AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1302180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1302180 MtrunA17_Chr3g0082121 70.720 403 110 1 42 444 7 401 0.0 600
Msa1302180 MtrunA17_Chr3g0082121 67.778 180 57 1 473 651 515 694 5.07e-73 251
Msa1302180 MtrunA17_Chr1g0164591 74.048 289 67 1 156 444 1 281 5.08e-157 458
Msa1302180 MtrunA17_Chr2g0324011 48.656 372 186 4 72 441 4 372 1.75e-115 361
Msa1302180 MtrunA17_Chr2g0324011 41.667 108 59 1 460 563 476 583 2.05e-18 89.7
Msa1302180 MtrunA17_Chr6g0458391 40.732 410 221 4 35 443 184 572 4.00e-99 323
Msa1302180 MtrunA17_Chr6g0458391 39.844 128 75 2 76 203 89 214 2.14e-19 93.2
Msa1302180 MtrunA17_Chr6g0458391 44.860 107 47 3 451 549 664 766 1.42e-18 90.5
Msa1302180 MtrunA17_Chr1g0203721 40.331 362 212 4 83 441 68 428 5.71e-88 296
Msa1302180 MtrunA17_Chr1g0203721 37.654 162 97 2 457 614 528 689 4.94e-23 105
Msa1302180 MtrunA17_Chr7g0258861 50.342 292 137 6 74 360 6 294 9.94e-86 273
Msa1302180 MtrunA17_Chr5g0448761 37.067 375 228 4 74 441 56 429 1.18e-83 282
Msa1302180 MtrunA17_Chr5g0448761 32.593 135 89 2 492 625 569 702 1.76e-12 71.2
Msa1302180 MtrunA17_Chr1g0202341 34.699 366 228 5 76 436 49 408 1.92e-66 233
Msa1302180 MtrunA17_Chr8g0363841 33.423 371 227 8 77 436 13 374 4.71e-66 231
Msa1302180 MtrunA17_Chr8g0363841 40.000 65 39 0 484 548 513 577 9.77e-11 65.5
Msa1302180 MtrunA17_Chr2g0287651 35.946 370 221 7 80 443 77 436 5.90e-64 229
Msa1302180 MtrunA17_Chr2g0329031 32.432 370 218 8 78 436 14 362 1.35e-55 203
Msa1302180 MtrunA17_Chr1g0203051 31.856 361 227 6 90 443 91 439 5.71e-54 197
Msa1302180 MtrunA17_Chr1g0207551 31.351 370 235 5 71 432 27 385 2.08e-53 198
Msa1302180 MtrunA17_Chr3g0080351 33.511 376 211 9 75 436 73 423 1.21e-52 196
Msa1302180 MtrunA17_Chr2g0296781 34.921 315 194 5 82 393 1 307 7.26e-51 189
Msa1302180 MtrunA17_Chr2g0276841 31.522 368 239 9 78 436 70 433 3.22e-49 184
Msa1302180 MtrunA17_Chr1g0198761 32.626 377 229 10 83 442 52 420 6.49e-49 184
Msa1302180 MtrunA17_Chr1g0149131 86.207 87 12 0 357 443 1 87 2.38e-48 166
Msa1302180 MtrunA17_Chr5g0401121 61.644 146 52 1 39 184 21 162 8.20e-48 166
Msa1302180 MtrunA17_Chr2g0294841 32.537 335 212 6 70 393 37 368 2.29e-47 180
Msa1302180 MtrunA17_Chr2g0287061 30.623 369 215 8 74 441 179 507 7.49e-47 179
Msa1302180 MtrunA17_Chr5g0440451 30.688 378 230 8 77 436 42 405 7.37e-46 176
Msa1302180 MtrunA17_Chr5g0440451 36.364 154 91 5 462 610 513 664 1.77e-15 80.9
Msa1302180 MtrunA17_Chr5g0441581 31.768 362 230 7 77 436 31 377 1.12e-45 174
Msa1302180 MtrunA17_Chr2g0290391 30.548 383 235 11 76 436 49 422 2.91e-43 167
Msa1302180 MtrunA17_Chr5g0448511 38.298 188 115 1 257 443 16 203 4.31e-41 158
Msa1302180 MtrunA17_Chr5g0448511 29.268 164 111 2 489 652 338 496 3.35e-12 69.7
Msa1302180 MtrunA17_Chr5g0431001 30.952 336 202 9 78 393 61 386 2.77e-40 155
Msa1302180 MtrunA17_Chr1g0196541 27.248 367 247 8 82 441 1 354 5.96e-40 157
Msa1302180 MtrunA17_Chr2g0291591 29.365 378 235 10 77 441 63 421 1.50e-39 154
Msa1302180 MtrunA17_Chr3g0118611 37.569 181 112 1 257 436 122 302 7.89e-38 151
Msa1302180 MtrunA17_Chr3g0118611 36.090 133 74 3 483 610 435 561 5.43e-14 75.9
Msa1302180 MtrunA17_Chr6g0477261 36.842 190 119 1 205 393 7 196 7.32e-37 147
Msa1302180 MtrunA17_Chr2g0291581 30.573 314 193 8 78 386 71 364 3.16e-35 142
Msa1302180 MtrunA17_Chr7g0238821 43.119 109 58 3 82 189 1 106 2.43e-17 78.2
Msa1302180 MtrunA17_Chr4g0033611 42.593 108 56 3 77 182 75 178 4.79e-16 79.0
Msa1302180 MtrunA17_Chr2g0329421 39.815 108 59 3 77 182 26 129 1.02e-15 76.6
Msa1302180 MtrunA17_Chr3g0078041 39.048 105 62 2 77 180 49 152 1.17e-13 71.2
Msa1302180 MtrunA17_Chr7g0233911 30.496 141 84 3 47 180 3 136 1.42e-11 64.7
Msa1302180 MtrunA17_Chr2g0329361 33.858 127 77 4 64 184 44 169 1.51e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1302180 AT4G38180.1 38.032 376 227 4 65 436 60 433 1.52e-82 279
Msa1302180 AT4G15090.1 33.056 360 237 4 75 432 48 405 4.61e-61 221
Msa1302180 AT4G15090.5 33.056 360 237 4 75 432 48 405 4.61e-61 221
Msa1302180 AT4G15090.3 33.056 360 237 4 75 432 48 405 4.61e-61 221
Msa1302180 AT4G15090.2 33.056 360 237 4 75 432 48 405 4.61e-61 221
Msa1302180 AT4G15090.4 33.056 360 237 4 75 432 48 405 4.61e-61 221
Msa1302180 AT1G76320.3 32.493 357 228 6 82 436 1 346 4.46e-53 195
Msa1302180 AT1G76320.2 32.493 357 228 6 82 436 1 346 1.12e-52 195
Msa1302180 AT1G76320.1 32.493 357 228 6 82 436 1 346 1.16e-52 195
Msa1302180 AT1G76320.4 32.493 357 228 6 82 436 1 346 1.16e-52 195
Msa1302180 AT1G10240.2 32.831 332 210 9 71 393 41 368 2.33e-49 185
Msa1302180 AT1G10240.1 32.831 332 210 9 71 393 41 368 2.33e-49 185
Msa1302180 AT3G22170.2 29.839 372 223 7 75 432 67 414 1.38e-48 184
Msa1302180 AT3G22170.2 36.036 111 65 2 483 593 553 657 4.54e-13 73.6
Msa1302180 AT3G22170.1 29.839 372 223 7 75 432 67 414 1.38e-48 184
Msa1302180 AT3G22170.1 36.036 111 65 2 483 593 553 657 4.54e-13 73.6
Msa1302180 AT2G27110.2 29.897 388 234 8 70 449 41 398 8.43e-45 173
Msa1302180 AT2G27110.2 33.113 151 92 5 462 606 488 635 6.39e-13 73.2
Msa1302180 AT2G27110.1 29.897 388 234 8 70 449 41 398 8.43e-45 173
Msa1302180 AT2G27110.1 33.113 151 92 5 462 606 488 635 6.39e-13 73.2
Msa1302180 AT3G06250.2 28.610 374 223 7 69 441 181 511 3.78e-43 167
Msa1302180 AT3G06250.1 28.610 374 223 7 69 441 181 511 3.78e-43 167
Msa1302180 AT3G06250.3 28.610 374 223 7 69 441 181 511 3.78e-43 167
Msa1302180 AT2G32250.5 27.701 361 212 8 79 436 39 353 3.11e-41 162
Msa1302180 AT2G32250.6 27.701 361 212 8 79 436 39 353 4.85e-41 161
Msa1302180 AT2G32250.1 27.701 361 212 8 79 436 39 353 4.85e-41 161
Msa1302180 AT2G32250.3 27.701 361 212 8 79 436 39 353 4.85e-41 161
Msa1302180 AT2G32250.2 27.701 361 212 8 79 436 39 353 5.77e-41 161
Msa1302180 AT2G32250.4 27.701 361 212 8 79 436 39 353 5.77e-41 161
Msa1302180 AT2G32250.8 27.654 358 210 8 82 436 1 312 6.19e-41 161
Msa1302180 AT2G32250.7 27.654 358 210 8 82 436 1 312 7.52e-41 160
Msa1302180 AT5G18960.2 28.191 376 227 9 71 444 204 538 5.95e-40 158
Msa1302180 AT5G18960.2 32.051 156 86 4 59 214 28 163 3.51e-11 67.4
Msa1302180 AT5G18960.1 28.191 376 227 9 71 444 204 538 5.95e-40 158
Msa1302180 AT5G18960.1 32.051 156 86 4 59 214 28 163 3.51e-11 67.4
Msa1302180 AT5G28530.1 26.425 386 259 9 78 444 55 434 6.15e-38 151
Msa1302180 AT5G28530.3 26.425 386 259 9 78 444 55 434 6.61e-38 151
Msa1302180 AT5G28530.2 26.425 386 259 9 78 444 55 434 6.61e-38 151
Msa1302180 AT2G27110.3 36.683 199 120 2 257 449 55 253 1.09e-35 144
Msa1302180 AT2G27110.3 33.113 151 92 5 462 606 343 490 6.64e-13 72.8
Msa1302180 AT1G80010.1 27.621 391 252 9 63 437 80 455 1.89e-34 140
Msa1302180 AT1G52520.1 29.358 327 196 9 78 393 85 387 3.76e-33 137
Msa1302180 AT4G19990.5 27.198 364 213 7 84 432 27 353 2.29e-30 128
Msa1302180 AT4G19990.3 27.198 364 213 7 84 432 27 353 2.42e-30 128
Msa1302180 AT4G19990.4 27.198 364 213 7 84 432 27 353 2.42e-30 128
Msa1302180 AT4G19990.6 27.198 364 213 7 84 432 27 353 2.60e-30 128
Msa1302180 AT4G19990.2 27.198 364 213 7 84 432 27 353 2.60e-30 128
Msa1302180 AT4G19990.7 27.198 364 213 7 84 432 41 367 2.73e-30 128
Msa1302180 AT4G38170.1 32.642 193 124 3 246 436 10 198 1.30e-29 124
Msa1302180 AT4G19990.1 26.284 331 192 7 117 432 3 296 4.59e-23 105
Msa1302180 AT5G28530.5 23.913 322 183 9 78 393 55 320 1.77e-19 93.6
Msa1302180 AT5G28530.4 23.913 322 183 9 78 393 55 320 1.79e-19 93.6
Msa1302180 AT2G43280.1 40.171 117 66 3 76 189 20 135 3.84e-17 81.3
