Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303860 | AES92175.2 | 75.194 | 129 | 21 | 2 | 1 | 121 | 1 | 126 | 2.16e-55 | 179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303860 | sp|Q8H395|TI10B_ORYSJ | 36.810 | 163 | 65 | 6 | 1 | 129 | 71 | 229 | 1.35e-19 | 84.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303860 | G7JS77 | 75.194 | 129 | 21 | 2 | 1 | 121 | 1 | 126 | 1.03e-55 | 179 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1303860 | TF | Tify |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303860 | MtrunA17_Chr4g0070271 | 70.000 | 130 | 38 | 1 | 1 | 129 | 67 | 196 | 1.37e-55 | 172 |
| Msa1303860 | MtrunA17_Chr4g0070241 | 92.188 | 64 | 5 | 0 | 1 | 64 | 1 | 64 | 4.70e-37 | 121 |
| Msa1303860 | MtrunA17_Chr2g0301131 | 38.122 | 181 | 53 | 6 | 1 | 129 | 72 | 245 | 3.39e-28 | 103 |
| Msa1303860 | MtrunA17_Chr5g0399851 | 36.434 | 129 | 58 | 3 | 25 | 129 | 11 | 139 | 9.42e-20 | 79.3 |
| Msa1303860 | MtrunA17_Chr5g0399881 | 38.562 | 153 | 64 | 6 | 7 | 129 | 5 | 157 | 8.00e-19 | 77.4 |
| Msa1303860 | MtrunA17_Chr5g0399861 | 35.526 | 152 | 69 | 4 | 7 | 129 | 5 | 156 | 1.05e-17 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303860 | AT1G19180.2 | 35.256 | 156 | 66 | 4 | 2 | 122 | 17 | 172 | 5.16e-17 | 73.6 |
| Msa1303860 | AT1G19180.1 | 35.256 | 156 | 66 | 4 | 2 | 122 | 83 | 238 | 8.89e-17 | 74.3 |
| Msa1303860 | AT1G19180.3 | 35.256 | 156 | 66 | 4 | 2 | 122 | 83 | 238 | 8.89e-17 | 74.3 |
Find 23 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTCACTTCTTCGATTCA+TGG | 0.237608 | 8_3:-67168591 | Msa1303860:CDS |
| AATGTCAACTGTGCAGTTTC+CGG | 0.323565 | 8_3:+67168885 | None:intergenic |
| TTTAGCACCTAAAACAAGTA+TGG | 0.324800 | 8_3:+67167745 | None:intergenic |
| TCGGAATCGCTTCTTTGATA+TGG | 0.333476 | 8_3:+67167799 | None:intergenic |
| CAACCACCTCCTACACTAAC+TGG | 0.374106 | 8_3:-67168747 | Msa1303860:intron |
| TAATGGAGAAGTTATTGTAT+TGG | 0.400656 | 8_3:-67168856 | Msa1303860:CDS |
| GCTTCTTTGATATGGTGATT+TGG | 0.408539 | 8_3:+67167807 | None:intergenic |
| TAACTCAATGGTTAACAAAC+CGG | 0.425259 | 8_3:-67168904 | Msa1303860:CDS |
| GGTGGTTGAAGACTCATATC+AGG | 0.439597 | 8_3:+67168762 | None:intergenic |
| AGCTCCTCAACTTTGTCAGC+AGG | 0.455494 | 8_3:+67168825 | None:intergenic |
| TTACAGAACTAATAACTCAA+TGG | 0.476118 | 8_3:-67168916 | Msa1303860:intron |
| TTCTTCGATTCATGGAGAAA+AGG | 0.478429 | 8_3:-67168583 | Msa1303860:CDS |
| CAATTACCAGTTAGTGTAGG+AGG | 0.522487 | 8_3:+67168741 | None:intergenic |
