Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1302360 | XP_043708735.1 | 73.836 | 451 | 94 | 5 | 1 | 428 | 1 | 450 | 0.0 | 647 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1302360 | sp|Q9ZVM9|Y1461_ARATH | 55.109 | 274 | 112 | 4 | 162 | 428 | 290 | 559 | 4.30e-93 | 295 |
Msa1302360 | sp|Q9ZVM9|Y1461_ARATH | 61.304 | 230 | 59 | 4 | 1 | 206 | 1 | 224 | 2.39e-84 | 272 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1302360 | A0A498HKP6 | 68.704 | 409 | 111 | 5 | 21 | 423 | 8 | 405 | 0.0 | 552 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
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Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1302360 | MtrunA17_Chr4g0066691 | 96.371 | 248 | 8 | 1 | 199 | 446 | 309 | 555 | 6.28e-173 | 496 |
Msa1302360 | MtrunA17_Chr4g0066691 | 91.080 | 213 | 14 | 2 | 1 | 208 | 1 | 213 | 8.59e-111 | 337 |
Msa1302360 | MtrunA17_Chr2g0286421 | 76.639 | 244 | 56 | 1 | 185 | 427 | 293 | 536 | 8.17e-128 | 380 |
Msa1302360 | MtrunA17_Chr2g0286421 | 72.770 | 213 | 51 | 3 | 1 | 208 | 1 | 211 | 2.04e-99 | 307 |
Msa1302360 | MtrunA17_Chr7g0273601 | 63.675 | 234 | 84 | 1 | 199 | 431 | 312 | 545 | 7.19e-102 | 315 |
Msa1302360 | MtrunA17_Chr7g0273601 | 63.333 | 210 | 68 | 2 | 1 | 202 | 1 | 209 | 1.41e-85 | 272 |
Msa1302360 | MtrunA17_Chr3g0131861 | 67.727 | 220 | 68 | 3 | 185 | 402 | 288 | 506 | 2.54e-94 | 295 |
Msa1302360 | MtrunA17_Chr3g0131861 | 80.916 | 131 | 25 | 0 | 76 | 206 | 73 | 203 | 8.97e-66 | 220 |
Msa1302360 | MtrunA17_Chr8g0385971 | 60.082 | 243 | 85 | 6 | 199 | 437 | 295 | 529 | 1.85e-85 | 272 |
Msa1302360 | MtrunA17_Chr8g0385971 | 53.589 | 209 | 81 | 4 | 1 | 206 | 1 | 196 | 2.71e-58 | 200 |
Msa1302360 | MtrunA17_Chr1g0191221 | 61.905 | 231 | 87 | 1 | 199 | 428 | 327 | 557 | 2.81e-84 | 270 |
Msa1302360 | MtrunA17_Chr1g0191221 | 61.207 | 232 | 65 | 5 | 1 | 208 | 1 | 231 | 5.16e-81 | 261 |
Msa1302360 | MtrunA17_Chr2g0317501 | 67.630 | 173 | 52 | 1 | 45 | 213 | 79 | 251 | 1.57e-71 | 239 |
Msa1302360 | MtrunA17_Chr2g0317501 | 52.821 | 195 | 89 | 2 | 185 | 379 | 325 | 516 | 1.70e-58 | 204 |
Msa1302360 | MtrunA17_Chr4g0061141 | 70.629 | 143 | 42 | 0 | 60 | 202 | 65 | 207 | 2.21e-66 | 224 |
Msa1302360 | MtrunA17_Chr4g0061141 | 55.814 | 129 | 54 | 2 | 199 | 327 | 310 | 435 | 4.63e-41 | 155 |
Msa1302360 | MtrunA17_Chr2g0324461 | 58.378 | 185 | 72 | 3 | 22 | 202 | 60 | 243 | 2.84e-61 | 211 |
Msa1302360 | MtrunA17_Chr2g0324461 | 41.111 | 180 | 100 | 4 | 199 | 377 | 346 | 520 | 2.06e-39 | 150 |
Msa1302360 | MtrunA17_Chr4g0040141 | 58.480 | 171 | 70 | 1 | 39 | 208 | 68 | 238 | 3.99e-61 | 211 |
Msa1302360 | MtrunA17_Chr4g0040141 | 44.444 | 234 | 115 | 4 | 185 | 416 | 320 | 540 | 4.29e-51 | 183 |
Msa1302360 | MtrunA17_Chr7g0218071 | 68.421 | 133 | 42 | 0 | 70 | 202 | 90 | 222 | 1.99e-60 | 209 |
Msa1302360 | MtrunA17_Chr7g0218071 | 59.292 | 113 | 45 | 1 | 199 | 310 | 325 | 437 | 9.19e-38 | 145 |
Msa1302360 | MtrunA17_Chr5g0396361 | 66.667 | 147 | 47 | 2 | 67 | 212 | 106 | 251 | 1.74e-57 | 199 |
Msa1302360 | MtrunA17_Chr5g0396361 | 50.311 | 161 | 75 | 2 | 185 | 343 | 331 | 488 | 1.80e-42 | 158 |
Msa1302360 | MtrunA17_Chr6g0453711 | 60.140 | 143 | 57 | 0 | 60 | 202 | 70 | 212 | 7.17e-55 | 192 |
Msa1302360 | MtrunA17_Chr6g0453711 | 61.607 | 112 | 43 | 0 | 199 | 310 | 315 | 426 | 4.97e-42 | 157 |
Msa1302360 | MtrunA17_Chr2g0276911 | 50.279 | 179 | 81 | 4 | 201 | 379 | 95 | 265 | 1.73e-50 | 177 |
Msa1302360 | MtrunA17_Chr1g0201571 | 42.786 | 201 | 95 | 5 | 18 | 208 | 45 | 235 | 1.66e-41 | 155 |
Msa1302360 | MtrunA17_Chr1g0201571 | 47.541 | 122 | 54 | 3 | 199 | 313 | 331 | 449 | 4.64e-20 | 92.8 |
Msa1302360 | MtrunA17_Chr8g0383451 | 60.825 | 97 | 38 | 0 | 106 | 202 | 4 | 100 | 3.65e-32 | 127 |
Msa1302360 | MtrunA17_Chr8g0383451 | 50.538 | 93 | 44 | 1 | 199 | 291 | 203 | 293 | 2.01e-15 | 78.2 |
Msa1302360 | MtrunA17_Chr3g0093391 | 45.528 | 123 | 51 | 3 | 95 | 202 | 18 | 139 | 5.91e-24 | 104 |
Msa1302360 | MtrunA17_Chr3g0093391 | 42.727 | 110 | 62 | 1 | 202 | 310 | 245 | 354 | 1.47e-19 | 91.3 |
Msa1302360 | MtrunA17_Chr3g0093571 | 44.715 | 123 | 52 | 3 | 95 | 202 | 20 | 141 | 1.18e-23 | 103 |
Msa1302360 | MtrunA17_Chr3g0093571 | 42.727 | 110 | 62 | 1 | 202 | 310 | 247 | 356 | 3.95e-19 | 89.7 |
Msa1302360 | MtrunA17_Chr8g0377071 | 40.909 | 110 | 65 | 0 | 95 | 204 | 380 | 489 | 1.35e-14 | 76.3 |
Msa1302360 | MtrunA17_Chr1g0194881 | 39.091 | 110 | 66 | 1 | 202 | 310 | 40 | 149 | 1.97e-14 | 73.9 |
Msa1302360 | MtrunA17_Chr3g0122781 | 40.517 | 116 | 67 | 1 | 89 | 204 | 407 | 520 | 2.10e-14 | 75.5 |
Msa1302360 | MtrunA17_Chr4g0051261 | 39.831 | 118 | 63 | 6 | 98 | 212 | 2 | 114 | 5.65e-14 | 72.4 |
Msa1302360 | MtrunA17_Chr2g0293491 | 36.076 | 158 | 87 | 9 | 98 | 250 | 2 | 150 | 8.27e-14 | 72.0 |
Msa1302360 | MtrunA17_Chr3g0099951 | 43.617 | 94 | 49 | 3 | 97 | 188 | 11 | 102 | 7.17e-13 | 70.1 |
Msa1302360 | MtrunA17_Chr4g0057791 | 39.130 | 115 | 66 | 3 | 95 | 206 | 213 | 326 | 8.76e-13 | 70.1 |
Msa1302360 | MtrunA17_Chr6g0483151 | 44.444 | 90 | 46 | 3 | 97 | 185 | 11 | 97 | 2.82e-12 | 68.2 |
Msa1302360 | MtrunA17_Chr1g0187371 | 42.391 | 92 | 49 | 2 | 98 | 185 | 16 | 107 | 2.47e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1302360 | AT1G54610.1 | 55.109 | 274 | 112 | 4 | 162 | 428 | 290 | 559 | 4.37e-94 | 295 |
Msa1302360 | AT1G54610.1 | 61.304 | 230 | 59 | 4 | 1 | 206 | 1 | 224 | 2.43e-85 | 272 |
Msa1302360 | AT1G54610.3 | 55.109 | 274 | 112 | 4 | 162 | 428 | 290 | 559 | 4.37e-94 | 295 |
Msa1302360 | AT1G54610.3 | 61.304 | 230 | 59 | 4 | 1 | 206 | 1 | 224 | 2.43e-85 | 272 |
Msa1302360 | AT1G54610.2 | 55.109 | 274 | 112 | 4 | 162 | 428 | 290 | 559 | 4.37e-94 | 295 |
Msa1302360 | AT1G54610.2 | 61.304 | 230 | 59 | 4 | 1 | 206 | 1 | 224 | 2.43e-85 | 272 |
Msa1302360 | AT5G50860.1 | 49.643 | 280 | 122 | 7 | 162 | 438 | 286 | 549 | 3.21e-80 | 259 |
Msa1302360 | AT5G50860.1 | 71.756 | 131 | 37 | 0 | 76 | 206 | 90 | 220 | 2.34e-59 | 204 |
Msa1302360 | AT3G05050.3 | 50.853 | 293 | 123 | 7 | 162 | 444 | 310 | 591 | 1.53e-74 | 244 |
Msa1302360 | AT3G05050.3 | 65.969 | 191 | 61 | 2 | 16 | 202 | 50 | 240 | 6.66e-73 | 240 |
Msa1302360 | AT3G05050.2 | 50.853 | 293 | 123 | 7 | 162 | 444 | 310 | 591 | 1.53e-74 | 244 |
Msa1302360 | AT3G05050.2 | 65.969 | 191 | 61 | 2 | 16 | 202 | 50 | 240 | 6.66e-73 | 240 |
Msa1302360 | AT3G05050.1 | 50.853 | 293 | 123 | 7 | 162 | 444 | 310 | 591 | 1.53e-74 | 244 |
Msa1302360 | AT3G05050.1 | 65.969 | 191 | 61 | 2 | 16 | 202 | 50 | 240 | 6.66e-73 | 240 |
Msa1302360 | AT1G53050.2 | 81.203 | 133 | 25 | 0 | 70 | 202 | 104 | 236 | 2.63e-68 | 230 |
Msa1302360 | AT1G53050.2 | 48.792 | 207 | 101 | 3 | 185 | 391 | 325 | 526 | 2.40e-55 | 195 |
Msa1302360 | AT1G53050.1 | 81.203 | 133 | 25 | 0 | 70 | 202 | 104 | 236 | 2.63e-68 | 230 |
