msa1301370 MtrunA17_Chr4g0022931 51.351 74 36 0 6 79 7 80 2.91e-22 92.8
Msa1301370 MtrunA17_Chr4g0057031 53.165 79 37 0 1 79 1 79 3.22e-22 92.4
Msa1301370 MtrunA17_Chr2g0323321 55.882 68 30 0 12 79 11 78 3.47e-22 88.2
Msa1301370 MtrunA17_Chr4g0022901 51.351 74 36 0 6 79 7 80 4.00e-22 92.4
Msa1301370 MtrunA17_Chr4g0070641 48.235 85 44 0 1 85 1 85 7.27e-22 89.4
Msa1301370 MtrunA17_Chr1g0187761 52.941 85 40 0 1 85 1 85 7.75e-22 91.3
Msa1301370 MtrunA17_Chr5g0395221 50.649 77 38 0 9 85 9 85 8.10e-22 86.7
Msa1301370 MtrunA17_Chr6g0452271 47.059 85 45 0 1 85 1 85 8.57e-22 92.4
Msa1301370 MtrunA17_Chr2g0311221 51.190 84 41 0 2 85 4 87 9.05e-22 92.4
Msa1301370 MtrunA17_Chr4g0070611 48.235 85 44 0 1 85 1 85 9.54e-22 92.0
Msa1301370 MtrunA17_Chr2g0327351 53.488 86 38 2 1 84 1 86 1.10e-21 92.0
Msa1301370 MtrunA17_Chr7g0261281 49.412 85 43 0 1 85 1 85 1.50e-21 90.9
Msa1301370 MtrunA17_Chr1g0152011 53.165 79 36 1 1 78 1 79 3.16e-21 90.9
Msa1301370 MtrunA17_Chr1g0194951 56.962 79 34 0 1 79 1 79 3.66e-21 91.3
Msa1301370 MtrunA17_Chr4g0054391 53.165 79 36 1 1 78 1 79 4.09e-21 90.1
Msa1301370 MtrunA17_Chr4g0028311 52.326 86 39 2 1 84 1 86 6.02e-21 90.1
Msa1301370 MtrunA17_Chr4g0022911 50.000 74 37 0 6 79 7 80 7.46e-21 89.4
Msa1301370 MtrunA17_Chr4g0068061 51.765 85 41 0 1 85 1 85 8.09e-21 89.7
Msa1301370 MtrunA17_Chr2g0294811 50.588 85 42 0 1 85 1 85 1.28e-20 84.3
Msa1301370 MtrunA17_Chr4g0044421 47.500 80 42 0 6 85 6 85 1.33e-20 86.3
Msa1301370 MtrunA17_Chr7g0264641 53.165 79 36 1 1 78 1 79 1.34e-20 88.2
Msa1301370 MtrunA17_Chr1g0167661 50.588 85 42 0 1 85 1 85 1.41e-20 87.8
Msa1301370 MtrunA17_Chr1g0186061 52.113 71 34 0 9 79 17 87 2.69e-20 87.0
Msa1301370 MtrunA17_Chr5g0400821 51.899 79 37 1 1 78 1 79 2.74e-20 87.8
Msa1301370 MtrunA17_Chr3g0135311 50.633 79 38 1 1 78 1 79 3.90e-20 88.2
Msa1301370 MtrunA17_Chr1g0167691 49.412 85 43 0 1 85 1 85 4.12e-20 86.7
Msa1301370 MtrunA17_Chr8g0349261 52.874 87 39 2 1 85 1 87 4.15e-20 87.4
Msa1301370 MtrunA17_Chr1g0168661 50.000 76 38 0 4 79 13 88 1.20e-19 85.5
Msa1301370 MtrunA17_Chr7g0217221 35.971 139 80 2 1 139 1 130 1.20e-19 85.5
Msa1301370 MtrunA17_Chr8g0346561 48.235 85 44 0 1 85 1 85 1.79e-19 85.5
Msa1301370 MtrunA17_Chr6g0487491 51.899 79 37 1 1 78 1 79 2.02e-19 84.7
Msa1301370 MtrunA17_Chr4g0072751 49.367 79 39 1 1 78 1 79 2.42e-19 85.9
Msa1301370 MtrunA17_Chr4g0022881 49.296 71 36 0 9 79 9 79 2.74e-19 84.0
Msa1301370 MtrunA17_Chr5g0417821 51.351 74 36 0 12 85 7 80 3.37e-19 84.7
Msa1301370 MtrunA17_Chr7g0269831 60.294 68 27 0 1 68 1 68 1.15e-18 84.0
Msa1301370 MtrunA17_Chr7g0275911 47.059 85 45 0 1 85 1 85 1.63e-18 82.0
Msa1301370 MtrunA17_Chr4g0022891 47.887 71 37 0 9 79 9 79 2.49e-18 81.3
Msa1301370 MtrunA17_Chr4g0060721 50.633 79 39 0 1 79 2 80 5.52e-18 82.0
Msa1301370 MtrunA17_Chr3g0099141 47.887 71 37 0 9 79 37 107 6.65e-18 77.8
Msa1301370 MtrunA17_Chr7g0228231 48.148 81 40 1 1 79 1 81 8.11e-18 79.3
Msa1301370 MtrunA17_Chr3g0121241 48.750 80 41 0 6 85 36 115 1.10e-17 80.9
Msa1301370 MtrunA17_Chr6g0450101 46.914 81 41 1 1 79 1 81 1.78e-17 78.6
Msa1301370 MtrunA17_Chr6g0453211 49.367 79 40 0 1 79 1 79 1.87e-17 80.1
Msa1301370 MtrunA17_Chr1g0180391 51.471 68 33 0 12 79 19 86 2.64e-17 78.6
Msa1301370 MtrunA17_Chr7g0254411 49.367 79 40 0 1 79 1 79 3.02e-17 79.7
Msa1301370 MtrunA17_Chr4g0055981 42.857 77 44 0 9 85 52 128 4.50e-17 77.8
Msa1301370 MtrunA17_Chr5g0425591 48.571 70 36 0 13 82 10 79 5.00e-17 74.3
Msa1301370 MtrunA17_Chr5g0440781 50.000 70 35 0 13 82 13 82 7.41e-17 76.3
Msa1301370 MtrunA17_Chr1g0194291 52.941 68 32 0 12 79 21 88 7.77e-17 77.8
Msa1301370 MtrunA17_Chr3g0099131 49.275 69 35 0 11 79 40 108 7.83e-17 79.7
Msa1301370 MtrunA17_Chr3g0092401 49.367 79 40 0 1 79 2 80 1.29e-16 77.8
Msa1301370 MtrunA17_Chr5g0441141 50.000 70 35 0 13 82 13 82 1.43e-16 77.0
Msa1301370 MtrunA17_Chr5g0440761 50.000 70 35 0 13 82 13 82 1.47e-16 77.0
Msa1301370 MtrunA17_Chr1g0209661 49.296 71 36 0 9 79 24 94 1.48e-16 77.8
Msa1301370 MtrunA17_Chr3g0080861 49.254 67 34 0 12 78 37 103 1.92e-16 78.6
Msa1301370 MtrunA17_Chr1g0194301 48.529 68 35 0 12 79 33 100 2.87e-16 76.3