| CTGTGGATTCTTTGTCTCCA+AGG | 0.531713 | 8_3:-67169060 | Msa1303860:intron |
| TCATGGAGAAAAGGAAAGCC+AGG | 0.536399 | 8_3:-67168574 | Msa1303860:intron |
| CATTTGCAAGCACTCAAACT+CGG | 0.560353 | 8_3:-67168797 | Msa1303860:CDS |
| AAGTATGGAGTGGATTCAGT+AGG | 0.584677 | 8_3:+67167760 | None:intergenic |
| CACCTAAAACAAGTATGGAG+TGG | 0.594681 | 8_3:+67167750 | None:intergenic |
| CTCATATCAGGAATAACTGA+AGG | 0.598557 | 8_3:+67168774 | None:intergenic |
| GTTTGTGGGAAATAAGTCCA+TGG | 0.603000 | 8_3:+67169105 | None:intergenic |
| TTACCAGTTAGTGTAGGAGG+TGG | 0.608915 | 8_3:+67168744 | None:intergenic |
| GAGCAATTACCAGTTAGTGT+AGG | 0.610011 | 8_3:+67168738 | None:intergenic |
| CTTGGAGACAAAGAATCCAC+AGG | 0.648213 | 8_3:+67169061 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATATTTTGAAACAAATAA+AGG | - | chr8_3:67168153-67168172 | Msa1303860:intron | 10.0% |
| !!! | TAATATTTTGAAACAAATAA+AGG | - | chr8_3:67168153-67168172 | Msa1303860:intron | 10.0% |
| !!! | AAGGAAATATTTTTTGTATT+AGG | - | chr8_3:67168172-67168191 | Msa1303860:intron | 15.0% |
| !!! | AGGAAATATTTTTTGTATTA+GGG | - | chr8_3:67168173-67168192 | Msa1303860:intron | 15.0% |
| !! | AAGAAATAAAATTTATGATC+AGG | + | chr8_3:67168218-67168237 | None:intergenic | 15.0% |
| !!! | TTATTTCTTTAAAGAAGATA+TGG | - | chr8_3:67168229-67168248 | Msa1303860:intron | 15.0% |
| !!! | TAAATTCAAGTTTTTATTCA+AGG | - | chr8_3:67168323-67168342 | Msa1303860:intron | 15.0% |
| !!! | ATTATGAATATTTTGATTAC+CGG | + | chr8_3:67168554-67168573 | None:intergenic | 15.0% |
| !!! | AAGGAAATATTTTTTGTATT+AGG | - | chr8_3:67168172-67168191 | Msa1303860:intron | 15.0% |
| !!! | AGGAAATATTTTTTGTATTA+GGG | - | chr8_3:67168173-67168192 | Msa1303860:intron | 15.0% |
| !! | AAGAAATAAAATTTATGATC+AGG | + | chr8_3:67168218-67168237 | None:intergenic | 15.0% |
| !!! | TTATTTCTTTAAAGAAGATA+TGG | - | chr8_3:67168229-67168248 | Msa1303860:intron | 15.0% |
| !!! | TAAATTCAAGTTTTTATTCA+AGG | - | chr8_3:67168323-67168342 | Msa1303860:intron | 15.0% |
| !!! | ATTATGAATATTTTGATTAC+CGG | + | chr8_3:67168554-67168573 | None:intergenic | 15.0% |
| !! | TAACAGTAACACTATATATT+AGG | + | chr8_3:67168999-67169018 | None:intergenic | 20.0% |
| !! | TAACAGTAACACTATATATT+AGG | + | chr8_3:67168999-67169018 | None:intergenic | 20.0% |
| ! | TTACAGAACTAATAACTCAA+TGG | - | chr8_3:67167940-67167959 | Msa1303860:intron | 25.0% |
| !!! | CAGTTGACATTGTTTTATAA+TGG | - | chr8_3:67167983-67168002 | Msa1303860:intron | 25.0% |