Msa1302360 | AT1G53050.1 | 48.792 | 207 | 101 | 3 | 185 | 391 | 325 | 526 | 2.40e-55 | 195 |
Msa1302360 | AT1G74330.3 | 64.671 | 167 | 54 | 1 | 41 | 202 | 57 | 223 | 4.59e-66 | 223 |
Msa1302360 | AT1G74330.3 | 63.393 | 112 | 41 | 0 | 199 | 310 | 328 | 439 | 1.51e-43 | 162 |
Msa1302360 | AT1G74330.2 | 64.671 | 167 | 54 | 1 | 41 | 202 | 57 | 223 | 1.13e-65 | 223 |
Msa1302360 | AT1G74330.2 | 63.393 | 112 | 41 | 0 | 199 | 310 | 328 | 439 | 2.29e-43 | 162 |
Msa1302360 | AT1G74330.1 | 64.671 | 167 | 54 | 1 | 41 | 202 | 57 | 223 | 1.26e-65 | 223 |
Msa1302360 | AT1G74330.1 | 63.393 | 112 | 41 | 0 | 199 | 310 | 328 | 439 | 2.82e-43 | 162 |
Msa1302360 | AT1G18670.2 | 68.531 | 143 | 45 | 0 | 60 | 202 | 91 | 233 | 2.24e-64 | 219 |
Msa1302360 | AT1G18670.2 | 56.140 | 114 | 48 | 1 | 199 | 310 | 337 | 450 | 7.93e-36 | 140 |
Msa1302360 | AT1G18670.1 | 68.531 | 143 | 45 | 0 | 60 | 202 | 91 | 233 | 3.98e-64 | 219 |
Msa1302360 | AT1G18670.1 | 56.140 | 114 | 48 | 1 | 199 | 310 | 337 | 450 | 9.58e-36 | 140 |
Msa1302360 | AT1G18670.3 | 68.531 | 143 | 45 | 0 | 60 | 202 | 91 | 233 | 4.74e-64 | 219 |
Msa1302360 | AT1G18670.3 | 56.140 | 114 | 48 | 1 | 199 | 310 | 337 | 450 | 9.25e-36 | 140 |
Msa1302360 | AT1G71530.4 | 72.263 | 137 | 37 | 1 | 74 | 209 | 121 | 257 | 2.28e-63 | 209 |
Msa1302360 | AT1G33770.1 | 62.941 | 170 | 62 | 1 | 43 | 212 | 84 | 252 | 6.84e-63 | 214 |
Msa1302360 | AT1G33770.1 | 55.039 | 129 | 58 | 0 | 185 | 313 | 332 | 460 | 5.59e-33 | 132 |
Msa1302360 | AT1G09600.1 | 67.133 | 143 | 47 | 0 | 60 | 202 | 123 | 265 | 1.19e-62 | 216 |
Msa1302360 | AT1G09600.1 | 51.087 | 184 | 84 | 2 | 185 | 368 | 354 | 531 | 3.57e-49 | 179 |
Msa1302360 | AT1G71530.3 | 72.263 | 137 | 37 | 1 | 74 | 209 | 121 | 257 | 2.42e-62 | 208 |
Msa1302360 | AT1G71530.3 | 57.500 | 80 | 34 | 0 | 199 | 278 | 352 | 431 | 2.21e-22 | 99.4 |
Msa1302360 | AT1G71530.2 | 70.345 | 145 | 39 | 1 | 71 | 211 | 118 | 262 | 3.19e-62 | 209 |
Msa1302360 | AT1G71530.2 | 62.500 | 112 | 42 | 0 | 199 | 310 | 352 | 463 | 7.28e-41 | 152 |
Msa1302360 | AT5G50860.2 | 56.021 | 191 | 77 | 4 | 162 | 349 | 286 | 472 | 2.83e-61 | 207 |
Msa1302360 | AT5G50860.2 | 71.756 | 131 | 37 | 0 | 76 | 206 | 90 | 220 | 7.21e-60 | 203 |
Msa1302360 | AT1G71530.1 | 71.127 | 142 | 37 | 1 | 74 | 211 | 121 | 262 | 3.29e-61 | 211 |
Msa1302360 | AT1G71530.1 | 54.000 | 150 | 69 | 0 | 199 | 348 | 352 | 501 | 1.19e-44 | 165 |
Msa1302360 | AT5G39420.1 | 56.647 | 173 | 74 | 1 | 30 | 202 | 36 | 207 | 5.41e-61 | 210 |
Msa1302360 | AT5G39420.1 | 53.077 | 130 | 58 | 2 | 199 | 326 | 310 | 438 | 2.64e-38 | 147 |
Msa1302360 | AT4G10010.2 | 70.290 | 138 | 41 | 0 | 65 | 202 | 121 | 258 | 1.26e-60 | 209 |
Msa1302360 | AT4G10010.2 | 56.061 | 132 | 57 | 1 | 199 | 329 | 361 | 492 | 2.79e-41 | 155 |
Msa1302360 | AT1G57700.1 | 52.850 | 193 | 87 | 1 | 60 | 252 | 106 | 294 | 2.45e-58 | 203 |
Msa1302360 | AT1G57700.1 | 44.726 | 237 | 118 | 6 | 185 | 415 | 337 | 566 | 3.31e-46 | 170 |
Msa1302360 | AT3G01085.3 | 61.151 | 139 | 54 | 0 | 64 | 202 | 79 | 217 | 7.80e-55 | 193 |
Msa1302360 | AT3G01085.3 | 46.667 | 165 | 82 | 4 | 162 | 324 | 287 | 447 | 2.82e-39 | 150 |
Msa1302360 | AT3G01085.1 | 61.151 | 139 | 54 | 0 | 64 | 202 | 79 | 217 | 8.30e-55 | 193 |
Msa1302360 | AT3G01085.1 | 46.667 | 165 | 82 | 4 | 162 | 324 | 287 | 447 | 2.89e-39 | 150 |
Msa1302360 | AT3G01085.2 | 61.151 | 139 | 54 | 0 | 64 | 202 | 79 | 217 | 8.30e-55 | 193 |
Msa1302360 | AT3G01085.2 | 46.667 | 165 | 82 | 4 | 162 | 324 | 287 | 447 | 2.89e-39 | 150 |
Msa1302360 | AT5G44290.7 | 61.589 | 151 | 55 | 2 | 55 | 202 | 89 | 239 | 8.58e-55 | 190 |
Msa1302360 | AT5G44290.7 | 57.143 | 112 | 48 | 0 | 199 | 310 | 342 | 453 | 4.70e-38 | 145 |
Msa1302360 | AT1G03740.2 | 65.942 | 138 | 47 | 0 | 65 | 202 | 178 | 315 | 9.86e-55 | 194 |
Msa1302360 | AT1G03740.2 | 60.714 | 112 | 44 | 0 | 199 | 310 | 418 | 529 | 6.93e-40 | 152 |
Msa1302360 | AT1G03740.1 | 65.942 | 138 | 47 | 0 | 65 | 202 | 178 | 315 | 1.33e-54 | 194 |
Msa1302360 | AT1G03740.1 | 60.714 | 112 | 44 | 0 | 199 | 310 | 418 | 529 | 9.38e-40 | 152 |
Msa1302360 | AT5G44290.6 | 66.412 | 131 | 44 | 0 | 72 | 202 | 109 | 239 | 6.59e-54 | 190 |
Msa1302360 | AT5G44290.6 | 36.948 | 249 | 138 | 5 | 199 | 446 | 342 | 572 | 2.63e-38 | 147 |
Msa1302360 | AT5G44290.2 | 66.412 | 131 | 44 | 0 | 72 | 202 | 109 | 239 | 6.95e-54 | 191 |
Msa1302360 | AT5G44290.2 | 36.364 | 264 | 147 | 6 | 185 | 446 | 328 | 572 | 2.64e-38 | 147 |
Msa1302360 | AT5G44290.5 | 66.412 | 131 | 44 | 0 | 72 | 202 | 109 | 239 | 6.95e-54 | 191 |
Msa1302360 | AT5G44290.5 | 36.364 | 264 | 147 | 6 | 185 | 446 | 328 | 572 | 2.64e-38 | 147 |
Msa1302360 | AT5G44290.4 | 66.412 | 131 | 44 | 0 | 72 | 202 | 109 | 239 | 6.95e-54 | 191 |
Msa1302360 | AT5G44290.4 | 36.364 | 264 | 147 | 6 | 185 | 446 | 328 | 572 | 2.64e-38 | 147 |
Msa1302360 | AT5G44290.1 | 66.412 | 131 | 44 | 0 | 72 | 202 | 109 | 239 | 6.95e-54 | 191 |
Msa1302360 | AT5G44290.1 | 36.364 | 264 | 147 | 6 | 185 | 446 | 328 | 572 | 2.64e-38 | 147 |
Msa1302360 | AT5G44290.3 | 66.412 | 131 | 44 | 0 | 72 | 202 | 109 | 239 | 6.95e-54 | 191 |
Msa1302360 | AT5G44290.3 | 36.364 | 264 | 147 | 6 | 185 | 446 | 328 | 572 | 2.64e-38 | 147 |
Msa1302360 | AT4G10010.1 | 56.061 | 132 | 57 | 1 | 199 | 329 | 181 | 312 | 2.97e-42 | 155 |
Msa1302360 | AT4G10010.1 | 71.795 | 78 | 22 | 0 | 125 | 202 | 1 | 78 | 2.81e-30 | 122 |
Msa1302360 | AT4G22940.1 | 55.639 | 133 | 58 | 1 | 71 | 202 | 74 | 206 | 4.56e-37 | 141 |
Msa1302360 | AT4G22940.1 | 50.400 | 125 | 59 | 1 | 199 | 320 | 309 | 433 | 2.04e-32 | 128 |
Msa1302360 | AT4G22940.2 | 55.639 | 133 | 58 | 1 | 71 | 202 | 74 | 206 | 8.16e-37 | 142 |
Msa1302360 | AT4G22940.2 | 50.400 | 125 | 59 | 1 | 199 | 320 | 309 | 433 | 4.27e-32 | 129 |
Msa1302360 | AT5G10270.1 | 44.715 | 123 | 52 | 3 | 95 | 202 | 21 | 142 | 7.73e-24 | 104 |
Msa1302360 | AT5G10270.1 | 41.593 | 113 | 65 | 1 | 199 | 310 | 245 | 357 | 7.27e-20 | 92.4 |
Msa1302360 | AT5G64960.1 | 44.715 | 123 | 52 | 3 | 95 | 202 | 21 | 142 | 1.27e-23 | 103 |
Msa1302360 | AT5G64960.1 | 37.500 | 112 | 69 | 1 | 199 | 309 | 245 | 356 | 1.03e-16 | 82.8 |
Msa1302360 | AT1G67580.1 | 41.441 | 111 | 63 | 2 | 95 | 204 | 401 | 510 | 4.66e-17 | 84.3 |
Msa1302360 | AT1G67580.2 | 41.441 | 111 | 63 | 2 | 95 | 204 | 401 | 510 | 4.66e-17 | 84.3 |
Msa1302360 | AT5G64960.2 | 37.500 | 112 | 69 | 1 | 199 | 309 | 192 | 303 | 1.12e-16 | 82.4 |
Msa1302360 | AT3G48750.1 | 46.067 | 89 | 44 | 3 | 98 | 185 | 2 | 87 | 3.26e-14 | 73.6 |
Msa1302360 | AT1G66750.1 | 45.556 | 90 | 45 | 3 | 97 | 185 | 10 | 96 | 2.46e-13 | 71.6 |
Msa1302360 | AT5G63370.5 | 37.097 | 124 | 73 | 3 | 86 | 204 | 283 | 406 | 4.33e-13 | 71.6 |
Msa1302360 | AT5G63370.10 | 37.097 | 124 | 73 | 3 | 86 | 204 | 283 | 406 | 4.33e-13 | 71.6 |