Msa1301370 MtrunA17_Chr8g0343831 43.421 76 43 0 10 85 6 81 4.03e-16 75.5
Msa1301370 MtrunA17_Chr8g0354661 49.254 67 34 0 12 78 37 103 4.64e-16 77.4
Msa1301370 MtrunA17_Chr6g0453751 50.000 74 29 1 12 77 20 93 1.12e-15 71.6
Msa1301370 MtrunA17_Chr1g0154031 47.059 68 36 0 12 79 76 143 2.18e-15 75.1
Msa1301370 MtrunA17_Chr7g0240821 33.051 118 68 1 17 123 6 123 3.51e-15 72.4
Msa1301370 MtrunA17_Chr4g0068921 50.000 60 30 0 12 71 24 83 1.39e-14 70.1
Msa1301370 MtrunA17_Chr8g0360111 45.946 74 40 0 12 85 25 98 1.46e-14 71.2
Msa1301370 MtrunA17_Chr2g0327821 41.667 72 42 0 8 79 2 73 2.13e-14 70.5
Msa1301370 MtrunA17_Chr1g0192411 42.857 77 44 0 11 87 11 87 2.46e-14 72.0
Msa1301370 MtrunA17_Chr2g0293911 52.632 57 27 0 12 68 24 80 2.98e-14 71.2
Msa1301370 MtrunA17_Chr5g0434831 48.649 74 38 0 12 85 7 80 3.88e-14 68.9
Msa1301370 MtrunA17_Chr2g0322521 51.667 60 29 0 12 71 29 88 1.13e-13 70.1
Msa1301370 MtrunA17_Chr5g0434931 40.476 84 50 0 2 85 25 108 1.96e-13 68.6
Msa1301370 MtrunA17_Chr7g0220341 44.737 76 40 1 12 85 25 100 4.42e-13 67.4
Msa1301370 MtrunA17_Chr5g0434911 44.595 74 41 0 12 85 21 94 1.39e-12 65.9
Msa1301370 MtrunA17_Chr1g0193901 50.000 60 29 1 10 68 9 68 1.46e-12 62.8
Msa1301370 MtrunA17_Chr1g0193891 50.000 60 29 1 10 68 9 68 1.46e-12 62.8
Msa1301370 MtrunA17_Chr1g0193871 50.000 60 29 1 10 68 9 68 1.46e-12 62.8
Msa1301370 MtrunA17_Chr1g0193881 50.000 60 29 1 10 68 9 68 1.46e-12 62.8
Msa1301370 MtrunA17_Chr5g0434841 45.946 74 40 0 12 85 20 93 1.88e-12 65.9
Msa1301370 MtrunA17_Chr7g0228991 44.595 74 41 0 12 85 29 102 2.01e-12 65.5
Msa1301370 MtrunA17_Chr4g0030881 41.892 74 36 1 13 79 8 81 2.41e-12 65.1
Msa1301370 MtrunA17_Chr8g0334881 38.961 77 46 1 4 79 2 78 3.30e-12 65.1
Msa1301370 MtrunA17_Chr4g0013361 43.478 69 38 1 12 79 10 78 1.12e-11 63.5
Msa1301370 MtrunA17_Chr5g0441131 43.939 66 37 0 13 78 10 75 1.16e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1301370 AT5G26660.1 77.215 79 18 0 1 79 1 79 7.86e-38 136
Msa1301370 AT4G01680.3 70.588 85 25 0 1 85 1 85 2.78e-37 131
Msa1301370 AT1G57560.1 70.588 85 25 0 1 85 1 85 6.26e-37 132
Msa1301370 AT1G57560.2 70.588 85 25 0 1 85 1 85 8.17e-37 131
Msa1301370 AT4G01680.1 70.588 85 25 0 1 85 1 85 1.22e-36 132
Msa1301370 AT1G09540.1 70.588 85 25 0 1 85 1 85 4.19e-36 132
Msa1301370 AT3G13890.2 68.235 85 27 0 1 85 1 85 6.42e-35 128
Msa1301370 AT4G01680.2 61.856 97 25 1 1 85 1 97 4.04e-33 123
Msa1301370 AT3G13890.1 61.702 94 27 1 1 85 1 94 6.67e-32 120
Msa1301370 AT1G63910.1 58.824 85 35 0 1 85 1 85 8.04e-31 117
Msa1301370 AT3G12720.1 62.195 82 31 0 4 85 14 95 3.11e-30 115
Msa1301370 AT5G12870.1 63.158 76 28 0 10 85 16 91 5.53e-27 105
Msa1301370 AT1G34670.1 55.294 85 38 0 1 85 1 85 6.01e-26 104
Msa1301370 AT5G56110.1 41.463 123 61 1 1 112 1 123 6.14e-26 103
Msa1301370 AT5G65230.1 52.747 91 43 0 1 91 1 91 6.28e-26 103
Msa1301370 AT5G10280.1 54.118 85 39 0 1 85 1 85 9.46e-26 103
Msa1301370 AT4G05100.1 54.651 86 38 1 1 85 1 86 2.01e-25 102
Msa1301370 AT3G08500.1 58.140 86 33 1 3 85 18 103 2.45e-25 102
Msa1301370 AT4G38620.1 55.294 85 38 0 1 85 1 85 2.72e-25 101
Msa1301370 AT2G16720.1 54.118 85 39 0 1 85 1 85 2.91e-25 100
Msa1301370 AT4G34990.1 55.294 85 38 0 1 85 1 85 3.30e-25 100
Msa1301370 AT3G48920.1 55.844 77 34 0 9 85 15 91 3.33e-25 100
Msa1301370 AT3G02940.2 51.765 85 41 0 1 85 1 85 3.40e-25 101
Msa1301370 AT4G09460.1 54.118 85 39 0 1 85 1 85 3.66e-25 100
Msa1301370 AT1G22640.1 52.941 85 40 0 1 85 1 85 4.00e-25 100
Msa1301370 AT3G01140.2 55.294 85 38 0 1 85 1 85 4.46e-25 102
Msa1301370 AT3G02940.1 51.765 85 41 0 1 85 1 85 5.45e-25 101
Msa1301370 AT3G02940.3 51.765 85 41 0 1 85 1 85 5.45e-25 101
Msa1301370 AT4G28110.1 50.588 85 42 0 1 85 1 85 3.03e-24 98.6
Msa1301370 AT5G15310.1 54.118 85 39 0 1 85 1 85 4.03e-24 99.0
Msa1301370 AT5G15310.2 54.118 85 39 0 1 85 1 85 4.28e-24 99.0
Msa1301370 AT5G15310.4 54.118 85 39 0 1 85 1 85 4.71e-24 97.4
Msa1301370 AT5G16770.4 49.412 85 43 0 1 85 1 85 7.10e-24 98.2
Msa1301370 AT5G16770.3 49.412 85 43 0 1 85 1 85 7.10e-24 98.2
Msa1301370 AT5G16770.1 49.412 85 43 0 1 85 1 85 8.89e-24 98.2
Msa1301370 AT5G16770.2 49.412 85 43 0 1 85 1 85 8.89e-24 98.2