| ! | TAATGGAGAAGTTATTGTAT+TGG | - | chr8_3:67168000-67168019 | Msa1303860:intron | 25.0% |
| !!! | TTGAATTTAATTTGTCTGAG+AGG | + | chr8_3:67168312-67168331 | None:intergenic | 25.0% |
| ! | TTGTTTCAACATTTCAATCA+AGG | + | chr8_3:67168438-67168457 | None:intergenic | 25.0% |
| !!! | GTAAAATGTGATTTTTGAGA+TGG | + | chr8_3:67168787-67168806 | None:intergenic | 25.0% |
| ! | GTAACACTATATATTAGGTT+AGG | + | chr8_3:67168994-67169013 | None:intergenic | 25.0% |
| ! | TTACAGAACTAATAACTCAA+TGG | - | chr8_3:67167940-67167959 | Msa1303860:intron | 25.0% |
| !!! | CAGTTGACATTGTTTTATAA+TGG | - | chr8_3:67167983-67168002 | Msa1303860:intron | 25.0% |
| ! | TAATGGAGAAGTTATTGTAT+TGG | - | chr8_3:67168000-67168019 | Msa1303860:intron | 25.0% |
| !!! | TTGAATTTAATTTGTCTGAG+AGG | + | chr8_3:67168312-67168331 | None:intergenic | 25.0% |
| ! | TTGTTTCAACATTTCAATCA+AGG | + | chr8_3:67168438-67168457 | None:intergenic | 25.0% |
| !!! | GTAAAATGTGATTTTTGAGA+TGG | + | chr8_3:67168787-67168806 | None:intergenic | 25.0% |
| ! | GTAACACTATATATTAGGTT+AGG | + | chr8_3:67168994-67169013 | None:intergenic | 25.0% |
| TAACTCAATGGTTAACAAAC+CGG | - | chr8_3:67167952-67167971 | Msa1303860:intron | 30.0% | |
| GTTGTCGTAACTTTGTAATT+TGG | - | chr8_3:67168681-67168700 | Msa1303860:intron | 30.0% | |
| !! | AGTAGTTGATGATATGCATA+AGG | + | chr8_3:67168754-67168773 | None:intergenic | 30.0% |
| !! | TCAATTTCTAGTAACACAAG+TGG | + | chr8_3:67168856-67168875 | None:intergenic | 30.0% |
| TAACTCAATGGTTAACAAAC+CGG | - | chr8_3:67167952-67167971 | Msa1303860:intron | 30.0% | |
| GTTGTCGTAACTTTGTAATT+TGG | - | chr8_3:67168681-67168700 | Msa1303860:intron | 30.0% | |
| !! | AGTAGTTGATGATATGCATA+AGG | + | chr8_3:67168754-67168773 | None:intergenic | 30.0% |
| !! | TCAATTTCTAGTAACACAAG+TGG | + | chr8_3:67168856-67168875 | None:intergenic | 30.0% |
| !!! | TTTTTTGGTGTCACGTTTGT+GGG | + | chr8_3:67167768-67167787 | None:intergenic | 35.0% |
| ! | AGAAGCACAAAAACATACCT+TGG | + | chr8_3:67167816-67167835 | None:intergenic | 35.0% |
| !!! | TTTTTTGCACACAAGCAATG+GGG | + | chr8_3:67167877-67167896 | None:intergenic | 35.0% |
| !!! | CTTTTTTGCACACAAGCAAT+GGG | + | chr8_3:67167878-67167897 | None:intergenic | 35.0% |
| !!! | ACTTTTTTGCACACAAGCAA+TGG | + | chr8_3:67167879-67167898 | None:intergenic | 35.0% |
| CTCATATCAGGAATAACTGA+AGG | + | chr8_3:67168085-67168104 | None:intergenic | 35.0% | |
| TTCTTCGATTCATGGAGAAA+AGG | - | chr8_3:67168273-67168292 | Msa1303860:intron | 35.0% | |