Msa1302360 | AT5G63370.7 | 36.719 | 128 | 76 | 3 | 82 | 204 | 279 | 406 | 4.36e-13 | 71.6 |
Msa1302360 | AT5G63370.8 | 36.719 | 128 | 76 | 3 | 82 | 204 | 279 | 406 | 4.36e-13 | 71.6 |
Msa1302360 | AT5G63370.4 | 36.719 | 128 | 76 | 3 | 82 | 204 | 279 | 406 | 4.36e-13 | 71.6 |
Msa1302360 | AT5G63370.6 | 36.719 | 128 | 76 | 3 | 82 | 204 | 279 | 406 | 4.36e-13 | 71.6 |
Msa1302360 | AT5G63370.1 | 36.719 | 128 | 76 | 3 | 82 | 204 | 279 | 406 | 4.36e-13 | 71.6 |
Msa1302360 | AT5G63370.9 | 36.719 | 128 | 76 | 3 | 82 | 204 | 145 | 272 | 7.93e-13 | 70.5 |
Msa1302360 | AT5G63370.2 | 36.719 | 128 | 76 | 3 | 82 | 204 | 145 | 272 | 8.20e-13 | 70.5 |
Msa1302360 | AT5G63370.3 | 36.719 | 128 | 76 | 3 | 82 | 204 | 145 | 272 | 8.20e-13 | 70.5 |
Msa1302360 | AT1G76540.1 | 44.565 | 92 | 47 | 2 | 98 | 185 | 12 | 103 | 8.63e-13 | 69.3 |
Msa1302360 | AT1G20930.1 | 41.304 | 92 | 50 | 2 | 98 | 185 | 14 | 105 | 5.39e-11 | 63.9 |
Msa1302360 | AT1G73690.1 | 40.860 | 93 | 51 | 3 | 97 | 188 | 8 | 97 | 8.08e-11 | 63.9 |
Find 142 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGCTGCAGGGTGGCCTTCT+TGG | 0.105846 | 8_3:+64931020 | Msa1302360:CDS |
TCCTTACTGGGAGGATATTT+TGG | 0.156714 | 8_3:-64933739 | None:intergenic |
CTTTGTATCCATCTCCTTAC+TGG | 0.256576 | 8_3:-64933752 | None:intergenic |
GTTCTCCTTCTGAAGAATAT+TGG | 0.257276 | 8_3:+64933344 | Msa1302360:CDS |
AAAGCTAAGGATACTTTAAC+TGG | 0.269982 | 8_3:+64931454 | Msa1302360:CDS |
CCACTTGTTCACCATGTATA+TGG | 0.274391 | 8_3:-64931000 | None:intergenic |
TAGAAGGTTTAGTGACTTCT+AGG | 0.278860 | 8_3:+64931593 | Msa1302360:CDS |
CAGTGGGAGAAACTATTATT+AGG | 0.284353 | 8_3:+64930697 | Msa1302360:five_prime_UTR |
TCTTGGCTTTCCAAGGTTGC+TGG | 0.291039 | 8_3:+64931037 | Msa1302360:CDS |
TTCTGAAGAATATTGGAAAA+AGG | 0.310033 | 8_3:+64933351 | Msa1302360:CDS |
ACCACTAATTGACACCCTTC+TGG | 0.329479 | 8_3:+64933465 | Msa1302360:CDS |
GAGAAGTCTGTGGAACTAAA+TGG | 0.329628 | 8_3:-64934451 | None:intergenic |
TCAATACATGGAGCATGATT+TGG | 0.330178 | 8_3:+64931642 | Msa1302360:CDS |
TGAGACATGGGGTGTGTGTT+TGG | 0.330293 | 8_3:+64930797 | Msa1302360:exon |
CCCAATGTTATGAAACTAGA+AGG | 0.344515 | 8_3:+64931577 | Msa1302360:CDS |
CCGCATCAAGATGGAACTTT+AGG | 0.355567 | 8_3:+64934373 | Msa1302360:CDS |
GGATTGCTCAATCTTGGATT+AGG | 0.358788 | 8_3:-64930971 | None:intergenic |
GATCTAACATACATCAATAT+TGG | 0.363013 | 8_3:-64934209 | None:intergenic |
TTAGGTGGATTGCTCAATCT+TGG | 0.368018 | 8_3:-64930977 | None:intergenic |
CCTTCTAGTTTCATAACATT+GGG | 0.386072 | 8_3:-64931577 | None:intergenic |
TCCTTGTTCTTCTTTCTCCT+TGG | 0.388716 | 8_3:-64934535 | None:intergenic |
GGAACTTTAGGCTATCCTTT+TGG | 0.394423 | 8_3:+64934385 | Msa1302360:CDS |
GAGGAGACAAAGGGAAAGGA+GGG | 0.396220 | 8_3:+64930928 | Msa1302360:CDS |
GACAAAGGGAAAGGAGGGAG+AGG | 0.398371 | 8_3:+64930933 | Msa1302360:CDS |
GCCATGAATTTCACACTCTC+TGG | 0.399486 | 8_3:-64931520 | None:intergenic |
GGAGGAGACAAAGGGAAAGG+AGG | 0.401406 | 8_3:+64930927 | Msa1302360:CDS |
GAGACATGGGGTGTGTGTTT+GGG | 0.409493 | 8_3:+64930798 | Msa1302360:exon |
ACCTTCTAGTTTCATAACAT+TGG | 0.412697 | 8_3:-64931578 | None:intergenic |
ATGAGAAGAGGAGGAGACAA+AGG | 0.418698 | 8_3:+64930918 | Msa1302360:CDS |
GGGGTGTGTGTTTGGGAAAG+AGG | 0.422858 | 8_3:+64930805 | Msa1302360:CDS |
GTATCTTGTCTTTCAATACA+TGG | 0.423591 | 8_3:+64931630 | Msa1302360:CDS |
AATTCTGATATTGCGTCGTC+TGG | 0.426511 | 8_3:+64931549 | Msa1302360:CDS |
GTGGCCTTCTTGGCTTTCCA+AGG | 0.430998 | 8_3:+64931030 | Msa1302360:CDS |
TTTGACCACTGAGAAAGAAA+TGG | 0.435879 | 8_3:-64934929 | None:intergenic |
GACATCGTAAACTTAATTGC+AGG | 0.436819 | 8_3:-64931682 | None:intergenic |
TCAGCATTGACCTCTGGAAC+TGG | 0.437176 | 8_3:-64934178 | None:intergenic |
GACTTTAGATTAAGAGCTGT+TGG | 0.440051 | 8_3:+64934094 | Msa1302360:intron |
TCAGACCTGGTCCGGCCCAT+TGG | 0.448526 | 8_3:+64934492 | Msa1302360:CDS |
ACCAGAGAGTGTGAAATTCA+TGG | 0.449650 | 8_3:+64931519 | Msa1302360:CDS |
TTCGAGACGAAGAAGCTAGA+AGG | 0.453551 | 8_3:+64933776 | Msa1302360:CDS |
GCAAATATTCAGACCTGGTC+CGG | 0.454116 | 8_3:+64934484 | Msa1302360:CDS |
TGTTCACCATGTATATGGTT+AGG | 0.458117 | 8_3:-64930995 | None:intergenic |
GACCTGGTCCGGCCCATTGG+TGG | 0.461085 | 8_3:+64934495 | Msa1302360:CDS |
CTCACCCTCGGTTCCACCAA+TGG | 0.462877 | 8_3:-64934508 | None:intergenic |
ATCAAGCTTGTGAAAAGAAT+CGG | 0.464929 | 8_3:-64931092 | None:intergenic |
GGGTGTGTGTTTGGGAAAGA+GGG | 0.466260 | 8_3:+64930806 | Msa1302360:CDS |
AGTGAAAGTTGTTGCTAAGG+TGG | 0.468582 | 8_3:+64930850 | Msa1302360:CDS |
TCACCCTCGGTTCCACCAAT+GGG | 0.471006 | 8_3:-64934507 | None:intergenic |
GTGGCAGTTTGACGTTCAGC+TGG | 0.472173 | 8_3:-64933496 | None:intergenic |
TGCAGCTCAGCATTGACCTC+TGG | 0.479175 | 8_3:-64934184 | None:intergenic |
TTCCACCAATGGGCCGGACC+AGG | 0.479591 | 8_3:-64934497 | None:intergenic |
GTGGAACTAAATGGAACATC+AGG | 0.480993 | 8_3:-64934442 | None:intergenic |
AGGGTTCACAAGCATAAGGT+TGG | 0.481143 | 8_3:-64933708 | None:intergenic |
GCCAGAAGGGTGTCAATTAG+TGG | 0.481447 | 8_3:-64933466 | None:intergenic |
ATTAGTGGTAATGATGATAG+TGG | 0.485098 | 8_3:-64933451 | None:intergenic |
AAAGGGAAAGGAGGGAGAGG+AGG | 0.486046 | 8_3:+64930936 | Msa1302360:CDS |
AATTAAGTTTACGATGTCTC+AGG | 0.486566 | 8_3:+64931687 | Msa1302360:CDS |
TTAGAGGGTTCACAAGCATA+AGG | 0.492573 | 8_3:-64933712 | None:intergenic |
AGAGGAGGAGACAAAGGGAA+AGG | 0.496283 | 8_3:+64930924 | Msa1302360:CDS |
TCTGTATTTGTCGAATACAT+TGG | 0.497548 | 8_3:-64934722 | None:intergenic |
TTGACCACTGAGAAAGAAAT+GGG | 0.498611 | 8_3:-64934928 | None:intergenic |
TATGGCTTCTCCAGCAACCT+TGG | 0.499227 | 8_3:-64931047 | None:intergenic |
ACGCAATATCAGAATTTCTC+TGG | 0.499420 | 8_3:-64931542 | None:intergenic |
TGAGAAGAGGAGGAGACAAA+GGG | 0.501324 | 8_3:+64930919 | Msa1302360:CDS |
ATTTCTTTCTCAGTGGTCAA+AGG | 0.504161 | 8_3:+64934931 | Msa1302360:three_prime_UTR |
AATTGTACACGACATGTGAT+TGG | 0.505744 | 8_3:+64934677 | Msa1302360:three_prime_UTR |
GGGTTCACAAGCATAAGGTT+GGG | 0.508458 | 8_3:-64933707 | None:intergenic |
AGCTGGATCGATTGCCAGAA+GGG | 0.511615 | 8_3:-64933479 | None:intergenic |
TCGAGGTGTCAATCCATGTA+TGG | 0.513986 | 8_3:-64931065 | None:intergenic |
TCCAAAATATCCTCCCAGTA+AGG | 0.516656 | 8_3:+64933738 | Msa1302360:CDS |
CTCGTTCGCGTGATCGAAGT+GGG | 0.516706 | 8_3:+64934146 | Msa1302360:CDS |
TGAAAAGAATCGGCTCTTCG+AGG | 0.519950 | 8_3:-64931082 | None:intergenic |
GGTAGTGAAAGTTGTTGCTA+AGG | 0.519951 | 8_3:+64930847 | Msa1302360:CDS |
GTGGAGAGGATGAGAAGAGG+AGG | 0.528382 | 8_3:+64930909 | Msa1302360:CDS |
CATGGTGAACAAGTGGCTGC+AGG | 0.530494 | 8_3:+64931007 | Msa1302360:CDS |
AGGGTGGAGAGGATGAGAAG+AGG | 0.537303 | 8_3:+64930906 | Msa1302360:CDS |
ACAATCAAAGTCATCAAAGA+AGG | 0.537945 | 8_3:+64934573 | Msa1302360:CDS |
