AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1306290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1306290 MtrunA17_Chr3g0139671 66.667 147 49 0 34 180 23 169 6.58e-67 219
Msa1306290 MtrunA17_Chr1g0157731 66.667 147 49 0 34 180 29 175 1.29e-66 219
Msa1306290 MtrunA17_Chr7g0238631 61.783 157 59 1 24 180 42 197 2.25e-64 207
Msa1306290 MtrunA17_Chr5g0397841 57.042 142 58 1 42 180 53 194 2.63e-51 171
Msa1306290 MtrunA17_Chr3g0117511 59.091 88 36 0 93 180 180 267 1.24e-29 112
Msa1306290 MtrunA17_Chr3g0117511 41.053 95 55 1 44 138 183 276 6.42e-16 74.7
Msa1306290 MtrunA17_Chr5g0429661 58.621 87 36 0 94 180 120 206 2.22e-29 110
Msa1306290 MtrunA17_Chr5g0429661 39.583 96 55 2 44 138 122 215 2.84e-15 72.4
Msa1306290 MtrunA17_Chr4g0058991 58.621 87 36 0 94 180 207 293 9.13e-29 110
Msa1306290 MtrunA17_Chr4g0058991 38.542 96 58 1 43 138 208 302 1.21e-14 70.9
Msa1306290 MtrunA17_Chr5g0401731 51.136 88 43 0 93 180 12 99 3.11e-27 104
Msa1306290 MtrunA17_Chr7g0228531 57.955 88 36 1 93 180 217 303 1.71e-26 104
Msa1306290 MtrunA17_Chr7g0228531 43.158 95 52 2 44 138 220 312 6.26e-17 77.4
Msa1306290 MtrunA17_Chr4g0008551 50.000 86 43 0 95 180 37 122 6.20e-26 101
Msa1306290 MtrunA17_Chr4g0008551 28.571 133 91 2 43 175 37 165 4.84e-13 66.2
Msa1306290 MtrunA17_Chr5g0437321 47.778 90 47 0 91 180 14 103 9.17e-26 100
Msa1306290 MtrunA17_Chr5g0437321 30.000 100 69 1 43 142 18 116 6.16e-11 59.7
Msa1306290 MtrunA17_Chr4g0053431 46.591 88 47 0 93 180 2 89 1.32e-25 99.4
Msa1306290 MtrunA17_Chr7g0228481 55.682 88 38 1 93 180 217 303 3.89e-25 100
Msa1306290 MtrunA17_Chr7g0228481 40.000 95 55 2 44 138 220 312 6.25e-14 68.9
Msa1306290 MtrunA17_Chr3g0133601 47.727 88 46 0 93 180 34 121 7.43e-25 96.3
Msa1306290 MtrunA17_Chr3g0133601 30.303 99 68 1 44 142 37 134 7.17e-11 58.9
Msa1306290 MtrunA17_Chr6g0454921 47.727 88 46 0 93 180 12 99 8.45e-25 95.9
Msa1306290 MtrunA17_Chr7g0228401 62.162 74 28 0 107 180 290 363 1.01e-24 99.8
Msa1306290 MtrunA17_Chr7g0228401 40.476 84 49 1 55 138 290 372 7.22e-13 65.9
Msa1306290 MtrunA17_Chr1g0177901 60.811 74 29 0 107 180 5 78 2.32e-24 94.7
Msa1306290 MtrunA17_Chr1g0177901 39.535 86 50 2 54 138 3 87 2.32e-13 65.5
Msa1306290 MtrunA17_Chr6g0483051 37.681 138 84 2 45 181 17 153 3.63e-24 98.6
Msa1306290 MtrunA17_Chr6g0483051 38.060 134 81 2 47 180 72 203 7.09e-23 94.7
Msa1306290 MtrunA17_Chr6g0483051 38.542 96 57 2 44 139 120 213 1.07e-12 65.5
Msa1306290 MtrunA17_Chr6g0480581 49.412 85 43 0 96 180 4 88 6.31e-24 94.4
Msa1306290 MtrunA17_Chr6g0480581 29.897 97 67 1 43 139 3 98 5.25e-12 62.4
Msa1306290 MtrunA17_Chr6g0460661 47.059 85 45 0 96 180 16 100 1.19e-23 91.7
Msa1306290 MtrunA17_Chr6g0460661 29.293 99 69 1 41 139 13 110 7.62e-11 57.8
Msa1306290 MtrunA17_Chr5g0417621 48.235 85 44 0 96 180 134 218 4.77e-23 94.7
Msa1306290 MtrunA17_Chr4g0042501 47.059 85 45 0 96 180 105 189 1.31e-22 93.6
Msa1306290 MtrunA17_Chr4g0042501 29.808 104 72 1 36 139 97 199 8.67e-11 59.7
Msa1306290 MtrunA17_Chr3g0125801 47.059 85 45 0 96 180 16 100 2.08e-20 85.9
Msa1306290 MtrunA17_Chr6g0460671 43.023 86 49 0 95 180 98 183 1.71e-19 84.3
Msa1306290 MtrunA17_Chr2g0309911 48.276 87 42 2 96 180 13 98 2.13e-19 83.6
Msa1306290 MtrunA17_Chr8g0349261 50.000 90 41 3 94 180 13 101 3.34e-19 82.8
Msa1306290 MtrunA17_Chr8g0349261 33.981 103 61 3 44 142 15 114 2.01e-12 63.9
Msa1306290 MtrunA17_Chr7g0254261 48.235 85 44 0 96 180 89 173 3.91e-19 83.2
Msa1306290 MtrunA17_Chr5g0416341 42.683 82 47 0 99 180 29 110 4.96e-19 83.6
Msa1306290 MtrunA17_Chr5g0416341 35.870 92 58 1 47 138 29 119 1.37e-11 62.0
Msa1306290 MtrunA17_Chr1g0187761 47.191 89 44 2 94 180 12 99 1.26e-18 80.5
Msa1306290 MtrunA17_Chr5g0435101 44.186 86 47 1 96 180 13 98 1.45e-18 79.3
Msa1306290 MtrunA17_Chr5g0425591 44.706 85 45 2 93 175 8 92 1.52e-18 76.3
Msa1306290 MtrunA17_Chr1g0186061 47.126 87 43 2 96 180 22 107 1.71e-18 80.1
Msa1306290 MtrunA17_Chr1g0186061 38.000 100 60 2 44 142 22 120 2.51e-12 63.5
Msa1306290 MtrunA17_Chr7g0274581 45.349 86 46 1 96 180 14 99 1.78e-18 79.3
Msa1306290 MtrunA17_Chr7g0274581 31.193 109 69 3 44 149 14 119 2.07e-13 65.5
Msa1306290 MtrunA17_Chr5g0410961 44.186 86 47 1 96 180 14 99 1.80e-18 81.3
Msa1306290 MtrunA17_Chr7g0233061 50.562 89 36 2 95 180 179 262 2.57e-18 80.9
Msa1306290 MtrunA17_Chr7g0233061 36.441 118 64 3 25 138 161 271 2.77e-14 69.7
Msa1306290 MtrunA17_Chr3g0099141 41.860 86 49 1 93 177 39 124 2.72e-18 77.0
Msa1306290 MtrunA17_Chr3g0115821 46.067 89 45 2 94 180 12 99 3.06e-18 80.5
Msa1306290 MtrunA17_Chr3g0115821 30.081 123 81 3 44 162 14 135 2.13e-12 64.3
Msa1306290 MtrunA17_Chr4g0055981 44.186 86 47 1 96 180 57 142 4.35e-18 78.6
Msa1306290 MtrunA17_Chr4g0055981 28.659 164 109 5 16 172 26 188 1.33e-13 66.6
Msa1306290 MtrunA17_Chr1g0167691 46.591 88 46 1 94 180 12 99 4.86e-18 79.0
Msa1306290 MtrunA17_Chr2g0311221 46.512 86 45 1 96 180 16 101 5.76e-18 79.7
Msa1306290 MtrunA17_Chr2g0281071 45.055 91 49 1 91 180 10 100 5.93e-18 79.7
Msa1306290 MtrunA17_Chr4g0048511 43.956 91 50 1 91 180 10 100 7.71e-18 79.7
Msa1306290 MtrunA17_Chr8g0343831 45.349 86 46 1 96 180 10 95 8.19e-18 78.2
Msa1306290 MtrunA17_Chr3g0104501 58.730 63 26 0 85 147 122 184 1.08e-17 77.0
Msa1306290 MtrunA17_Chr3g0099131 43.820 89 49 1 93 180 40 128 1.11e-17 79.7
Msa1306290 MtrunA17_Chr8g0362231 41.463 82 48 0 99 180 25 106 1.14e-17 79.7
Msa1306290 MtrunA17_Chr8g0354661 47.727 88 45 1 94 180 37 124 1.18e-17 79.7
Msa1306290 MtrunA17_Chr4g0039971 47.191 89 44 2 94 180 13 100 1.29e-17 79.0
Msa1306290 MtrunA17_Chr4g0039971 33.000 100 65 2 44 142 15 113 1.96e-12 64.3
Msa1306290 MtrunA17_Chr5g0440781 44.444 90 48 2 93 180 11 100 1.56e-17 76.3
Msa1306290 MtrunA17_Chr5g0440781 33.673 98 64 1 42 138 12 109 5.61e-13 64.3
Msa1306290 MtrunA17_Chr1g0168661 44.828 87 45 2 96 180 23 108 1.64e-17 77.4
Msa1306290 MtrunA17_Chr1g0168661 37.624 101 59 3 44 142 23 121 6.55e-12 62.4
Msa1306290 MtrunA17_Chr7g0228231 42.857 91 51 1 91 180 11 101 1.76e-17 76.6
Msa1306290 MtrunA17_Chr4g0046181 53.846 65 30 0 88 152 213 277 1.77e-17 77.8
Msa1306290 MtrunA17_Chr2g0323411 43.182 88 49 1 94 180 12 99 2.27e-17 78.2
Msa1306290 MtrunA17_Chr1g0211161 46.067 89 45 2 94 180 13 100 2.41e-17 76.6
Msa1306290 MtrunA17_Chr4g0022891 47.126 87 43 2 96 180 14 99 3.69e-17 76.3
Msa1306290 MtrunA17_Chr5g0441131 42.222 90 50 2 93 180 8 97 4.20e-17 75.1
Msa1306290 MtrunA17_Chr5g0441131 33.663 101 60 2 42 138 9 106 1.97e-13 65.5
Msa1306290 MtrunA17_Chr5g0395281 44.944 89 46 2 94 180 12 99 4.33e-17 77.0
Msa1306290 MtrunA17_Chr5g0395281 33.000 100 65 2 44 142 14 112 4.39e-13 65.9
Msa1306290 MtrunA17_Chr7g0261281 45.455 88 47 1 94 180 12 99 4.92e-17 76.6
Msa1306290 MtrunA17_Chr7g0261281 29.508 122 81 3 44 164 14 131 8.12e-12 62.0
Msa1306290 MtrunA17_Chr3g0103281 41.860 86 49 1 96 180 14 99 5.61e-17 77.0