| !!! | CAACTTTCGTGTTGTTTTCA+CGG | + | chr8_3:67168665-67168684 | None:intergenic | 35.0% |
| TAGAATTGGATGGAATCAGT+TGG | + | chr8_3:67168813-67168832 | None:intergenic | 35.0% | |
| ! | AACTGATTCCATCCAATTCT+AGG | - | chr8_3:67168812-67168831 | Msa1303860:CDS | 35.0% |
| ACTGCAAAGTAAGTAACAAG+AGG | + | chr8_3:67168948-67168967 | None:intergenic | 35.0% | |
| ATTTCCTGAGTGATGTTGTT+TGG | - | chr8_3:67168968-67168987 | Msa1303860:intron | 35.0% | |
| GCTTCTTTGATATGGTGATT+TGG | + | chr8_3:67169052-67169071 | None:intergenic | 35.0% | |
| !!! | GTGGATTCAGTAGGTTTTTT+TGG | + | chr8_3:67169090-67169109 | None:intergenic | 35.0% |
| !!! | TTTTTTGGTGTCACGTTTGT+GGG | + | chr8_3:67167768-67167787 | None:intergenic | 35.0% |
| ! | AGAAGCACAAAAACATACCT+TGG | + | chr8_3:67167816-67167835 | None:intergenic | 35.0% |
| !!! | TTTTTTGCACACAAGCAATG+GGG | + | chr8_3:67167877-67167896 | None:intergenic | 35.0% |
| !!! | CTTTTTTGCACACAAGCAAT+GGG | + | chr8_3:67167878-67167897 | None:intergenic | 35.0% |
| !!! | ACTTTTTTGCACACAAGCAA+TGG | + | chr8_3:67167879-67167898 | None:intergenic | 35.0% |
| CTCATATCAGGAATAACTGA+AGG | + | chr8_3:67168085-67168104 | None:intergenic | 35.0% | |
| TTCTTCGATTCATGGAGAAA+AGG | - | chr8_3:67168273-67168292 | Msa1303860:intron | 35.0% | |
| !!! | CAACTTTCGTGTTGTTTTCA+CGG | + | chr8_3:67168665-67168684 | None:intergenic | 35.0% |
| TAGAATTGGATGGAATCAGT+TGG | + | chr8_3:67168813-67168832 | None:intergenic | 35.0% | |
| ! | AACTGATTCCATCCAATTCT+AGG | - | chr8_3:67168812-67168831 | Msa1303860:CDS | 35.0% |
| ACTGCAAAGTAAGTAACAAG+AGG | + | chr8_3:67168948-67168967 | None:intergenic | 35.0% | |
| ATTTCCTGAGTGATGTTGTT+TGG | - | chr8_3:67168968-67168987 | Msa1303860:intron | 35.0% | |
| GCTTCTTTGATATGGTGATT+TGG | + | chr8_3:67169052-67169071 | None:intergenic | 35.0% | |
| !!! | GTGGATTCAGTAGGTTTTTT+TGG | + | chr8_3:67169090-67169109 | None:intergenic | 35.0% |
| !!! | GTTTTTTGGTGTCACGTTTG+TGG | + | chr8_3:67167769-67167788 | None:intergenic | 40.0% |
| ACCAAAAAACGTTACACCTG+TGG | - | chr8_3:67167779-67167798 | Msa1303860:CDS | 40.0% | |
| !!! | TCCACAGGTGTAACGTTTTT+TGG | + | chr8_3:67167783-67167802 | None:intergenic | 40.0% |
| GCAATGGGGCAAAACAAAAA+TGG | + | chr8_3:67167863-67167882 | None:intergenic | 40.0% | |
| AATGTCAACTGTGCAGTTTC+CGG | + | chr8_3:67167974-67167993 | None:intergenic | 40.0% | |
| ! | TTTTCCTGCTGACAAAGTTG+AGG | - | chr8_3:67168027-67168046 | Msa1303860:intron | 40.0% |