Msa1302180 AT3G59470.3 34.483 174 96 5 25 182 1 172 1.92e-15 77.4
Msa1302180 AT3G59470.1 34.483 174 96 5 25 182 1 172 1.92e-15 77.4
Msa1302180 AT3G59470.2 34.483 174 96 5 25 182 13 184 2.15e-15 77.4
Msa1302180 AT4G12850.4 36.508 126 73 3 78 203 11 129 1.50e-13 68.9
Msa1302180 AT2G43280.2 38.000 100 58 3 93 189 2 100 8.45e-13 67.8
Msa1302180 AT4G12850.2 39.423 104 59 2 78 181 11 110 1.11e-12 66.2
Msa1302180 AT4G12850.1 38.462 104 60 2 78 181 11 110 2.70e-12 66.6
Msa1302180 AT3G07500.1 38.318 107 65 1 76 182 31 136 6.90e-12 66.2

Find 143 sgRNAs with CRISPR-Local

Find 495 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCAAATAACAAACATATTT+TGG 0.063618 8_3:+64669867 Msa1302180:CDS
TTAACTGGTTTACTTGTTTA+TGG 0.110176 8_3:+64671723 Msa1302180:three_prime_UTR
AGACAATTCTGTTGATAAAT+TGG 0.199895 8_3:+64669178 Msa1302180:CDS
CATGAATCCGTCGTCTATTT+TGG 0.206115 8_3:+64669154 Msa1302180:CDS
GCACAAATGATCAATGATTA+TGG 0.212099 8_3:+64669896 Msa1302180:CDS
CATTTCATGGATTGTGTACT+TGG 0.244889 8_3:+64670179 Msa1302180:CDS
TTTGGTATTCGTCGAGAATA+TGG 0.265133 8_3:+64669335 Msa1302180:CDS
ATGTCCTCCAATGATTAAAT+TGG 0.279912 8_3:+64671008 Msa1302180:CDS
ACAATCTCTTGTTTGTGTTT+TGG 0.286322 8_3:+64671687 Msa1302180:three_prime_UTR
GAGATGGAGGAGACTCTTTA+TGG 0.290344 8_3:+64662764 Msa1302180:CDS
ATATATTCATGCAAATCTTT+TGG 0.296908 8_3:-64669665 None:intergenic
TAAACAAGTAAACCAGTTAA+AGG 0.302674 8_3:-64671720 None:intergenic
CACTGTACCGCTTCATGAAA+TGG 0.307019 8_3:-64670981 None:intergenic
ACAAGCATCACAAATTATAA+TGG 0.308529 8_3:+64669622 Msa1302180:CDS
GGTTTCGCAACTCCTTTAAC+TGG 0.319368 8_3:+64671708 Msa1302180:three_prime_UTR
AGAATTTGCTTCGAACAAAA+AGG 0.321129 8_3:+64669741 Msa1302180:CDS
CGCTTTAGTATATAGTGTTC+AGG 0.332129 8_3:-64670886 None:intergenic
AATGAGTATAGTAAAAGAAT+TGG 0.336174 8_3:+64669311 Msa1302180:CDS
ATTTCACTTGATCGAAAGAT+AGG 0.345588 8_3:+64669500 Msa1302180:CDS
GTTATGTCGGAGACATTTCA+TGG 0.359089 8_3:+64670166 Msa1302180:CDS
CTGTTGGCCAATTTAATCAT+TGG 0.359632 8_3:-64671015 None:intergenic
ATTATAATGGGAGATGAATC+TGG 0.362761 8_3:+64669635 Msa1302180:CDS
CGGCCGTTGGGAGTATTTGT+TGG 0.367992 8_3:+64669974 Msa1302180:CDS
ACTTGTTGAGCATAATGTTT+TGG 0.369471 8_3:+64670333 Msa1302180:CDS
CACCGCATACAAGACAAATA+AGG 0.371786 8_3:+64669946 Msa1302180:CDS
CTTCGCTTGATTGTGTCCCT+TGG 0.383017 8_3:-64671558 None:intergenic
ATATAAGACAAAACGCTCTA+AGG 0.384570 8_3:+64670203 Msa1302180:CDS
TTTGTCTTCATTGTGCCCCT+TGG 0.391077 8_3:-64671612 None:intergenic
TATAGTAAAAGAATTGGATT+TGG 0.393932 8_3:+64669317 Msa1302180:CDS
CTTGACAACGGTTTCCATGC+TGG 0.393949 8_3:-64671196 None:intergenic
GATATTCCTCGTATTCCTCT+TGG 0.399365 8_3:-64670672 None:intergenic
GCTGGACTCTTCATAAACTT+TGG 0.408472 8_3:-64671073 None:intergenic
AGAATCAAGTGGAATGGTTC+AGG 0.410213 8_3:+64671137 Msa1302180:CDS
CTCAATTCAATTACTCTCAA+TGG 0.424494 8_3:+64671460 Msa1302180:CDS
TGTAAAAGAGAGGACAGTTA+TGG 0.424574 8_3:+64670753 Msa1302180:CDS
CAAGCATCACAAATTATAAT+GGG 0.429280 8_3:+64669623 Msa1302180:CDS
AGGATGGACTCACTAAAGTA+TGG 0.430267 8_3:+64669761 Msa1302180:CDS
CAATCAAGCGAAGTTGATAA+TGG 0.430767 8_3:+64671568 Msa1302180:CDS
ATCATGTGAACATACTCTTC+CGG 0.437349 8_3:-64669572 None:intergenic
CATCATCAAGCTTCAATTCA+AGG 0.437452 8_3:+64671487 Msa1302180:CDS
GGGTGTAAGCATTTCCGGCT+TGG 0.443877 8_3:-64670631 None:intergenic
ACAAGACAAATAAGGGTTAT+CGG 0.444223 8_3:+64669954 Msa1302180:CDS
TGCATAAAGGTGTTGAAAGA+AGG 0.445593 8_3:+64670703 Msa1302180:CDS
CTCTATCCCACCAACCTGCT+TGG 0.449496 8_3:-64669690 None:intergenic
GACAAAAGACGTCAACCGAC+TGG 0.454042 8_3:+64669431 Msa1302180:CDS
ACCGCATACAAGACAAATAA+GGG 0.454406 8_3:+64669947 Msa1302180:CDS
AATGGGATTTGAAGAGGAGA+TGG 0.454609 8_3:+64662748 Msa1302180:CDS
GTAAAAGAGAGGACAGTTAT+GGG 0.455513 8_3:+64670754 Msa1302180:CDS
GGCGCGGTGGTTGCAAACTC+CGG 0.457383 8_3:+64662683 Msa1302180:CDS
GGTTGGGAAGTAATCAAGAT+TGG 0.457422 8_3:+64670926 Msa1302180:CDS
TCAAATAACCACTGAAAAGA+AGG 0.457713 8_3:-64670058 None:intergenic
GGGATTTGAAGAGGAGATGG+AGG 0.458514 8_3:+64662751 Msa1302180:CDS
CACAAATGATCAATGATTAT+GGG 0.462910 8_3:+64669897 Msa1302180:CDS
TGAAAGTCATAAAAGAAAGA+TGG 0.464163 8_3:-64669830 None:intergenic
ACTGTACCGCTTCATGAAAT+GGG 0.469454 8_3:-64670980 None:intergenic
AGCATCTTGATCCGTTAGAA+TGG 0.469910 8_3:-64670119 None:intergenic
AACCGGGTGTAATGCACGTA+TGG 0.472531 8_3:+64669475 Msa1302180:CDS
TGCCGACATCAAACCTCGCT+TGG 0.474766 8_3:+64669247 Msa1302180:CDS
ATATCAAGACACTTGCATAA+AGG 0.478993 8_3:+64670690 Msa1302180:CDS
ATCAATGATTATGGGTACTT+TGG 0.481641 8_3:+64669905 Msa1302180:CDS
GAAACCGTTGTCAAGGCAAA+AGG 0.483784 8_3:+64671204 Msa1302180:CDS
ACAGGAAAACCAGTCGTTAA+CGG 0.487443 8_3:+64671338 Msa1302180:CDS
AATAAGGGTTATCGGCCGTT+GGG 0.489965 8_3:+64669962 Msa1302180:CDS
CAAGATCGGACTACCTTTGT+CGG 0.492904 8_3:-64662717 None:intergenic
CATTGAGAGTAATTGAATTG+AGG 0.493852 8_3:-64671459 None:intergenic
TTTATCATTTCCAAGTGATA+CGG 0.494676 8_3:-64671163 None:intergenic
TTGGTATTCGTCGAGAATAT+GGG 0.496079 8_3:+64669336 Msa1302180:CDS
TGGACAAGAGAGGCAAGGTT+GGG 0.506606 8_3:+64670910 Msa1302180:CDS
GGGTATTTCTTTAGTTATGT+CGG 0.507658 8_3:+64670153 Msa1302180:CDS
TCTACGGCAGAAACTAGAAC+CGG 0.508196 8_3:+64669458 Msa1302180:CDS
CAAAATAGTTGAAGATATGT+TGG 0.512003 8_3:+64671095 Msa1302180:CDS
CATACTCTTCCGGCTGAAGA+AGG 0.514601 8_3:-64669562 None:intergenic
TTGGCCAATTTAATCATTGG+AGG 0.515834 8_3:-64671012 None:intergenic
CAATGTCAAGCTACAATCCA+AGG 0.517257 8_3:+64671595 Msa1302180:CDS
TTGTTGGACTTAATAATCAT+CGG 0.518157 8_3:+64669990 Msa1302180:CDS
CTATGTCAAACTGCAATCCA+AGG 0.518552 8_3:+64671541 Msa1302180:CDS
ATGGACAAGAGAGGCAAGGT+TGG 0.520495 8_3:+64670909 Msa1302180:CDS
GTTGGTGGGATAGAGATGGT+TGG 0.521078 8_3:+64669698 Msa1302180:CDS
AAATAAGGGTTATCGGCCGT+TGG 0.523633 8_3:+64669961 Msa1302180:CDS
CAAGATGCTGCGATGGCAAA+GGG 0.528327 8_3:+64670133 Msa1302180:CDS
GGCGCGGTGGTCACCGACAA+AGG 0.533048 8_3:+64662704 Msa1302180:CDS
GAAGTAATCAAGATTGGAAA+GGG 0.535116 8_3:+64670932 Msa1302180:CDS
CAATATTCTTGAACAAAATG+AGG 0.537039 8_3:+64669205 Msa1302180:CDS
GAGGAGACTCTTTATGGTGA+AGG 0.543041 8_3:+64662770 Msa1302180:CDS
ACCCTTATTTGTCTTGTATG+CGG 0.547780 8_3:-64669948 None:intergenic
AAATCTTGGATTGAGAAAGA+AGG 0.550086 8_3:+64671270 Msa1302180:CDS
ACAAAAGACGTCAACCGACT+GGG 0.550284 8_3:+64669432 Msa1302180:CDS
TCAAGATGCTGCGATGGCAA+AGG 0.551791 8_3:+64670132 Msa1302180:CDS
CTCTCATCGTCGCATATCTG+AGG 0.552258 8_3:+64669598 Msa1302180:CDS
ATGCATAGATCTACATGAAG+AGG 0.554261 8_3:+64670279 Msa1302180:CDS
TCACTAAAGTATGGTGAAGT+GGG 0.555591 8_3:+64669770 Msa1302180:CDS
GCATGAATATATGTCCAAGC+AGG 0.557373 8_3:+64669676 Msa1302180:CDS
TAGTCATGCTTTGAAAGTGT+TGG 0.559284 8_3:+64670840 Msa1302180:CDS
GTAATTGAATTGAGGTCAAG+TGG 0.560596 8_3:-64671451 None:intergenic
TTTCACTTGATCGAAAGATA+GGG 0.567868 8_3:+64669501 Msa1302180:CDS
AACACTATATACTAAAGCGA+TGG 0.568133 8_3:+64670890 Msa1302180:CDS
TCAACCGACTGGGGAGTCTA+CGG 0.568520 8_3:+64669442 Msa1302180:CDS
GCTCGAATGCTCGTCCAAGC+CGG 0.569311 8_3:+64670617 Msa1302180:CDS
CAGCATGGAAACCGTTGTCA+AGG 0.570861 8_3:+64671197 Msa1302180:CDS
GGAAGTAATCAAGATTGGAA+AGG 0.571376 8_3:+64670931 Msa1302180:CDS
TATATGTCCAAGCAGGTTGG+TGG 0.571492 8_3:+64669683 Msa1302180:CDS
GACAGTTATGGGAAATCCTA+CGG 0.576210 8_3:+64670765 Msa1302180:CDS
ACACAACCACCTTCTTCAGC+CGG 0.580649 8_3:+64669553 Msa1302180:CDS
TAAAGAGAAAGAAGCCAGCA+TGG 0.582901 8_3:+64671182 Msa1302180:CDS
ATCATCAAGCTTCAATTCAA+GGG 0.586404 8_3:+64671488 Msa1302180:CDS
AACGGATCAAGATGCTGCGA+TGG 0.589430 8_3:+64670126 Msa1302180:CDS