Msa1301370 AT3G28470.1 54.430 79 36 0 1 79 1 79 1.09e-23 97.8
Msa1301370 AT4G21440.1 52.941 85 40 0 1 85 1 85 1.22e-23 98.2
Msa1301370 AT5G54230.1 52.941 85 40 0 1 85 1 85 1.24e-23 97.8
Msa1301370 AT4G25560.1 57.895 76 32 0 10 85 8 83 2.26e-23 96.3
Msa1301370 AT2G31180.1 54.430 79 36 0 1 79 1 79 2.58e-23 95.5
Msa1301370 AT3G01140.1 55.000 80 36 0 6 85 49 128 4.53e-23 97.1
Msa1301370 AT1G35515.1 51.190 84 41 0 1 84 1 84 5.27e-23 93.6
Msa1301370 AT5G52260.1 61.039 77 30 0 9 85 9 85 6.99e-23 94.7
Msa1301370 AT1G56160.1 53.571 84 39 0 2 85 4 87 8.38e-23 95.1
Msa1301370 AT1G06180.1 54.118 85 39 0 1 85 1 85 1.06e-22 93.6
Msa1301370 AT5G07690.1 50.000 80 40 0 1 80 1 80 1.38e-22 95.1
Msa1301370 AT4G17785.2 53.488 86 39 1 1 85 1 86 1.47e-22 95.1
Msa1301370 AT3G61250.1 52.941 85 40 0 1 85 1 85 1.49e-22 94.4
Msa1301370 AT4G17785.1 53.488 86 39 1 1 85 1 86 1.50e-22 95.1
Msa1301370 AT4G12350.1 51.765 85 41 0 1 85 1 85 1.69e-22 94.0
Msa1301370 AT4G22680.1 54.430 79 36 0 1 79 1 79 1.72e-22 93.6
Msa1301370 AT1G74430.1 52.941 85 40 0 1 85 1 85 1.73e-22 93.6
Msa1301370 AT1G79180.1 56.410 78 34 0 2 79 4 81 2.19e-22 94.0
Msa1301370 AT5G61420.2 47.561 82 43 0 1 82 1 82 2.72e-22 94.7
Msa1301370 AT5G60890.1 50.633 79 39 0 1 79 1 79 2.99e-22 93.6
Msa1301370 AT1G66230.1 55.696 79 35 0 1 79 1 79 6.31e-22 92.4
Msa1301370 AT5G14340.1 54.118 85 39 0 1 85 13 97 9.21e-22 91.7
Msa1301370 AT1G18570.1 51.351 74 36 0 6 79 7 80 1.39e-21 92.4
Msa1301370 AT3G23250.1 49.412 85 43 0 1 85 1 85 1.60e-21 91.3
Msa1301370 AT5G07700.1 48.750 80 40 1 3 82 4 82 2.58e-21 91.7
Msa1301370 AT5G07700.2 48.750 80 40 1 3 82 4 82 2.58e-21 91.7
Msa1301370 AT5G16600.1 51.111 90 41 1 1 90 1 87 2.82e-21 91.3
Msa1301370 AT5G23000.1 54.430 79 35 1 1 78 1 79 2.86e-21 91.3
Msa1301370 AT5G57620.1 51.807 83 39 1 1 82 1 83 3.38e-21 91.3
Msa1301370 AT3G62610.1 50.588 85 42 0 1 85 1 85 3.65e-21 91.3
Msa1301370 AT2G47460.1 49.412 85 43 0 1 85 1 85 7.29e-21 90.9
Msa1301370 AT1G74080.1 48.810 84 43 0 1 84 1 84 1.01e-20 89.7
Msa1301370 AT5G65790.1 51.899 79 37 1 1 78 1 79 1.81e-20 89.7
Msa1301370 AT3G49690.1 51.899 79 37 1 1 78 1 79 1.99e-20 88.6
Msa1301370 AT5G49330.1 51.765 85 41 0 1 85 1 85 2.10e-20 89.0
Msa1301370 AT2G36890.1 45.055 91 46 2 1 90 1 88 3.47e-20 87.8
Msa1301370 AT2G36890.2 45.055 91 46 2 1 90 42 129 4.35e-20 88.2
Msa1301370 AT1G16490.1 53.846 78 36 0 2 79 4 81 8.99e-20 86.3
Msa1301370 AT1G18710.1 51.351 74 36 0 12 85 12 85 2.08e-19 85.1
Msa1301370 AT3G12820.1 53.247 77 36 0 3 79 5 81 2.46e-19 84.3
Msa1301370 AT3G24310.1 51.389 72 35 0 8 79 14 85 3.39e-19 84.7
Msa1301370 AT5G35550.1 46.753 77 41 0 9 85 11 87 4.28e-19 84.3
Msa1301370 AT5G62320.1 49.412 85 36 1 2 79 3 87 4.69e-19 84.0
Msa1301370 AT4G13480.1 52.778 72 34 0 8 79 2 73 5.73e-19 84.0
Msa1301370 AT3G47600.1 51.899 79 38 0 1 79 1 79 1.05e-18 84.3
Msa1301370 AT5G14750.1 46.575 73 39 0 13 85 17 89 2.81e-18 80.9
Msa1301370 AT5G62470.2 35.971 139 77 2 1 135 1 131 2.90e-18 83.2
Msa1301370 AT1G48000.1 52.174 69 33 0 11 79 31 99 4.32e-18 81.3
Msa1301370 AT4G37780.1 49.367 79 39 1 1 78 1 79 4.87e-18 82.0
Msa1301370 AT3G01530.1 52.941 68 32 0 12 79 25 92 5.30e-18 80.1
Msa1301370 AT3G30210.1 53.333 75 31 1 13 83 28 102 7.70e-18 81.3
Msa1301370 AT1G74650.1 50.633 79 39 0 1 79 1 79 8.69e-18 81.6
Msa1301370 AT3G27810.1 49.296 71 36 0 9 79 17 87 8.70e-18 80.1
Msa1301370 AT5G40330.1 42.857 77 44 0 9 85 9 85 1.25e-17 79.3
Msa1301370 AT5G40350.1 50.725 69 34 0 11 79 16 84 1.59e-17 79.0
Msa1301370 AT3G13540.1 47.500 80 42 0 6 85 17 96 2.51e-17 79.3
Msa1301370 AT5G52600.1 44.156 77 43 0 9 85 9 85 2.87e-17 78.2
Msa1301370 AT1G08810.1 40.984 122 61 3 1 111 1 122 3.85e-17 79.3
Msa1301370 AT3G27920.1 41.558 77 45 0 9 85 11 87 4.99e-17 78.2
Msa1301370 AT5G62470.1 35.971 139 76 3 1 135 1 130 1.41e-16 78.6
Msa1301370 AT2G26960.1 49.333 75 37 1 7 80 15 89 2.21e-16 78.6
Msa1301370 AT1G68320.1 51.429 70 34 0 10 79 17 86 2.28e-16 77.0
Msa1301370 AT1G79180.2 38.739 111 35 1 2 79 4 114 3.11e-16 77.4
Msa1301370 AT5G06100.1 48.529 68 35 0 12 79 32 99 8.16e-16 76.6
Msa1301370 AT3G06490.1 57.895 57 24 0 12 68 19 75 1.06e-15 75.9