| CATTTGCAAGCACTCAAACT+CGG | - | chr8_3:67168059-67168078 | Msa1303860:intron | 40.0% | |
| CAATTACCAGTTAGTGTAGG+AGG | + | chr8_3:67168118-67168137 | None:intergenic | 40.0% | |
| GAGCAATTACCAGTTAGTGT+AGG | + | chr8_3:67168121-67168140 | None:intergenic | 40.0% | |
| AGCTTCACTTCTTCGATTCA+TGG | - | chr8_3:67168265-67168284 | Msa1303860:intron | 40.0% | |
| ATAGACAGAGACATGGAGAA+GGG | + | chr8_3:67168415-67168434 | None:intergenic | 40.0% | |
| ATCAAGGATAGACAGAGACA+TGG | + | chr8_3:67168422-67168441 | None:intergenic | 40.0% | |
| CAAGCAAAATCAAGGACTTC+CGG | - | chr8_3:67168532-67168551 | Msa1303860:intron | 40.0% | |
| CACTATTTATGTTCCTCTCG+TGG | + | chr8_3:67168600-67168619 | None:intergenic | 40.0% | |
| TTGTGCTCATGCTCTTACAA+GGG | + | chr8_3:67168626-67168645 | None:intergenic | 40.0% | |
| !!! | TTCGTGTTGTTTTCACGGTA+CGG | + | chr8_3:67168660-67168679 | None:intergenic | 40.0% |
| TCTAGTAACACAAGTGGCTT+TGG | + | chr8_3:67168850-67168869 | None:intergenic | 40.0% | |
| CTCTAGTCCATTGTGCAAAT+TGG | - | chr8_3:67168918-67168937 | Msa1303860:intron | 40.0% | |
| AGGCAAACCAATTTGCACAA+TGG | + | chr8_3:67168928-67168947 | None:intergenic | 40.0% | |
| TCGGAATCGCTTCTTTGATA+TGG | + | chr8_3:67169060-67169079 | None:intergenic | 40.0% | |
| !!! | AGGTTTTTTTGGAGCAGAGT+CGG | + | chr8_3:67169079-67169098 | None:intergenic | 40.0% |
| ! | AAGTATGGAGTGGATTCAGT+AGG | + | chr8_3:67169099-67169118 | None:intergenic | 40.0% |
| !!! | GTTTTTTGGTGTCACGTTTG+TGG | + | chr8_3:67167769-67167788 | None:intergenic | 40.0% |
| ACCAAAAAACGTTACACCTG+TGG | - | chr8_3:67167779-67167798 | Msa1303860:CDS | 40.0% | |
| !!! | TCCACAGGTGTAACGTTTTT+TGG | + | chr8_3:67167783-67167802 | None:intergenic | 40.0% |
| GCAATGGGGCAAAACAAAAA+TGG | + | chr8_3:67167863-67167882 | None:intergenic | 40.0% | |
| AATGTCAACTGTGCAGTTTC+CGG | + | chr8_3:67167974-67167993 | None:intergenic | 40.0% | |
| ! | TTTTCCTGCTGACAAAGTTG+AGG | - | chr8_3:67168027-67168046 | Msa1303860:intron | 40.0% |
| CATTTGCAAGCACTCAAACT+CGG | - | chr8_3:67168059-67168078 | Msa1303860:intron | 40.0% | |
| CAATTACCAGTTAGTGTAGG+AGG | + | chr8_3:67168118-67168137 | None:intergenic | 40.0% | |
| GAGCAATTACCAGTTAGTGT+AGG | + | chr8_3:67168121-67168140 | None:intergenic | 40.0% | |
| AGCTTCACTTCTTCGATTCA+TGG | - | chr8_3:67168265-67168284 | Msa1303860:intron | 40.0% | |
| ATAGACAGAGACATGGAGAA+GGG | + | chr8_3:67168415-67168434 | None:intergenic | 40.0% | |
| ATCAAGGATAGACAGAGACA+TGG | + | chr8_3:67168422-67168441 | None:intergenic | 40.0% | |