CTCACTAAAGTATGGTGAAG+TGG 0.589479 8_3:+64669769 Msa1302180:CDS
GTTCAGGTAACCGTATCACT+TGG 0.589853 8_3:+64671153 Msa1302180:CDS
AGATTCACATGCTACAAAGA+AGG 0.592653 8_3:+64669395 Msa1302180:CDS
CTTGAACAAAATGAGGAACA+TGG 0.594103 8_3:+64669212 Msa1302180:CDS
AAAGCCTAAAACCATTCTAA+CGG 0.600846 8_3:+64670108 Msa1302180:CDS
ACCGGGTGTAATGCACGTAT+GGG 0.604247 8_3:+64669476 Msa1302180:CDS
GGATATGATATTTGAATCCG+AGG 0.604669 8_3:+64669268 Msa1302180:CDS
TGAAATCCCATTTCATGAAG+CGG 0.605325 8_3:+64670974 Msa1302180:CDS
TGTATGTTTGTATTATGAGT+GGG 0.612907 8_3:+64671811 Msa1302180:three_prime_UTR
ACCCATACGTGCATTACACC+CGG 0.613296 8_3:-64669477 None:intergenic
GAATATATGTCCAAGCAGGT+TGG 0.614674 8_3:+64669680 Msa1302180:CDS
ATATGTCCAAGCAGGTTGGT+GGG 0.619945 8_3:+64669684 Msa1302180:CDS
GCAGGTTGGTGGGATAGAGA+TGG 0.629905 8_3:+64669694 Msa1302180:CDS
TCAAATATCATATCCAAGCG+AGG 0.630717 8_3:-64669260 None:intergenic
CTGTATGTTTGTATTATGAG+TGG 0.631600 8_3:+64671810 Msa1302180:three_prime_UTR
AATGTCAAGCTACAATCCAA+GGG 0.633905 8_3:+64671596 Msa1302180:CDS
GGTTGCAAACTCCGGCGCGG+TGG 0.640280 8_3:+64662691 Msa1302180:CDS
ACTCTTCCGGCTGAAGAAGG+TGG 0.641594 8_3:-64669559 None:intergenic
TCGAAAGATAGGGAAATACA+AGG 0.644061 8_3:+64669511 Msa1302180:CDS
CTACGGCAGAAACTAGAACC+GGG 0.648731 8_3:+64669459 Msa1302180:CDS
AGCGATGGACAAGAGAGGCA+AGG 0.649888 8_3:+64670905 Msa1302180:CDS
ATTATGATAATGTAAAAGAG+AGG 0.650123 8_3:+64670743 Msa1302180:CDS
TTTGTCGGTGACCACCGCGC+CGG 0.651434 8_3:-64662702 None:intergenic
TATGTCAAACTGCAATCCAA+GGG 0.654427 8_3:+64671542 Msa1302180:CDS
AGTCCAACAAATACTCCCAA+CGG 0.659244 8_3:-64669977 None:intergenic
GGATGGAGAATCAAGTGGAA+TGG 0.662094 8_3:+64671131 Msa1302180:CDS
ATCCAAGCGAGGTTTGATGT+CGG 0.664750 8_3:-64669249 None:intergenic
TCTGCCGTAGACTCCCCAGT+CGG 0.665919 8_3:-64669446 None:intergenic
CAAAAGACGTCAACCGACTG+GGG 0.676456 8_3:+64669433 Msa1302180:CDS
TGTGTGGATGGAGAATCAAG+TGG 0.678307 8_3:+64671126 Msa1302180:CDS
ACTAAAGCGATGGACAAGAG+AGG 0.678959 8_3:+64670900 Msa1302180:CDS
GGAATTCCAAGAGGAATACG+AGG 0.680926 8_3:+64670666 Msa1302180:CDS
AAATTCATAAGCATCTACCT+CGG 0.685544 8_3:-64669285 None:intergenic
TTGTCTACCAAAATAGACGA+CGG 0.691097 8_3:-64669161 None:intergenic
AAATATTGAGGAATTCCAAG+AGG 0.705411 8_3:+64670657 Msa1302180:CDS
GGTGGTTGCAAACTCCGGCG+CGG 0.710924 8_3:+64662688 Msa1302180:CDS
ATGTCAAGCTACAATCCAAG+GGG 0.727067 8_3:+64671597 Msa1302180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTATTTTTTTTAATTATA+TGG - chr8_3:64667876-64667895 None:intergenic 0.0%
!! AAAAAATTTATCAAACAAAA+AGG - chr8_3:64663112-64663131 None:intergenic 10.0%
!!! TTTTGTTTGATAAATTTTTT+TGG + chr8_3:64663112-64663131 Msa1302180:intron 10.0%
!!! TTAATTAAACTATTTTTTTG+AGG - chr8_3:64663263-64663282 None:intergenic 10.0%
!!! AATAATATAAAAGTTTTATC+AGG - chr8_3:64664783-64664802 None:intergenic 10.0%
!! ATTTAAGTAAATTATGAAAT+AGG - chr8_3:64665319-64665338 None:intergenic 10.0%
!! TTATAATAATTATAATACTC+GGG + chr8_3:64665407-64665426 Msa1302180:intron 10.0%
!! AATATAAAAAAAAAAAACAC+AGG + chr8_3:64665637-64665656 Msa1302180:intron 10.0%
!! ATATAAAAAAAAAAAACACA+GGG + chr8_3:64665638-64665657 Msa1302180:intron 10.0%
!! TATTTATTATTCATAAATCT+TGG - chr8_3:64665738-64665757 None:intergenic 10.0%
!! GAATGATAAATATAAAAAAA+CGG + chr8_3:64665782-64665801 Msa1302180:intron 10.0%
!! ATAAATTTAAAAAAAAACAC+GGG + chr8_3:64665862-64665881 Msa1302180:intron 10.0%
!! AATAATACTTTCTTTATATT+AGG + chr8_3:64666489-64666508 Msa1302180:intron 10.0%
!!! GATTTTTTTATTTTTTTAAG+TGG - chr8_3:64666537-64666556 None:intergenic 10.0%
!! CTTAAAAAAATAAAAAAATC+AGG + chr8_3:64666537-64666556 Msa1302180:intron 10.0%
!! TTGTTCAAAAAAAAAAAATT+GGG + chr8_3:64666567-64666586 Msa1302180:intron 10.0%
!! TAACGTTTAAAAATTATAAA+CGG - chr8_3:64667233-64667252 None:intergenic 10.0%
!!! TTTATAATTTTTAAACGTTA+GGG + chr8_3:64667233-64667252 Msa1302180:intron 10.0%
!! AAGTAATATAATATATTATG+TGG + chr8_3:64667697-64667716 Msa1302180:intron 10.0%
!! AGTAATATAATATATTATGT+GGG + chr8_3:64667698-64667717 Msa1302180:intron 10.0%
!!! TTTTTATTTGTTTGTTTTAA+AGG + chr8_3:64669057-64669076 Msa1302180:intron 10.0%
!!! TTTTATTTGTTTGTTTTAAA+GGG + chr8_3:64669058-64669077 Msa1302180:intron 10.0%
!! ATTCAATCAAATTTATTTGT+AGG - chr8_3:64662872-64662891 None:intergenic 15.0%
!! TCAATCAAAAAAAAACAAAA+TGG - chr8_3:64663141-64663160 None:intergenic 15.0%
!! ATATTAACTTTCATCATTAA+TGG + chr8_3:64663535-64663554 Msa1302180:intron 15.0%
!! TATTAACTTTCATCATTAAT+GGG + chr8_3:64663536-64663555 Msa1302180:intron 15.0%
!!! TTTTCCTTATAATAATCTTT+AGG - chr8_3:64663964-64663983 None:intergenic 15.0%
!! TTGATTAAATTAAACTATCA+TGG + chr8_3:64664291-64664310 Msa1302180:intron 15.0%
!!! TTTATACTATTTAAAATGCA+CGG + chr8_3:64664435-64664454 Msa1302180:intron 15.0%
!!! TGTATTAAAGTTAGTTTAAT+CGG - chr8_3:64664729-64664748 None:intergenic 15.0%
!! TCATAAATAATTAAAATGCA+TGG + chr8_3:64664906-64664925 Msa1302180:intron 15.0%
!! ATAATTTATTATATGACGTT+TGG - chr8_3:64665561-64665580 None:intergenic 15.0%
!! AATGGTAAATATAAAAAACA+CGG + chr8_3:64665673-64665692 Msa1302180:intron 15.0%
!!! TATTTATCATTCACAAATTT+TGG - chr8_3:64665774-64665793 None:intergenic 15.0%
!!! AATTTATCATTCAGAAATTT+TGG - chr8_3:64665810-64665829 None:intergenic 15.0%
!!! AATTTATAAGTCACAAATTT+TGG - chr8_3:64665849-64665868 None:intergenic 15.0%
!!! TATATACACTTAATTTGAAA+AGG + chr8_3:64666368-64666387 Msa1302180:intron 15.0%
!! CTTGTTCAAAAAAAAAAAAT+TGG + chr8_3:64666566-64666585 Msa1302180:intron 15.0%
!!! GTTTATAATTTTTAAACGTT+AGG + chr8_3:64667232-64667251 Msa1302180:intron 15.0%
!!! CAATAATCCTTTTTTATTAA+CGG - chr8_3:64667793-64667812 None:intergenic 15.0%
!! TAATAAAAAAGGATTATTGA+TGG + chr8_3:64667794-64667813 Msa1302180:intron 15.0%
!!! ACTGTTTTTAAATATCTCTA+CGG - chr8_3:64662844-64662863 None:intergenic 20.0%
!! GAATAAAACTATAGATGAAA+AGG + chr8_3:64662888-64662907 Msa1302180:intron 20.0%
!! ATTATAAAAAAAGACTCCTA+AGG + chr8_3:64663053-64663072 Msa1302180:intron 20.0%
!! TCATTAATTAATGTGTATGT+TGG - chr8_3:64663308-64663327 None:intergenic 20.0%
!! ATGAAAGTTAATATAAAGTG+AGG - chr8_3:64663529-64663548 None:intergenic 20.0%
!! TACATATACTTTATTAGTGT+TGG - chr8_3:64663633-64663652 None:intergenic 20.0%
!! GTGAAAAGAAAAAATTGATA+TGG + chr8_3:64663690-64663709 Msa1302180:intron 20.0%
!! TGATATGGATATTTACAATT+AGG + chr8_3:64663705-64663724 Msa1302180:intron 20.0%
!! ATAATTGTAGAATTGAAGTA+AGG - chr8_3:64664264-64664283 None:intergenic 20.0%
!!! TTATACTATTTAAAATGCAC+GGG + chr8_3:64664436-64664455 Msa1302180:intron 20.0%
!!! TAAATAACTTTGAAATGCAT+GGG + chr8_3:64664579-64664598 Msa1302180:intron 20.0%
!! ATTAAAATGCATGGAAAAAT+TGG + chr8_3:64664915-64664934 Msa1302180:intron 20.0%
!! TAAATTATGAAATAGGATCA+CGG - chr8_3:64665312-64665331 None:intergenic 20.0%
!! TCATAATTTACTTAAATGCA+CGG + chr8_3:64665322-64665341 Msa1302180:intron 20.0%
!! TATATTTATAAGCATGTGTT+TGG - chr8_3:64665623-64665642 None:intergenic 20.0%
!! ATGGTAAATATAAAAAACAC+GGG + chr8_3:64665674-64665693 Msa1302180:intron 20.0%
!! TATTTATCATTCACAAATCT+TGG - chr8_3:64665889-64665908 None:intergenic 20.0%
!!! TGAATTGTTTTAAAAGAACA+TGG - chr8_3:64665926-64665945 None:intergenic 20.0%
!! ACAGTTAAAACTTGAATATA+TGG - chr8_3:64666139-64666158 None:intergenic 20.0%
!! ATAGTGTGCTAAATTAAATT+AGG - chr8_3:64666696-64666715 None:intergenic 20.0%
!!! AATTTAATTTAGCACACTAT+TGG + chr8_3:64666696-64666715 Msa1302180:intron 20.0%
!! ATAGTTATAAGTCGAAATAA+AGG - chr8_3:64666782-64666801 None:intergenic 20.0%