CATAAGATATTTAAGCTATG+TGG | 0.538338 | 8_3:+64933322 | Msa1302360:CDS |
GTTCCATCTTGATGCGGAGG+AGG | 0.540314 | 8_3:-64934367 | None:intergenic |
CCTCGGTTCCACCAATGGGC+CGG | 0.541584 | 8_3:-64934503 | None:intergenic |
TAGCAATGTTTACAAAGCTA+AGG | 0.541981 | 8_3:+64931441 | Msa1302360:CDS |
TGCTCCCATTTCTTTCTCAG+TGG | 0.542023 | 8_3:+64934924 | Msa1302360:three_prime_UTR |
CTGCAAATGGTAATAATCAA+AGG | 0.543455 | 8_3:-64930663 | None:intergenic |
GAAAGTTGTTGCTAAGGTGG+AGG | 0.544402 | 8_3:+64930853 | Msa1302360:CDS |
CGGCCCATTGGTGGAACCGA+GGG | 0.547339 | 8_3:+64934504 | Msa1302360:CDS |
TTTGTATCCATCTCCTTACT+GGG | 0.548270 | 8_3:-64933751 | None:intergenic |
CTCTTGTGACTAGAAAGAAA+TGG | 0.548575 | 8_3:-64934879 | None:intergenic |
TACATGGAGCATGATTTGGC+TGG | 0.549416 | 8_3:+64931646 | Msa1302360:CDS |
AGATTAAGAGCTGTTGGCAA+AGG | 0.551775 | 8_3:+64934100 | Msa1302360:intron |
TATTTGTCGAATACATTGGA+GGG | 0.552089 | 8_3:-64934718 | None:intergenic |
GTATTTGTCGAATACATTGG+AGG | 0.553967 | 8_3:-64934719 | None:intergenic |
GCAACCTTGGAAAGCCAAGA+AGG | 0.554468 | 8_3:-64931034 | None:intergenic |
GGGTTCAGAAAGGAAGAAAG+AGG | 0.555081 | 8_3:+64930826 | Msa1302360:CDS |
ATATCCTCCCAGTAAGGAGA+TGG | 0.555196 | 8_3:+64933744 | Msa1302360:CDS |
TTTCCTCCTCCGCATCAAGA+TGG | 0.555820 | 8_3:+64934364 | Msa1302360:CDS |
TTGGGAAAGAGGGTTCAGAA+AGG | 0.556463 | 8_3:+64930816 | Msa1302360:CDS |
ATGTGACATGAAGAACCAAA+AGG | 0.557076 | 8_3:-64934400 | None:intergenic |
CCGGCCCATTGGTGGAACCG+AGG | 0.560234 | 8_3:+64934503 | Msa1302360:CDS |
ACTGAGAAAGAAATGGGAGC+AGG | 0.562994 | 8_3:-64934922 | None:intergenic |
GTCATCACAGAGATGGAGAC+TGG | 0.565509 | 8_3:+64934306 | Msa1302360:intron |
TCGCGTGATCGAAGTGGGAG+GGG | 0.566336 | 8_3:+64934151 | Msa1302360:CDS |
AGTTGTTGCTAAGGTGGAGG+AGG | 0.570498 | 8_3:+64930856 | Msa1302360:CDS |
TCACCATGTATATGGTTAGG+TGG | 0.570651 | 8_3:-64930992 | None:intergenic |
GTTGCTGGAGAAGCCATACA+TGG | 0.573652 | 8_3:+64931052 | Msa1302360:CDS |
CACCGCTTATATGATTGTTG+TGG | 0.575022 | 8_3:-64933403 | None:intergenic |
CATGAGAGAAAATGTGGTTG+TGG | 0.576723 | 8_3:+64930741 | Msa1302360:five_prime_UTR |
CCATATACATGGTGAACAAG+TGG | 0.577052 | 8_3:+64931000 | Msa1302360:CDS |
TTCGCTGTGCAATGCAGCAG+TGG | 0.577965 | 8_3:-64933515 | None:intergenic |
CAGTTTATGAACATTTAATG+AGG | 0.578088 | 8_3:+64935004 | Msa1302360:three_prime_UTR |
TTCGCGTGATCGAAGTGGGA+GGG | 0.578284 | 8_3:+64934150 | Msa1302360:CDS |
CAGCTGGATCGATTGCCAGA+AGG | 0.579699 | 8_3:-64933480 | None:intergenic |
TGAAGTTCAAAATGAGCAAG+AGG | 0.582904 | 8_3:+64930886 | Msa1302360:CDS |
TCTCGTTCGCGTGATCGAAG+TGG | 0.587051 | 8_3:+64934145 | Msa1302360:CDS |
AAATGTGTATTGTGAGACAT+GGG | 0.589385 | 8_3:+64930785 | Msa1302360:exon |
GTTCGCGTGATCGAAGTGGG+AGG | 0.590299 | 8_3:+64934149 | Msa1302360:CDS |
TATCACATTGACATTCGTGA+TGG | 0.598228 | 8_3:+64934768 | Msa1302360:three_prime_UTR |
TTAGTGGTAATGATGATAGT+GGG | 0.602145 | 8_3:-64933450 | None:intergenic |
AGGAGAAAGAAGAACAAGGA+AGG | 0.610096 | 8_3:+64934538 | Msa1302360:CDS |
AATCCACCTAACCATATACA+TGG | 0.611033 | 8_3:+64930989 | Msa1302360:CDS |
ATGACTTTGATTGTATGTGT+CGG | 0.617839 | 8_3:-64934564 | None:intergenic |
GTTGGCAAAGGTAATGCTGT+TGG | 0.618474 | 8_3:+64934112 | Msa1302360:CDS |
AAAGTTCCATCTTGATGCGG+AGG | 0.622713 | 8_3:-64934370 | None:intergenic |
ACATCGTAAACTTAATTGCA+GGG | 0.622809 | 8_3:-64931681 | None:intergenic |
AGCCACAACAATCATATAAG+CGG | 0.623624 | 8_3:+64933401 | Msa1302360:CDS |
TAAATGTGTATTGTGAGACA+TGG | 0.625764 | 8_3:+64930784 | Msa1302360:exon |
AGAAAGAAGAACAAGGAAGG+TGG | 0.631869 | 8_3:+64934541 | Msa1302360:CDS |
GAACTAAATGGAACATCAGG+AGG | 0.634542 | 8_3:-64934439 | None:intergenic |
GTTCAAAATGAGCAAGAGGG+TGG | 0.638435 | 8_3:+64930890 | Msa1302360:CDS |
AAATGAGCAAGAGGGTGGAG+AGG | 0.644872 | 8_3:+64930895 | Msa1302360:CDS |
AAGCTAAGGATACTTTAACT+GGG | 0.661588 | 8_3:+64931455 | Msa1302360:CDS |
GAGGGGAATTCCAGTTCCAG+AGG | 0.661658 | 8_3:+64934168 | Msa1302360:CDS |
GTGTTGCATGAGAGAAAATG+TGG | 0.662221 | 8_3:+64930735 | Msa1302360:five_prime_UTR |
ATGGTGAACAAGTGGCTGCA+GGG | 0.666272 | 8_3:+64931008 | Msa1302360:CDS |
CCTAAAGTTCCATCTTGATG+CGG | 0.669316 | 8_3:-64934373 | None:intergenic |
GTATCCATCTCCTTACTGGG+AGG | 0.669555 | 8_3:-64933748 | None:intergenic |
GCCAAGGAGAAAGAAGAACA+AGG | 0.671025 | 8_3:+64934534 | Msa1302360:CDS |
ATGTCGTGTACAATTTCGTG+AGG | 0.682066 | 8_3:-64934669 | None:intergenic |
ATAAAGCAAATATTCAGACC+TGG | 0.685368 | 8_3:+64934479 | Msa1302360:CDS |
GAAGTTCAAAATGAGCAAGA+GGG | 0.688429 | 8_3:+64930887 | Msa1302360:CDS |
GTGAACAAGTGGCTGCAGGG+TGG | 0.746659 | 8_3:+64931011 | Msa1302360:CDS |
TTTATGATATGAGAAGTCTG+TGG | 0.779014 | 8_3:-64934461 | None:intergenic |
AATGTGTATTGTGAGACATG+GGG | 0.794885 | 8_3:+64930786 | Msa1302360:exon |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATGTAGTAATTATATA+AGG | - | chr8_3:64932050-64932069 | None:intergenic | 10.0% |
!! | CTTAAATTAATAAAACATTA+GGG | - | chr8_3:64933637-64933656 | None:intergenic | 10.0% |
!! | AATTCTATTTGTAACATTTA+TGG | + | chr8_3:64931286-64931305 | Msa1302360:intron | 15.0% |
!! | CCTTAAATTAATAAAACATT+AGG | - | chr8_3:64933638-64933657 | None:intergenic | 15.0% |
!!! | CCTAATGTTTTATTAATTTA+AGG | + | chr8_3:64933635-64933654 | Msa1302360:intron | 15.0% |
!!! | TGTTTTATTAATTTAAGGTA+AGG | + | chr8_3:64933640-64933659 | Msa1302360:intron | 15.0% |
!!! | AATACTTAATCGTAATTTTT+GGG | - | chr8_3:64934822-64934841 | None:intergenic | 15.0% |
!!! | CATTTTGGAAAATAGTAATA+TGG | + | chr8_3:64931313-64931332 | Msa1302360:intron | 20.0% |
!!! | TTTTTATTTGGAACTTGTTT+AGG | + | chr8_3:64931767-64931786 | Msa1302360:intron | 20.0% |
!! | TAATTAATTAGCATTCAGAA+TGG | + | chr8_3:64932195-64932214 | Msa1302360:intron | 20.0% |
!! | AACAATACAATGAAATTAGT+AGG | - | chr8_3:64933157-64933176 | None:intergenic | 20.0% |
!!! | ATTTGACATGTACATATTTT+AGG | + | chr8_3:64933944-64933963 | Msa1302360:intron | 20.0% |
!! | TAATTTCTTCTATCAAAAAC+TGG | - | chr8_3:64934012-64934031 | None:intergenic | 20.0% |
!!! | GTTTTTGATAGAAGAAATTA+TGG | + | chr8_3:64934012-64934031 | Msa1302360:intron | 20.0% |
!!! | ACTTTTATTTTTCAATACTG+TGG | + | chr8_3:64934267-64934286 | Msa1302360:intron | 20.0% |
!!! | GAATACTTAATCGTAATTTT+TGG | - | chr8_3:64934823-64934842 | None:intergenic | 20.0% |
!!! | TGAATTTTAAAAGCTGCAAA+TGG | - | chr8_3:64930679-64930698 | None:intergenic | 25.0% |
! | TTGTACACAAAAACAAATCA+AGG | - | chr8_3:64931139-64931158 | None:intergenic | 25.0% |
! | CAGGATCTTAGTATTTAAAT+TGG | + | chr8_3:64931192-64931211 | Msa1302360:intron | 25.0% |
! | AGTTGTACTAAATAATAGAC+AGG | + | chr8_3:64931234-64931253 | Msa1302360:intron | 25.0% |
!! | AACATTTATGGTGTACATTT+TGG | + | chr8_3:64931298-64931317 | Msa1302360:intron | 25.0% |