| CAAGCAAAATCAAGGACTTC+CGG | - | chr8_3:67168532-67168551 | Msa1303860:intron | 40.0% | |
| CACTATTTATGTTCCTCTCG+TGG | + | chr8_3:67168600-67168619 | None:intergenic | 40.0% | |
| TTGTGCTCATGCTCTTACAA+GGG | + | chr8_3:67168626-67168645 | None:intergenic | 40.0% | |
| !!! | TTCGTGTTGTTTTCACGGTA+CGG | + | chr8_3:67168660-67168679 | None:intergenic | 40.0% |
| TCTAGTAACACAAGTGGCTT+TGG | + | chr8_3:67168850-67168869 | None:intergenic | 40.0% | |
| CTCTAGTCCATTGTGCAAAT+TGG | - | chr8_3:67168918-67168937 | Msa1303860:intron | 40.0% | |
| AGGCAAACCAATTTGCACAA+TGG | + | chr8_3:67168928-67168947 | None:intergenic | 40.0% | |
| TCGGAATCGCTTCTTTGATA+TGG | + | chr8_3:67169060-67169079 | None:intergenic | 40.0% | |
| !!! | AGGTTTTTTTGGAGCAGAGT+CGG | + | chr8_3:67169079-67169098 | None:intergenic | 40.0% |
| ! | AAGTATGGAGTGGATTCAGT+AGG | + | chr8_3:67169099-67169118 | None:intergenic | 40.0% |
| CTTGGAGACAAAGAATCCAC+AGG | + | chr8_3:67167798-67167817 | None:intergenic | 45.0% | |
| CTGTGGATTCTTTGTCTCCA+AGG | - | chr8_3:67167796-67167815 | Msa1303860:CDS | 45.0% | |
| GGTGGTTGAAGACTCATATC+AGG | + | chr8_3:67168097-67168116 | None:intergenic | 45.0% | |
| TTACCAGTTAGTGTAGGAGG+TGG | + | chr8_3:67168115-67168134 | None:intergenic | 45.0% | |
| TCATGGAGAAAAGGAAAGCC+AGG | - | chr8_3:67168282-67168301 | Msa1303860:intron | 45.0% | |
| ! | ATTTGTCTGAGAGGCATACC+TGG | + | chr8_3:67168303-67168322 | None:intergenic | 45.0% |
| GATAGACAGAGACATGGAGA+AGG | + | chr8_3:67168416-67168435 | None:intergenic | 45.0% | |
| ! | CTTGATTTTGCTTGCGTCGA+AGG | + | chr8_3:67168526-67168545 | None:intergenic | 45.0% |
| CTTCGACGCAAGCAAAATCA+AGG | - | chr8_3:67168524-67168543 | Msa1303860:intron | 45.0% | |
| TCATAGTCAAGAACCACGAG+AGG | - | chr8_3:67168584-67168603 | Msa1303860:CDS | 45.0% | |
| GTTGTGCTCATGCTCTTACA+AGG | + | chr8_3:67168627-67168646 | None:intergenic | 45.0% | |
| TCAGCAAGCCTAGAATTGGA+TGG | + | chr8_3:67168823-67168842 | None:intergenic | 45.0% | |
| CTCTTCAGCAAGCCTAGAAT+TGG | + | chr8_3:67168827-67168846 | None:intergenic | 45.0% | |
| TAGGCCAAACAACATCACTC+AGG | + | chr8_3:67168975-67168994 | None:intergenic | 45.0% | |
| CTTGGAGACAAAGAATCCAC+AGG | + | chr8_3:67167798-67167817 | None:intergenic | 45.0% | |
| CTGTGGATTCTTTGTCTCCA+AGG | - | chr8_3:67167796-67167815 | Msa1303860:CDS | 45.0% | |
| GGTGGTTGAAGACTCATATC+AGG | + | chr8_3:67168097-67168116 | None:intergenic | 45.0% | |