!!! GAAATTTGTTAGAGTATAAT+TGG - chr8_3:64666881-64666900 None:intergenic 20.0%
!! TTTGAATGACACAAAAAATA+TGG - chr8_3:64666916-64666935 None:intergenic 20.0%
!!! CATAGTTTGTTACAATATAA+AGG + chr8_3:64667032-64667051 Msa1302180:intron 20.0%
!!! AGTCAAAATTTTATAGAGTT+GGG - chr8_3:64667324-64667343 None:intergenic 20.0%
!! TAAAAGACCGTTAATAAAAA+AGG + chr8_3:64667783-64667802 Msa1302180:intron 20.0%
!!! AAAAGTAGAAGTTTTTTTCT+TGG - chr8_3:64668050-64668069 None:intergenic 20.0%
!!! AAGAAAAAAACTTCTACTTT+TGG + chr8_3:64668049-64668068 Msa1302180:intron 20.0%
!!! ACTTAGGCTTTAAAAAAATA+TGG - chr8_3:64668222-64668241 None:intergenic 20.0%
!! TAAAGATGTTCATAAGATAT+AGG - chr8_3:64668332-64668351 None:intergenic 20.0%
!! CTATATGATCTAAGTTTAAA+TGG + chr8_3:64668358-64668377 Msa1302180:intron 20.0%
!!! AAATTGTTTTCTATTTTCCA+CGG - chr8_3:64668630-64668649 None:intergenic 20.0%
!! TAGCAGTAAACAAAAAAAAA+AGG - chr8_3:64668979-64668998 None:intergenic 20.0%
!! AATGAGTATAGTAAAAGAAT+TGG + chr8_3:64669311-64669330 Msa1302180:CDS 20.0%
!! TATAGTAAAAGAATTGGATT+TGG + chr8_3:64669317-64669336 Msa1302180:CDS 20.0%
!!! ATATATTCATGCAAATCTTT+TGG - chr8_3:64669668-64669687 None:intergenic 20.0%
!!! TTTCTTTTATGACTTTCAAA+TGG + chr8_3:64669835-64669854 Msa1302180:CDS 20.0%
!!! AGCAAATAACAAACATATTT+TGG + chr8_3:64669867-64669886 Msa1302180:CDS 20.0%
!!! GCAAATAACAAACATATTTT+GGG + chr8_3:64669868-64669887 Msa1302180:CDS 20.0%
!!! CATATGATTTTTTCGATTTA+AGG + chr8_3:64670370-64670389 Msa1302180:intron 20.0%
!!! TTTTTCGATTTAAGGAAAAA+TGG + chr8_3:64670378-64670397 Msa1302180:intron 20.0%
!!! TTTTCGATTTAAGGAAAAAT+GGG + chr8_3:64670379-64670398 Msa1302180:intron 20.0%
!! TATTTAAATCTGACTTCAAA+TGG - chr8_3:64670487-64670506 None:intergenic 20.0%
!!! ATTATGATAATGTAAAAGAG+AGG + chr8_3:64670743-64670762 Msa1302180:CDS 20.0%
!!! AGAATTTTGATGTAATTGAT+GGG + chr8_3:64671645-64671664 Msa1302180:three_prime_UTR 20.0%
!!! TCCGATCTTGATTTTTTTAA+TGG + chr8_3:64662730-64662749 Msa1302180:CDS 25.0%
! CCCATTAAAAAAATCAAGAT+CGG - chr8_3:64662734-64662753 None:intergenic 25.0%
!!! CCGATCTTGATTTTTTTAAT+GGG + chr8_3:64662731-64662750 Msa1302180:CDS 25.0%
!!! TTTTTTAATGGGATTTGAAG+AGG + chr8_3:64662742-64662761 Msa1302180:CDS 25.0%
! TTTGATGCATAAAAATATCG+AGG + chr8_3:64663376-64663395 Msa1302180:intron 25.0%
!!! TTTTTTTTTGAGCAAAATCG+AGG + chr8_3:64663407-64663426 Msa1302180:intron 25.0%
! AAAAACACGAGTAAAATGTA+CGG + chr8_3:64663473-64663492 Msa1302180:intron 25.0%
! TTATGTGTACTCTTAATCAA+TGG + chr8_3:64663741-64663760 Msa1302180:intron 25.0%
!! ATTTTTAACAAATCCAACAC+TGG + chr8_3:64663820-64663839 Msa1302180:intron 25.0%
!! CCTTATAATAATCTTTAGGA+CGG - chr8_3:64663960-64663979 None:intergenic 25.0%
! TTTCAACAACATATTTAGGA+CGG - chr8_3:64664071-64664090 None:intergenic 25.0%
! TGAGTTTCAACAACATATTT+AGG - chr8_3:64664075-64664094 None:intergenic 25.0%
! ATAAACTAACTTTGATGCAT+GGG + chr8_3:64664374-64664393 Msa1302180:intron 25.0%
! TTGACAAAAGTTTCGTATAT+AGG + chr8_3:64664470-64664489 Msa1302180:intron 25.0%
!!! GTAAATAACTTTGAAATGCA+TGG + chr8_3:64664578-64664597 Msa1302180:intron 25.0%
!! ATCAAAGTTAGTTTAGTTAG+TGG - chr8_3:64664660-64664679 None:intergenic 25.0%
! CTTAATCAAATAAAATGCAC+AGG + chr8_3:64664842-64664861 Msa1302180:intron 25.0%
! AAATTATGAAATAGGATCAC+GGG - chr8_3:64665311-64665330 None:intergenic 25.0%
! CATAATTTACTTAAATGCAC+GGG + chr8_3:64665323-64665342 Msa1302180:intron 25.0%
! ACTAAACTAATACTGATACA+TGG + chr8_3:64665360-64665379 Msa1302180:intron 25.0%
! CTAAACTAATACTGATACAT+GGG + chr8_3:64665361-64665380 Msa1302180:intron 25.0%
! AGCAAAGAACTACAAATTAT+AGG + chr8_3:64665486-64665505 Msa1302180:intron 25.0%
!!! TGTTTGGTTTCAATTTTAGA+GGG - chr8_3:64665607-64665626 None:intergenic 25.0%
! GATAATGATAGTTTAGATGT+TGG - chr8_3:64666096-64666115 None:intergenic 25.0%
! CATAGTAACCTATAATTGTT+TGG + chr8_3:64666304-64666323 Msa1302180:intron 25.0%
!! GAGTCAAAATTTTATAGAGT+TGG - chr8_3:64667325-64667344 None:intergenic 25.0%
! TATTGTAGTTGTAAGATAAG+TGG + chr8_3:64667595-64667614 Msa1302180:intron 25.0%
! ATTGTAGTTGTAAGATAAGT+GGG + chr8_3:64667596-64667615 Msa1302180:intron 25.0%
! ATTTAGAAAATGTAGTTGAG+TGG + chr8_3:64667653-64667672 Msa1302180:intron 25.0%
! TAATTATATGGACCTAGATA+TGG - chr8_3:64667864-64667883 None:intergenic 25.0%
! AAATGTTAACTTATGTCCTT+AGG - chr8_3:64668090-64668109 None:intergenic 25.0%
! ATCGAATGTGATTTATTTGA+GGG - chr8_3:64668135-64668154 None:intergenic 25.0%
! TATCGAATGTGATTTATTTG+AGG - chr8_3:64668136-64668155 None:intergenic 25.0%
!!! ATTTTTTTAAAGCCTAAGTC+TGG + chr8_3:64668223-64668242 Msa1302180:intron 25.0%
!! TAAGATATAGGCTTTTAAAC+AGG - chr8_3:64668320-64668339 None:intergenic 25.0%
!! AGTAAATGGATTTAAAAGAC+TGG - chr8_3:64668485-64668504 None:intergenic 25.0%
!! GAGAAATCGTTTTCTATTTT+CGG - chr8_3:64668692-64668711 None:intergenic 25.0%
! AACTTAACGAGAAACAAAAA+AGG - chr8_3:64669014-64669033 None:intergenic 25.0%
!!! TTGTTTCTCGTTAAGTTTTT+TGG + chr8_3:64669017-64669036 Msa1302180:intron 25.0%
!!! GTTTTTTGGTTTTTGTTTAC+AGG + chr8_3:64669031-64669050 Msa1302180:intron 25.0%
!! AGACAATTCTGTTGATAAAT+TGG + chr8_3:64669178-64669197 Msa1302180:CDS 25.0%
! CAATATTCTTGAACAAAATG+AGG + chr8_3:64669205-64669224 Msa1302180:CDS 25.0%
! ACAAGCATCACAAATTATAA+TGG + chr8_3:64669622-64669641 Msa1302180:CDS 25.0%
! CAAGCATCACAAATTATAAT+GGG + chr8_3:64669623-64669642 Msa1302180:CDS 25.0%
! TGAAAGTCATAAAAGAAAGA+TGG - chr8_3:64669833-64669852 None:intergenic 25.0%
! CACAAATGATCAATGATTAT+GGG + chr8_3:64669897-64669916 Msa1302180:CDS 25.0%
! TTGTTGGACTTAATAATCAT+CGG + chr8_3:64669990-64670009 Msa1302180:CDS 25.0%
!! AAGATGAATTTTTGAATGCA+TGG + chr8_3:64670302-64670321 Msa1302180:CDS 25.0%
!! TGGAATTCCTCAATATTTTT+GGG - chr8_3:64670655-64670674 None:intergenic 25.0%
!! TTGGAATTCCTCAATATTTT+TGG - chr8_3:64670656-64670675 None:intergenic 25.0%
! CAAAATAGTTGAAGATATGT+TGG + chr8_3:64671095-64671114 Msa1302180:CDS 25.0%
! TTTATCATTTCCAAGTGATA+CGG - chr8_3:64671166-64671185 None:intergenic 25.0%
!!! AGATTTAACTCGTTTTTTAG+TGG - chr8_3:64671256-64671275 None:intergenic 25.0%
! CTAAAAAACGAGTTAAATCT+TGG + chr8_3:64671256-64671275 Msa1302180:CDS 25.0%
!! CTGTGATTTTCTCTTTTTTT+GGG - chr8_3:64671322-64671341 None:intergenic 25.0%
!!! GAGAATTTTGATGTAATTGA+TGG + chr8_3:64671644-64671663 Msa1302180:three_prime_UTR 25.0%
! TAAACAAGTAAACCAGTTAA+AGG - chr8_3:64671723-64671742 None:intergenic 25.0%
!! TTAACTGGTTTACTTGTTTA+TGG + chr8_3:64671723-64671742 Msa1302180:three_prime_UTR 25.0%
! TGTATGTTTGTATTATGAGT+GGG + chr8_3:64671811-64671830 Msa1302180:three_prime_UTR 25.0%
AAACTATAGATGAAAAGGAG+AGG + chr8_3:64662893-64662912 Msa1302180:intron 30.0%
! AGAGTTTTCCAGATTTACTT+TGG + chr8_3:64662943-64662962 Msa1302180:intron 30.0%
AAAACACGAGTAAAATGTAC+GGG + chr8_3:64663474-64663493 Msa1302180:intron 30.0%
TTTGCTTTATGTATTGTCTC+AGG - chr8_3:64663583-64663602 None:intergenic 30.0%
CCGTCCTAAAGATTATTATA+AGG + chr8_3:64663957-64663976 Msa1302180:intron 30.0%
GATAAACTAACTTTGATGCA+TGG + chr8_3:64664373-64664392 Msa1302180:intron 30.0%
TAAACTAACTTTGATGCATG+GGG + chr8_3:64664375-64664394 Msa1302180:intron 30.0%
TCGTATATAGGTGAAATACA+TGG + chr8_3:64664482-64664501 Msa1302180:intron 30.0%
CGTATATAGGTGAAATACAT+GGG + chr8_3:64664483-64664502 Msa1302180:intron 30.0%
AAGTCTACACAATGTAAGAA+AGG + chr8_3:64665124-64665143 Msa1302180:intron 30.0%
AGTCTACACAATGTAAGAAA+GGG + chr8_3:64665125-64665144 Msa1302180:intron 30.0%
!! GTGTTTGGTTTCAATTTTAG+AGG - chr8_3:64665608-64665627 None:intergenic 30.0%