!!! | GTACTATTTTTCAATCAGAT+TGG | + | chr8_3:64931406-64931425 | Msa1302360:intron | 25.0% |
! | GAAAATTGTCGCATTAAAAA+AGG | + | chr8_3:64931477-64931496 | Msa1302360:CDS | 25.0% |
! | GTATTGAAATAGTTACCTTT+AGG | + | chr8_3:64931709-64931728 | Msa1302360:intron | 25.0% |
! | AAACAATTGTAATCACCTAA+AGG | - | chr8_3:64931727-64931746 | None:intergenic | 25.0% |
!! | TCGGATTTTGAATGAATATA+AGG | - | chr8_3:64932026-64932045 | None:intergenic | 25.0% |
! | TGTAGTAATTATATAAGGCT+CGG | - | chr8_3:64932045-64932064 | None:intergenic | 25.0% |
!!! | AGAGTAGTAATTGTTTTTGA+AGG | + | chr8_3:64932160-64932179 | Msa1302360:intron | 25.0% |
!!! | ATGATTTTGAAATTCGAATC+TGG | + | chr8_3:64932459-64932478 | Msa1302360:intron | 25.0% |
! | ACAATGAAATTAGTAGGATT+TGG | - | chr8_3:64933151-64933170 | None:intergenic | 25.0% |
!! | TTCATTGTATTGTTTCTCTA+AGG | + | chr8_3:64933163-64933182 | Msa1302360:intron | 25.0% |
!! | TCATTGTATTGTTTCTCTAA+GGG | + | chr8_3:64933164-64933183 | Msa1302360:intron | 25.0% |
! | CATAAGATATTTAAGCTATG+TGG | + | chr8_3:64933322-64933341 | Msa1302360:CDS | 25.0% |
!! | TTTTTCCAATATTCTTCAGA+AGG | - | chr8_3:64933352-64933371 | None:intergenic | 25.0% |
!! | TTCTGAAGAATATTGGAAAA+AGG | + | chr8_3:64933351-64933370 | Msa1302360:CDS | 25.0% |
! | TTGATAGAAGAAATTATGGA+AGG | + | chr8_3:64934016-64934035 | Msa1302360:intron | 25.0% |
! | TGATAGAAGAAATTATGGAA+GGG | + | chr8_3:64934017-64934036 | Msa1302360:intron | 25.0% |
! | GATCTAACATACATCAATAT+TGG | - | chr8_3:64934212-64934231 | None:intergenic | 25.0% |
! | ATATTGATGTATGTTAGATC+AGG | + | chr8_3:64934212-64934231 | Msa1302360:intron | 25.0% |
! | CAGTTTATGAACATTTAATG+AGG | + | chr8_3:64935004-64935023 | Msa1302360:three_prime_UTR | 25.0% |
!!! | TTGCAGCTTTTAAAATTCAG+TGG | + | chr8_3:64930680-64930699 | Msa1302360:five_prime_UTR | 30.0% |
!!! | TGCAGCTTTTAAAATTCAGT+GGG | + | chr8_3:64930681-64930700 | Msa1302360:five_prime_UTR | 30.0% |
!! | TATTAGGTTTTGATACTCTG+TGG | + | chr8_3:64930713-64930732 | Msa1302360:five_prime_UTR | 30.0% |
TAAATGTGTATTGTGAGACA+TGG | + | chr8_3:64930784-64930803 | Msa1302360:exon | 30.0% | |
AAATGTGTATTGTGAGACAT+GGG | + | chr8_3:64930785-64930804 | Msa1302360:exon | 30.0% | |
ATCAAGCTTGTGAAAAGAAT+CGG | - | chr8_3:64931095-64931114 | None:intergenic | 30.0% | |
! | TTCTTTTCACAAGCTTGATA+AGG | + | chr8_3:64931096-64931115 | Msa1302360:CDS | 30.0% |
ACAAAAACAAATCAAGGCAT+TGG | - | chr8_3:64931133-64931152 | None:intergenic | 30.0% | |
CAACTTGTGTTTAATTACTG+CGG | - | chr8_3:64931219-64931238 | None:intergenic | 30.0% | |
! | AGTAATATGGATTTGAGACA+TGG | + | chr8_3:64931326-64931345 | Msa1302360:intron | 30.0% |
!! | TTTTTCAATCAGATTGGACA+AGG | + | chr8_3:64931412-64931431 | Msa1302360:intron | 30.0% |
TAGCAATGTTTACAAAGCTA+AGG | + | chr8_3:64931441-64931460 | Msa1302360:CDS | 30.0% | |
AAAGCTAAGGATACTTTAAC+TGG | + | chr8_3:64931454-64931473 | Msa1302360:CDS | 30.0% | |
AAGCTAAGGATACTTTAACT+GGG | + | chr8_3:64931455-64931474 | Msa1302360:CDS | 30.0% | |
!! | CCTTCTAGTTTCATAACATT+GGG | - | chr8_3:64931580-64931599 | None:intergenic | 30.0% |
!! | ACCTTCTAGTTTCATAACAT+TGG | - | chr8_3:64931581-64931600 | None:intergenic | 30.0% |
GTATCTTGTCTTTCAATACA+TGG | + | chr8_3:64931630-64931649 | Msa1302360:CDS | 30.0% | |
ACATCGTAAACTTAATTGCA+GGG | - | chr8_3:64931684-64931703 | None:intergenic | 30.0% | |
AATTAAGTTTACGATGTCTC+AGG | + | chr8_3:64931687-64931706 | Msa1302360:CDS | 30.0% | |
TCTTTCTCGGTAAAAACAAT+AGG | - | chr8_3:64932284-64932303 | None:intergenic | 30.0% | |
! | CTCTTTTTCTTCTTCTTTCT+CGG | - | chr8_3:64932297-64932316 | None:intergenic | 30.0% |
AGATGGAGATGTTTATCTTA+TGG | - | chr8_3:64932357-64932376 | None:intergenic | 30.0% | |
TTGAAATTCGAATCTGGAAA+AGG | + | chr8_3:64932465-64932484 | Msa1302360:intron | 30.0% | |
TGAAATTCGAATCTGGAAAA+GGG | + | chr8_3:64932466-64932485 | Msa1302360:intron | 30.0% | |
TTGACAATGAAGGAATTCTT+AGG | + | chr8_3:64932722-64932741 | Msa1302360:intron | 30.0% | |
!!! | ATTCTTAGGATTGCTGATTT+TGG | + | chr8_3:64932736-64932755 | Msa1302360:intron | 30.0% |
TTTGTGATTAGGATCAAAGA+AGG | - | chr8_3:64932770-64932789 | None:intergenic | 30.0% | |
CTGTATTCTTGCTGAATTAT+TGG | + | chr8_3:64932891-64932910 | Msa1302360:intron | 30.0% | |
!! | TTTTCTTCAACTTGTTTGTG+AGG | + | chr8_3:64933237-64933256 | Msa1302360:intron | 30.0% |
TAATATCCTTCATGCTTCAT+AGG | + | chr8_3:64933288-64933307 | Msa1302360:intron | 30.0% | |
! | TTAGTGGTAATGATGATAGT+GGG | - | chr8_3:64933453-64933472 | None:intergenic | 30.0% |
! | ATTAGTGGTAATGATGATAG+TGG | - | chr8_3:64933454-64933473 | None:intergenic | 30.0% |
AAAACTGGAAAGGAAAGAAA+TGG | - | chr8_3:64933997-64934016 | None:intergenic | 30.0% | |
TCTTCTATCAAAAACTGGAA+AGG | - | chr8_3:64934007-64934026 | None:intergenic | 30.0% | |
GATAGAAGAAATTATGGAAG+GGG | + | chr8_3:64934018-64934037 | Msa1302360:intron | 30.0% | |
TTTATGATATGAGAAGTCTG+TGG | - | chr8_3:64934464-64934483 | None:intergenic | 30.0% | |
ATAAAGCAAATATTCAGACC+TGG | + | chr8_3:64934479-64934498 | Msa1302360:CDS | 30.0% | |
ATGACTTTGATTGTATGTGT+CGG | - | chr8_3:64934567-64934586 | None:intergenic | 30.0% | |
ACAATCAAAGTCATCAAAGA+AGG | + | chr8_3:64934573-64934592 | Msa1302360:CDS | 30.0% | |
TATTTGTCGAATACATTGGA+GGG | - | chr8_3:64934721-64934740 | None:intergenic | 30.0% | |
TCTGTATTTGTCGAATACAT+TGG | - | chr8_3:64934725-64934744 | None:intergenic | 30.0% | |
!! | TGTCAATGTGATACTTTTTG+TGG | - | chr8_3:64934761-64934780 | None:intergenic | 30.0% |
CAGTGGGAGAAACTATTATT+AGG | + | chr8_3:64930697-64930716 | Msa1302360:five_prime_UTR | 35.0% | |
AATGTGTATTGTGAGACATG+GGG | + | chr8_3:64930786-64930805 | Msa1302360:exon | 35.0% | |
TGAAGTTCAAAATGAGCAAG+AGG | + | chr8_3:64930886-64930905 | Msa1302360:CDS | 35.0% | |
GAAGTTCAAAATGAGCAAGA+GGG | + | chr8_3:64930887-64930906 | Msa1302360:CDS | 35.0% | |
AATCCACCTAACCATATACA+TGG | + | chr8_3:64930989-64931008 | Msa1302360:CDS | 35.0% | |
TGTTCACCATGTATATGGTT+AGG | - | chr8_3:64930998-64931017 | None:intergenic | 35.0% | |
! | ATATGGATTTGAGACATGGT+AGG | + | chr8_3:64931330-64931349 | Msa1302360:intron | 35.0% |
ACGCAATATCAGAATTTCTC+TGG | - | chr8_3:64931545-64931564 | None:intergenic | 35.0% | |
CCCAATGTTATGAAACTAGA+AGG | + | chr8_3:64931577-64931596 | Msa1302360:CDS | 35.0% | |
TAGAAGGTTTAGTGACTTCT+AGG | + | chr8_3:64931593-64931612 | Msa1302360:CDS | 35.0% | |
TCAATACATGGAGCATGATT+TGG | + | chr8_3:64931642-64931661 | Msa1302360:CDS | 35.0% | |
GACATCGTAAACTTAATTGC+AGG | - | chr8_3:64931685-64931704 | None:intergenic | 35.0% | |
TACGTCACTCTCAAAGAATT+GGG | + | chr8_3:64931879-64931898 | Msa1302360:intron | 35.0% | |
TCAAAGAATTGGGTTCGTTA+GGG | + | chr8_3:64931889-64931908 | Msa1302360:intron | 35.0% | |
ACATAGTCGGTACGTTAATT+AGG | + | chr8_3:64931916-64931935 | Msa1302360:intron | 35.0% | |