Msa1306290 MtrunA17_Chr1g0154031 46.591 88 46 1 94 180 76 163 5.77e-17 77.4
Msa1306290 MtrunA17_Chr1g0154031 37.500 96 58 2 44 138 78 172 3.79e-13 66.6
Msa1306290 MtrunA17_Chr4g0030881 42.553 94 44 2 96 180 9 101 7.10e-17 75.9
Msa1306290 MtrunA17_Chr4g0030881 34.862 109 62 3 42 142 7 114 6.40e-11 59.3
Msa1306290 MtrunA17_Chr5g0440761 44.444 90 48 2 93 180 11 100 7.37e-17 75.9
Msa1306290 MtrunA17_Chr5g0440761 34.375 96 62 1 44 138 14 109 2.30e-12 63.5
Msa1306290 MtrunA17_Chr4g0070641 42.045 88 50 1 94 180 12 99 8.22e-17 73.9
Msa1306290 MtrunA17_Chr8g0346561 44.565 92 42 2 94 180 12 99 9.08e-17 76.3
Msa1306290 MtrunA17_Chr5g0441141 44.444 90 48 2 93 180 11 100 9.78e-17 75.9
Msa1306290 MtrunA17_Chr5g0441141 34.375 96 62 1 44 138 14 109 1.91e-12 63.9
Msa1306290 MtrunA17_Chr3g0080861 45.455 88 47 1 94 180 37 124 1.01e-16 77.0
Msa1306290 MtrunA17_Chr7g0233161 61.404 57 22 0 91 147 294 350 1.70e-16 75.9
Msa1306290 MtrunA17_Chr5g0417821 40.000 85 50 1 94 177 7 91 1.92e-16 75.1
Msa1306290 MtrunA17_Chr5g0417821 35.849 106 62 3 44 148 9 109 8.63e-12 62.0
Msa1306290 MtrunA17_Chr3g0117091 46.067 89 45 2 94 180 12 99 2.13e-16 75.5
Msa1306290 MtrunA17_Chr1g0193371 43.820 89 47 2 94 180 12 99 3.35e-16 75.1
Msa1306290 MtrunA17_Chr1g0193371 34.375 96 61 2 44 138 14 108 1.83e-11 61.6
Msa1306290 MtrunA17_Chr1g0167661 43.182 88 49 1 94 180 12 99 3.60e-16 73.9
Msa1306290 MtrunA17_Chr2g0327821 39.785 93 55 1 89 180 1 93 3.62e-16 73.6
Msa1306290 MtrunA17_Chr2g0327821 35.644 101 61 3 44 142 8 106 5.21e-11 59.3
Msa1306290 MtrunA17_Chr8g0385321 41.860 86 49 1 96 180 14 99 3.76e-16 74.7
Msa1306290 MtrunA17_Chr8g0385321 32.692 104 68 2 40 142 10 112 7.03e-12 62.8
Msa1306290 MtrunA17_Chr4g0037141 40.698 86 50 1 96 180 14 99 4.14e-16 73.9
Msa1306290 MtrunA17_Chr4g0037141 33.333 102 66 2 42 142 12 112 7.26e-12 62.4
Msa1306290 MtrunA17_Chr2g0328771 43.182 88 49 1 94 180 20 107 4.25e-16 74.3
Msa1306290 MtrunA17_Chr5g0397231 44.186 86 47 1 96 180 14 99 5.46e-16 74.3
Msa1306290 MtrunA17_Chr4g0070611 42.045 88 50 1 94 180 12 99 5.99e-16 73.9
Msa1306290 MtrunA17_Chr7g0271241 43.820 89 47 2 94 180 12 99 6.00e-16 74.3
Msa1306290 MtrunA17_Chr7g0271241 35.417 96 60 2 44 138 14 108 5.12e-12 63.2
Msa1306290 MtrunA17_Chr7g0275911 41.304 92 45 2 94 180 12 99 6.35e-16 73.2
Msa1306290 MtrunA17_Chr8g0342541 43.678 87 46 2 96 180 14 99 7.60e-16 73.9
Msa1306290 MtrunA17_Chr1g0194301 40.698 86 50 1 96 180 35 120 7.65e-16 73.2
Msa1306290 MtrunA17_Chr6g0453751 41.489 94 45 3 91 174 17 110 7.87e-16 70.5
Msa1306290 MtrunA17_Chr6g0450101 39.560 91 54 1 91 180 11 101 1.11e-15 71.6
Msa1306290 MtrunA17_Chr6g0453471 42.045 88 50 1 94 180 12 99 1.19e-15 73.6
Msa1306290 MtrunA17_Chr1g0203411 41.860 86 49 1 96 180 14 99 1.29e-15 72.8
Msa1306290 MtrunA17_Chr8g0387421 43.023 86 48 1 96 180 14 99 1.30e-15 73.2
Msa1306290 MtrunA17_Chr3g0131121 39.535 86 51 1 96 180 14 99 1.35e-15 72.8
Msa1306290 MtrunA17_Chr3g0131121 35.294 102 64 2 42 142 12 112 1.59e-12 64.3
Msa1306290 MtrunA17_Chr4g0057031 44.828 87 45 2 96 180 14 99 1.50e-15 72.4
Msa1306290 MtrunA17_Chr2g0330041 44.828 87 45 2 96 180 14 99 1.53e-15 73.6
Msa1306290 MtrunA17_Chr4g0042611 44.737 76 41 1 94 168 12 87 1.75e-15 68.2
Msa1306290 MtrunA17_Chr1g0209661 40.449 89 52 1 93 180 26 114 1.86e-15 72.8
Msa1306290 MtrunA17_Chr4g0022901 45.349 86 46 1 96 180 15 100 1.88e-15 72.0
Msa1306290 MtrunA17_Chr2g0323351 46.067 89 45 2 94 180 12 99 1.88e-15 72.0
Msa1306290 MtrunA17_Chr3g0088461 42.045 88 50 1 94 180 22 109 2.00e-15 72.8
Msa1306290 MtrunA17_Chr4g0022931 45.349 86 46 1 96 180 15 100 2.12e-15 72.0
Msa1306290 MtrunA17_Chr4g0022931 29.565 115 79 2 44 157 15 128 7.75e-11 59.3
Msa1306290 MtrunA17_Chr7g0228891 42.697 89 48 2 94 180 12 99 2.37e-15 72.0
Msa1306290 MtrunA17_Chr8g0334881 44.828 87 46 2 96 180 12 98 2.48e-15 72.4
Msa1306290 MtrunA17_Chr4g0044421 43.182 88 45 2 96 180 14 99 2.80e-15 70.5
Msa1306290 MtrunA17_Chr4g0044421 33.663 101 65 2 43 142 13 112 2.30e-11 59.7
Msa1306290 MtrunA17_Chr1g0194951 40.909 88 51 1 94 180 12 99 2.93e-15 72.4
Msa1306290 MtrunA17_Chr4g0032401 41.758 91 52 1 91 180 14 104 3.08e-15 72.0
Msa1306290 MtrunA17_Chr4g0022881 40.698 86 50 1 96 180 14 99 3.11e-15 70.9
Msa1306290 MtrunA17_Chr4g0022881 33.000 100 65 2 44 142 14 112 3.83e-14 68.2
Msa1306290 MtrunA17_Chr7g0270891 43.182 88 49 1 94 180 12 99 3.17e-15 72.4
Msa1306290 MtrunA17_Chr7g0270891 34.000 100 64 2 44 142 14 112 4.58e-11 60.5
Msa1306290 MtrunA17_Chr3g0110351 43.820 89 47 2 94 180 12 99 3.25e-15 72.0
Msa1306290 MtrunA17_Chr4g0013361 43.678 87 47 2 96 180 12 98 3.31e-15 71.6
Msa1306290 MtrunA17_Chr4g0022911 44.186 86 47 1 96 180 15 100 3.33e-15 71.6
Msa1306290 MtrunA17_Chr5g0434571 43.820 89 47 2 94 180 48 135 3.72e-15 72.0
Msa1306290 MtrunA17_Chr4g0058631 40.404 99 58 1 83 180 1 99 3.80e-15 72.0
Msa1306290 MtrunA17_Chr8g0342521 43.678 87 46 2 96 180 14 99 4.18e-15 72.0
Msa1306290 MtrunA17_Chr1g0180391 41.111 90 50 2 93 180 18 106 4.50e-15 70.5
Msa1306290 MtrunA17_Chr1g0180391 33.019 106 67 3 44 147 21 124 3.52e-11 60.1
Msa1306290 MtrunA17_Chr1g0194291 39.535 86 51 1 96 180 23 108 4.51e-15 70.9
Msa1306290 MtrunA17_Chr1g0203441 41.111 90 52 1 92 180 11 100 5.27e-15 70.9
Msa1306290 MtrunA17_Chr7g0217741 41.304 92 45 2 94 180 12 99 5.43e-15 71.2
Msa1306290 MtrunA17_Chr6g0470971 43.023 86 48 1 96 180 16 101 5.65e-15 70.9
Msa1306290 MtrunA17_Chr1g0193801 42.045 88 50 1 94 180 12 99 5.85e-15 71.6
Msa1306290 MtrunA17_Chr1g0193801 34.375 96 61 2 44 138 14 108 2.65e-11 61.2
Msa1306290 MtrunA17_Chr4g0042671 42.045 88 50 1 94 180 12 99 1.04e-14 70.9
Msa1306290 MtrunA17_Chr4g0042671 34.000 100 64 2 44 142 14 112 1.34e-11 62.0
Msa1306290 MtrunA17_Chr1g0192411 44.318 88 48 1 94 180 12 99 1.21e-14 70.9
Msa1306290 MtrunA17_Chr8g0342481 43.182 88 46 3 96 180 14 100 1.81e-14 70.5
Msa1306290 MtrunA17_Chr5g0395221 40.789 76 44 1 94 168 12 87 3.68e-14 64.7
Msa1306290 MtrunA17_Chr4g0068921 39.326 89 53 1 93 180 23 111 4.02e-14 67.4
Msa1306290 MtrunA17_Chr7g0247131 53.226 62 27 1 121 180 4 65 4.61e-14 68.2
Msa1306290 MtrunA17_Chr3g0121241 38.636 88 53 1 94 180 42 129 5.01e-14 68.6
Msa1306290 MtrunA17_Chr7g0217221 40.698 86 50 1 96 180 14 99 7.84e-14 67.8
Msa1306290 MtrunA17_Chr5g0434831 38.636 88 53 1 94 180 7 94 8.23e-14 66.2
Msa1306290 MtrunA17_Chr4g0068061 38.636 88 53 1 94 180 12 99 1.93e-13 67.0
Msa1306290 MtrunA17_Chr2g0322521 47.674 86 44 1 96 180 31 116 3.19e-13 66.6
Msa1306290 MtrunA17_Chr2g0323321 37.634 93 55 2 91 181 8 99 3.46e-13 62.8
Msa1306290 MtrunA17_Chr8g0342511 40.789 76 42 2 96 169 14 88 3.84e-13 62.4
Msa1306290 MtrunA17_Chr2g0293911 39.326 89 53 1 93 180 23 111 4.20e-13 66.2
Msa1306290 MtrunA17_Chr6g0452271 40.698 86 50 1 96 180 14 99 6.33e-13 65.9