ACTTATGGCCAAACAATTAT+AGG - chr8_3:64666315-64666334 None:intergenic 30.0%
TCAAAAAACTAGTGCACTTA+TGG - chr8_3:64666330-64666349 None:intergenic 30.0%
!!! AAGTGCACTAGTTTTTTGAA+TGG + chr8_3:64666331-64666350 Msa1302180:intron 30.0%
!!! AGTGCACTAGTTTTTTGAAT+GGG + chr8_3:64666332-64666351 Msa1302180:intron 30.0%
AAATGCTTAGTTGCAATCAT+AGG + chr8_3:64666436-64666455 Msa1302180:intron 30.0%
!! AAGAAAGTATTATTTGAGCC+CGG - chr8_3:64666483-64666502 None:intergenic 30.0%
GTGTGCTAAATTAAATTAGG+AGG - chr8_3:64666693-64666712 None:intergenic 30.0%
TAATTTAGCACACTATTGGT+AGG + chr8_3:64666700-64666719 Msa1302180:intron 30.0%
GTTATAAGTCGAAATAAAGG+AGG - chr8_3:64666779-64666798 None:intergenic 30.0%
AGTATATACTAGCGATTAGA+CGG - chr8_3:64667270-64667289 None:intergenic 30.0%
! ACAAAAGTTCTGACAAATTC+TGG - chr8_3:64667514-64667533 None:intergenic 30.0%
!! CTCCTCTAAAACTCTAAAAT+GGG - chr8_3:64667623-64667642 None:intergenic 30.0%
!! ACTCCTCTAAAACTCTAAAA+TGG - chr8_3:64667624-64667643 None:intergenic 30.0%
!!! ATTTTAGAGTTTTAGAGGAG+TGG + chr8_3:64667623-64667642 Msa1302180:intron 30.0%
! GATTATTGATGGTAATTCCT+CGG + chr8_3:64667805-64667824 Msa1302180:intron 30.0%
TTTGCTAAACTAATAGCTTC+AGG + chr8_3:64667904-64667923 Msa1302180:intron 30.0%
TTGCTAAACTAATAGCTTCA+GGG + chr8_3:64667905-64667924 Msa1302180:intron 30.0%
! GTTCTTTAACTTATGTCCTA+AGG + chr8_3:64668071-64668090 Msa1302180:intron 30.0%
TTGAGGGTAGACATATTAAA+GGG - chr8_3:64668119-64668138 None:intergenic 30.0%
TTTGAGGGTAGACATATTAA+AGG - chr8_3:64668120-64668139 None:intergenic 30.0%
TTAAAAAAATATGGCAGGTC+AGG - chr8_3:64668213-64668232 None:intergenic 30.0%
!! AGGCTTTAAAAAAATATGGC+AGG - chr8_3:64668218-64668237 None:intergenic 30.0%
! AAATCGTTTTCTATTTTCGG+CGG - chr8_3:64668689-64668708 None:intergenic 30.0%
CATATGACTCTCATTTGAAA+AGG + chr8_3:64668839-64668858 Msa1302180:intron 30.0%
ATGATAACAGTACTACCATT+TGG - chr8_3:64668948-64668967 None:intergenic 30.0%
AAATTCATAAGCATCTACCT+CGG - chr8_3:64669288-64669307 None:intergenic 30.0%
GGGAATAAAAGCAAAAAAGA+CGG + chr8_3:64669356-64669375 Msa1302180:CDS 30.0%
GGAATAAAAGCAAAAAAGAC+GGG + chr8_3:64669357-64669376 Msa1302180:CDS 30.0%
GAATAAAAGCAAAAAAGACG+GGG + chr8_3:64669358-64669377 Msa1302180:CDS 30.0%
ATTTCACTTGATCGAAAGAT+AGG + chr8_3:64669500-64669519 Msa1302180:CDS 30.0%
TTTCACTTGATCGAAAGATA+GGG + chr8_3:64669501-64669520 Msa1302180:CDS 30.0%
! ATTATAATGGGAGATGAATC+TGG + chr8_3:64669635-64669654 Msa1302180:CDS 30.0%
! AGAATTTGCTTCGAACAAAA+AGG + chr8_3:64669741-64669760 Msa1302180:CDS 30.0%
GCACAAATGATCAATGATTA+TGG + chr8_3:64669896-64669915 Msa1302180:CDS 30.0%
ATCAATGATTATGGGTACTT+TGG + chr8_3:64669905-64669924 Msa1302180:CDS 30.0%
ACAAGACAAATAAGGGTTAT+CGG + chr8_3:64669954-64669973 Msa1302180:CDS 30.0%
! AAACAATACCTTCTTTTCAG+TGG + chr8_3:64670050-64670069 Msa1302180:CDS 30.0%
TCAAATAACCACTGAAAAGA+AGG - chr8_3:64670061-64670080 None:intergenic 30.0%
! TGAAACTTTTCTCAAAGCAA+TGG + chr8_3:64670078-64670097 Msa1302180:CDS 30.0%
! GAAACTTTTCTCAAAGCAAT+GGG + chr8_3:64670079-64670098 Msa1302180:CDS 30.0%
AAAGCCTAAAACCATTCTAA+CGG + chr8_3:64670108-64670127 Msa1302180:CDS 30.0%
GGGTATTTCTTTAGTTATGT+CGG + chr8_3:64670153-64670172 Msa1302180:CDS 30.0%
ATATAAGACAAAACGCTCTA+AGG + chr8_3:64670203-64670222 Msa1302180:CDS 30.0%
! GCTTACTCTTTTGATATAGA+TGG - chr8_3:64670237-64670256 None:intergenic 30.0%
!! ACTTGTTGAGCATAATGTTT+TGG + chr8_3:64670333-64670352 Msa1302180:CDS 30.0%
!!! ATAATGTTTTGGAAGGTTCA+TGG + chr8_3:64670344-64670363 Msa1302180:intron 30.0%
ACCTAGATTGAAAATGAAGA+AGG + chr8_3:64670595-64670614 Msa1302180:intron 30.0%
!! GGAATTCCTCAATATTTTTG+GGG - chr8_3:64670654-64670673 None:intergenic 30.0%
AAATATTGAGGAATTCCAAG+AGG + chr8_3:64670657-64670676 Msa1302180:CDS 30.0%
ATATCAAGACACTTGCATAA+AGG + chr8_3:64670690-64670709 Msa1302180:CDS 30.0%
AACACTATATACTAAAGCGA+TGG + chr8_3:64670890-64670909 Msa1302180:CDS 30.0%
GAAGTAATCAAGATTGGAAA+GGG + chr8_3:64670932-64670951 Msa1302180:CDS 30.0%
ATGTCCTCCAATGATTAAAT+TGG + chr8_3:64671008-64671027 Msa1302180:CDS 30.0%
! CATATCTTCAACTATTTTGC+TGG - chr8_3:64671094-64671113 None:intergenic 30.0%
AAATCTTGGATTGAGAAAGA+AGG + chr8_3:64671270-64671289 Msa1302180:CDS 30.0%
! CCTGTGATTTTCTCTTTTTT+TGG - chr8_3:64671323-64671342 None:intergenic 30.0%
CCAAAAAAAGAGAAAATCAC+AGG + chr8_3:64671320-64671339 Msa1302180:CDS 30.0%
CATTGAGAGTAATTGAATTG+AGG - chr8_3:64671462-64671481 None:intergenic 30.0%
CTCAATTCAATTACTCTCAA+TGG + chr8_3:64671460-64671479 Msa1302180:CDS 30.0%
ATCATCAAGCTTCAATTCAA+GGG + chr8_3:64671488-64671507 Msa1302180:CDS 30.0%
!! ACAATCTCTTGTTTGTGTTT+TGG + chr8_3:64671687-64671706 Msa1302180:three_prime_UTR 30.0%
CTGTATGTTTGTATTATGAG+TGG + chr8_3:64671810-64671829 Msa1302180:three_prime_UTR 30.0%
!! ATAGAGATGGGTTTGTTAGA+GGG + chr8_3:64662916-64662935 Msa1302180:intron 35.0%
TCTCTTCACCAAAGTAAATC+TGG - chr8_3:64662954-64662973 None:intergenic 35.0%
TGTGAAATGAATGTTGTGTG+TGG + chr8_3:64662986-64663005 Msa1302180:intron 35.0%
GTGAAATGAATGTTGTGTGT+GGG + chr8_3:64662987-64663006 Msa1302180:intron 35.0%
TGAAATGAATGTTGTGTGTG+GGG + chr8_3:64662988-64663007 Msa1302180:intron 35.0%
AAATCCAACACTGGAAAATG+TGG + chr8_3:64663829-64663848 Msa1302180:intron 35.0%
! AAATCCACATTTTCCAGTGT+TGG - chr8_3:64663836-64663855 None:intergenic 35.0%
GATACACTAACCTTGATTCA+CGG + chr8_3:64664177-64664196 Msa1302180:intron 35.0%
ATACACTAACCTTGATTCAC+GGG + chr8_3:64664178-64664197 Msa1302180:intron 35.0%
CAGAATTAACTCAGATGCAA+AGG + chr8_3:64664337-64664356 Msa1302180:intron 35.0%
CACAATGTAAGAAAGGGATA+AGG + chr8_3:64665131-64665150 Msa1302180:intron 35.0%
AATGTAAGAAAGGGATAAGG+TGG + chr8_3:64665134-64665153 Msa1302180:intron 35.0%
ATGTAAGAAAGGGATAAGGT+GGG + chr8_3:64665135-64665154 Msa1302180:intron 35.0%
CTAAAATGCATGAGAGAAGT+TGG + chr8_3:64665182-64665201 Msa1302180:intron 35.0%
! AGGGTCAAAATTGATTCTAG+AGG - chr8_3:64665588-64665607 None:intergenic 35.0%
! ACAGGGTCAAGATTTTTGAA+TGG + chr8_3:64665655-64665674 Msa1302180:intron 35.0%
ATTATCTTCGTTGATGCCAA+AGG + chr8_3:64666239-64666258 Msa1302180:intron 35.0%
TTATCTTCGTTGATGCCAAA+GGG + chr8_3:64666240-64666259 Msa1302180:intron 35.0%
TTTGCTACTCTTTAACGATC+TGG + chr8_3:64666273-64666292 Msa1302180:intron 35.0%
!!! AAGCATTTTTTCTTCTCACG+TGG - chr8_3:64666424-64666443 None:intergenic 35.0%
GTATATACTAGCGATTAGAC+GGG - chr8_3:64667269-64667288 None:intergenic 35.0%
! TCCTGACACATTTTCATTTG+TGG - chr8_3:64667419-64667438 None:intergenic 35.0%
AGTAGTAAATCCAACCATAG+TGG + chr8_3:64667465-64667484 Msa1302180:intron 35.0%
!! TGACAAATTCTGGAATGGAA+CGG - chr8_3:64667504-64667523 None:intergenic 35.0%
! AGTTCTGACAAATTCTGGAA+TGG - chr8_3:64667509-64667528 None:intergenic 35.0%
!!! GACCCATTTTAGAGTTTTAG+AGG + chr8_3:64667618-64667637 Msa1302180:intron 35.0%
! GGTATGACAGTACAATTTTC+AGG - chr8_3:64667843-64667862 None:intergenic 35.0%
TGTACTGTCATACCATATCT+AGG + chr8_3:64667849-64667868 Msa1302180:intron 35.0%
!! TCATGTTAACTTGTGCTCTA+AGG + chr8_3:64667928-64667947 Msa1302180:intron 35.0%
!! CATGTTAACTTGTGCTCTAA+GGG + chr8_3:64667929-64667948 Msa1302180:intron 35.0%
TCACATTCGATAACACCATT+AGG + chr8_3:64668144-64668163 Msa1302180:intron 35.0%
CACATTCGATAACACCATTA+GGG + chr8_3:64668145-64668164 Msa1302180:intron 35.0%
CTAAAAAGTAGGTCTATGAC+AGG - chr8_3:64668256-64668275 None:intergenic 35.0%
!!! CTGTCATAGACCTACTTTTT+AGG + chr8_3:64668254-64668273 Msa1302180:intron 35.0%
TCAAACTACAGGACAGTAAA+TGG - chr8_3:64668499-64668518 None:intergenic 35.0%