TATCTTATGGAACAGACGAA+AGG | - | chr8_3:64932344-64932363 | None:intergenic | 35.0% | |
AGGTTGCATGAAAGATTTAG+GGG | - | chr8_3:64932408-64932427 | None:intergenic | 35.0% | |
CAGGTTGCATGAAAGATTTA+GGG | - | chr8_3:64932409-64932428 | None:intergenic | 35.0% | |
! | TCAGGTTGCATGAAAGATTT+AGG | - | chr8_3:64932410-64932429 | None:intergenic | 35.0% |
GATGTGGAAGAAACAATTTC+AGG | - | chr8_3:64932428-64932447 | None:intergenic | 35.0% | |
! | TTGTTTCTTCCACATCTTTC+TGG | + | chr8_3:64932432-64932451 | Msa1302360:intron | 35.0% |
AATCTGGAAAAGGGAGAAAT+CGG | + | chr8_3:64932475-64932494 | Msa1302360:intron | 35.0% | |
! | AGAAATCGGGACATTTTTCA+CGG | + | chr8_3:64932489-64932508 | Msa1302360:intron | 35.0% |
!! | CAACACGAATTTTGAAGAAC+CGG | + | chr8_3:64932553-64932572 | Msa1302360:intron | 35.0% |
!! | AACACGAATTTTGAAGAACC+GGG | + | chr8_3:64932554-64932573 | Msa1302360:intron | 35.0% |
AACCTTCTTGTTGACAATGA+AGG | + | chr8_3:64932712-64932731 | Msa1302360:intron | 35.0% | |
TTCCTTCATTGTCAACAAGA+AGG | - | chr8_3:64932717-64932736 | None:intergenic | 35.0% | |
GTCATAGGATGTTTGTGATT+AGG | - | chr8_3:64932781-64932800 | None:intergenic | 35.0% | |
ACAAACATCCTATGACTAGT+AGG | + | chr8_3:64932785-64932804 | Msa1302360:intron | 35.0% | |
CAAACATCCTATGACTAGTA+GGG | + | chr8_3:64932786-64932805 | Msa1302360:intron | 35.0% | |
ATTCTTGCTGAATTATTGGC+TGG | + | chr8_3:64932895-64932914 | Msa1302360:intron | 35.0% | |
CAGAGGTAAGATCTCTAATT+CGG | + | chr8_3:64932941-64932960 | Msa1302360:intron | 35.0% | |
ATTGTCCTGTCATGATTCAA+CGG | + | chr8_3:64933074-64933093 | Msa1302360:intron | 35.0% | |
TTAGTAGGATTTGGATTTGC+TGG | - | chr8_3:64933142-64933161 | None:intergenic | 35.0% | |
! | GTTCTCCTTCTGAAGAATAT+TGG | + | chr8_3:64933344-64933363 | Msa1302360:CDS | 35.0% |
GGCTTAAAAATTGTAGCATG+TGG | - | chr8_3:64933385-64933404 | None:intergenic | 35.0% | |
AGCCACAACAATCATATAAG+CGG | + | chr8_3:64933401-64933420 | Msa1302360:CDS | 35.0% | |
!! | GGATATTTTGGAAGGTTAGA+GGG | - | chr8_3:64933730-64933749 | None:intergenic | 35.0% |
!! | AGGATATTTTGGAAGGTTAG+AGG | - | chr8_3:64933731-64933750 | None:intergenic | 35.0% |
TTTGTATCCATCTCCTTACT+GGG | - | chr8_3:64933754-64933773 | None:intergenic | 35.0% | |
!! | ATGGACTGAATTGACTTGAA+TGG | - | chr8_3:64933978-64933997 | None:intergenic | 35.0% |
GACTTTAGATTAAGAGCTGT+TGG | + | chr8_3:64934094-64934113 | Msa1302360:intron | 35.0% | |
ATGTGACATGAAGAACCAAA+AGG | - | chr8_3:64934403-64934422 | None:intergenic | 35.0% | |
AATTGTACACGACATGTGAT+TGG | + | chr8_3:64934677-64934696 | Msa1302360:three_prime_UTR | 35.0% | |
GTATTTGTCGAATACATTGG+AGG | - | chr8_3:64934722-64934741 | None:intergenic | 35.0% | |
!! | CAATGTGATACTTTTTGTGG+TGG | - | chr8_3:64934758-64934777 | None:intergenic | 35.0% |
TATCACATTGACATTCGTGA+TGG | + | chr8_3:64934768-64934787 | Msa1302360:three_prime_UTR | 35.0% | |
CTCTTGTGACTAGAAAGAAA+TGG | - | chr8_3:64934882-64934901 | None:intergenic | 35.0% | |
TTGACCACTGAGAAAGAAAT+GGG | - | chr8_3:64934931-64934950 | None:intergenic | 35.0% | |
TTTGACCACTGAGAAAGAAA+TGG | - | chr8_3:64934932-64934951 | None:intergenic | 35.0% | |
ATTTCTTTCTCAGTGGTCAA+AGG | + | chr8_3:64934931-64934950 | Msa1302360:three_prime_UTR | 35.0% | |
GTGTTGCATGAGAGAAAATG+TGG | + | chr8_3:64930735-64930754 | Msa1302360:five_prime_UTR | 40.0% | |
CATGAGAGAAAATGTGGTTG+TGG | + | chr8_3:64930741-64930760 | Msa1302360:five_prime_UTR | 40.0% | |
GGTAGTGAAAGTTGTTGCTA+AGG | + | chr8_3:64930847-64930866 | Msa1302360:CDS | 40.0% | |
AGTGAAAGTTGTTGCTAAGG+TGG | + | chr8_3:64930850-64930869 | Msa1302360:CDS | 40.0% | |
GGATTGCTCAATCTTGGATT+AGG | - | chr8_3:64930974-64930993 | None:intergenic | 40.0% | |
!! | TTAGGTGGATTGCTCAATCT+TGG | - | chr8_3:64930980-64930999 | None:intergenic | 40.0% |
TCACCATGTATATGGTTAGG+TGG | - | chr8_3:64930995-64931014 | None:intergenic | 40.0% | |
CCACTTGTTCACCATGTATA+TGG | - | chr8_3:64931003-64931022 | None:intergenic | 40.0% | |
CCATATACATGGTGAACAAG+TGG | + | chr8_3:64931000-64931019 | Msa1302360:CDS | 40.0% | |
!! | CAAATCAAGGCATTGGCATT+TGG | - | chr8_3:64931126-64931145 | None:intergenic | 40.0% |
! | ACCAGAGAGTGTGAAATTCA+TGG | + | chr8_3:64931519-64931538 | Msa1302360:CDS | 40.0% |
AATTCTGATATTGCGTCGTC+TGG | + | chr8_3:64931549-64931568 | Msa1302360:CDS | 40.0% | |
! | TACATGCATCAGCTACTTTC+TGG | + | chr8_3:64931798-64931817 | Msa1302360:intron | 40.0% |
GTACGTCACTCTCAAAGAAT+TGG | + | chr8_3:64931878-64931897 | Msa1302360:intron | 40.0% | |
CTCAAAGAATTGGGTTCGTT+AGG | + | chr8_3:64931888-64931907 | Msa1302360:intron | 40.0% | |
CAAAGAATTGGGTTCGTTAG+GGG | + | chr8_3:64931890-64931909 | Msa1302360:intron | 40.0% | |
! | TCGTTAGGGGTATACATAGT+CGG | + | chr8_3:64931903-64931922 | Msa1302360:intron | 40.0% |
CATTCAGAATGGTCACTGTA+AGG | + | chr8_3:64932206-64932225 | Msa1302360:intron | 40.0% | |
GATTTAGGGGAGAAGAAGAA+AGG | - | chr8_3:64932395-64932414 | None:intergenic | 40.0% | |
ATCATGAGTCCAGAAAGATG+TGG | - | chr8_3:64932444-64932463 | None:intergenic | 40.0% | |
ATCTGGAAAAGGGAGAAATC+GGG | + | chr8_3:64932476-64932495 | Msa1302360:intron | 40.0% | |
! | GGTTTGCTCTTCTATTCAAC+CGG | + | chr8_3:64932510-64932529 | Msa1302360:intron | 40.0% |
TGTTGAATTCGCAGAAGGTA+AGG | - | chr8_3:64932538-64932557 | None:intergenic | 40.0% | |
ATTCGTGTTGAATTCGCAGA+AGG | - | chr8_3:64932543-64932562 | None:intergenic | 40.0% | |
CACAGAATTCGTCATTTCAC+TGG | - | chr8_3:64932628-64932647 | None:intergenic | 40.0% | |
CGAATTCTGTGACTATGTTC+TGG | + | chr8_3:64932637-64932656 | Msa1302360:intron | 40.0% | |
TATCACGATGCAGCACATTA+CGG | - | chr8_3:64932681-64932700 | None:intergenic | 40.0% | |
TGTGCTGCATCGTGATATAA+AGG | + | chr8_3:64932684-64932703 | Msa1302360:intron | 40.0% | |
GTGCTGCATCGTGATATAAA+GGG | + | chr8_3:64932685-64932704 | Msa1302360:intron | 40.0% | |
! | CTAGTAGGGTGGTTACTTTA+TGG | + | chr8_3:64932800-64932819 | Msa1302360:intron | 40.0% |
GATTCCTACACCATAATCAG+TGG | - | chr8_3:64932854-64932873 | None:intergenic | 40.0% | |
! | TTGCTGAATTATTGGCTGGA+AGG | + | chr8_3:64932899-64932918 | Msa1302360:intron | 40.0% |
ACCATTGGATTGAGATCAGA+CGG | + | chr8_3:64932986-64933005 | Msa1302360:intron | 40.0% | |
CATTCACACAGTCAACACAT+CGG | - | chr8_3:64933103-64933122 | None:intergenic | 40.0% | |
TATCCTTCATGCTTCATAGG+TGG | + | chr8_3:64933291-64933310 | Msa1302360:intron | 40.0% | |
CACCGCTTATATGATTGTTG+TGG | - | chr8_3:64933406-64933425 | None:intergenic | 40.0% | |
TTAGAGGGTTCACAAGCATA+AGG | - | chr8_3:64933715-64933734 | None:intergenic | 40.0% | |
!! | TACTGGGAGGATATTTTGGA+AGG | - | chr8_3:64933738-64933757 | None:intergenic | 40.0% |
TCCAAAATATCCTCCCAGTA+AGG | + | chr8_3:64933738-64933757 | Msa1302360:CDS | 40.0% | |
! | TCCTTACTGGGAGGATATTT+TGG | - | chr8_3:64933742-64933761 | None:intergenic | 40.0% |