Msa1306290 MtrunA17_Chr7g0254411 39.535 86 51 1 96 180 14 99 6.57e-13 65.5
Msa1306290 MtrunA17_Chr8g0342531 37.647 85 49 3 96 177 14 97 7.21e-13 63.5
Msa1306290 MtrunA17_Chr6g0453211 39.535 86 51 1 96 180 14 99 7.30e-13 65.5
Msa1306290 MtrunA17_Chr7g0240821 40.476 84 47 2 99 180 6 88 1.06e-12 63.9
Msa1306290 MtrunA17_Chr5g0434911 36.190 105 65 2 39 142 18 121 1.09e-12 64.7
Msa1306290 MtrunA17_Chr5g0434911 36.047 86 54 1 96 180 23 108 9.38e-12 62.0
Msa1306290 MtrunA17_Chr8g0360111 37.209 86 53 1 96 180 27 112 1.17e-12 64.3
Msa1306290 MtrunA17_Chr8g0360111 34.259 108 66 3 36 142 22 125 4.20e-11 60.1
Msa1306290 MtrunA17_Chr5g0434841 38.636 88 53 1 94 180 20 107 1.51e-12 64.7
Msa1306290 MtrunA17_Chr4g0060721 38.372 86 52 1 96 180 15 100 1.89e-12 64.3
Msa1306290 MtrunA17_Chr5g0434931 34.286 105 67 2 39 142 32 135 2.22e-12 63.9
Msa1306290 MtrunA17_Chr5g0434931 36.047 86 54 1 96 180 37 122 4.85e-12 62.8
Msa1306290 MtrunA17_Chr3g0092401 38.372 86 52 1 96 180 15 100 3.87e-12 63.2
Msa1306290 MtrunA17_Chr8g0342471 41.026 78 42 3 96 170 14 90 4.33e-12 60.8
Msa1306290 MtrunA17_Chr8g0342461 41.026 78 42 3 96 170 14 90 4.75e-12 60.5
Msa1306290 MtrunA17_Chr7g0220341 37.500 88 52 1 96 180 27 114 5.57e-12 62.8
Msa1306290 MtrunA17_Chr7g0220341 35.345 116 68 3 44 156 27 138 4.13e-11 60.1
Msa1306290 MtrunA17_Chr1g0151941 39.080 87 51 2 96 180 14 100 6.86e-12 62.0
Msa1306290 MtrunA17_Chr4g0072751 39.080 87 51 2 96 180 14 100 9.20e-12 62.4
Msa1306290 MtrunA17_Chr7g0228991 36.047 86 54 1 96 180 31 116 1.25e-11 61.6
Msa1306290 MtrunA17_Chr7g0228991 33.663 101 65 2 44 143 31 130 2.20e-11 60.8
Msa1306290 MtrunA17_Chr3g0135311 37.931 87 52 2 96 180 14 100 1.33e-11 62.0
Msa1306290 MtrunA17_Chr5g0400821 37.931 87 52 2 96 180 14 100 1.63e-11 61.6
Msa1306290 MtrunA17_Chr7g0269831 44.318 88 48 1 94 180 12 99 1.78e-11 61.6
Msa1306290 MtrunA17_Chr2g0294811 33.735 83 54 1 96 177 14 96 2.19e-11 58.5
Msa1306290 MtrunA17_Chr7g0274481 39.773 88 51 2 94 180 4 90 4.17e-11 60.8
Msa1306290 MtrunA17_Chr7g0274481 35.238 105 65 3 40 143 2 104 4.21e-11 60.8
Msa1306290 MtrunA17_Chr7g0264641 37.931 87 52 2 96 180 14 100 6.06e-11 59.7
Msa1306290 MtrunA17_Chr2g0327351 40.230 87 50 2 96 180 14 100 7.51e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1306290 AT4G32730.1 64.667 150 53 0 31 180 22 171 9.91e-68 220
Msa1306290 AT4G32730.5 64.667 150 53 0 31 180 22 171 4.96e-67 221
Msa1306290 AT4G32730.4 64.667 150 53 0 31 180 22 171 4.96e-67 221
Msa1306290 AT4G32730.3 64.667 150 53 0 31 180 22 171 4.96e-67 221
Msa1306290 AT4G32730.2 64.667 150 53 0 31 180 22 171 4.96e-67 221
Msa1306290 AT5G02320.1 56.452 186 74 3 1 180 27 211 1.19e-66 213
Msa1306290 AT5G02320.2 56.452 186 74 3 1 180 27 211 1.19e-66 213
Msa1306290 AT5G02320.3 65.541 148 50 1 33 180 5 151 3.26e-66 210
Msa1306290 AT4G00540.2 54.737 190 76 3 1 180 1 190 2.96e-64 203
Msa1306290 AT4G00540.1 54.255 188 78 2 1 180 1 188 1.42e-63 202
Msa1306290 AT5G11510.5 57.317 164 70 0 17 180 2 165 1.45e-63 209
Msa1306290 AT5G11510.2 57.317 164 70 0 17 180 2 165 1.75e-63 209
Msa1306290 AT5G11510.3 57.317 164 70 0 17 180 2 165 4.23e-63 209
Msa1306290 AT5G11510.1 57.317 164 70 0 17 180 2 165 4.23e-63 209
Msa1306290 AT5G11510.4 57.317 164 70 0 17 180 2 165 4.23e-63 209
Msa1306290 AT3G09370.1 63.265 147 53 1 34 180 69 214 1.98e-62 201
Msa1306290 AT3G09370.2 63.265 147 53 1 34 180 74 219 2.00e-62 201
Msa1306290 AT3G09370.3 57.310 171 72 1 10 180 58 227 3.28e-62 201
Msa1306290 AT3G27785.1 62.069 87 33 0 94 180 187 273 1.00e-30 116
Msa1306290 AT3G27785.1 38.739 111 65 2 30 138 173 282 2.19e-18 82.0
Msa1306290 AT4G18770.1 55.789 95 42 0 86 180 207 301 1.15e-29 113
Msa1306290 AT4G18770.1 44.118 102 54 2 39 138 210 310 6.28e-19 83.6
Msa1306290 AT3G09230.1 54.545 88 40 0 93 180 52 139 3.28e-28 108
Msa1306290 AT3G09230.1 35.922 103 65 1 40 142 51 152 1.42e-14 70.9
Msa1306290 AT5G40360.1 57.303 89 37 1 93 180 154 242 4.28e-28 107
Msa1306290 AT5G40360.1 44.211 95 52 1 44 138 158 251 1.26e-17 79.3
Msa1306290 AT5G11050.1 38.158 152 91 2 31 180 39 189 7.77e-28 108
Msa1306290 AT5G11050.1 35.644 101 64 1 38 138 99 198 1.37e-12 65.5
Msa1306290 AT5G58850.1 53.409 88 41 0 93 180 102 189 1.02e-27 107
Msa1306290 AT5G58850.1 37.895 95 58 1 44 138 105 198 1.25e-13 68.6
Msa1306290 AT2G13960.1 49.074 108 48 3 1 102 27 133 1.20e-27 101
Msa1306290 AT3G18100.1 39.416 137 82 1 44 180 495 630 3.72e-27 107
Msa1306290 AT3G18100.1 39.130 138 81 3 45 180 443 579 3.21e-25 102
Msa1306290 AT3G18100.1 41.121 107 56 3 38 141 543 645 1.80e-17 79.7
Msa1306290 AT3G18100.1 32.110 109 72 2 74 180 420 528 9.10e-12 63.2
Msa1306290 AT3G18100.3 39.416 137 82 1 44 180 447 582 4.02e-27 107
Msa1306290 AT3G18100.3 39.130 138 81 3 45 180 395 531 3.92e-25 101
Msa1306290 AT3G18100.3 41.121 107 56 3 38 141 495 597 2.14e-17 79.3
Msa1306290 AT3G18100.3 32.110 109 72 2 74 180 372 480 1.01e-11 63.2
Msa1306290 AT3G18100.2 39.416 137 82 1 44 180 282 417 4.30e-27 107
Msa1306290 AT3G18100.2 39.130 138 81 3 45 180 230 366 4.68e-25 101
Msa1306290 AT3G18100.2 41.121 107 56 3 38 141 330 432 2.29e-17 79.3
Msa1306290 AT3G18100.2 32.110 109 72 2 74 180 207 315 9.96e-12 63.2
Msa1306290 AT3G18100.4 39.416 137 82 1 44 180 334 469 4.73e-27 107
Msa1306290 AT3G18100.4 39.130 138 81 3 45 180 282 418 5.02e-25 101
Msa1306290 AT3G18100.4 41.121 107 56 3 38 141 382 484 2.18e-17 79.3
Msa1306290 AT3G18100.4 32.110 109 72 2 74 180 259 367 1.13e-11 62.8
Msa1306290 AT3G50060.1 47.727 88 46 0 93 180 3 90 5.54e-27 103
Msa1306290 AT2G23290.1 51.136 88 43 0 93 180 10 97 7.58e-27 103
Msa1306290 AT2G25230.1 52.273 88 42 0 93 180 23 110 1.32e-26 101
Msa1306290 AT2G25230.1 37.895 95 58 1 44 138 26 119 3.83e-11 60.1
Msa1306290 AT5G67300.1 50.000 88 44 0 93 180 3 90 1.54e-26 102
Msa1306290 AT2G13960.2 55.294 85 37 1 18 102 15 98 1.58e-26 97.8
Msa1306290 AT4G37260.1 47.778 90 47 0 91 180 8 97 3.48e-26 102
Msa1306290 AT3G55730.1 50.000 86 43 0 95 180 55 140 1.17e-25 102
Msa1306290 AT3G55730.1 33.010 103 68 1 40 142 52 153 5.41e-12 63.5
Msa1306290 AT4G33450.1 50.562 89 44 0 92 180 15 103 4.61e-25 97.8
Msa1306290 AT4G33450.1 31.250 96 65 1 44 139 19 113 5.25e-12 62.8
Msa1306290 AT3G29020.1 48.235 85 44 0 96 180 65 149 6.29e-25 97.1
Msa1306290 AT3G29020.2 48.235 85 44 0 96 180 67 151 3.39e-24 96.7
Msa1306290 AT1G17950.1 48.235 85 44 0 96 180 5 89 3.86e-24 95.5
Msa1306290 AT1G17950.1 29.897 97 67 1 43 139 4 99 1.24e-11 61.6
Msa1306290 AT1G69560.1 47.059 85 45 0 96 180 107 191 4.01e-23 94.0
Msa1306290 AT1G26780.1 48.276 87 45 0 94 180 96 182 4.44e-23 93.2
Msa1306290 AT1G69560.2 47.059 85 45 0 96 180 123 207 4.49e-23 94.4
Msa1306290 AT2G39880.1 44.186 86 48 0 95 180 49 134 5.48e-23 94.4
Msa1306290 AT2G39880.1 29.565 115 80 1 28 142 34 147 3.17e-11 61.2
Msa1306290 AT5G40430.1 48.864 88 44 1 93 180 51 137 1.04e-22 91.7