CTTCAATCAGTTCAAACTAC+AGG - chr8_3:64668510-64668529 None:intergenic 35.0%
CGTGGCAAAAACAATTTCAA+TGG + chr8_3:64668533-64668552 Msa1302180:intron 35.0%
! TTTTCTATTTTCCACGGAGA+GGG - chr8_3:64668624-64668643 None:intergenic 35.0%
TTGTCTACCAAAATAGACGA+CGG - chr8_3:64669164-64669183 None:intergenic 35.0%
CTTGAACAAAATGAGGAACA+TGG + chr8_3:64669212-64669231 Msa1302180:CDS 35.0%
TCAAATATCATATCCAAGCG+AGG - chr8_3:64669263-64669282 None:intergenic 35.0%
GGATATGATATTTGAATCCG+AGG + chr8_3:64669268-64669287 Msa1302180:CDS 35.0%
TTTGGTATTCGTCGAGAATA+TGG + chr8_3:64669335-64669354 Msa1302180:CDS 35.0%
TTGGTATTCGTCGAGAATAT+GGG + chr8_3:64669336-64669355 Msa1302180:CDS 35.0%
AGATTCACATGCTACAAAGA+AGG + chr8_3:64669395-64669414 Msa1302180:CDS 35.0%
TCGAAAGATAGGGAAATACA+AGG + chr8_3:64669511-64669530 Msa1302180:CDS 35.0%
ATCATGTGAACATACTCTTC+CGG - chr8_3:64669575-64669594 None:intergenic 35.0%
TTTGCTTCGAACAAAAAGGA+TGG + chr8_3:64669745-64669764 Msa1302180:CDS 35.0%
TCACTAAAGTATGGTGAAGT+GGG + chr8_3:64669770-64669789 Msa1302180:CDS 35.0%
ACCGCATACAAGACAAATAA+GGG + chr8_3:64669947-64669966 Msa1302180:CDS 35.0%
! ACCCTTATTTGTCTTGTATG+CGG - chr8_3:64669951-64669970 None:intergenic 35.0%
! CATCGGCAAACAATCATTTT+TGG + chr8_3:64670007-64670026 Msa1302180:CDS 35.0%
! TGATCCGTTAGAATGGTTTT+AGG - chr8_3:64670115-64670134 None:intergenic 35.0%
! CATTTCATGGATTGTGTACT+TGG + chr8_3:64670179-64670198 Msa1302180:CDS 35.0%
ATGCATAGATCTACATGAAG+AGG + chr8_3:64670279-64670298 Msa1302180:CDS 35.0%
!! GTTGAGCATAATGTTTTGGA+AGG + chr8_3:64670337-64670356 Msa1302180:CDS 35.0%
GATTTAAGGAAAAATGGGCA+TGG + chr8_3:64670384-64670403 Msa1302180:intron 35.0%
! CACTTTAAAAGAGCTGTCAA+TGG + chr8_3:64670524-64670543 Msa1302180:intron 35.0%
! GCCTTCTTCATTTTCAATCT+AGG - chr8_3:64670599-64670618 None:intergenic 35.0%
CTTACACCCCAAAAATATTG+AGG + chr8_3:64670645-64670664 Msa1302180:CDS 35.0%
!! TGCATAAAGGTGTTGAAAGA+AGG + chr8_3:64670703-64670722 Msa1302180:CDS 35.0%
TGTAAAAGAGAGGACAGTTA+TGG + chr8_3:64670753-64670772 Msa1302180:CDS 35.0%
GTAAAAGAGAGGACAGTTAT+GGG + chr8_3:64670754-64670773 Msa1302180:CDS 35.0%
!!! CAAGAAACTTTTAGTTCCGT+AGG - chr8_3:64670784-64670803 None:intergenic 35.0%
!! TAGTCATGCTTTGAAAGTGT+TGG + chr8_3:64670840-64670859 Msa1302180:CDS 35.0%
CGCTTTAGTATATAGTGTTC+AGG - chr8_3:64670889-64670908 None:intergenic 35.0%
GGAAGTAATCAAGATTGGAA+AGG + chr8_3:64670931-64670950 Msa1302180:CDS 35.0%
TGAAATCCCATTTCATGAAG+CGG + chr8_3:64670974-64670993 Msa1302180:CDS 35.0%
TTGGCCAATTTAATCATTGG+AGG - chr8_3:64671015-64671034 None:intergenic 35.0%
CTGTTGGCCAATTTAATCAT+TGG - chr8_3:64671018-64671037 None:intergenic 35.0%
!!! ATGAGATTTTGAAGCTCTGT+TGG - chr8_3:64671034-64671053 None:intergenic 35.0%
TATGTTGGCCAAAAAATGTG+TGG + chr8_3:64671110-64671129 Msa1302180:CDS 35.0%
!!! TTCTCCATCCACACATTTTT+TGG - chr8_3:64671121-64671140 None:intergenic 35.0%
AAAAACTTACCGTTAACGAC+TGG - chr8_3:64671350-64671369 None:intergenic 35.0%
GTAATTGAATTGAGGTCAAG+TGG - chr8_3:64671454-64671473 None:intergenic 35.0%
CATCATCAAGCTTCAATTCA+AGG + chr8_3:64671487-64671506 Msa1302180:CDS 35.0%
TATGTCAAACTGCAATCCAA+GGG + chr8_3:64671542-64671561 Msa1302180:CDS 35.0%
!! CAATCAAGCGAAGTTGATAA+TGG + chr8_3:64671568-64671587 Msa1302180:CDS 35.0%
AATGTCAAGCTACAATCCAA+GGG + chr8_3:64671596-64671615 Msa1302180:CDS 35.0%
AATGGGATTTGAAGAGGAGA+TGG + chr8_3:64662748-64662767 Msa1302180:CDS 40.0%
! TATCTCTACGGCCATCTTTT+CGG - chr8_3:64662832-64662851 None:intergenic 40.0%
TGAAAAGGAGAGGATAGAGA+TGG + chr8_3:64662903-64662922 Msa1302180:intron 40.0%
GAAAAGGAGAGGATAGAGAT+GGG + chr8_3:64662904-64662923 Msa1302180:intron 40.0%
!! GATAGAGATGGGTTTGTTAG+AGG + chr8_3:64662915-64662934 Msa1302180:intron 40.0%
GTGAAATACATGGGAGAAGT+GGG + chr8_3:64664492-64664511 Msa1302180:intron 40.0%
! TTTGAAATGCATGGGAGAAG+CGG + chr8_3:64664587-64664606 Msa1302180:intron 40.0%
GCAAAATGAACTCATCCCTT+TGG - chr8_3:64666258-64666277 None:intergenic 40.0%
!!! GCACTAGTTTTTTGAATGGG+AGG + chr8_3:64666335-64666354 Msa1302180:intron 40.0%
TGCTTAGTTGCAATCATAGG+CGG + chr8_3:64666439-64666458 Msa1302180:intron 40.0%
TTCAAACATTCACCGCAAAG+AGG + chr8_3:64666649-64666668 Msa1302180:intron 40.0%
CATTTGTGGCAGTTATACCA+CGG - chr8_3:64667405-64667424 None:intergenic 40.0%
GCCACAAATGAAAATGTGTC+AGG + chr8_3:64667415-64667434 Msa1302180:intron 40.0%
GTCAGGAAACCTCTGATATT+TGG + chr8_3:64667432-64667451 Msa1302180:intron 40.0%
! GCTTTGTTGCCAAATATCAG+AGG - chr8_3:64667444-64667463 None:intergenic 40.0%
TAATGCATTGCCACTATGGT+TGG - chr8_3:64667478-64667497 None:intergenic 40.0%
!!! AGAGTTTTAGAGGAGTGGTA+TGG + chr8_3:64667628-64667647 Msa1302180:intron 40.0%
TCCCATTTATACCACCCATT+TGG + chr8_3:64667721-64667740 Msa1302180:intron 40.0%
CCCAAATGGGTGGTATAAAT+GGG - chr8_3:64667725-64667744 None:intergenic 40.0%
CCCATTTATACCACCCATTT+GGG + chr8_3:64667722-64667741 Msa1302180:intron 40.0%
ACCCAAATGGGTGGTATAAA+TGG - chr8_3:64667726-64667745 None:intergenic 40.0%
ATTTATACCACCCATTTGGG+TGG + chr8_3:64667725-64667744 Msa1302180:intron 40.0%
! ATTGATGGTAATTCCTCGGA+AGG + chr8_3:64667809-64667828 Msa1302180:intron 40.0%
TTCGATAACACCATTAGGGA+TGG + chr8_3:64668149-64668168 Msa1302180:intron 40.0%
TCGATAACACCATTAGGGAT+GGG + chr8_3:64668150-64668169 Msa1302180:intron 40.0%
TTGAACTGATTGAAGACACG+TGG + chr8_3:64668515-64668534 Msa1302180:intron 40.0%
! GTTTTCTATTTTCCACGGAG+AGG - chr8_3:64668625-64668644 None:intergenic 40.0%
! AATGTGTGGTGCTAAGTTTG+AGG - chr8_3:64668719-64668738 None:intergenic 40.0%
GAAAGCTTGTAACAGTGTCA+CGG - chr8_3:64668817-64668836 None:intergenic 40.0%
CATTTGGCATGGAACACAAA+GGG - chr8_3:64668932-64668951 None:intergenic 40.0%
AACAGTACTACCATTTGGCA+TGG - chr8_3:64668943-64668962 None:intergenic 40.0%
! CATGAATCCGTCGTCTATTT+TGG + chr8_3:64669154-64669173 Msa1302180:CDS 40.0%
GCATGAATATATGTCCAAGC+AGG + chr8_3:64669676-64669695 Msa1302180:CDS 40.0%
GAATATATGTCCAAGCAGGT+TGG + chr8_3:64669680-64669699 Msa1302180:CDS 40.0%
! AGGATGGACTCACTAAAGTA+TGG + chr8_3:64669761-64669780 Msa1302180:CDS 40.0%
CTCACTAAAGTATGGTGAAG+TGG + chr8_3:64669769-64669788 Msa1302180:CDS 40.0%
CACCGCATACAAGACAAATA+AGG + chr8_3:64669946-64669965 Msa1302180:CDS 40.0%
AGTCCAACAAATACTCCCAA+CGG - chr8_3:64669980-64669999 None:intergenic 40.0%
! ACTTTTCTCAAAGCAATGGG+TGG + chr8_3:64670082-64670101 Msa1302180:CDS 40.0%
AGCATCTTGATCCGTTAGAA+TGG - chr8_3:64670122-64670141 None:intergenic 40.0%
GTTATGTCGGAGACATTTCA+TGG + chr8_3:64670166-64670185 Msa1302180:CDS 40.0%
AATGGGCATGGACTTATGTT+CGG + chr8_3:64670396-64670415 Msa1302180:intron 40.0%
AAAGAGCTGTCAATGGTAAG+CGG + chr8_3:64670531-64670550 Msa1302180:intron 40.0%
!!! TTTTGGGGTGTAAGCATTTC+CGG - chr8_3:64670639-64670658 None:intergenic 40.0%
GATATTCCTCGTATTCCTCT+TGG - chr8_3:64670675-64670694 None:intergenic 40.0%
GACAGTTATGGGAAATCCTA+CGG + chr8_3:64670765-64670784 Msa1302180:CDS 40.0%
GGTTGGGAAGTAATCAAGAT+TGG + chr8_3:64670926-64670945 Msa1302180:CDS 40.0%
ACTGTACCGCTTCATGAAAT+GGG - chr8_3:64670983-64671002 None:intergenic 40.0%
GCTGGACTCTTCATAAACTT+TGG - chr8_3:64671076-64671095 None:intergenic 40.0%
TTGGCCAAAAAATGTGTGGA+TGG + chr8_3:64671114-64671133 Msa1302180:CDS 40.0%
AGAATCAAGTGGAATGGTTC+AGG + chr8_3:64671137-64671156 Msa1302180:CDS 40.0%
TAAAGAGAAAGAAGCCAGCA+TGG + chr8_3:64671182-64671201 Msa1302180:CDS 40.0%
! TATGCCTTTTGCCTTGACAA+CGG - chr8_3:64671211-64671230 None:intergenic 40.0%
ACAGGAAAACCAGTCGTTAA+CGG + chr8_3:64671338-64671357 Msa1302180:CDS 40.0%
CTATGTCAAACTGCAATCCA+AGG + chr8_3:64671541-64671560 Msa1302180:CDS 40.0%