Msa1301370 AT5G06100.5 48.529 68 35 0 12 79 32 99 1.13e-15 76.6
Msa1301370 AT5G06100.2 48.529 68 35 0 12 79 32 99 1.13e-15 76.6
Msa1301370 AT5G06100.3 48.529 68 35 0 12 79 32 99 1.13e-15 76.6
Msa1301370 AT5G06100.4 48.529 68 35 0 12 79 32 99 1.13e-15 76.6
Msa1301370 AT3G28910.1 48.101 79 41 0 1 79 1 79 1.52e-15 75.1
Msa1301370 AT1G25340.1 52.239 67 32 0 13 79 19 85 1.99e-15 74.3
Msa1301370 AT1G66380.2 53.968 63 29 0 12 74 8 70 2.76e-15 70.5
Msa1301370 AT3G11440.3 47.059 68 36 0 12 79 41 108 2.82e-15 75.5
Msa1301370 AT3G11440.4 47.059 68 36 0 12 79 41 108 2.82e-15 75.5
Msa1301370 AT3G11440.1 47.059 68 36 0 12 79 41 108 2.82e-15 75.5
Msa1301370 AT3G11440.2 47.059 68 36 0 12 79 41 108 2.85e-15 75.1
Msa1301370 AT5G55020.1 48.529 68 35 0 12 79 26 93 3.01e-15 75.1
Msa1301370 AT2G47190.1 43.421 76 39 1 12 83 20 95 3.93e-15 73.6
Msa1301370 AT4G26930.1 44.595 74 41 0 12 85 19 92 4.41e-15 74.3
Msa1301370 AT1G66380.1 53.968 63 29 0 12 74 8 70 9.12e-15 69.7
Msa1301370 AT2G32460.1 47.059 68 36 0 12 79 18 85 1.37e-14 73.2
Msa1301370 AT2G32460.2 47.059 68 36 0 12 79 6 73 1.48e-14 73.2
Msa1301370 AT3G53200.1 44.304 79 40 1 9 83 6 84 1.68e-14 71.2
Msa1301370 AT5G59780.3 44.444 72 40 0 8 79 4 75 1.93e-14 70.9
Msa1301370 AT1G56650.1 52.381 63 30 0 12 74 8 70 7.58e-14 69.7
Msa1301370 AT3G60460.1 41.026 78 45 1 3 79 2 79 1.15e-13 69.7
Msa1301370 AT5G49620.1 43.662 71 38 1 3 71 15 85 1.19e-13 69.7
Msa1301370 AT5G49620.2 50.000 60 30 0 12 71 26 85 1.34e-13 69.7
Msa1301370 AT3G46130.1 46.269 67 36 0 13 79 10 76 1.79e-13 68.6
Msa1301370 AT1G66390.1 52.381 63 30 0 12 74 8 70 3.80e-13 67.8
Msa1301370 AT1G66370.1 44.595 74 41 0 12 85 8 81 2.62e-12 65.1
Msa1301370 AT2G26950.1 32.941 85 57 0 1 85 5 89 4.09e-12 65.9
Msa1301370 AT5G26660.2 77.143 35 8 0 45 79 14 48 4.27e-12 65.5
Msa1301370 AT1G25340.2 47.761 67 30 1 13 79 19 80 8.77e-11 61.2

Find 60 sgRNAs with CRISPR-Local

Find 158 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATAGTAAAGGTCTTAATT+AGG 0.230023 8_3:+63407678 Msa1301370:CDS
CTTGCAGATGACCATTGTTT+TGG 0.238609 8_3:+63407593 Msa1301370:CDS
GAGTTCTTCGGTGATGAAAA+TGG 0.262327 8_3:+63406932 Msa1301370:CDS
AAGACAAGATTTATGTTTGA+TGG 0.285872 8_3:+63407646 Msa1301370:CDS
TTCAATTACATAACGATGTT+TGG 0.314366 8_3:+63405188 Msa1301370:CDS
CATAGTAAAGGTCTTAATTA+GGG 0.322411 8_3:+63407679 Msa1301370:CDS
GGAAACCTCCCATCATTCTA+TGG 0.322905 8_3:-63407781 None:intergenic
TTAATATTACCAGCTAGTTT+AGG 0.344561 8_3:-63405233 None:intergenic
GGGGAAGTTGAATCTTTCTC+TGG 0.358066 8_3:+63407699 Msa1301370:exon
TTGATTCCCTTTGAGTTCTT+CGG 0.364077 8_3:+63406920 Msa1301370:CDS
AACATTCCTCTCTTCAAATC+AGG 0.399385 8_3:-63405433 None:intergenic
TTTGCTTTAAAGAACAGAAA+TGG 0.411738 8_3:-63405121 None:intergenic
TACCTGCAGCTGCATTGTAT+TGG 0.414305 8_3:-63407749 None:intergenic
AGAAACATGTTATCCTCCTT+TGG 0.416553 8_3:+63406769 Msa1301370:intron
GGTGTAGATTGAAACTGATA+AGG 0.423427 8_3:-63406896 None:intergenic
TAAGATGGATAAACTATTTG+AGG 0.436802 8_3:+63405410 Msa1301370:CDS
GAAATGTAACCATAGAATGA+TGG 0.467705 8_3:+63407772 Msa1301370:three_prime_UTR
GACAAGATTGCGGTATTTGA+AGG 0.475325 8_3:-63407330 None:intergenic
TGTTCAGTTCCTAAACTAGC+TGG 0.486303 8_3:+63405224 Msa1301370:CDS
TACATAACGATGTTTGGTGT+TGG 0.488740 8_3:+63405194 Msa1301370:CDS
TTCGGTGATGAAAATGGAAA+CGG 0.498167 8_3:+63406938 Msa1301370:CDS
TCATCACCGAAGAACTCAAA+GGG 0.500565 8_3:-63406926 None:intergenic
GAAAGAGTTGTATATTAAGA+TGG 0.503727 8_3:+63405395 Msa1301370:CDS
GGCCACTGTAATAATGTTCA+AGG 0.508867 8_3:+63407392 Msa1301370:CDS
AATCAATCAAAGAACACTAA+AGG 0.511452 8_3:-63407016 None:intergenic
TCGGTGATGAAAATGGAAAC+GGG 0.515045 8_3:+63406939 Msa1301370:CDS
CTTCTTGAGCACATATCCTC+AGG 0.515556 8_3:-63407626 None:intergenic
TACCAATACAATGCAGCTGC+AGG 0.526538 8_3:+63407747 Msa1301370:three_prime_UTR
TTGAGGCCTGATTTGAAGAG+AGG 0.529236 8_3:+63405427 Msa1301370:CDS
CCATTACCCTACATGTGTGC+AGG 0.530317 8_3:+63406860 Msa1301370:CDS
ACATATCCTCAGGAGATTCA+AGG 0.531130 8_3:-63407616 None:intergenic
GGGAAGTTGAATCTTTCTCT+GGG 0.534055 8_3:+63407700 Msa1301370:exon
CCTGCACACATGTAGGGTAA+TGG 0.537176 8_3:-63406860 None:intergenic
AAATGTAACCATAGAATGAT+GGG 0.537432 8_3:+63407773 Msa1301370:three_prime_UTR