Msa1306290 AT5G40430.1 40.625 96 55 2 43 138 53 146 1.74e-12 64.3
Msa1306290 AT1G26780.2 48.276 87 45 0 94 180 96 182 1.24e-22 93.2
Msa1306290 AT1G73410.2 47.059 85 45 0 96 180 6 90 4.20e-21 86.3
Msa1306290 AT1G73410.1 47.059 85 45 0 96 180 6 90 7.02e-21 86.7
Msa1306290 AT5G17800.1 45.882 85 46 0 96 180 93 177 3.09e-20 86.3
Msa1306290 AT2G47190.1 43.820 89 49 1 93 180 19 107 4.39e-20 85.1
Msa1306290 AT3G61250.1 49.438 89 42 2 94 180 12 99 1.50e-19 84.0
Msa1306290 AT3G61250.1 35.294 102 60 3 44 142 14 112 4.27e-13 66.2
Msa1306290 AT5G39700.1 41.667 84 49 0 97 180 57 140 4.46e-19 80.9
Msa1306290 AT4G05100.1 46.591 88 46 1 94 180 13 100 7.91e-19 82.4
Msa1306290 AT3G12820.1 45.977 87 44 2 96 180 16 101 9.15e-19 80.9
Msa1306290 AT1G16490.1 45.556 90 40 2 96 180 16 101 9.56e-19 81.6
Msa1306290 AT1G56160.1 45.977 87 44 2 96 180 16 101 9.80e-19 81.6
Msa1306290 AT4G28110.1 44.186 86 47 1 96 180 14 99 1.02e-18 81.6
Msa1306290 AT1G06180.1 47.191 89 44 2 94 180 12 99 1.36e-18 80.5
Msa1306290 AT3G11440.2 47.191 89 44 2 94 180 41 128 2.00e-18 82.4
Msa1306290 AT3G11440.2 35.417 96 60 2 44 138 43 137 6.62e-11 60.5
Msa1306290 AT1G79180.1 47.674 86 44 1 96 180 16 101 2.02e-18 80.9
Msa1306290 AT1G79180.1 28.448 116 81 2 44 158 16 130 9.67e-11 59.7
Msa1306290 AT3G11440.3 47.191 89 44 2 94 180 41 128 2.22e-18 82.4
Msa1306290 AT3G11440.3 35.417 96 60 2 44 138 43 137 8.23e-11 60.5
Msa1306290 AT3G11440.4 47.191 89 44 2 94 180 41 128 2.22e-18 82.4
Msa1306290 AT3G11440.4 35.417 96 60 2 44 138 43 137 8.23e-11 60.5
Msa1306290 AT3G11440.1 47.191 89 44 2 94 180 41 128 2.22e-18 82.4
Msa1306290 AT3G11440.1 35.417 96 60 2 44 138 43 137 8.23e-11 60.5
Msa1306290 AT3G12720.1 45.977 87 44 2 96 180 24 109 2.41e-18 80.9
Msa1306290 AT3G53200.1 42.045 88 50 1 94 180 9 96 2.63e-18 79.7
Msa1306290 AT3G53200.1 34.000 100 62 3 44 141 11 108 6.29e-12 62.4
Msa1306290 AT5G14750.1 42.857 91 51 1 91 180 13 103 3.15e-18 79.0
Msa1306290 AT5G14750.1 38.614 101 58 3 44 142 18 116 1.37e-13 66.2
Msa1306290 AT4G17785.2 44.828 87 45 2 96 180 15 100 3.54e-18 80.9
Msa1306290 AT4G17785.1 44.828 87 45 2 96 180 15 100 3.83e-18 80.9
Msa1306290 AT2G26960.1 46.591 88 46 1 94 180 20 107 4.00e-18 81.3
Msa1306290 AT2G26960.1 38.144 97 58 2 43 138 21 116 6.88e-13 66.2
Msa1306290 AT3G23250.1 45.455 88 47 1 94 180 12 99 5.63e-18 79.7
Msa1306290 AT3G23250.1 29.000 100 69 2 44 142 14 112 3.82e-11 60.8
Msa1306290 AT1G14350.2 40.244 82 49 0 99 180 28 109 7.03e-18 80.5
Msa1306290 AT1G14350.1 40.244 82 49 0 99 180 28 109 7.03e-18 80.5
Msa1306290 AT5G16770.4 44.318 88 48 1 94 180 12 99 7.30e-18 79.7
Msa1306290 AT5G16770.4 34.000 100 64 2 44 142 14 112 4.05e-12 63.5
Msa1306290 AT5G16770.3 44.318 88 48 1 94 180 12 99 7.30e-18 79.7
Msa1306290 AT5G16770.3 34.000 100 64 2 44 142 14 112 4.05e-12 63.5
Msa1306290 AT2G02820.3 39.024 82 50 0 99 180 33 114 8.40e-18 79.7
Msa1306290 AT5G16770.1 44.318 88 48 1 94 180 12 99 8.70e-18 79.7
Msa1306290 AT5G16770.1 34.000 100 64 2 44 142 14 112 3.99e-12 63.9
Msa1306290 AT5G16770.2 44.318 88 48 1 94 180 12 99 8.70e-18 79.7
Msa1306290 AT5G16770.2 34.000 100 64 2 44 142 14 112 3.99e-12 63.9
Msa1306290 AT5G55020.1 46.591 88 46 1 94 180 26 113 1.10e-17 80.1
Msa1306290 AT5G12870.1 45.349 86 46 1 96 180 20 105 1.11e-17 78.6
Msa1306290 AT3G30210.1 44.186 86 47 1 96 180 29 114 1.18e-17 78.6
Msa1306290 AT3G30210.1 36.364 99 61 2 44 141 29 126 3.08e-11 60.8
Msa1306290 AT5G06100.5 44.554 101 50 3 82 180 23 119 1.39e-17 79.7
Msa1306290 AT5G06100.2 44.554 101 50 3 82 180 23 119 1.39e-17 79.7
Msa1306290 AT5G06100.3 44.554 101 50 3 82 180 23 119 1.39e-17 79.7
Msa1306290 AT5G06100.4 44.554 101 50 3 82 180 23 119 1.39e-17 79.7
Msa1306290 AT5G65230.1 44.944 89 46 2 94 180 12 99 1.47e-17 79.0
Msa1306290 AT5G65230.1 33.000 100 65 2 44 142 14 112 7.99e-11 60.1
Msa1306290 AT5G06100.1 44.554 101 50 3 82 180 23 119 1.67e-17 79.7
Msa1306290 AT4G21440.1 44.318 88 48 1 94 180 12 99 1.74e-17 79.0
Msa1306290 AT2G02820.1 39.024 82 50 0 99 180 33 114 1.89e-17 79.3
Msa1306290 AT2G02820.2 39.024 82 50 0 99 180 33 114 1.96e-17 79.3
Msa1306290 AT5G59780.3 42.553 94 53 1 88 180 2 95 2.33e-17 77.0
Msa1306290 AT5G59780.3 36.634 101 60 3 44 142 10 108 8.93e-12 62.0
Msa1306290 AT4G13480.1 45.977 87 44 2 96 180 8 93 2.39e-17 77.4
Msa1306290 AT3G02940.2 44.318 88 48 1 94 180 12 99 3.53e-17 77.8
Msa1306290 AT3G02940.2 32.000 100 66 2 44 142 14 112 7.05e-11 60.1
Msa1306290 AT2G32460.1 47.727 88 45 1 94 180 18 105 4.08e-17 78.6
Msa1306290 AT3G02940.1 44.318 88 48 1 94 180 12 99 4.58e-17 77.4
Msa1306290 AT3G02940.1 32.000 100 66 2 44 142 14 112 8.17e-11 60.1
Msa1306290 AT3G02940.3 44.318 88 48 1 94 180 12 99 4.58e-17 77.4
Msa1306290 AT3G02940.3 32.000 100 66 2 44 142 14 112 8.17e-11 60.1
Msa1306290 AT2G32460.2 47.727 88 45 1 94 180 6 93 4.82e-17 78.2
Msa1306290 AT1G34670.1 43.182 88 49 1 94 180 12 99 5.44e-17 77.8
Msa1306290 AT5G40330.1 40.698 86 50 1 96 180 14 99 5.99e-17 75.9
Msa1306290 AT5G40330.1 36.275 102 61 3 44 143 14 113 5.72e-13 65.1
Msa1306290 AT4G26930.1 45.455 88 47 1 94 180 19 106 6.00e-17 77.8
Msa1306290 AT1G25340.1 43.023 86 48 1 96 180 20 105 7.12e-17 76.6
Msa1306290 AT1G35515.1 40.698 86 50 1 96 180 14 99 7.48e-17 75.5
Msa1306290 AT1G35515.1 33.000 100 65 2 44 142 14 112 4.43e-11 59.7
Msa1306290 AT1G68320.1 40.449 89 52 1 93 180 18 106 1.02e-16 76.3
Msa1306290 AT3G46130.1 44.186 86 47 1 96 180 11 96 1.17e-16 75.5
Msa1306290 AT3G46130.1 37.624 101 59 3 44 142 11 109 4.50e-12 63.2
Msa1306290 AT3G24310.1 43.678 87 46 2 96 180 20 105 1.71e-16 75.5
Msa1306290 AT5G60890.1 43.023 86 48 1 96 180 14 99 1.82e-16 75.5
Msa1306290 AT1G25340.2 42.353 85 45 1 96 180 20 100 1.98e-16 75.5
Msa1306290 AT5G10280.1 43.820 89 47 2 94 180 12 99 2.04e-16 75.9
Msa1306290 AT5G10280.1 34.000 100 64 2 44 142 14 112 1.11e-11 62.4
Msa1306290 AT5G54230.1 41.860 86 49 1 96 180 14 99 2.24e-16 75.5
Msa1306290 AT1G25340.3 42.353 85 45 1 96 180 20 100 2.42e-16 75.5
Msa1306290 AT3G08500.1 42.222 90 51 1 92 180 28 117 2.65e-16 75.5
Msa1306290 AT4G34990.1 41.860 86 49 1 96 180 14 99 2.75e-16 74.7
Msa1306290 AT4G34990.1 32.353 102 67 2 42 142 12 112 8.23e-11 59.7
Msa1306290 AT3G27920.1 40.659 91 53 1 91 180 11 101 2.84e-16 73.9
Msa1306290 AT3G27920.1 34.513 113 70 3 32 142 4 114 3.29e-12 63.2
Msa1306290 AT4G38620.1 41.860 86 49 1 96 180 14 99 3.80e-16 74.7
Msa1306290 AT4G38620.1 34.314 102 65 2 42 142 12 112 2.16e-12 64.3
Msa1306290 AT2G31180.1 43.023 86 48 1 96 180 14 99 4.60e-16 73.9
Msa1306290 AT3G48920.1 44.186 86 47 1 96 180 20 105 5.54e-16 73.9
Msa1306290 AT5G40350.1 43.023 86 48 1 96 180 19 104 6.59e-16 72.8
Msa1306290 AT3G01530.1 44.186 86 47 1 96 180 27 112 6.73e-16 72.8
Msa1306290 AT1G57560.2 42.697 89 48 2 94 180 12 99 6.74e-16 73.9