CAATGTCAAGCTACAATCCA+AGG + chr8_3:64671595-64671614 Msa1302180:CDS 40.0%
ATGTCAAGCTACAATCCAAG+GGG + chr8_3:64671597-64671616 Msa1302180:CDS 40.0%
CAAGATCGGACTACCTTTGT+CGG - chr8_3:64662720-64662739 None:intergenic 45.0%
GAGATGGAGGAGACTCTTTA+TGG + chr8_3:64662764-64662783 Msa1302180:CDS 45.0%
GAGGAGACTCTTTATGGTGA+AGG + chr8_3:64662770-64662789 Msa1302180:CDS 45.0%
TCGAGATCTTGCCGAAAAGA+TGG + chr8_3:64662818-64662837 Msa1302180:intron 45.0%
!! AGATGGGTTTGTTAGAGGGT+GGG + chr8_3:64662920-64662939 Msa1302180:intron 45.0%
CTAAGGTTAGTGAACCGAGA+GGG + chr8_3:64663070-64663089 Msa1302180:intron 45.0%
TAAGGTTAGTGAACCGAGAG+GGG + chr8_3:64663071-64663090 Msa1302180:intron 45.0%
ACAACTTGTCCCGTGAATCA+AGG - chr8_3:64664190-64664209 None:intergenic 45.0%
GGTGAAATACATGGGAGAAG+TGG + chr8_3:64664491-64664510 Msa1302180:intron 45.0%
TAAAAATCGTCCACCCCAAC+AGG + chr8_3:64666158-64666177 Msa1302180:intron 45.0%
AAAATACCCGTGCGTTAGCA+CGG - chr8_3:64666187-64666206 None:intergenic 45.0%
TCACTATTGCAACTAGGGTG+TGG - chr8_3:64667347-64667366 None:intergenic 45.0%
! GTGGTAATGCATTGCCACTA+TGG - chr8_3:64667482-64667501 None:intergenic 45.0%
!! CAAATTCTGGAATGGAACGG+TGG - chr8_3:64667501-64667520 None:intergenic 45.0%
TAGGCTATTCCCATCCCTAA+TGG - chr8_3:64668162-64668181 None:intergenic 45.0%
ATTAGGGATGGGAATAGCCT+AGG + chr8_3:64668161-64668180 Msa1302180:intron 45.0%
AAATATGGCAGGTCAGGCTT+AGG - chr8_3:64668207-64668226 None:intergenic 45.0%
TATCAGGCTTTCAGAAGGTC+GGG - chr8_3:64668286-64668305 None:intergenic 45.0%
GTATCAGGCTTTCAGAAGGT+CGG - chr8_3:64668287-64668306 None:intergenic 45.0%
! GACCTTCTGAAAGCCTGATA+CGG + chr8_3:64668286-64668305 Msa1302180:intron 45.0%
CCATTTGGCATGGAACACAA+AGG - chr8_3:64668933-64668952 None:intergenic 45.0%
CCTTTGTGTTCCATGCCAAA+TGG + chr8_3:64668930-64668949 Msa1302180:intron 45.0%
ATCCAAGCGAGGTTTGATGT+CGG - chr8_3:64669252-64669271 None:intergenic 45.0%
ACAAAAGACGTCAACCGACT+GGG + chr8_3:64669432-64669451 Msa1302180:CDS 45.0%
TCTACGGCAGAAACTAGAAC+CGG + chr8_3:64669458-64669477 Msa1302180:CDS 45.0%
! TATATGTCCAAGCAGGTTGG+TGG + chr8_3:64669683-64669702 Msa1302180:CDS 45.0%
!! ATATGTCCAAGCAGGTTGGT+GGG + chr8_3:64669684-64669703 Msa1302180:CDS 45.0%
AAATAAGGGTTATCGGCCGT+TGG + chr8_3:64669961-64669980 Msa1302180:CDS 45.0%
AATAAGGGTTATCGGCCGTT+GGG + chr8_3:64669962-64669981 Msa1302180:CDS 45.0%
GTTCGGAAAACATTCACTGC+AGG + chr8_3:64670413-64670432 Msa1302180:intron 45.0%
GGAATTCCAAGAGGAATACG+AGG + chr8_3:64670666-64670685 Msa1302180:CDS 45.0%
ACTAAAGCGATGGACAAGAG+AGG + chr8_3:64670900-64670919 Msa1302180:CDS 45.0%
CACTGTACCGCTTCATGAAA+TGG - chr8_3:64670984-64671003 None:intergenic 45.0%
TGTGTGGATGGAGAATCAAG+TGG + chr8_3:64671126-64671145 Msa1302180:CDS 45.0%
GGATGGAGAATCAAGTGGAA+TGG + chr8_3:64671131-64671150 Msa1302180:CDS 45.0%
GTTCAGGTAACCGTATCACT+TGG + chr8_3:64671153-64671172 Msa1302180:CDS 45.0%
GAAACCGTTGTCAAGGCAAA+AGG + chr8_3:64671204-64671223 Msa1302180:CDS 45.0%
TTTGTCTTCATTGTGCCCCT+TGG - chr8_3:64671615-64671634 None:intergenic 45.0%
GGTTTCGCAACTCCTTTAAC+TGG + chr8_3:64671708-64671727 Msa1302180:three_prime_UTR 45.0%
!!! TTTTAATTACATTTTTTATA+AGG + chr8_3:64663993-64664012 Msa1302180:intron 5.0%
!!! TTTTTATTACATTTTTTATA+AGG + chr8_3:64664096-64664115 Msa1302180:intron 5.0%
!! TTTATAATAATTATAATACT+CGG + chr8_3:64665406-64665425 Msa1302180:intron 5.0%
!!! ATAAATTTTAGAATAATTTA+AGG + chr8_3:64665446-64665465 Msa1302180:intron 5.0%
!!! TAAATTTTAGAATAATTTAA+GGG + chr8_3:64665447-64665466 Msa1302180:intron 5.0%
!! TATAAATTTAAAAAAAAACA+CGG + chr8_3:64665861-64665880 Msa1302180:intron 5.0%
!!! ATTTTTTTATTTTTTTAAGT+GGG - chr8_3:64666536-64666555 None:intergenic 5.0%
!!! TATATAAGTATAATATTTTT+AGG + chr8_3:64667064-64667083 Msa1302180:intron 5.0%
GGGATTTGAAGAGGAGATGG+AGG + chr8_3:64662751-64662770 Msa1302180:CDS 50.0%
!! GAGATGGGTTTGTTAGAGGG+TGG + chr8_3:64662919-64662938 Msa1302180:intron 50.0%
CCTCTCGGTTCACTAACCTT+AGG - chr8_3:64663072-64663091 None:intergenic 50.0%
CCTAAGGTTAGTGAACCGAG+AGG + chr8_3:64663069-64663088 Msa1302180:intron 50.0%
! TAGTGAACCGAGAGGGGTAT+CGG + chr8_3:64663077-64663096 Msa1302180:intron 50.0%
TACATACCCGATACCCCTCT+CGG - chr8_3:64663087-64663106 None:intergenic 50.0%
AAATACCCGTGCGTTAGCAC+GGG - chr8_3:64666186-64666205 None:intergenic 50.0%
ACCAGCGTGATCATGTACAC+AGG + chr8_3:64666391-64666410 Msa1302180:intron 50.0%
ACCTGTGTACATGATCACGC+TGG - chr8_3:64666395-64666414 None:intergenic 50.0%
TTATTTGAGCCCGGATTCGC+CGG - chr8_3:64666474-64666493 None:intergenic 50.0%
CATTCACCGCAAAGAGGTCT+CGG + chr8_3:64666655-64666674 Msa1302180:intron 50.0%
ACCTTTCCGAGACCTCTTTG+CGG - chr8_3:64666664-64666683 None:intergenic 50.0%
!! TTATCGGTGCAAAAGCACCG+TGG + chr8_3:64667385-64667404 Msa1302180:intron 50.0%
CACATCCATGCCACCCAAAT+GGG - chr8_3:64667738-64667757 None:intergenic 50.0%
CATTTGGGTGGCATGGATGT+GGG + chr8_3:64667737-64667756 Msa1302180:intron 50.0%
! TCAGGCTTTTACTCCTTCCG+AGG - chr8_3:64667825-64667844 None:intergenic 50.0%
AGGCCTTGCAAAGCCTAGTT+CGG - chr8_3:64668187-64668206 None:intergenic 50.0%
TAAAGCCTAAGTCTGGCCTG+CGG + chr8_3:64668230-64668249 Msa1302180:intron 50.0%
GACCGTATCAGGCTTTCAGA+AGG - chr8_3:64668291-64668310 None:intergenic 50.0%
ACAGGCTAGTAGACCGTATC+AGG - chr8_3:64668302-64668321 None:intergenic 50.0%
!!! CGTGTTTTGTTTCGACGGAG+AGG - chr8_3:64668660-64668679 None:intergenic 50.0%
!!! CGCAGCGTGTTTTGTTTCGA+CGG - chr8_3:64668665-64668684 None:intergenic 50.0%
CGTCGAAACAAAACACGCTG+CGG + chr8_3:64668663-64668682 Msa1302180:intron 50.0%
GCAGAGTAGTGGTGAATGTG+TGG - chr8_3:64668733-64668752 None:intergenic 50.0%
AGCTTGTAACAGTGTCACGG+CGG - chr8_3:64668814-64668833 None:intergenic 50.0%
GACAAAAGACGTCAACCGAC+TGG + chr8_3:64669431-64669450 Msa1302180:CDS 50.0%
CAAAAGACGTCAACCGACTG+GGG + chr8_3:64669433-64669452 Msa1302180:CDS 50.0%
CTACGGCAGAAACTAGAACC+GGG + chr8_3:64669459-64669478 Msa1302180:CDS 50.0%
AACCGGGTGTAATGCACGTA+TGG + chr8_3:64669475-64669494 Msa1302180:CDS 50.0%
ACCGGGTGTAATGCACGTAT+GGG + chr8_3:64669476-64669495 Msa1302180:CDS 50.0%
ACCCATACGTGCATTACACC+CGG - chr8_3:64669480-64669499 None:intergenic 50.0%
ACACAACCACCTTCTTCAGC+CGG + chr8_3:64669553-64669572 Msa1302180:CDS 50.0%
CATACTCTTCCGGCTGAAGA+AGG - chr8_3:64669565-64669584 None:intergenic 50.0%
CTCTCATCGTCGCATATCTG+AGG + chr8_3:64669598-64669617 Msa1302180:CDS 50.0%
! GTTGGTGGGATAGAGATGGT+TGG + chr8_3:64669698-64669717 Msa1302180:CDS 50.0%
AACGGATCAAGATGCTGCGA+TGG + chr8_3:64670126-64670145 Msa1302180:CDS 50.0%
TCAAGATGCTGCGATGGCAA+AGG + chr8_3:64670132-64670151 Msa1302180:CDS 50.0%
CAAGATGCTGCGATGGCAAA+GGG + chr8_3:64670133-64670152 Msa1302180:CDS 50.0%
ATGGACAAGAGAGGCAAGGT+TGG + chr8_3:64670909-64670928 Msa1302180:CDS 50.0%
TGGACAAGAGAGGCAAGGTT+GGG + chr8_3:64670910-64670929 Msa1302180:CDS 50.0%
CTTGACAACGGTTTCCATGC+TGG - chr8_3:64671199-64671218 None:intergenic 50.0%
CAGCATGGAAACCGTTGTCA+AGG + chr8_3:64671197-64671216 Msa1302180:CDS 50.0%
CTTCGCTTGATTGTGTCCCT+TGG - chr8_3:64671561-64671580 None:intergenic 50.0%
!! AGTGAACCGAGAGGGGTATC+GGG + chr8_3:64663078-64663097 Msa1302180:intron 55.0%
TGCATGGGAGAAGCGGACAT+TGG + chr8_3:64664594-64664613 Msa1302180:intron 55.0%
GTTAGCACGGGTACCTGTTG+GGG - chr8_3:64666174-64666193 None:intergenic 55.0%
CGTTAGCACGGGTACCTGTT+GGG - chr8_3:64666175-64666194 None:intergenic 55.0%
TCATAGGCGGAGACACCATC+CGG + chr8_3:64666452-64666471 Msa1302180:intron 55.0%
ACCGCAAAGAGGTCTCGGAA+AGG + chr8_3:64666660-64666679 Msa1302180:intron 55.0%