| TTACCAGTTAGTGTAGGAGG+TGG | + | chr8_3:67168115-67168134 | None:intergenic | 45.0% | |
| TCATGGAGAAAAGGAAAGCC+AGG | - | chr8_3:67168282-67168301 | Msa1303860:intron | 45.0% | |
| ! | ATTTGTCTGAGAGGCATACC+TGG | + | chr8_3:67168303-67168322 | None:intergenic | 45.0% |
| GATAGACAGAGACATGGAGA+AGG | + | chr8_3:67168416-67168435 | None:intergenic | 45.0% | |
| ! | CTTGATTTTGCTTGCGTCGA+AGG | + | chr8_3:67168526-67168545 | None:intergenic | 45.0% |
| CTTCGACGCAAGCAAAATCA+AGG | - | chr8_3:67168524-67168543 | Msa1303860:intron | 45.0% | |
| TCATAGTCAAGAACCACGAG+AGG | - | chr8_3:67168584-67168603 | Msa1303860:CDS | 45.0% | |
| GTTGTGCTCATGCTCTTACA+AGG | + | chr8_3:67168627-67168646 | None:intergenic | 45.0% | |
| TCAGCAAGCCTAGAATTGGA+TGG | + | chr8_3:67168823-67168842 | None:intergenic | 45.0% | |
| CTCTTCAGCAAGCCTAGAAT+TGG | + | chr8_3:67168827-67168846 | None:intergenic | 45.0% | |
| TAGGCCAAACAACATCACTC+AGG | + | chr8_3:67168975-67168994 | None:intergenic | 45.0% | |
| AGCTCCTCAACTTTGTCAGC+AGG | + | chr8_3:67168034-67168053 | None:intergenic | 50.0% | |
| CAACCACCTCCTACACTAAC+TGG | - | chr8_3:67168109-67168128 | Msa1303860:intron | 50.0% | |
| AGCTCCTCAACTTTGTCAGC+AGG | + | chr8_3:67168034-67168053 | None:intergenic | 50.0% | |
| CAACCACCTCCTACACTAAC+TGG | - | chr8_3:67168109-67168128 | Msa1303860:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 67167753 | 67169125 | 67167753 | ID=Msa1303860;Name=Msa1303860 |
| chr8_3 | mRNA | 67167753 | 67169125 | 67167753 | ID=Msa1303860-mRNA-1;Parent=Msa1303860;Name=Msa1303860-mRNA-1;_AED=0.52;_eAED=0.52;_QI=0|0|0|0.75|1|1|4|0|130 |
| chr8_3 | exon | 67169061 | 67169125 | 67169061 | ID=Msa1303860-mRNA-1:exon:20536;Parent=Msa1303860-mRNA-1 |
| chr8_3 | exon | 67168748 | 67168932 | 67168748 | ID=Msa1303860-mRNA-1:exon:20535;Parent=Msa1303860-mRNA-1 |
| chr8_3 | exon | 67168575 | 67168632 | 67168575 | ID=Msa1303860-mRNA-1:exon:20534;Parent=Msa1303860-mRNA-1 |
| chr8_3 | exon | 67167753 | 67167837 | 67167753 | ID=Msa1303860-mRNA-1:exon:20533;Parent=Msa1303860-mRNA-1 |
| chr8_3 | CDS | 67169061 | 67169125 | 67169061 | ID=Msa1303860-mRNA-1:cds;Parent=Msa1303860-mRNA-1 |
| chr8_3 | CDS | 67168748 | 67168932 | 67168748 | ID=Msa1303860-mRNA-1:cds;Parent=Msa1303860-mRNA-1 |
| chr8_3 | CDS | 67168575 | 67168632 | 67168575 | ID=Msa1303860-mRNA-1:cds;Parent=Msa1303860-mRNA-1 |
| chr8_3 | CDS | 67167753 | 67167837 | 67167753 | ID=Msa1303860-mRNA-1:cds;Parent=Msa1303860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