GTGTAGATTGAAACTGATAA+GGG 0.544319 8_3:-63406895 None:intergenic
TATGTATTGCAGGGTTGCAA+AGG 0.544814 8_3:+63405368 Msa1301370:intron
AACAATGGTCATCTGCAAGA+AGG 0.545983 8_3:-63407589 None:intergenic
ATTATGTCCCATGGGAACAA+TGG 0.554058 8_3:+63406814 Msa1301370:CDS
TAAGTTACATATTGTACCAA+AGG 0.558078 8_3:-63406785 None:intergenic
AGGACAATCCATTGTTCCCA+TGG 0.561451 8_3:-63406822 None:intergenic
ATCAAAGCCTGCACACATGT+AGG 0.564828 8_3:-63406867 None:intergenic
ATATATGTTGAAATTGCAGA+TGG 0.567685 8_3:+63407559 Msa1301370:CDS
TTCATCACCGAAGAACTCAA+AGG 0.574097 8_3:-63406927 None:intergenic
AAGAACTCAAAGGGAATCAA+AGG 0.577254 8_3:-63406917 None:intergenic
TCAAAGCCTGCACACATGTA+GGG 0.590851 8_3:-63406866 None:intergenic
TTATGCTTGCAGGATTCGGA+TGG 0.592514 8_3:+63407501 Msa1301370:intron
AATGGCGGAACATAATAAGA+AGG 0.606023 8_3:-63406842 None:intergenic
TACAACAGATTATGTCCCAT+GGG 0.611088 8_3:+63406806 Msa1301370:intron
AGGAATGTTCTCAAAACAAG+AGG 0.619853 8_3:+63405447 Msa1301370:CDS
TTACAACAGATTATGTCCCA+TGG 0.627593 8_3:+63406805 Msa1301370:intron
GAGATTCAAGGCCAAAACAA+TGG 0.633422 8_3:-63407604 None:intergenic
TACCTTGAACATTATTACAG+TGG 0.634365 8_3:-63407394 None:intergenic
GGACAATCCATTGTTCCCAT+GGG 0.638377 8_3:-63406821 None:intergenic
TATGTTGAAATTGCAGATGG+CGG 0.642668 8_3:+63407562 Msa1301370:CDS
ATAGTAAAGGTCTTAATTAG+GGG 0.647173 8_3:+63407680 Msa1301370:CDS
GTTACATATTGTACCAAAGG+AGG 0.654447 8_3:-63406782 None:intergenic
ATTGCAGGGTTGCAAAGGTG+TGG 0.661088 8_3:+63405373 Msa1301370:intron
GCACACATGTAGGGTAATGG+CGG 0.679759 8_3:-63406857 None:intergenic
TGTAACCATAGAATGATGGG+AGG 0.707909 8_3:+63407776 Msa1301370:three_prime_UTR
GTATATAGGAGACAAGATTG+CGG 0.736798 8_3:-63407340 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCATTAGTAAATAAAAA+TGG + chr8_3:63406125-63406144 Msa1301370:intron 10.0%
!! TTGTAAAGTAAAAAAAGATA+AGG - chr8_3:63405308-63405327 None:intergenic 15.0%
!! TAACATGATTATAATATTTC+AGG + chr8_3:63407298-63407317 Msa1301370:intron 15.0%
!! TTAAAGCAAAAACTAAGAAA+AGG + chr8_3:63405134-63405153 Msa1301370:CDS 20.0%
!! AAAAACTAAGAAAAGGTTTA+TGG + chr8_3:63405141-63405160 Msa1301370:CDS 20.0%
!!! TTAATGAGATAAAACACTTT+TGG + chr8_3:63405582-63405601 Msa1301370:intron 20.0%
!! CAATAATGAATCTCTAATAA+AGG + chr8_3:63405670-63405689 Msa1301370:intron 20.0%
!! TTCTTTAAATTTATGCTTTC+AGG + chr8_3:63406153-63406172 Msa1301370:intron 20.0%
!!! CTTAAAGATACATTTTATGA+TGG + chr8_3:63406306-63406325 Msa1301370:intron 20.0%
!! AACAAAATTCTAACTTCATA+GGG - chr8_3:63406595-63406614 None:intergenic 20.0%
!! CCAATGAAATAAATAAAGAA+TGG - chr8_3:63406650-63406669 None:intergenic 20.0%
!!! CCATTCTTTATTTATTTCAT+TGG + chr8_3:63406647-63406666 Msa1301370:intron 20.0%
!! CGTGAATATATTGTTAATTA+TGG + chr8_3:63406728-63406747 Msa1301370:intron 20.0%
!! TTCAATGGAAAAATAAAACA+AGG + chr8_3:63407209-63407228 Msa1301370:intron 20.0%
!! GTAAAAATGACATAGTATAT+AGG - chr8_3:63407357-63407376 None:intergenic 20.0%
!! AATGTAAAGTTGAAAAACTT+TGG - chr8_3:63407527-63407546 None:intergenic 20.0%
!!! TTTGCTTTAAAGAACAGAAA+TGG - chr8_3:63405124-63405143 None:intergenic 25.0%
! TTCAATTACATAACGATGTT+TGG + chr8_3:63405188-63405207 Msa1301370:CDS 25.0%
!! TTAATATTACCAGCTAGTTT+AGG - chr8_3:63405236-63405255 None:intergenic 25.0%
!!! TCACTTTTTTATGTATTGCA+GGG + chr8_3:63405359-63405378 Msa1301370:intron 25.0%
! GAAAGAGTTGTATATTAAGA+TGG + chr8_3:63405395-63405414 Msa1301370:CDS 25.0%
! TAAGATGGATAAACTATTTG+AGG + chr8_3:63405410-63405429 Msa1301370:CDS 25.0%
! TTAAATGTTCAAGCATGTTA+TGG + chr8_3:63405548-63405567 Msa1301370:intron 25.0%
! AAGAAGAAACTAATGAAACA+AGG + chr8_3:63405617-63405636 Msa1301370:intron 25.0%
! AGAAGAAACTAATGAAACAA+GGG + chr8_3:63405618-63405637 Msa1301370:intron 25.0%
! AGAGATTCATTATTGATGAA+GGG - chr8_3:63405665-63405684 None:intergenic 25.0%
! TAGAGATTCATTATTGATGA+AGG - chr8_3:63405666-63405685 None:intergenic 25.0%
! CTATGTATGTAGTGAATAAA+TGG + chr8_3:63405931-63405950 Msa1301370:intron 25.0%
! AATGCAATACATTACATACA+TGG - chr8_3:63406469-63406488 None:intergenic 25.0%
! CAACAAAATTCTAACTTCAT+AGG - chr8_3:63406596-63406615 None:intergenic 25.0%