CTTTGTATCCATCTCCTTAC+TGG | - | chr8_3:64933755-64933774 | None:intergenic | 40.0% | |
AGATTAAGAGCTGTTGGCAA+AGG | + | chr8_3:64934100-64934119 | Msa1302360:intron | 40.0% | |
CCTAAAGTTCCATCTTGATG+CGG | - | chr8_3:64934376-64934395 | None:intergenic | 40.0% | |
! | GGAACTTTAGGCTATCCTTT+TGG | + | chr8_3:64934385-64934404 | Msa1302360:CDS | 40.0% |
ACATCAGGAGGATCAAAAAC+TGG | - | chr8_3:64934430-64934449 | None:intergenic | 40.0% | |
GAACTAAATGGAACATCAGG+AGG | - | chr8_3:64934442-64934461 | None:intergenic | 40.0% | |
GTGGAACTAAATGGAACATC+AGG | - | chr8_3:64934445-64934464 | None:intergenic | 40.0% | |
GAGAAGTCTGTGGAACTAAA+TGG | - | chr8_3:64934454-64934473 | None:intergenic | 40.0% | |
TCCTTGTTCTTCTTTCTCCT+TGG | - | chr8_3:64934538-64934557 | None:intergenic | 40.0% | |
AGGAGAAAGAAGAACAAGGA+AGG | + | chr8_3:64934538-64934557 | Msa1302360:CDS | 40.0% | |
AGAAAGAAGAACAAGGAAGG+TGG | + | chr8_3:64934541-64934560 | Msa1302360:CDS | 40.0% | |
ATGTCGTGTACAATTTCGTG+AGG | - | chr8_3:64934672-64934691 | None:intergenic | 40.0% | |
TTGGGAAAGAGGGTTCAGAA+AGG | + | chr8_3:64930816-64930835 | Msa1302360:CDS | 45.0% | |
GGGTTCAGAAAGGAAGAAAG+AGG | + | chr8_3:64930826-64930845 | Msa1302360:CDS | 45.0% | |
GAAAGTTGTTGCTAAGGTGG+AGG | + | chr8_3:64930853-64930872 | Msa1302360:CDS | 45.0% | |
GTTCAAAATGAGCAAGAGGG+TGG | + | chr8_3:64930890-64930909 | Msa1302360:CDS | 45.0% | |
ATGAGAAGAGGAGGAGACAA+AGG | + | chr8_3:64930918-64930937 | Msa1302360:CDS | 45.0% | |
TGAGAAGAGGAGGAGACAAA+GGG | + | chr8_3:64930919-64930938 | Msa1302360:CDS | 45.0% | |
! | TCGAGGTGTCAATCCATGTA+TGG | - | chr8_3:64931068-64931087 | None:intergenic | 45.0% |
! | TGAAAAGAATCGGCTCTTCG+AGG | - | chr8_3:64931085-64931104 | None:intergenic | 45.0% |
GCCATGAATTTCACACTCTC+TGG | - | chr8_3:64931523-64931542 | None:intergenic | 45.0% | |
! | TACATGGAGCATGATTTGGC+TGG | + | chr8_3:64931646-64931665 | Msa1302360:CDS | 45.0% |
AATTGCGAACCAGGTGACTA+TGG | - | chr8_3:64931825-64931844 | None:intergenic | 45.0% | |
CGGTACGTTAATTAGGTTCG+CGG | + | chr8_3:64931923-64931942 | Msa1302360:intron | 45.0% | |
TGGTCACTGTAAGGACTCAT+TGG | + | chr8_3:64932215-64932234 | Msa1302360:intron | 45.0% | |
GGTCACTGTAAGGACTCATT+GGG | + | chr8_3:64932216-64932235 | Msa1302360:intron | 45.0% | |
ATTCGCAGAAGGTAAGGTAC+CGG | - | chr8_3:64932532-64932551 | None:intergenic | 45.0% | |
TTCGATAAAGAACCGCGAAC+CGG | + | chr8_3:64932577-64932596 | Msa1302360:intron | 45.0% | |
! | TCTGTGACTATGTTCTGGAC+TGG | + | chr8_3:64932642-64932661 | Msa1302360:intron | 45.0% |
ACATCCTATGACTAGTAGGG+TGG | + | chr8_3:64932789-64932808 | Msa1302360:intron | 45.0% | |
GTAACCACCCTACTAGTCAT+AGG | - | chr8_3:64932796-64932815 | None:intergenic | 45.0% | |
AGTGGCTCCAAGAAGAAGTT+CGG | - | chr8_3:64932836-64932855 | None:intergenic | 45.0% | |
! | CTTCTTGGAGCCACTGATTA+TGG | + | chr8_3:64932841-64932860 | Msa1302360:intron | 45.0% |
ATGGTGTAGGAATCGACCTT+TGG | + | chr8_3:64932860-64932879 | Msa1302360:intron | 45.0% | |
TCTGTTCGACCAGGCATAAT+AGG | - | chr8_3:64932925-64932944 | None:intergenic | 45.0% | |
TATTATGCCTGGTCGAACAG+AGG | + | chr8_3:64932924-64932943 | Msa1302360:intron | 45.0% | |
!! | CGGATTTGCTGTAGTCACAA+CGG | + | chr8_3:64932961-64932980 | Msa1302360:intron | 45.0% |
ACCGTCTGATCTCAATCCAA+TGG | - | chr8_3:64932990-64933009 | None:intergenic | 45.0% | |
ATTGGATTGAGATCAGACGG+TGG | + | chr8_3:64932989-64933008 | Msa1302360:intron | 45.0% | |
GTTCCACCTATGAAGCATGA+AGG | - | chr8_3:64933297-64933316 | None:intergenic | 45.0% | |
ACCACTAATTGACACCCTTC+TGG | + | chr8_3:64933465-64933484 | Msa1302360:CDS | 45.0% | |
GGGTTCACAAGCATAAGGTT+GGG | - | chr8_3:64933710-64933729 | None:intergenic | 45.0% | |
AGGGTTCACAAGCATAAGGT+TGG | - | chr8_3:64933711-64933730 | None:intergenic | 45.0% | |
ATATCCTCCCAGTAAGGAGA+TGG | + | chr8_3:64933744-64933763 | Msa1302360:CDS | 45.0% | |
TTCGAGACGAAGAAGCTAGA+AGG | + | chr8_3:64933776-64933795 | Msa1302360:CDS | 45.0% | |
GTTGGCAAAGGTAATGCTGT+TGG | + | chr8_3:64934112-64934131 | Msa1302360:CDS | 45.0% | |
AACTCGTGTCATCACAGAGA+TGG | + | chr8_3:64934299-64934318 | Msa1302360:intron | 45.0% | |
AAAGTTCCATCTTGATGCGG+AGG | - | chr8_3:64934373-64934392 | None:intergenic | 45.0% | |
CCGCATCAAGATGGAACTTT+AGG | + | chr8_3:64934373-64934392 | Msa1302360:CDS | 45.0% | |
GCAAATATTCAGACCTGGTC+CGG | + | chr8_3:64934484-64934503 | Msa1302360:CDS | 45.0% | |
GCCAAGGAGAAAGAAGAACA+AGG | + | chr8_3:64934534-64934553 | Msa1302360:CDS | 45.0% | |
ACTGAGAAAGAAATGGGAGC+AGG | - | chr8_3:64934925-64934944 | None:intergenic | 45.0% | |
TGCTCCCATTTCTTTCTCAG+TGG | + | chr8_3:64934924-64934943 | Msa1302360:three_prime_UTR | 45.0% | |
!!! | AAAAAAGAATATTTTTTATT+TGG | + | chr8_3:64931755-64931774 | Msa1302360:intron | 5.0% |
TGAGACATGGGGTGTGTGTT+TGG | + | chr8_3:64930797-64930816 | Msa1302360:exon | 50.0% | |
GAGACATGGGGTGTGTGTTT+GGG | + | chr8_3:64930798-64930817 | Msa1302360:exon | 50.0% | |
GGGTGTGTGTTTGGGAAAGA+GGG | + | chr8_3:64930806-64930825 | Msa1302360:CDS | 50.0% | |
AGTTGTTGCTAAGGTGGAGG+AGG | + | chr8_3:64930856-64930875 | Msa1302360:CDS | 50.0% | |
AAATGAGCAAGAGGGTGGAG+AGG | + | chr8_3:64930895-64930914 | Msa1302360:CDS | 50.0% | |
AGAGGAGGAGACAAAGGGAA+AGG | + | chr8_3:64930924-64930943 | Msa1302360:CDS | 50.0% | |
GAGGAGACAAAGGGAAAGGA+GGG | + | chr8_3:64930928-64930947 | Msa1302360:CDS | 50.0% | |
ATGGTGAACAAGTGGCTGCA+GGG | + | chr8_3:64931008-64931027 | Msa1302360:CDS | 50.0% | |
GCAACCTTGGAAAGCCAAGA+AGG | - | chr8_3:64931037-64931056 | None:intergenic | 50.0% | |
! | TCTTGGCTTTCCAAGGTTGC+TGG | + | chr8_3:64931037-64931056 | Msa1302360:CDS | 50.0% |
TATGGCTTCTCCAGCAACCT+TGG | - | chr8_3:64931050-64931069 | None:intergenic | 50.0% | |
GTTGCTGGAGAAGCCATACA+TGG | + | chr8_3:64931052-64931071 | Msa1302360:CDS | 50.0% | |
ATTAGTAGTCGCTCGAGAGC+AGG | + | chr8_3:64931173-64931192 | Msa1302360:intron | 50.0% | |
CTTTCTGGACCATAGTCACC+TGG | + | chr8_3:64931813-64931832 | Msa1302360:intron | 50.0% | |
ATTCGCCTTGGTACGTGGTA+CGG | + | chr8_3:64931842-64931861 | Msa1302360:intron | 50.0% | |
GGAGCGTGTGTTTGTGAAGA+TGG | - | chr8_3:64932374-64932393 | None:intergenic | 50.0% | |
TCGCGGTTCTTTATCGAACC+CGG | - | chr8_3:64932575-64932594 | None:intergenic | 50.0% | |
TTCACTGGAGAACCGCGAAT+TGG | - | chr8_3:64932613-64932632 | None:intergenic | 50.0% | |
CGATCTCCCGAACTTCTTCT+TGG | + | chr8_3:64932826-64932845 | Msa1302360:intron | 50.0% | |
GTGGCTCCAAGAAGAAGTTC+GGG | - | chr8_3:64932835-64932854 | None:intergenic | 50.0% | |
! | GGAGCCACTGATTATGGTGT+AGG | + | chr8_3:64932847-64932866 | Msa1302360:intron | 50.0% |
GAATACAGCCAGCACTCCAA+AGG | - | chr8_3:64932879-64932898 | None:intergenic | 50.0% | |
GATCTTACCTCTGTTCGACC+AGG | - | chr8_3:64932934-64932953 | None:intergenic | 50.0% | |