TACCACCCATTTGGGTGGCA+TGG + chr8_3:64667730-64667749 Msa1302180:intron 55.0%
ATCCATGCCACCCAAATGGG+TGG - chr8_3:64667735-64667754 None:intergenic 55.0%
CCACATCCATGCCACCCAAA+TGG - chr8_3:64667739-64667758 None:intergenic 55.0%
CCATTTGGGTGGCATGGATG+TGG + chr8_3:64667736-64667755 Msa1302180:intron 55.0%
GGAATAGCCTAGGCCGAACT+AGG + chr8_3:64668171-64668190 Msa1302180:intron 55.0%
TGCAAAGCCTAGTTCGGCCT+AGG - chr8_3:64668181-64668200 None:intergenic 55.0%
AGGCCGAACTAGGCTTTGCA+AGG + chr8_3:64668181-64668200 Msa1302180:intron 55.0%
CGGGCTCAGGCCTAAAAAGT+AGG - chr8_3:64668267-64668286 None:intergenic 55.0%
ATTGCTCTTCTCCCTCTCCG+TGG + chr8_3:64668610-64668629 Msa1302180:intron 55.0%
AAGTTACGACAGCACAGCGG+CGG - chr8_3:64668762-64668781 None:intergenic 55.0%
GGGAAGTTACGACAGCACAG+CGG - chr8_3:64668765-64668784 None:intergenic 55.0%
TGCCGACATCAAACCTCGCT+TGG + chr8_3:64669247-64669266 Msa1302180:CDS 55.0%
TCAACCGACTGGGGAGTCTA+CGG + chr8_3:64669442-64669461 Msa1302180:CDS 55.0%
ACTCTTCCGGCTGAAGAAGG+TGG - chr8_3:64669562-64669581 None:intergenic 55.0%
CTCTATCCCACCAACCTGCT+TGG - chr8_3:64669693-64669712 None:intergenic 55.0%
!! GCAGGTTGGTGGGATAGAGA+TGG + chr8_3:64669694-64669713 Msa1302180:CDS 55.0%
!! CGGCCGTTGGGAGTATTTGT+TGG + chr8_3:64669974-64669993 Msa1302180:CDS 55.0%
GGGTGTAAGCATTTCCGGCT+TGG - chr8_3:64670634-64670653 None:intergenic 55.0%
AGCGATGGACAAGAGAGGCA+AGG + chr8_3:64670905-64670924 Msa1302180:CDS 55.0%
GCGTTAGCACGGGTACCTGT+TGG - chr8_3:64666176-64666195 None:intergenic 60.0%
CAGGTACCCGTGCTAACGCA+CGG + chr8_3:64666177-64666196 Msa1302180:intron 60.0%
AGGTACCCGTGCTAACGCAC+GGG + chr8_3:64666178-64666197 Msa1302180:intron 60.0%
GAGACACCATCCGGCGAATC+CGG + chr8_3:64666461-64666480 Msa1302180:intron 60.0%
AGACACCATCCGGCGAATCC+GGG + chr8_3:64666462-64666481 Msa1302180:intron 60.0%
GTAGGTCTATGACAGGCCGC+AGG - chr8_3:64668249-64668268 None:intergenic 60.0%
GCTTTCAGAAGGTCGGGCTC+AGG - chr8_3:64668280-64668299 None:intergenic 60.0%
TCTGCCGTAGACTCCCCAGT+CGG - chr8_3:64669449-64669468 None:intergenic 60.0%
GCTCGAATGCTCGTCCAAGC+CGG + chr8_3:64670617-64670636 Msa1302180:CDS 60.0%
GGCGCGGTGGTTGCAAACTC+CGG + chr8_3:64662683-64662702 Msa1302180:CDS 65.0%
GGTGGTTGCAAACTCCGGCG+CGG + chr8_3:64662688-64662707 Msa1302180:CDS 65.0%
TTTGTCGGTGACCACCGCGC+CGG - chr8_3:64662705-64662724 None:intergenic 65.0%
AGCACGGGTACCTGTTGGGG+TGG - chr8_3:64666171-64666190 None:intergenic 65.0%
TTGAGCCCGGATTCGCCGGA+TGG - chr8_3:64666470-64666489 None:intergenic 65.0%
ACAGGCCGCAGGCCAGACTT+AGG - chr8_3:64668238-64668257 None:intergenic 65.0%
GGCGGAGTAGGGCAGAGTAG+TGG - chr8_3:64668744-64668763 None:intergenic 65.0%
GACAGCACAGCGGCGGAGTA+GGG - chr8_3:64668755-64668774 None:intergenic 65.0%
GGTTGCAAACTCCGGCGCGG+TGG + chr8_3:64662691-64662710 Msa1302180:CDS 70.0%
GGCGCGGTGGTCACCGACAA+AGG + chr8_3:64662704-64662723 Msa1302180:CDS 70.0%
CGACAGCACAGCGGCGGAGT+AGG - chr8_3:64668756-64668775 None:intergenic 70.0%
CGCGCAGTTGCGACAGCGGT+GGG - chr8_3:64668785-64668804 None:intergenic 70.0%
GCAGCGCGCAGTTGCGACAG+CGG - chr8_3:64668789-64668808 None:intergenic 70.0%
GCTGTCGCAACTGCGCGCTG+CGG + chr8_3:64668788-64668807 Msa1302180:intron 70.0%
GCGCGCAGTTGCGACAGCGG+TGG - chr8_3:64668786-64668805 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 64662671 64671888 64662671 ID=Msa1302180;Name=Msa1302180
chr8_3 mRNA 64662671 64671888 64662671 ID=Msa1302180-mRNA-1;Parent=Msa1302180;Name=Msa1302180-mRNA-1;_AED=0.27;_eAED=0.35;_QI=0|0.33|0.25|0.75|1|1|4|261|751
chr8_3 exon 64662671 64662791 64662671 ID=Msa1302180-mRNA-1:exon:19502;Parent=Msa1302180-mRNA-1
chr8_3 exon 64669150 64670358 64669150 ID=Msa1302180-mRNA-1:exon:19503;Parent=Msa1302180-mRNA-1
chr8_3 exon 64670614 64671359 64670614 ID=Msa1302180-mRNA-1:exon:19504;Parent=Msa1302180-mRNA-1
chr8_3 exon 64671448 64671888 64671448 ID=Msa1302180-mRNA-1:exon:19505;Parent=Msa1302180-mRNA-1
chr8_3 CDS 64662671 64662791 64662671 ID=Msa1302180-mRNA-1:cds;Parent=Msa1302180-mRNA-1
chr8_3 CDS 64669150 64670358 64669150 ID=Msa1302180-mRNA-1:cds;Parent=Msa1302180-mRNA-1
chr8_3 CDS 64670614 64671359 64670614 ID=Msa1302180-mRNA-1:cds;Parent=Msa1302180-mRNA-1
chr8_3 CDS 64671448 64671627 64671448 ID=Msa1302180-mRNA-1:cds;Parent=Msa1302180-mRNA-1
chr8_3 three_prime_UTR 64671628 64671888 64671628 ID=Msa1302180-mRNA-1:three_prime_utr;Parent=Msa1302180-mRNA-1
Gene Sequence

>Msa1302180

ATGTTCTTTTCTGGCGCGGTGGTTGCAAACTCCGGCGCGGTGGTCACCGACAAAGGTAGTCCGATCTTGATTTTTTTAATGGGATTTGAAGAGGAGATGGAGGAGACTCTTTATGGTGAAGAAAGCATGAATCCGTCGTCTATTTTGGTAGACAATTCTGTTGATAAATTGGTAAACAATATTCTTGAACAAAATGAGGAACATGGAAAAGAAAGTATTGCCGACATCAAACCTCGCTTGGATATGATATTTGAATCCGAGGTAGATGCTTATGAATTTTATAATGAGTATAGTAAAAGAATTGGATTTGGTATTCGTCGAGAATATGGGAATAAAAGCAAAAAAGACGGGGTTTTAACTTCAAGAAGATTCACATGCTACAAAGAAGGTACACGAAGTGTTGACAAAAGACGTCAACCGACTGGGGAGTCTACGGCAGAAACTAGAACCGGGTGTAATGCACGTATGGGTATTTCACTTGATCGAAAGATAGGGAAATACAAGGTTGTTGACTTTGTACTAGAACACAACCACCTTCTTCAGCCGGAAGAGTATGTTCACATGATTCGCTCTCATCGTCGCATATCTGAGGCACAAGCATCACAAATTATAATGGGAGATGAATCTGGATTAAGACCAAAAGATTTGCATGAATATATGTCCAAGCAGGTTGGTGGGATAGAGATGGTTGGTTTTACAAGAACAGACGTTAAGAATTTGCTTCGAACAAAAAGGATGGACTCACTAAAGTATGGTGAAGTGGGTGCATTGATGACTTATTTTAAACAAGAAAGCGAAAATCCATCTTTCTTTTATGACTTTCAAATGGATGTTGAAGAGCAAATAACAAACATATTTTGGGCAGATGCACAAATGATCAATGATTATGGGTACTTTGGTGATGTCATCACTTTTGACACCGCATACAAGACAAATAAGGGTTATCGGCCGTTGGGAGTATTTGTTGGACTTAATAATCATCGGCAAACAATCATTTTTGGTGCAACATTGTTATATGATGAAACAATACCTTCTTTTCAGTGGTTATTTGAAACTTTTCTCAAAGCAATGGGTGGAAAAAAGCCTAAAACCATTCTAACGGATCAAGATGCTGCGATGGCAAAGGGTATTTCTTTAGTTATGTCGGAGACATTTCATGGATTGTGTACTTGGCATATAAGACAAAACGCTCTAAGGCATGTGAACCATCTATATCAAAAGAGTAAGCACTTTTCTTCAGATTTTGAAGCATGCATAGATCTACATGAAGAGGAAGATGAATTTTTGAATGCATGGAACTCTTTACTTGTTGAGCATAATGTTTTGGAAGAAGGCTCGAATGCTCGTCCAAGCCGGAAATGCTTACACCCCAAAAATATTGAGGAATTCCAAGAGGAATACGAGGAATATCAAGACACTTGCATAAAGGTGTTGAAAGAAGGTTTGTATGCTGTCACAAATTATGATAATGTAAAAGAGAGGACAGTTATGGGAAATCCTACGGAACTAAAAGTTTCTTGTGATTGTCGTAAATTTGAGACACACGACATCTTATGTAGTCATGCTTTGAAAGTGTTGGATGTCATGAATATTAAGTTAATTCCTGAACACTATATACTAAAGCGATGGACAAGAGAGGCAAGGTTGGGAAGTAATCAAGATTGGAAAGGGATGCATGTTGAACTAGACATGAAATCCCATTTCATGAAGCGGTACAGTGAGTTATGTCCTCCAATGATTAAATTGGCCAACAGAGCTTCAAAATCTCATGCAACTTACACTTTTTTGTCCAAAGTTTATGAAGAGTCCAGCAAAATAGTTGAAGATATGTTGGCCAAAAAATGTGTGGATGGAGAATCAAGTGGAATGGTTCAGGTAACCGTATCACTTGGAAATGATAAAGAGAAAGAAGCCAGCATGGAAACCGTTGTCAAGGCAAAAGGCATAAAGAAGCGAGATTGTTCACGTTCCACTAAAAAACGAGTTAAATCTTGGATTGAGAAAGAAGGTAAAAAGAGAAACAAATACATTCAGTCCCAAAAAAAGAGAAAATCACAGGAAAACCAGTCGTTAACGCAACCACTTGACCTCAATTCAATTACTCTCAATGGAACTCATCATCAAGCTTCAATTCAAGGGACACAATCAAGTCAAGCTGACAATGTAATTCTATGTCAAACTGCAATCCAAGGGACACAATCAAGCGAAGTTGATAATGGAGCTCAATGTCAAGCTACAATCCAAGGGGCACAATGA
Protein sequence

>Msa1302180

MFFSGAVVANSGAVVTDKGSPILIFLMGFEEEMEETLYGEESMNPSSILVDNSVDKLVNNILEQNEEHGKESIADIKPRLDMIFESEVDAYEFYNEYSKRIGFGIRREYGNKSKKDGVLTSRRFTCYKEGTRSVDKRRQPTGESTAETRTGCNARMGISLDRKIGKYKVVDFVLEHNHLLQPEEYVHMIRSHRRISEAQASQIIMGDESGLRPKDLHEYMSKQVGGIEMVGFTRTDVKNLLRTKRMDSLKYGEVGALMTYFKQESENPSFFYDFQMDVEEQITNIFWADAQMINDYGYFGDVITFDTAYKTNKGYRPLGVFVGLNNHRQTIIFGATLLYDETIPSFQWLFETFLKAMGGKKPKTILTDQDAAMAKGISLVMSETFHGLCTWHIRQNALRHVNHLYQKSKHFSSDFEACIDLHEEEDEFLNAWNSLLVEHNVLEEGSNARPSRKCLHPKNIEEFQEEYEEYQDTCIKVLKEGLYAVTNYDNVKERTVMGNPTELKVSCDCRKFETHDILCSHALKVLDVMNIKLIPEHYILKRWTREARLGSNQDWKGMHVELDMKSHFMKRYSELCPPMIKLANRASKSHATYTFLSKVYEESSKIVEDMLAKKCVDGESSGMVQVTVSLGNDKEKEASMETVVKAKGIKKRDCSRSTKKRVKSWIEKEGKKRNKYIQSQKKRKSQENQSLTQPLDLNSITLNGTHHQASIQGTQSSQADNVILCQTAIQGTQSSEVDNGAQCQATIQGAQ*