! TAAGTTACATATTGTACCAA+AGG - chr8_3:63406788-63406807 None:intergenic 25.0%
! TGAAAAAACAACGAAAGAAA+AGG - chr8_3:63406985-63407004 None:intergenic 25.0%
! AATCAATCAAAGAACACTAA+AGG - chr8_3:63407019-63407038 None:intergenic 25.0%
! CATTAATGTTGCTAGATTAA+TGG + chr8_3:63407098-63407117 Msa1301370:intron 25.0%
!! TTTTCCATTGAATACGATTA+AGG - chr8_3:63407201-63407220 None:intergenic 25.0%
! TTAGTGAAGCATAATTGATT+TGG - chr8_3:63407281-63407300 None:intergenic 25.0%
!! TTTTACAACACTTGCAATAT+TGG + chr8_3:63407371-63407390 Msa1301370:CDS 25.0%
! CATAAATTGCAAAAACTTGT+AGG - chr8_3:63407423-63407442 None:intergenic 25.0%
!! CAAGTTTTTGCAATTTATGT+CGG + chr8_3:63407424-63407443 Msa1301370:intron 25.0%
! ATATATGTTGAAATTGCAGA+TGG + chr8_3:63407559-63407578 Msa1301370:CDS 25.0%
! AAGACAAGATTTATGTTTGA+TGG + chr8_3:63407646-63407665 Msa1301370:CDS 25.0%
!!! GGTTTTATATGACATAGTAA+AGG + chr8_3:63407667-63407686 Msa1301370:CDS 25.0%
! ACATAGTAAAGGTCTTAATT+AGG + chr8_3:63407678-63407697 Msa1301370:CDS 25.0%
! CATAGTAAAGGTCTTAATTA+GGG + chr8_3:63407679-63407698 Msa1301370:CDS 25.0%
! ATAGTAAAGGTCTTAATTAG+GGG + chr8_3:63407680-63407699 Msa1301370:CDS 25.0%
! AAATGTAACCATAGAATGAT+GGG + chr8_3:63407773-63407792 Msa1301370:three_prime_UTR 25.0%
!! AAAGCTTCTCATCTTTTTCA+GGG - chr8_3:63405169-63405188 None:intergenic 30.0%
! AAAAGCTTCTCATCTTTTTC+AGG - chr8_3:63405170-63405189 None:intergenic 30.0%
!!! CTCACTTTTTTATGTATTGC+AGG + chr8_3:63405358-63405377 Msa1301370:intron 30.0%
ATCTCTAATAAAGGAAGAGA+AGG + chr8_3:63405679-63405698 Msa1301370:intron 30.0%
AATATGAGAATGAGTCTTAG+AGG + chr8_3:63405857-63405876 Msa1301370:intron 30.0%
ATATGAGAATGAGTCTTAGA+GGG + chr8_3:63405858-63405877 Msa1301370:intron 30.0%
!! TTTTGATTATGTGTGAACCT+GGG + chr8_3:63405978-63405997 Msa1301370:intron 30.0%
AATGCAAAAAACAAAGTGGT+TGG + chr8_3:63406020-63406039 Msa1301370:intron 30.0%
AACCTTTGTGAATATCATGA+AGG - chr8_3:63406107-63406126 None:intergenic 30.0%
!! CTGGAGTACTTTAACTTTTT+AGG + chr8_3:63406218-63406237 Msa1301370:intron 30.0%
!! AACTTTTTAGGCATGTGATT+AGG + chr8_3:63406230-63406249 Msa1301370:intron 30.0%
!! TTGACGGTTTGTTCAAATTT+TGG - chr8_3:63406409-63406428 None:intergenic 30.0%
GTGTAGATTGAAACTGATAA+GGG - chr8_3:63406898-63406917 None:intergenic 30.0%
!! TGAGTGATTTGTTGTATTCT+GGG + chr8_3:63407144-63407163 Msa1301370:intron 30.0%
! TTAAGGCGTCAATATGAAAA+GGG - chr8_3:63407184-63407203 None:intergenic 30.0%
! ATTAAGGCGTCAATATGAAA+AGG - chr8_3:63407185-63407204 None:intergenic 30.0%
TACCTTGAACATTATTACAG+TGG - chr8_3:63407397-63407416 None:intergenic 30.0%
AAATTGCAAAAACTTGTAGG+CGG - chr8_3:63407420-63407439 None:intergenic 30.0%
ACATTTCAAATTATGCTTGC+AGG + chr8_3:63407491-63407510 Msa1301370:intron 30.0%
GAAATGTAACCATAGAATGA+TGG + chr8_3:63407772-63407791 Msa1301370:three_prime_UTR 30.0%
!!! AAGCTTCTCATCTTTTTCAG+GGG - chr8_3:63405168-63405187 None:intergenic 35.0%
!! TACATAACGATGTTTGGTGT+TGG + chr8_3:63405194-63405213 Msa1301370:CDS 35.0%
AACATTCCTCTCTTCAAATC+AGG - chr8_3:63405436-63405455 None:intergenic 35.0%
AGGAATGTTCTCAAAACAAG+AGG + chr8_3:63405447-63405466 Msa1301370:CDS 35.0%
! TTCATGAAGCACTTGCAAAT+AGG + chr8_3:63405489-63405508 Msa1301370:intron 35.0%
AAGGAAGAGAAGGAAAATTC+AGG + chr8_3:63405689-63405708 Msa1301370:intron 35.0%
GTTTACCTTAGATAAATCCC+AGG + chr8_3:63405730-63405749 Msa1301370:intron 35.0%
AGAAACCTGGGATTTATCTA+AGG - chr8_3:63405738-63405757 None:intergenic 35.0%
!!! GTTTTGATTATGTGTGAACC+TGG + chr8_3:63405977-63405996 Msa1301370:intron 35.0%
GGACAATGCAAAAAACAAAG+TGG + chr8_3:63406016-63406035 Msa1301370:intron 35.0%
TGCCTTCATGATATTCACAA+AGG + chr8_3:63406102-63406121 Msa1301370:intron 35.0%
TATGCTTTCAGGACTTCATA+AGG + chr8_3:63406164-63406183 Msa1301370:intron 35.0%
! GACTTCATAAGGTTTTCCTA+TGG + chr8_3:63406175-63406194 Msa1301370:intron 35.0%
! AGTTAAAGTACTCCAGTCAA+AGG - chr8_3:63406214-63406233 None:intergenic 35.0%
! TTTGAAGCAGATAGGATTGA+TGG + chr8_3:63406545-63406564 Msa1301370:intron 35.0%
TTGAAGCAGATAGGATTGAT+GGG + chr8_3:63406546-63406565 Msa1301370:intron 35.0%
AGAAACATGTTATCCTCCTT+TGG + chr8_3:63406769-63406788 Msa1301370:intron 35.0%
GTTACATATTGTACCAAAGG+AGG - chr8_3:63406785-63406804 None:intergenic 35.0%