GTAGTCACAACGGTGACCAT+TGG | + | chr8_3:64932971-64932990 | Msa1302360:intron | 50.0% | |
TCACACAGTCAACACATCGG+TGG | - | chr8_3:64933100-64933119 | None:intergenic | 50.0% | |
!! | GTGTTGACTGTGTGAATGCG+TGG | + | chr8_3:64933105-64933124 | Msa1302360:intron | 50.0% |
!! | GCCAGAAGGGTGTCAATTAG+TGG | - | chr8_3:64933469-64933488 | None:intergenic | 50.0% |
AGCTGGATCGATTGCCAGAA+GGG | - | chr8_3:64933482-64933501 | None:intergenic | 50.0% | |
GTATCCATCTCCTTACTGGG+AGG | - | chr8_3:64933751-64933770 | None:intergenic | 50.0% | |
!! | TCAGCATTGACCTCTGGAAC+TGG | - | chr8_3:64934181-64934200 | None:intergenic | 50.0% |
GTCATCACAGAGATGGAGAC+TGG | + | chr8_3:64934306-64934325 | Msa1302360:intron | 50.0% | |
TTTCCTCCTCCGCATCAAGA+TGG | + | chr8_3:64934364-64934383 | Msa1302360:CDS | 50.0% | |
GGGGTGTGTGTTTGGGAAAG+AGG | + | chr8_3:64930805-64930824 | Msa1302360:CDS | 55.0% | |
AGGGTGGAGAGGATGAGAAG+AGG | + | chr8_3:64930906-64930925 | Msa1302360:CDS | 55.0% | |
GTGGAGAGGATGAGAAGAGG+AGG | + | chr8_3:64930909-64930928 | Msa1302360:CDS | 55.0% | |
GGAGGAGACAAAGGGAAAGG+AGG | + | chr8_3:64930927-64930946 | Msa1302360:CDS | 55.0% | |
GACAAAGGGAAAGGAGGGAG+AGG | + | chr8_3:64930933-64930952 | Msa1302360:CDS | 55.0% | |
AAAGGGAAAGGAGGGAGAGG+AGG | + | chr8_3:64930936-64930955 | Msa1302360:CDS | 55.0% | |
CATGGTGAACAAGTGGCTGC+AGG | + | chr8_3:64931007-64931026 | Msa1302360:CDS | 55.0% | |
! | GTGGCCTTCTTGGCTTTCCA+AGG | + | chr8_3:64931030-64931049 | Msa1302360:CDS | 55.0% |
! | ACCTGGTTCGCAATTCGCCT+TGG | + | chr8_3:64931830-64931849 | Msa1302360:intron | 55.0% |
ACCAAGGCGAATTGCGAACC+AGG | - | chr8_3:64931834-64931853 | None:intergenic | 55.0% | |
TCGCAATTCGCCTTGGTACG+TGG | + | chr8_3:64931837-64931856 | Msa1302360:intron | 55.0% | |
TTCGCCTTGGTACGTGGTAC+GGG | + | chr8_3:64931843-64931862 | Msa1302360:intron | 55.0% | |
CTTGGTACGTGGTACGGGTT+CGG | + | chr8_3:64931848-64931867 | Msa1302360:intron | 55.0% | |
TTGGTACGTGGTACGGGTTC+GGG | + | chr8_3:64931849-64931868 | Msa1302360:intron | 55.0% | |
!! | GCGAATTGGTTCGCACGAAC+CGG | - | chr8_3:64932599-64932618 | None:intergenic | 55.0% |
GGTTCGTGCGAACCAATTCG+CGG | + | chr8_3:64932598-64932617 | Msa1302360:intron | 55.0% | |
!! | GGAATCGACCTTTGGAGTGC+TGG | + | chr8_3:64932868-64932887 | Msa1302360:intron | 55.0% |
GCTGGAAGGCCTATTATGCC+TGG | + | chr8_3:64932913-64932932 | Msa1302360:intron | 55.0% | |
GGTGGCCGTTGAATCATGAC+AGG | - | chr8_3:64933082-64933101 | None:intergenic | 55.0% | |
CAGCTGGATCGATTGCCAGA+AGG | - | chr8_3:64933483-64933502 | None:intergenic | 55.0% | |
GTGGCAGTTTGACGTTCAGC+TGG | - | chr8_3:64933499-64933518 | None:intergenic | 55.0% | |
TTCGCTGTGCAATGCAGCAG+TGG | - | chr8_3:64933518-64933537 | None:intergenic | 55.0% | |
TCTCGTTCGCGTGATCGAAG+TGG | + | chr8_3:64934145-64934164 | Msa1302360:CDS | 55.0% | |
CTCGTTCGCGTGATCGAAGT+GGG | + | chr8_3:64934146-64934165 | Msa1302360:CDS | 55.0% | |
TTCGCGTGATCGAAGTGGGA+GGG | + | chr8_3:64934150-64934169 | Msa1302360:CDS | 55.0% | |
GAGGGGAATTCCAGTTCCAG+AGG | + | chr8_3:64934168-64934187 | Msa1302360:CDS | 55.0% | |
!! | TGCAGCTCAGCATTGACCTC+TGG | - | chr8_3:64934187-64934206 | None:intergenic | 55.0% |
GTTCCATCTTGATGCGGAGG+AGG | - | chr8_3:64934370-64934389 | None:intergenic | 55.0% | |
TCACCCTCGGTTCCACCAAT+GGG | - | chr8_3:64934510-64934529 | None:intergenic | 55.0% | |
GTGAACAAGTGGCTGCAGGG+TGG | + | chr8_3:64931011-64931030 | Msa1302360:CDS | 60.0% | |
CGAACCCGTACCACGTACCA+AGG | - | chr8_3:64931850-64931869 | None:intergenic | 60.0% | |
CTAACACACACACGCGCGCA+TGG | + | chr8_3:64933857-64933876 | Msa1302360:intron | 60.0% | |
GTTCGCGTGATCGAAGTGGG+AGG | + | chr8_3:64934149-64934168 | Msa1302360:CDS | 60.0% | |
TCGCGTGATCGAAGTGGGAG+GGG | + | chr8_3:64934151-64934170 | Msa1302360:CDS | 60.0% | |
CTCACCCTCGGTTCCACCAA+TGG | - | chr8_3:64934511-64934530 | None:intergenic | 60.0% | |
TGGCTGCAGGGTGGCCTTCT+TGG | + | chr8_3:64931020-64931039 | Msa1302360:CDS | 65.0% | |
GTGGTACGGGTTCGGGTACG+CGG | + | chr8_3:64931856-64931875 | Msa1302360:intron | 65.0% | |
!! | GGTTCGCACGAACCGGTTCG+CGG | - | chr8_3:64932592-64932611 | None:intergenic | 65.0% |
ACACACACACGCGCGCATGG+CGG | + | chr8_3:64933860-64933879 | Msa1302360:intron | 65.0% | |
TCAGACCTGGTCCGGCCCAT+TGG | + | chr8_3:64934492-64934511 | Msa1302360:CDS | 65.0% | |
TTCCACCAATGGGCCGGACC+AGG | - | chr8_3:64934500-64934519 | None:intergenic | 65.0% | |
CCTCGGTTCCACCAATGGGC+CGG | - | chr8_3:64934506-64934525 | None:intergenic | 65.0% | |
CGGCCCATTGGTGGAACCGA+GGG | + | chr8_3:64934504-64934523 | Msa1302360:CDS | 65.0% | |
AACCGAGGGTGAGTGCGCCA+AGG | + | chr8_3:64934518-64934537 | Msa1302360:CDS | 65.0% | |
CTCCTTGGCGCACTCACCCT+CGG | - | chr8_3:64934523-64934542 | None:intergenic | 65.0% | |
GACCTGGTCCGGCCCATTGG+TGG | + | chr8_3:64934495-64934514 | Msa1302360:CDS | 70.0% | |
CCGGCCCATTGGTGGAACCG+AGG | + | chr8_3:64934503-64934522 | Msa1302360:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 64930665 | 64935039 | 64930665 | ID=Msa1302360;Name=Msa1302360 |
chr8_3 | mRNA | 64930665 | 64935039 | 64930665 | ID=Msa1302360-mRNA-1;Parent=Msa1302360;Name=Msa1302360-mRNA-1;_AED=0.18;_eAED=0.18;_QI=138|1|1|1|1|1|6|430|446 |
chr8_3 | exon | 64930665 | 64931117 | 64930665 | ID=Msa1302360-mRNA-1:exon:19649;Parent=Msa1302360-mRNA-1 |
chr8_3 | exon | 64931424 | 64931708 | 64931424 | ID=Msa1302360-mRNA-1:exon:19650;Parent=Msa1302360-mRNA-1 |
chr8_3 | exon | 64933310 | 64933537 | 64933310 | ID=Msa1302360-mRNA-1:exon:19651;Parent=Msa1302360-mRNA-1 |
chr8_3 | exon | 64933697 | 64933797 | 64933697 | ID=Msa1302360-mRNA-1:exon:19652;Parent=Msa1302360-mRNA-1 |
chr8_3 | exon | 64934102 | 64934219 | 64934102 | ID=Msa1302360-mRNA-1:exon:19653;Parent=Msa1302360-mRNA-1 |
chr8_3 | exon | 64934316 | 64935039 | 64934316 | ID=Msa1302360-mRNA-1:exon:19654;Parent=Msa1302360-mRNA-1 |
chr8_3 | five_prime_UTR | 64930665 | 64930802 | 64930665 | ID=Msa1302360-mRNA-1:five_prime_utr;Parent=Msa1302360-mRNA-1 |
chr8_3 | CDS | 64930803 | 64931117 | 64930803 | ID=Msa1302360-mRNA-1:cds;Parent=Msa1302360-mRNA-1 |
chr8_3 | CDS | 64931424 | 64931708 | 64931424 | ID=Msa1302360-mRNA-1:cds;Parent=Msa1302360-mRNA-1 |
chr8_3 | CDS | 64933310 | 64933537 | 64933310 | ID=Msa1302360-mRNA-1:cds;Parent=Msa1302360-mRNA-1 |
chr8_3 | CDS | 64933697 | 64933797 | 64933697 | ID=Msa1302360-mRNA-1:cds;Parent=Msa1302360-mRNA-1 |
chr8_3 | CDS | 64934102 | 64934219 | 64934102 | ID=Msa1302360-mRNA-1:cds;Parent=Msa1302360-mRNA-1 |
chr8_3 | CDS | 64934316 | 64934609 | 64934316 | ID=Msa1302360-mRNA-1:cds;Parent=Msa1302360-mRNA-1 |
chr8_3 | three_prime_UTR | 64934610 | 64935039 | 64934610 | ID=Msa1302360-mRNA-1:three_prime_utr;Parent=Msa1302360-mRNA-1 |
Gene Sequence |
Protein sequence |