Msa1306290 AT4G09460.1 40.698 86 50 1 96 180 14 99 7.78e-16 73.2
Msa1306290 AT1G57560.1 42.697 89 48 2 94 180 12 99 8.33e-16 73.9
Msa1306290 AT5G26660.1 44.944 89 46 2 94 180 12 99 8.98e-16 74.3
Msa1306290 AT4G01680.3 42.045 88 50 1 94 180 12 99 1.05e-15 72.8
Msa1306290 AT4G01680.3 34.375 96 61 2 44 138 14 108 7.17e-11 59.7
Msa1306290 AT1G09540.1 43.820 89 47 2 94 180 12 99 1.33e-15 73.9
Msa1306290 AT3G28470.1 41.860 86 49 1 96 180 14 99 1.34e-15 73.6
Msa1306290 AT1G22640.1 39.535 86 51 1 96 180 14 99 1.85e-15 72.4
Msa1306290 AT1G22640.1 35.000 100 63 2 44 142 14 112 2.09e-13 66.6
Msa1306290 AT3G13890.2 43.023 86 48 1 96 180 14 99 1.86e-15 73.2
Msa1306290 AT5G56110.1 39.535 86 51 1 96 180 14 99 1.90e-15 73.2
Msa1306290 AT3G01140.1 42.391 92 44 2 94 180 55 142 1.95e-15 73.6
Msa1306290 AT3G01140.2 42.391 92 44 2 94 180 12 99 2.06e-15 73.2
Msa1306290 AT1G63910.1 43.023 86 48 1 96 180 14 99 2.91e-15 72.8
Msa1306290 AT1G18570.1 40.909 88 51 1 94 180 13 100 3.05e-15 72.8
Msa1306290 AT3G27810.1 41.860 86 49 1 96 180 22 107 3.45e-15 71.2
Msa1306290 AT3G60460.1 43.678 87 47 2 96 180 13 99 3.76e-15 72.0
Msa1306290 AT2G16720.1 41.111 90 44 2 96 180 14 99 3.88e-15 71.6
Msa1306290 AT2G16720.1 33.000 100 65 2 44 142 14 112 6.04e-11 60.1
Msa1306290 AT5G15310.4 41.573 89 43 2 94 177 12 96 4.20e-15 71.2
Msa1306290 AT4G01680.1 42.045 88 50 1 94 180 12 99 4.31e-15 72.0
Msa1306290 AT4G01680.1 34.375 96 61 2 44 138 14 108 6.11e-11 60.5
Msa1306290 AT1G66230.1 43.820 89 47 2 94 180 12 99 4.48e-15 71.6
Msa1306290 AT1G48000.1 36.047 86 54 1 96 180 34 119 4.52e-15 71.2
Msa1306290 AT1G74080.1 40.230 87 43 2 94 175 12 94 4.77e-15 72.0
Msa1306290 AT1G74080.1 32.000 100 66 2 44 142 14 112 1.37e-11 62.4
Msa1306290 AT4G12350.1 42.529 87 47 2 96 180 14 99 5.00e-15 71.6
Msa1306290 AT5G14340.1 41.573 89 49 2 94 180 24 111 5.60e-15 71.2
Msa1306290 AT5G15310.2 41.573 89 43 2 94 177 12 96 9.10e-15 71.2
Msa1306290 AT5G15310.1 41.304 92 45 2 94 180 12 99 9.31e-15 71.2
Msa1306290 AT4G25560.1 43.023 86 48 1 96 180 12 97 1.25e-14 70.5
Msa1306290 AT3G13890.1 40.000 95 47 2 96 180 14 108 1.70e-14 70.9
Msa1306290 AT5G62470.1 40.000 85 51 0 96 180 14 98 1.83e-14 70.5
Msa1306290 AT5G62470.1 27.193 114 82 1 44 157 14 126 5.94e-11 60.5
Msa1306290 AT3G62610.1 41.860 86 49 1 96 180 14 99 2.34e-14 70.1
Msa1306290 AT4G22680.1 42.529 87 47 2 96 180 14 99 2.62e-14 69.3
Msa1306290 AT5G16600.1 42.697 89 48 2 94 180 12 99 4.08e-14 69.3
Msa1306290 AT3G06490.1 38.202 89 54 1 93 180 18 106 5.86e-14 68.9
Msa1306290 AT5G52600.1 39.535 86 51 1 96 180 14 99 6.56e-14 67.4
Msa1306290 AT4G01680.2 39.000 100 48 2 94 180 12 111 7.12e-14 68.9
Msa1306290 AT5G49330.1 39.130 92 47 2 94 180 12 99 7.64e-14 68.6
Msa1306290 AT3G13540.1 37.778 90 47 2 96 180 25 110 7.78e-14 67.8
Msa1306290 AT1G79180.2 34.146 123 39 2 96 180 16 134 9.34e-14 68.6
Msa1306290 AT1G74430.1 40.909 88 51 1 94 180 12 99 1.20e-13 67.4
Msa1306290 AT2G47460.1 40.698 86 50 1 96 180 14 99 1.67e-13 67.8
Msa1306290 AT1G18710.1 37.778 90 47 2 96 180 14 99 1.87e-13 67.0
Msa1306290 AT2G26950.1 38.202 89 52 2 94 180 16 103 2.12e-13 67.8
Msa1306290 AT5G62320.1 40.625 96 47 3 94 180 13 107 3.57e-13 65.9
Msa1306290 AT5G62470.2 38.889 90 46 2 96 180 14 99 4.22e-13 66.6
Msa1306290 AT5G35550.1 37.079 89 55 1 93 180 13 101 5.01e-13 65.9
Msa1306290 AT1G74650.1 40.698 86 50 1 96 180 14 99 5.28e-13 66.2
Msa1306290 AT5G07690.1 39.773 88 52 1 94 180 12 99 6.15e-13 66.2
Msa1306290 AT5G07700.1 39.773 88 52 1 94 180 12 99 7.39e-13 65.9
Msa1306290 AT5G07700.2 39.773 88 52 1 94 180 12 99 7.39e-13 65.9
Msa1306290 AT5G49620.1 37.079 89 55 1 93 180 25 113 9.40e-13 65.5
Msa1306290 AT1G08810.1 39.535 86 51 1 96 180 14 99 1.58e-12 64.7
Msa1306290 AT3G28910.1 38.372 86 52 1 96 180 14 99 2.56e-12 64.3
Msa1306290 AT5G61420.2 38.636 88 53 1 94 180 12 99 2.64e-12 64.3
Msa1306290 AT5G52260.1 42.529 87 47 2 96 180 14 99 2.92e-12 63.5
Msa1306290 AT3G47600.1 37.778 90 47 2 96 180 14 99 3.34e-12 63.9
Msa1306290 AT5G14750.3 47.368 57 28 1 126 180 13 69 1.09e-11 60.8
Msa1306290 AT3G12820.2 51.923 52 25 0 129 180 2 53 1.12e-11 61.2
Msa1306290 AT1G09770.1 38.824 85 51 1 94 177 4 88 2.75e-11 62.0
Msa1306290 AT1G09770.1 35.238 105 65 3 40 143 2 104 7.54e-11 60.5
Msa1306290 AT3G53200.2 48.077 52 27 0 129 180 12 63 3.02e-11 60.1
Msa1306290 AT3G49690.1 37.931 87 52 2 96 180 14 100 5.47e-11 60.5
Msa1306290 AT5G65790.1 36.782 87 53 2 96 180 14 100 6.98e-11 60.5
Msa1306290 AT1G66370.1 36.364 88 55 1 94 180 8 95 7.65e-11 59.7
Msa1306290 AT2G36890.1 36.782 87 53 2 96 180 14 100 7.96e-11 60.1

Find 41 sgRNAs with CRISPR-Local

Find 236 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCGAGCTTGTTAAGATAAA+TGG 0.141546 8_4:-1125847 Msa1306290:CDS
CTTGCAGCTGCTTGTGTTAC+TGG 0.142973 8_4:-1126074 Msa1306290:intron
CAAGAAAGCAATTCCGTTCT+TGG 0.201902 8_4:-1127651 Msa1306290:CDS
ATCAAGACTCACAAAATATA+TGG 0.210499 8_4:-1125580 Msa1306290:CDS
CCTTTAGTTGATCTTCTTGT+AGG 0.220569 8_4:+1126742 None:intergenic
ATACCTTCCATGCAGAAATT+TGG 0.243914 8_4:+1125537 None:intergenic
TCTTTATATCTGGATTTAAA+TGG 0.268979 8_4:+1125638 None:intergenic
TAGAGTCGACTCCTCTTCTT+TGG 0.300498 8_4:+1125603 None:intergenic
ACAAAATATATGGGAATAGT+TGG 0.337373 8_4:-1125570 Msa1306290:CDS
ATGTTCAATGTCTGCATCGC+TGG 0.431569 8_4:-1126043 Msa1306290:CDS
GCGAGCTTGTTAAGATAAAT+GGG 0.446526 8_4:-1125846 Msa1306290:CDS
AACATGACAAAGATTTGAAT+CGG 0.447727 8_4:-1127692 Msa1306290:CDS
CAAAGGACCTTGGTCAGAAC+AGG 0.449291 8_4:-1125994 Msa1306290:intron
GACTCCTCTTCTTTGGTCCA+TGG 0.454598 8_4:+1125610 None:intergenic
CAAGGTCCTTTGATAAGATC+AGG 0.456953 8_4:+1126005 None:intergenic
CACTAACCGTTGTTGAATAG+AGG 0.469040 8_4:+1127614 None:intergenic
TTTACCTATGCGACCTGGTA+AGG 0.469131 8_4:+1125795 None:intergenic
TCAAGACTCACAAAATATAT+GGG 0.469743 8_4:-1125579 Msa1306290:CDS
CAAAATATATGGGAATAGTT+GGG 0.478966 8_4:-1125569 Msa1306290:CDS
ATGTCTGCATCGCTGGCAAA+AGG 0.482193 8_4:-1126036 Msa1306290:CDS
TAGGTAAACAATGTAGAGAA+AGG 0.521859 8_4:-1125780 Msa1306290:intron
CAGGTAGCAAAGTCCTTACC+AGG 0.531555 8_4:-1125808 Msa1306290:CDS
TAGCCAAATTTCTGCATGGA+AGG 0.541115 8_4:-1125540 Msa1306290:CDS
GAAGATCAACTAAAGGAGGC+TGG 0.544707 8_4:-1126735 Msa1306290:CDS
ATTTGTACCTGTTCTGACCA+AGG 0.555478 8_4:+1125987 None:intergenic
CTGAATCCTGATCTTATCAA+AGG 0.558658 8_4:-1126011 Msa1306290:CDS
ACATGACAAAGATTTGAATC+GGG 0.560128 8_4:-1127691 Msa1306290:CDS
AACCGTTGTTGAATAGAGGC+AGG 0.565230 8_4:+1127618 None:intergenic
ATGACTAATAGAAGGGTGAC+TGG 0.565778 8_4:-1126766 Msa1306290:intron
CTGATCTTATCAAAGGACCT+TGG 0.567133 8_4:-1126004 Msa1306290:CDS
CCTACAAGAAGATCAACTAA+AGG 0.583785 8_4:-1126742 Msa1306290:CDS
AGGAGGCTGGACAGAGAAGG+AGG 0.589108 8_4:-1126722 Msa1306290:intron
CATTGTTTACCTATGCGACC+TGG 0.593105 8_4:+1125790 None:intergenic