TTACAACAGATTATGTCCCA+TGG + chr8_3:63406805-63406824 Msa1301370:intron 35.0%
TACAACAGATTATGTCCCAT+GGG + chr8_3:63406806-63406825 Msa1301370:intron 35.0%
! AATGGCGGAACATAATAAGA+AGG - chr8_3:63406845-63406864 None:intergenic 35.0%
GGTGTAGATTGAAACTGATA+AGG - chr8_3:63406899-63406918 None:intergenic 35.0%
AAGAACTCAAAGGGAATCAA+AGG - chr8_3:63406920-63406939 None:intergenic 35.0%
! TTGATTCCCTTTGAGTTCTT+CGG + chr8_3:63406920-63406939 Msa1301370:CDS 35.0%
TTCGGTGATGAAAATGGAAA+CGG + chr8_3:63406938-63406957 Msa1301370:CDS 35.0%
TGTTGCTAGATTAATGGTAC+TGG + chr8_3:63407104-63407123 Msa1301370:intron 35.0%
ACAACAAATCACTCAGTCAA+GGG - chr8_3:63407139-63407158 None:intergenic 35.0%
TACAACAAATCACTCAGTCA+AGG - chr8_3:63407140-63407159 None:intergenic 35.0%
!! CTGAGTGATTTGTTGTATTC+TGG + chr8_3:63407143-63407162 Msa1301370:intron 35.0%
GTATATAGGAGACAAGATTG+CGG - chr8_3:63407343-63407362 None:intergenic 35.0%
CAAATTATGCTTGCAGGATT+CGG + chr8_3:63407497-63407516 Msa1301370:intron 35.0%
TATGTTGAAATTGCAGATGG+CGG + chr8_3:63407562-63407581 Msa1301370:CDS 35.0%
TGTTCAGTTCCTAAACTAGC+TGG + chr8_3:63405224-63405243 Msa1301370:CDS 40.0%
TATGTATTGCAGGGTTGCAA+AGG + chr8_3:63405368-63405387 Msa1301370:intron 40.0%
ATGAAGGGTTTATGTGTAGC+TGG - chr8_3:63405650-63405669 None:intergenic 40.0%
TGGTCCAACTCAGTTATTTG+AGG + chr8_3:63405782-63405801 Msa1301370:intron 40.0%
TCGACCTCAAATAACTGAGT+TGG - chr8_3:63405789-63405808 None:intergenic 40.0%
!! GTGTGAAGTGTTGCAATGTT+TGG + chr8_3:63405955-63405974 Msa1301370:intron 40.0%
GCAAAAAACAAAGTGGTTGG+TGG + chr8_3:63406023-63406042 Msa1301370:intron 40.0%
CGATCTGCGATTGACAAAAT+TGG + chr8_3:63406435-63406454 Msa1301370:intron 40.0%
! TATTGCATTTTGTCGTTCGC+AGG + chr8_3:63406480-63406499 Msa1301370:intron 40.0%
CATTGGATGTCAGAGAATTG+CGG + chr8_3:63406664-63406683 Msa1301370:intron 40.0%
ATTATGTCCCATGGGAACAA+TGG + chr8_3:63406814-63406833 Msa1301370:CDS 40.0%
TCATCACCGAAGAACTCAAA+GGG - chr8_3:63406929-63406948 None:intergenic 40.0%
TTCATCACCGAAGAACTCAA+AGG - chr8_3:63406930-63406949 None:intergenic 40.0%
GAGTTCTTCGGTGATGAAAA+TGG + chr8_3:63406932-63406951 Msa1301370:CDS 40.0%
TCGGTGATGAAAATGGAAAC+GGG + chr8_3:63406939-63406958 Msa1301370:CDS 40.0%
AACAAATCACTCAGTCAAGG+GGG - chr8_3:63407137-63407156 None:intergenic 40.0%
CAACAAATCACTCAGTCAAG+GGG - chr8_3:63407138-63407157 None:intergenic 40.0%
GACGCCTTAATCGTATTCAA+TGG + chr8_3:63407194-63407213 Msa1301370:intron 40.0%
GACAAGATTGCGGTATTTGA+AGG - chr8_3:63407333-63407352 None:intergenic 40.0%
GGCCACTGTAATAATGTTCA+AGG + chr8_3:63407392-63407411 Msa1301370:CDS 40.0%
ATGTCGGATGCATATGTTAC+TGG + chr8_3:63407440-63407459 Msa1301370:intron 40.0%
AACAATGGTCATCTGCAAGA+AGG - chr8_3:63407592-63407611 None:intergenic 40.0%
! CTTGCAGATGACCATTGTTT+TGG + chr8_3:63407593-63407612 Msa1301370:CDS 40.0%
GAGATTCAAGGCCAAAACAA+TGG - chr8_3:63407607-63407626 None:intergenic 40.0%
ACATATCCTCAGGAGATTCA+AGG - chr8_3:63407619-63407638 None:intergenic 40.0%
GGGAAGTTGAATCTTTCTCT+GGG + chr8_3:63407700-63407719 Msa1301370:exon 40.0%
! TGTAACCATAGAATGATGGG+AGG + chr8_3:63407776-63407795 Msa1301370:three_prime_UTR 40.0%
! TTGAGGCCTGATTTGAAGAG+AGG + chr8_3:63405427-63405446 Msa1301370:CDS 45.0%
!! ATCCCAGGTTTCTGTTTCTG+AGG + chr8_3:63405745-63405764 Msa1301370:intron 45.0%
CACCTCAGAAACAGAAACCT+GGG - chr8_3:63405750-63405769 None:intergenic 45.0%
ACACCTCAGAAACAGAAACC+TGG - chr8_3:63405751-63405770 None:intergenic 45.0%
!!! CTGAGGTGTCGTCATTGTTT+TGG + chr8_3:63405762-63405781 Msa1301370:intron 45.0%
TTCTTGTCTGCTACTCTTGC+TGG - chr8_3:63405839-63405858 None:intergenic 45.0%
TTATGTGTGAACCTGGGAGT+AGG + chr8_3:63405984-63406003 Msa1301370:intron 45.0%
!! AAAACAAAGTGGTTGGTGGC+TGG + chr8_3:63406027-63406046 Msa1301370:intron 45.0%
TCGCAGATCGCGTAAATTGA+CGG - chr8_3:63406425-63406444 None:intergenic 45.0%
CGCGTTAGTGATTTGACGTT+CGG + chr8_3:63406516-63406535 Msa1301370:intron 45.0%
TAGTGATTTGACGTTCGGAG+TGG + chr8_3:63406521-63406540 Msa1301370:intron 45.0%
! GGAGTGGATTTGAAGCAGAT+AGG + chr8_3:63406537-63406556 Msa1301370:intron 45.0%
GGACAATCCATTGTTCCCAT+GGG - chr8_3:63406824-63406843 None:intergenic 45.0%