CAGATATAAAGAAAACTCCA+TGG 0.607480 8_4:-1125627 Msa1306290:CDS
ACAAGAAGATCAACTAAAGG+AGG 0.608718 8_4:-1126739 Msa1306290:CDS
TAAAGGAGGCTGGACAGAGA+AGG 0.611791 8_4:-1126725 Msa1306290:CDS
AACTCCATGGACCAAAGAAG+AGG 0.612896 8_4:-1125614 Msa1306290:CDS
AAGTCCTTACCAGGTCGCAT+AGG 0.617150 8_4:-1125799 Msa1306290:CDS
GAAATAGCCAAATTTCTGCA+TGG 0.618995 8_4:-1125544 Msa1306290:CDS
AGGTCTTTGAGTTCCAAGAA+CGG 0.645576 8_4:+1127638 None:intergenic
GACCTGCCTCTATTCAACAA+CGG 0.701726 8_4:-1127620 Msa1306290:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATATATAGTTTAAAATTG+CGG + chr8_4:1125836-1125855 None:intergenic 10.0%
!! ATTAAAAAATCTATTTGATT+TGG - chr8_4:1127063-1127082 Msa1306290:intron 10.0%
!!! ATATATATAGTTTAAAATTG+CGG + chr8_4:1125836-1125855 None:intergenic 10.0%
!! ATTAAAAAATCTATTTGATT+TGG - chr8_4:1127063-1127082 Msa1306290:intron 10.0%
!! ATTACTAACATACATAAATA+GGG + chr8_4:1125876-1125895 None:intergenic 15.0%
!! TATTACTAACATACATAAAT+AGG + chr8_4:1125877-1125896 None:intergenic 15.0%
!! ATGTATGTTAGTAATATTAT+AGG - chr8_4:1125881-1125900 Msa1306290:intron 15.0%
!!! CATTATTTTGTTTTCATATT+TGG + chr8_4:1125925-1125944 None:intergenic 15.0%
!!! ATTCTTTTTAATACTATTAG+TGG + chr8_4:1126075-1126094 None:intergenic 15.0%
!! GTATTAAAAAGAATTTCAAT+TGG - chr8_4:1126081-1126100 Msa1306290:intron 15.0%
!!! GTAATTTTAAAAGACTATTT+CGG + chr8_4:1127034-1127053 None:intergenic 15.0%
!!! ACATTTTTTGTTTTTCTTTT+AGG - chr8_4:1127561-1127580 Msa1306290:intron 15.0%
!! ATTACTAACATACATAAATA+GGG + chr8_4:1125876-1125895 None:intergenic 15.0%
!! TATTACTAACATACATAAAT+AGG + chr8_4:1125877-1125896 None:intergenic 15.0%
!! ATGTATGTTAGTAATATTAT+AGG - chr8_4:1125881-1125900 Msa1306290:intron 15.0%
!!! CATTATTTTGTTTTCATATT+TGG + chr8_4:1125925-1125944 None:intergenic 15.0%
!!! ATTCTTTTTAATACTATTAG+TGG + chr8_4:1126075-1126094 None:intergenic 15.0%
!! GTATTAAAAAGAATTTCAAT+TGG - chr8_4:1126081-1126100 Msa1306290:intron 15.0%
!!! GTAATTTTAAAAGACTATTT+CGG + chr8_4:1127034-1127053 None:intergenic 15.0%
!!! ACATTTTTTGTTTTTCTTTT+AGG - chr8_4:1127561-1127580 Msa1306290:intron 15.0%
!!! AAGTAACTTTAAGAATTGAA+TGG + chr8_4:1126547-1126566 None:intergenic 20.0%
!!! AAAAGTATAATGGAAAAAGT+TGG - chr8_4:1126692-1126711 Msa1306290:intron 20.0%
!!! GAAGAAAGTATGAAAATTTA+TGG + chr8_4:1126742-1126761 None:intergenic 20.0%
!!! AATCTATTTGATTTGGAAAA+TGG - chr8_4:1127070-1127089 Msa1306290:intron 20.0%
!!! ATCTATTTGATTTGGAAAAT+GGG - chr8_4:1127071-1127090 Msa1306290:intron 20.0%
!! TAATAATTAACCACTGAAAT+TGG - chr8_4:1127302-1127321 Msa1306290:intron 20.0%
!!! TTTTAATTAACCACTGAATT+TGG - chr8_4:1127336-1127355 Msa1306290:intron 20.0%
!! AGATAAATGGGAAAAAAAAT+TGG - chr8_4:1127396-1127415 Msa1306290:intron 20.0%
!!! TTTTTTGTTTTTCTTTTAGG+TGG - chr8_4:1127564-1127583 Msa1306290:intron 20.0%
!! TCTTTATATCTGGATTTAAA+TGG + chr8_4:1127595-1127614 None:intergenic 20.0%
!!! AAGTAACTTTAAGAATTGAA+TGG + chr8_4:1126547-1126566 None:intergenic 20.0%
!!! AAAAGTATAATGGAAAAAGT+TGG - chr8_4:1126692-1126711 Msa1306290:intron 20.0%
!!! GAAGAAAGTATGAAAATTTA+TGG + chr8_4:1126742-1126761 None:intergenic 20.0%
!!! AATCTATTTGATTTGGAAAA+TGG - chr8_4:1127070-1127089 Msa1306290:intron 20.0%
!!! ATCTATTTGATTTGGAAAAT+GGG - chr8_4:1127071-1127090 Msa1306290:intron 20.0%
!! TAATAATTAACCACTGAAAT+TGG - chr8_4:1127302-1127321 Msa1306290:intron 20.0%
!!! TTTTAATTAACCACTGAATT+TGG - chr8_4:1127336-1127355 Msa1306290:intron 20.0%
!! AGATAAATGGGAAAAAAAAT+TGG - chr8_4:1127396-1127415 Msa1306290:intron 20.0%
!!! TTTTTTGTTTTTCTTTTAGG+TGG - chr8_4:1127564-1127583 Msa1306290:intron 20.0%
!! TCTTTATATCTGGATTTAAA+TGG + chr8_4:1127595-1127614 None:intergenic 20.0%
! AACATGACAAAGATTTGAAT+CGG - chr8_4:1125538-1125557 Msa1306290:CDS 25.0%
! GAAACAATCTAATCTTAGAA+AGG - chr8_4:1125683-1125702 Msa1306290:intron 25.0%
! AAAGGTTTATGTGACATTAT+AGG - chr8_4:1125733-1125752 Msa1306290:intron 25.0%
!! TTGTTTTCATATTTGGCAAT+TGG + chr8_4:1125918-1125937 None:intergenic 25.0%
! CAAATAATGCAAAACTAGAA+AGG + chr8_4:1126359-1126378 None:intergenic 25.0%
! TTCTATTAGTCATGATAACA+AGG + chr8_4:1126457-1126476 None:intergenic 25.0%
! TTGTTATCATGACTAATAGA+AGG - chr8_4:1126456-1126475 Msa1306290:intron 25.0%
! TGTTATCATGACTAATAGAA+GGG - chr8_4:1126457-1126476 Msa1306290:intron 25.0%
!! TGTATACATGATGATGTTAT+TGG + chr8_4:1126608-1126627 None:intergenic 25.0%
!!! TTTCTTGTTTTCTCATTTAC+AGG - chr8_4:1126645-1126664 Msa1306290:intron 25.0%
!! TTTTCATACTTTCTTCTCTT+AGG - chr8_4:1126746-1126765 Msa1306290:CDS 25.0%
! AAAACATCGATCTTGAAATT+TGG + chr8_4:1126896-1126915 None:intergenic 25.0%
! TTAAAAGACTATTTCGGATT+TGG + chr8_4:1127028-1127047 None:intergenic 25.0%
! ATCAAGACTCACAAAATATA+TGG - chr8_4:1127650-1127669 Msa1306290:CDS 25.0%
! TCAAGACTCACAAAATATAT+GGG - chr8_4:1127651-1127670 Msa1306290:CDS 25.0%
! ACAAAATATATGGGAATAGT+TGG - chr8_4:1127660-1127679 Msa1306290:CDS 25.0%
! CAAAATATATGGGAATAGTT+GGG - chr8_4:1127661-1127680 Msa1306290:CDS 25.0%
! AACATGACAAAGATTTGAAT+CGG - chr8_4:1125538-1125557 Msa1306290:CDS 25.0%
! GAAACAATCTAATCTTAGAA+AGG - chr8_4:1125683-1125702 Msa1306290:intron 25.0%
! AAAGGTTTATGTGACATTAT+AGG - chr8_4:1125733-1125752 Msa1306290:intron 25.0%
!! TTGTTTTCATATTTGGCAAT+TGG + chr8_4:1125918-1125937 None:intergenic 25.0%
! CAAATAATGCAAAACTAGAA+AGG + chr8_4:1126359-1126378 None:intergenic 25.0%
! TTCTATTAGTCATGATAACA+AGG + chr8_4:1126457-1126476 None:intergenic 25.0%
! TTGTTATCATGACTAATAGA+AGG - chr8_4:1126456-1126475 Msa1306290:intron 25.0%
! TGTTATCATGACTAATAGAA+GGG - chr8_4:1126457-1126476 Msa1306290:intron 25.0%
!! TGTATACATGATGATGTTAT+TGG + chr8_4:1126608-1126627 None:intergenic 25.0%
!!! TTTCTTGTTTTCTCATTTAC+AGG - chr8_4:1126645-1126664 Msa1306290:intron 25.0%
!! TTTTCATACTTTCTTCTCTT+AGG - chr8_4:1126746-1126765 Msa1306290:CDS 25.0%
! AAAACATCGATCTTGAAATT+TGG + chr8_4:1126896-1126915 None:intergenic 25.0%
! TTAAAAGACTATTTCGGATT+TGG + chr8_4:1127028-1127047 None:intergenic 25.0%
! ATCAAGACTCACAAAATATA+TGG - chr8_4:1127650-1127669 Msa1306290:CDS 25.0%
! TCAAGACTCACAAAATATAT+GGG - chr8_4:1127651-1127670 Msa1306290:CDS 25.0%
! ACAAAATATATGGGAATAGT+TGG - chr8_4:1127660-1127679 Msa1306290:CDS 25.0%
! CAAAATATATGGGAATAGTT+GGG - chr8_4:1127661-1127680 Msa1306290:CDS 25.0%
ACATGACAAAGATTTGAATC+GGG - chr8_4:1125539-1125558 Msa1306290:CDS 30.0%
TGACTGAATAGAAATAGAAC+AGG + chr8_4:1125646-1125665 None:intergenic 30.0%
TCTTTATATTACAGCTGATG+CGG - chr8_4:1125791-1125810 Msa1306290:CDS 30.0%
!!! GAGTGTCTAATTTTAGCTTT+CGG - chr8_4:1125956-1125975 Msa1306290:intron 30.0%
!!! CTAGTTTTGCATTATTTGTG+TGG - chr8_4:1126361-1126380 Msa1306290:intron 30.0%
TATTGGCAAGAAATTCTCTT+TGG + chr8_4:1126591-1126610 None:intergenic 30.0%
GGAAAAAGTTGGAAAAAGAT+AGG - chr8_4:1126703-1126722 Msa1306290:intron 30.0%
GCTATTGAAATAGTCAGATT+TGG - chr8_4:1126797-1126816 Msa1306290:intron 30.0%
TAGGTAAACAATGTAGAGAA+AGG - chr8_4:1127450-1127469 Msa1306290:intron 30.0%
! CATGGAGTTTTCTTTATATC+TGG + chr8_4:1127605-1127624 None:intergenic 30.0%
CAGATATAAAGAAAACTCCA+TGG - chr8_4:1127603-1127622 Msa1306290:intron 30.0%
ACATGACAAAGATTTGAATC+GGG - chr8_4:1125539-1125558 Msa1306290:CDS 30.0%
TGACTGAATAGAAATAGAAC+AGG + chr8_4:1125646-1125665 None:intergenic 30.0%
TCTTTATATTACAGCTGATG+CGG - chr8_4:1125791-1125810 Msa1306290:CDS 30.0%
!!! GAGTGTCTAATTTTAGCTTT+CGG - chr8_4:1125956-1125975 Msa1306290:intron 30.0%
!!! CTAGTTTTGCATTATTTGTG+TGG - chr8_4:1126361-1126380 Msa1306290:intron 30.0%
TATTGGCAAGAAATTCTCTT+TGG + chr8_4:1126591-1126610 None:intergenic 30.0%
GGAAAAAGTTGGAAAAAGAT+AGG - chr8_4:1126703-1126722 Msa1306290:intron 30.0%
GCTATTGAAATAGTCAGATT+TGG - chr8_4:1126797-1126816 Msa1306290:intron 30.0%
TAGGTAAACAATGTAGAGAA+AGG - chr8_4:1127450-1127469 Msa1306290:intron 30.0%
! CATGGAGTTTTCTTTATATC+TGG + chr8_4:1127605-1127624 None:intergenic 30.0%
CAGATATAAAGAAAACTCCA+TGG - chr8_4:1127603-1127622 Msa1306290:intron 30.0%
CATGTGCAGTTACATCAAAA+AGG - chr8_4:1125715-1125734 Msa1306290:intron 35.0%
AAATTAGACACTCTATCAGC+TGG + chr8_4:1125949-1125968 None:intergenic 35.0%
TAATACTATTAGTGGCAGTC+TGG + chr8_4:1126067-1126086 None:intergenic 35.0%
ACCAGAGTTCGAATTATCAT+TGG - chr8_4:1126183-1126202 Msa1306290:intron 35.0%
ACCAATGATAATTCGAACTC+TGG + chr8_4:1126187-1126206 None:intergenic 35.0%
ATGACCTTTATGTGAATGCA+TGG - chr8_4:1126270-1126289 Msa1306290:intron 35.0%
TGACCTTTATGTGAATGCAT+GGG - chr8_4:1126271-1126290 Msa1306290:intron 35.0%
CCTTTAGTTGATCTTCTTGT+AGG + chr8_4:1126491-1126510 None:intergenic 35.0%
CCTACAAGAAGATCAACTAA+AGG - chr8_4:1126488-1126507 Msa1306290:intron 35.0%
ACAAGAAGATCAACTAAAGG+AGG - chr8_4:1126491-1126510 Msa1306290:intron 35.0%
TCTTTGGTTGAACAGTTTCT+TGG + chr8_4:1126575-1126594 None:intergenic 35.0%
! GCTGCTGTGAAAAAGTATAA+TGG - chr8_4:1126682-1126701 Msa1306290:intron 35.0%
CATTCACGTAGTAAACAGAT+CGG + chr8_4:1126982-1127001 None:intergenic 35.0%
CTGAATCCTGATCTTATCAA+AGG - chr8_4:1127219-1127238 Msa1306290:intron 35.0%
AGCATAATCTCCAATTTCAG+TGG + chr8_4:1127315-1127334 None:intergenic 35.0%
!! AGCGAGCTTGTTAAGATAAA+TGG - chr8_4:1127383-1127402 Msa1306290:intron 35.0%
!! GCGAGCTTGTTAAGATAAAT+GGG - chr8_4:1127384-1127403 Msa1306290:intron 35.0%
! TGGGAAAAAAAATTGGTCTC+AGG - chr8_4:1127403-1127422 Msa1306290:intron 35.0%
GAAATAGCCAAATTTCTGCA+TGG - chr8_4:1127686-1127705 Msa1306290:CDS 35.0%
ATACCTTCCATGCAGAAATT+TGG + chr8_4:1127696-1127715 None:intergenic 35.0%
CATGTGCAGTTACATCAAAA+AGG - chr8_4:1125715-1125734 Msa1306290:intron 35.0%
AAATTAGACACTCTATCAGC+TGG + chr8_4:1125949-1125968 None:intergenic 35.0%
TAATACTATTAGTGGCAGTC+TGG + chr8_4:1126067-1126086 None:intergenic 35.0%
ACCAGAGTTCGAATTATCAT+TGG - chr8_4:1126183-1126202 Msa1306290:intron 35.0%
ACCAATGATAATTCGAACTC+TGG + chr8_4:1126187-1126206 None:intergenic 35.0%
ATGACCTTTATGTGAATGCA+TGG - chr8_4:1126270-1126289 Msa1306290:intron 35.0%
TGACCTTTATGTGAATGCAT+GGG - chr8_4:1126271-1126290 Msa1306290:intron 35.0%
CCTTTAGTTGATCTTCTTGT+AGG + chr8_4:1126491-1126510 None:intergenic 35.0%
CCTACAAGAAGATCAACTAA+AGG - chr8_4:1126488-1126507 Msa1306290:intron 35.0%
ACAAGAAGATCAACTAAAGG+AGG - chr8_4:1126491-1126510 Msa1306290:intron 35.0%
TCTTTGGTTGAACAGTTTCT+TGG + chr8_4:1126575-1126594 None:intergenic 35.0%
! GCTGCTGTGAAAAAGTATAA+TGG - chr8_4:1126682-1126701 Msa1306290:intron 35.0%
CATTCACGTAGTAAACAGAT+CGG + chr8_4:1126982-1127001 None:intergenic 35.0%
CTGAATCCTGATCTTATCAA+AGG - chr8_4:1127219-1127238 Msa1306290:intron 35.0%
AGCATAATCTCCAATTTCAG+TGG + chr8_4:1127315-1127334 None:intergenic 35.0%
!! AGCGAGCTTGTTAAGATAAA+TGG - chr8_4:1127383-1127402 Msa1306290:intron 35.0%
!! GCGAGCTTGTTAAGATAAAT+GGG - chr8_4:1127384-1127403 Msa1306290:intron 35.0%
! TGGGAAAAAAAATTGGTCTC+AGG - chr8_4:1127403-1127422 Msa1306290:intron 35.0%
GAAATAGCCAAATTTCTGCA+TGG - chr8_4:1127686-1127705 Msa1306290:CDS 35.0%
ATACCTTCCATGCAGAAATT+TGG + chr8_4:1127696-1127715 None:intergenic 35.0%
CAAGAAAGCAATTCCGTTCT+TGG - chr8_4:1125579-1125598 Msa1306290:CDS 40.0%
! AGGTCTTTGAGTTCCAAGAA+CGG + chr8_4:1125595-1125614 None:intergenic 40.0%
CACTAACCGTTGTTGAATAG+AGG + chr8_4:1125619-1125638 None:intergenic 40.0%
! TATAGGTTAGCTGCGATTCT+AGG - chr8_4:1125750-1125769 Msa1306290:intron 40.0%
AAACATGCGATAACTCTAGC+TGG + chr8_4:1126014-1126033 None:intergenic 40.0%
AGCTAGAGTTATCGCATGTT+TGG - chr8_4:1126013-1126032 Msa1306290:CDS 40.0%
TATCGCATGTTTGGCGAAAA+AGG - chr8_4:1126022-1126041 Msa1306290:CDS 40.0%
GATCCCATGCATTCACATAA+AGG + chr8_4:1126277-1126296 None:intergenic 40.0%
ATGACTAATAGAAGGGTGAC+TGG - chr8_4:1126464-1126483 Msa1306290:intron 40.0%
ACAAATTCCACGTACTCACA+CGG - chr8_4:1126833-1126852 Msa1306290:intron 40.0%
GTATTAGTATCGTTCACGCT+TGG - chr8_4:1126865-1126884 Msa1306290:intron 40.0%
GTAAACAGATCGGTAACTGT+TGG + chr8_4:1126972-1126991 None:intergenic 40.0%
CAAGGTCCTTTGATAAGATC+AGG + chr8_4:1127228-1127247 None:intergenic 40.0%
CTGATCTTATCAAAGGACCT+TGG - chr8_4:1127226-1127245 Msa1306290:intron 40.0%
ATTTGTACCTGTTCTGACCA+AGG + chr8_4:1127246-1127265 None:intergenic 40.0%
TAGCCAAATTTCTGCATGGA+AGG - chr8_4:1127690-1127709 Msa1306290:CDS 40.0%
CAAGAAAGCAATTCCGTTCT+TGG - chr8_4:1125579-1125598 Msa1306290:CDS 40.0%
! AGGTCTTTGAGTTCCAAGAA+CGG + chr8_4:1125595-1125614 None:intergenic 40.0%
CACTAACCGTTGTTGAATAG+AGG + chr8_4:1125619-1125638 None:intergenic 40.0%
! TATAGGTTAGCTGCGATTCT+AGG - chr8_4:1125750-1125769 Msa1306290:intron 40.0%
AAACATGCGATAACTCTAGC+TGG + chr8_4:1126014-1126033 None:intergenic 40.0%
AGCTAGAGTTATCGCATGTT+TGG - chr8_4:1126013-1126032 Msa1306290:CDS 40.0%
TATCGCATGTTTGGCGAAAA+AGG - chr8_4:1126022-1126041 Msa1306290:CDS 40.0%
GATCCCATGCATTCACATAA+AGG + chr8_4:1126277-1126296 None:intergenic 40.0%
ATGACTAATAGAAGGGTGAC+TGG - chr8_4:1126464-1126483 Msa1306290:intron 40.0%
ACAAATTCCACGTACTCACA+CGG - chr8_4:1126833-1126852 Msa1306290:intron 40.0%
GTATTAGTATCGTTCACGCT+TGG - chr8_4:1126865-1126884 Msa1306290:intron 40.0%
GTAAACAGATCGGTAACTGT+TGG + chr8_4:1126972-1126991 None:intergenic 40.0%
CAAGGTCCTTTGATAAGATC+AGG + chr8_4:1127228-1127247 None:intergenic 40.0%
CTGATCTTATCAAAGGACCT+TGG - chr8_4:1127226-1127245 Msa1306290:intron 40.0%
ATTTGTACCTGTTCTGACCA+AGG + chr8_4:1127246-1127265 None:intergenic 40.0%
TAGCCAAATTTCTGCATGGA+AGG - chr8_4:1127690-1127709 Msa1306290:CDS 40.0%
GACCTGCCTCTATTCAACAA+CGG - chr8_4:1125610-1125629 Msa1306290:CDS 45.0%
AACCGTTGTTGAATAGAGGC+AGG + chr8_4:1125615-1125634 None:intergenic 45.0%
TGATAATCCAGAACTCGCTC+AGG + chr8_4:1126226-1126245 None:intergenic 45.0%
GAAGATCAACTAAAGGAGGC+TGG - chr8_4:1126495-1126514 Msa1306290:intron 45.0%
CAAATTCCACGTACTCACAC+GGG - chr8_4:1126834-1126853 Msa1306290:intron 45.0%