AGGACAATCCATTGTTCCCA+TGG - chr8_3:63406825-63406844 None:intergenic 45.0%
TCAAAGCCTGCACACATGTA+GGG - chr8_3:63406869-63406888 None:intergenic 45.0%
ATCAAAGCCTGCACACATGT+AGG - chr8_3:63406870-63406889 None:intergenic 45.0%
TTATGCTTGCAGGATTCGGA+TGG + chr8_3:63407501-63407520 Msa1301370:intron 45.0%
!!! TTTTGGCCTTGAATCTCCTG+AGG + chr8_3:63407610-63407629 Msa1301370:CDS 45.0%
CTTCTTGAGCACATATCCTC+AGG - chr8_3:63407629-63407648 None:intergenic 45.0%
GGGGAAGTTGAATCTTTCTC+TGG + chr8_3:63407699-63407718 Msa1301370:exon 45.0%
TACCAATACAATGCAGCTGC+AGG + chr8_3:63407747-63407766 Msa1301370:three_prime_UTR 45.0%
TACCTGCAGCTGCATTGTAT+TGG - chr8_3:63407752-63407771 None:intergenic 45.0%
GGAAACCTCCCATCATTCTA+TGG - chr8_3:63407784-63407803 None:intergenic 45.0%
ATTGCAGGGTTGCAAAGGTG+TGG + chr8_3:63405373-63405392 Msa1301370:intron 50.0%
!! AGGCACTGAGATCACACCAT+AGG - chr8_3:63406194-63406213 None:intergenic 50.0%
GTGATCTCAGTGCCTTTGAC+TGG + chr8_3:63406199-63406218 Msa1301370:intron 50.0%
! TGCATTTTGTCGTTCGCAGG+AGG + chr8_3:63406483-63406502 Msa1301370:intron 50.0%
! GCACACATGTAGGGTAATGG+CGG - chr8_3:63406860-63406879 None:intergenic 50.0%
CCTGCACACATGTAGGGTAA+TGG - chr8_3:63406863-63406882 None:intergenic 50.0%
CCATTACCCTACATGTGTGC+AGG + chr8_3:63406860-63406879 Msa1301370:CDS 50.0%
TGTGAACCTGGGAGTAGGAG+TGG + chr8_3:63405989-63406008 Msa1301370:intron 55.0%
CCAGATCCACTCCTACTCCC+AGG - chr8_3:63405998-63406017 None:intergenic 60.0%
CCTGGGAGTAGGAGTGGATC+TGG + chr8_3:63405995-63406014 Msa1301370:intron 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 63405113 63407805 63405113 ID=Msa1301370;Name=Msa1301370
chr8_3 mRNA 63405113 63407805 63405113 ID=Msa1301370-mRNA-1;Parent=Msa1301370;Name=Msa1301370-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0|0.16|1|0.2|0.33|6|96|254
chr8_3 exon 63405113 63405245 63405113 ID=Msa1301370-mRNA-1:exon:18961;Parent=Msa1301370-mRNA-1
chr8_3 exon 63405380 63405468 63405380 ID=Msa1301370-mRNA-1:exon:18962;Parent=Msa1301370-mRNA-1
chr8_3 exon 63406771 63406799 63406771 ID=Msa1301370-mRNA-1:exon:18963;Parent=Msa1301370-mRNA-1
chr8_3 exon 63406814 63407023 63406814 ID=Msa1301370-mRNA-1:exon:18964;Parent=Msa1301370-mRNA-1
chr8_3 exon 63407320 63407426 63407320 ID=Msa1301370-mRNA-1:exon:18965;Parent=Msa1301370-mRNA-1
chr8_3 exon 63407513 63407805 63407513 ID=Msa1301370-mRNA-1:exon:18966;Parent=Msa1301370-mRNA-1
chr8_3 CDS 63405113 63405245 63405113 ID=Msa1301370-mRNA-1:cds;Parent=Msa1301370-mRNA-1
chr8_3 CDS 63405380 63405468 63405380 ID=Msa1301370-mRNA-1:cds;Parent=Msa1301370-mRNA-1
chr8_3 CDS 63406771 63406799 63406771 ID=Msa1301370-mRNA-1:cds;Parent=Msa1301370-mRNA-1
chr8_3 CDS 63406814 63407023 63406814 ID=Msa1301370-mRNA-1:cds;Parent=Msa1301370-mRNA-1
chr8_3 CDS 63407320 63407426 63407320 ID=Msa1301370-mRNA-1:cds;Parent=Msa1301370-mRNA-1
chr8_3 CDS 63407513 63407709 63407513 ID=Msa1301370-mRNA-1:cds;Parent=Msa1301370-mRNA-1
chr8_3 three_prime_UTR 63407710 63407805 63407710 ID=Msa1301370-mRNA-1:three_prime_utr;Parent=Msa1301370-mRNA-1
Gene Sequence

>Msa1301370

ATGGGTCGCCATTTCTGTTCTTTAAAGCAAAAACTAAGAAAAGGTTTATGGTCCCCTGAAAAAGATGAGAAGCTTTTCAATTACATAACGATGTTTGGTGTTGGATGTTGTTGTTCAGTTCCTAAACTAGCTGGGTTGCAAAGGTGTGGAAAGAGTTGTATATTAAGATGGATAAACTATTTGAGGCCTGATTTGAAGAGAGGAATGTTCTCAAAACAAGAGAAACATGTTATCCTCCTTTGGTACAATATATTATGTCCCATGGGAACAATGGATTGTCCTTCTTATTATGTTCCGCCATTACCCTACATGTGTGCAGGCTTTGATAGTGACCCTTATCAGTTTCAATCTACACCTTTGATTCCCTTTGAGTTCTTCGGTGATGAAAATGGAAACGGGTGTTCTGTTATTAAGTTTTTCCTTTTCTTTCGTTGTTTTTTCATACTCTCTTTGCCTTTAGTGCGCTTTACACCTTCAAATACCGCAATCTTGTCTCCTATATACTATGTCATTTTTACAACACTTGCAATATTGGCCACTGTAATAATGTTCAAGGTACCGCCTACAAGATTCGGATGGCCAAAGTTTTTCAACTTTACATTCTTTCATATTACATATATGTTGAAATTGCAGATGGCGGCTTGCCTTCTTGCAGATGACCATTGTTTTGGCCTTGAATCTCCTGAGGATATGTGCTCAAGAAGACAAGATTTATGTTTGATGGTTTTATATGACATAGTAAAGGTCTTAATTAGGGGAAGTTGA
Protein sequence

>Msa1301370

MGRHFCSLKQKLRKGLWSPEKDEKLFNYITMFGVGCCCSVPKLAGLQRCGKSCILRWINYLRPDLKRGMFSKQEKHVILLWYNILCPMGTMDCPSYYVPPLPYMCAGFDSDPYQFQSTPLIPFEFFGDENGNGCSVIKFFLFFRCFFILSLPLVRFTPSNTAILSPIYYVIFTTLAILATVIMFKVPPTRFGWPKFFNFTFFHITYMLKLQMAACLLADDHCFGLESPEDMCSRRQDLCLMVLYDIVKVLIRGS*