TAGTATCGTTCACGCTTGGA+TGG - chr8_4:1126869-1126888 Msa1306290:intron 45.0%
! TCGAGATCGAAAGGTGCAAA+AGG + chr8_4:1126948-1126967 None:intergenic 45.0%
ACTGTTGGATCGAGATCGAA+AGG + chr8_4:1126957-1126976 None:intergenic 45.0%
AGTAACACAAGCAGCTGCAA+GGG + chr8_4:1127157-1127176 None:intergenic 45.0%
ATGTTCAATGTCTGCATCGC+TGG - chr8_4:1127187-1127206 Msa1306290:intron 45.0%
CCTGCAAACTCCAAATTCAG+TGG + chr8_4:1127349-1127368 None:intergenic 45.0%
! CCACTGAATTTGGAGTTTGC+AGG - chr8_4:1127346-1127365 Msa1306290:intron 45.0%
TTTACCTATGCGACCTGGTA+AGG + chr8_4:1127438-1127457 None:intergenic 45.0%
CATTGTTTACCTATGCGACC+TGG + chr8_4:1127443-1127462 None:intergenic 45.0%
AACTCCATGGACCAAAGAAG+AGG - chr8_4:1127616-1127635 Msa1306290:intron 45.0%
! TAGAGTCGACTCCTCTTCTT+TGG + chr8_4:1127630-1127649 None:intergenic 45.0%
GACCTGCCTCTATTCAACAA+CGG - chr8_4:1125610-1125629 Msa1306290:CDS 45.0%
AACCGTTGTTGAATAGAGGC+AGG + chr8_4:1125615-1125634 None:intergenic 45.0%
TGATAATCCAGAACTCGCTC+AGG + chr8_4:1126226-1126245 None:intergenic 45.0%
GAAGATCAACTAAAGGAGGC+TGG - chr8_4:1126495-1126514 Msa1306290:intron 45.0%
CAAATTCCACGTACTCACAC+GGG - chr8_4:1126834-1126853 Msa1306290:intron 45.0%
TAGTATCGTTCACGCTTGGA+TGG - chr8_4:1126869-1126888 Msa1306290:intron 45.0%
! TCGAGATCGAAAGGTGCAAA+AGG + chr8_4:1126948-1126967 None:intergenic 45.0%
ACTGTTGGATCGAGATCGAA+AGG + chr8_4:1126957-1126976 None:intergenic 45.0%
AGTAACACAAGCAGCTGCAA+GGG + chr8_4:1127157-1127176 None:intergenic 45.0%
ATGTTCAATGTCTGCATCGC+TGG - chr8_4:1127187-1127206 Msa1306290:intron 45.0%
CCTGCAAACTCCAAATTCAG+TGG + chr8_4:1127349-1127368 None:intergenic 45.0%
! CCACTGAATTTGGAGTTTGC+AGG - chr8_4:1127346-1127365 Msa1306290:intron 45.0%
TTTACCTATGCGACCTGGTA+AGG + chr8_4:1127438-1127457 None:intergenic 45.0%
CATTGTTTACCTATGCGACC+TGG + chr8_4:1127443-1127462 None:intergenic 45.0%
AACTCCATGGACCAAAGAAG+AGG - chr8_4:1127616-1127635 Msa1306290:intron 45.0%
! TAGAGTCGACTCCTCTTCTT+TGG + chr8_4:1127630-1127649 None:intergenic 45.0%
TAATCCAGAACTCGCTCAGG+AGG + chr8_4:1126223-1126242 None:intergenic 50.0%
TAAAGGAGGCTGGACAGAGA+AGG - chr8_4:1126505-1126524 Msa1306290:intron 50.0%
AGCAGCTGCAAGGGATAATG+TGG + chr8_4:1127148-1127167 None:intergenic 50.0%
CAGTAACACAAGCAGCTGCA+AGG + chr8_4:1127158-1127177 None:intergenic 50.0%
CTTGCAGCTGCTTGTGTTAC+TGG - chr8_4:1127156-1127175 Msa1306290:intron 50.0%
ATGTCTGCATCGCTGGCAAA+AGG - chr8_4:1127194-1127213 Msa1306290:intron 50.0%
CAAAGGACCTTGGTCAGAAC+AGG - chr8_4:1127236-1127255 Msa1306290:intron 50.0%
CAGGTAGCAAAGTCCTTACC+AGG - chr8_4:1127422-1127441 Msa1306290:intron 50.0%
AAGTCCTTACCAGGTCGCAT+AGG - chr8_4:1127431-1127450 Msa1306290:intron 50.0%
GACTCCTCTTCTTTGGTCCA+TGG + chr8_4:1127623-1127642 None:intergenic 50.0%
TAATCCAGAACTCGCTCAGG+AGG + chr8_4:1126223-1126242 None:intergenic 50.0%
TAAAGGAGGCTGGACAGAGA+AGG - chr8_4:1126505-1126524 Msa1306290:intron 50.0%
AGCAGCTGCAAGGGATAATG+TGG + chr8_4:1127148-1127167 None:intergenic 50.0%
CAGTAACACAAGCAGCTGCA+AGG + chr8_4:1127158-1127177 None:intergenic 50.0%
CTTGCAGCTGCTTGTGTTAC+TGG - chr8_4:1127156-1127175 Msa1306290:intron 50.0%
ATGTCTGCATCGCTGGCAAA+AGG - chr8_4:1127194-1127213 Msa1306290:intron 50.0%
CAAAGGACCTTGGTCAGAAC+AGG - chr8_4:1127236-1127255 Msa1306290:intron 50.0%
CAGGTAGCAAAGTCCTTACC+AGG - chr8_4:1127422-1127441 Msa1306290:intron 50.0%
AAGTCCTTACCAGGTCGCAT+AGG - chr8_4:1127431-1127450 Msa1306290:intron 50.0%
GACTCCTCTTCTTTGGTCCA+TGG + chr8_4:1127623-1127642 None:intergenic 50.0%
AGCTGATGCGGCTGAGATTG+CGG - chr8_4:1125803-1125822 Msa1306290:CDS 55.0%
ATGAGTCGAACTCGCTCAGG+AGG + chr8_4:1126122-1126141 None:intergenic 55.0%
CACATGAGTCGAACTCGCTC+AGG + chr8_4:1126125-1126144 None:intergenic 55.0%
CTGAGCGAGTTCGACTCATG+TGG - chr8_4:1126123-1126142 Msa1306290:intron 55.0%
CTAACCTCCTGAGCGAGTTC+TGG - chr8_4:1126115-1126134 Msa1306290:intron 55.0%
GCTGGACAGAGAAGGAGGTA+AGG - chr8_4:1126513-1126532 Msa1306290:intron 55.0%
AAGCTACCCGTGTGAGTACG+TGG + chr8_4:1126843-1126862 None:intergenic 55.0%
AGCTGATGCGGCTGAGATTG+CGG - chr8_4:1125803-1125822 Msa1306290:CDS 55.0%
ATGAGTCGAACTCGCTCAGG+AGG + chr8_4:1126122-1126141 None:intergenic 55.0%
CACATGAGTCGAACTCGCTC+AGG + chr8_4:1126125-1126144 None:intergenic 55.0%
CTGAGCGAGTTCGACTCATG+TGG - chr8_4:1126123-1126142 Msa1306290:intron 55.0%
CTAACCTCCTGAGCGAGTTC+TGG - chr8_4:1126115-1126134 Msa1306290:intron 55.0%
GCTGGACAGAGAAGGAGGTA+AGG - chr8_4:1126513-1126532 Msa1306290:intron 55.0%
AAGCTACCCGTGTGAGTACG+TGG + chr8_4:1126843-1126862 None:intergenic 55.0%
AGGAGGCTGGACAGAGAAGG+AGG - chr8_4:1126508-1126527 Msa1306290:intron 60.0%
AGGAGGCTGGACAGAGAAGG+AGG - chr8_4:1126508-1126527 Msa1306290:intron 60.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 1125534 1127718 1125534 ID=Msa1306290;Name=Msa1306290
chr8_4 mRNA 1125534 1127718 1125534 ID=Msa1306290-mRNA-1;Parent=Msa1306290;Name=Msa1306290-mRNA-1;_AED=0.47;_eAED=0.47;_QI=0|0|0|0.5|1|1|6|0|181
chr8_4 exon 1127621 1127718 1127621 ID=Msa1306290-mRNA-1:exon:234;Parent=Msa1306290-mRNA-1
chr8_4 exon 1126723 1126777 1126723 ID=Msa1306290-mRNA-1:exon:233;Parent=Msa1306290-mRNA-1
chr8_4 exon 1126528 1126585 1126528 ID=Msa1306290-mRNA-1:exon:232;Parent=Msa1306290-mRNA-1
chr8_4 exon 1125995 1126089 1125995 ID=Msa1306290-mRNA-1:exon:231;Parent=Msa1306290-mRNA-1
chr8_4 exon 1125781 1125884 1125781 ID=Msa1306290-mRNA-1:exon:230;Parent=Msa1306290-mRNA-1
chr8_4 exon 1125534 1125669 1125534 ID=Msa1306290-mRNA-1:exon:229;Parent=Msa1306290-mRNA-1
chr8_4 CDS 1127621 1127718 1127621 ID=Msa1306290-mRNA-1:cds;Parent=Msa1306290-mRNA-1
chr8_4 CDS 1126723 1126777 1126723 ID=Msa1306290-mRNA-1:cds;Parent=Msa1306290-mRNA-1
chr8_4 CDS 1126528 1126585 1126528 ID=Msa1306290-mRNA-1:cds;Parent=Msa1306290-mRNA-1
chr8_4 CDS 1125995 1126089 1125995 ID=Msa1306290-mRNA-1:cds;Parent=Msa1306290-mRNA-1
chr8_4 CDS 1125781 1125884 1125781 ID=Msa1306290-mRNA-1:cds;Parent=Msa1306290-mRNA-1
chr8_4 CDS 1125534 1125669 1125534 ID=Msa1306290-mRNA-1:cds;Parent=Msa1306290-mRNA-1
Gene Sequence

>Msa1306290

ATGGAACATGACAAAGATTTGAATCGGGCATCAAGTTCTTCAGAACAAGAAAGCAATTCCGTTCTTGGAACTCAAAGACCTGCCTCTATTCAACAACGAAGGGTGACTGGTCCTACAAGAAGATCAACTAAAGGAGGCTGGACAGAGAAGGAGGATAAACTTTTGATTGCTGCTGTGAAAAAGTATAATGGAAAAAGTTGGAAAAAGATAGCTGCTTGTGTTACTGGCAGAACAGATGTTCAATGTCTGCATCGCTGGCAAAAGGTTCTGAATCCTGATCTTATCAAAGGACCTTGGTCAGAACAGGAAGATAATCAACTAAGCGAGCTTGTTAAGATAAATGGGAAAAAAAATTGGTCTCAGGTAGCAAAGTCCTTACCAGGTCGCATAGGTAAACAATGTAGAGAAAGGTGGTATAACCATTTAAATCCAGATATAAAGAAAACTCCATGGACCAAAGAAGAGGAGTCGACTCTAATCAAGACTCACAAAATATATGGGAATAGTTGGGCTGAAATAGCCAAATTTCTGCATGGAAGGTATTGA
Protein sequence

>Msa1306290

MEHDKDLNRASSSSEQESNSVLGTQRPASIQQRRVTGPTRRSTKGGWTEKEDKLLIAAVKKYNGKSWKKIAACVTGRTDVQCLHRWQKVLNPDLIKGPWSEQEDNQLSELVKINGKKNWSQVAKSLPGRIGKQCRERWYNHLNPDIKKTPWTKEEESTLIKTHKIYGNSWAEIAKFLHGRY*