AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1313710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1313710 MtrunA17_Chr8g0342481 83.863 409 51 3 1 402 1 401 0.0 685
Msa1313710 MtrunA17_Chr8g0342481 50.667 150 61 7 297 438 153 297 9.00e-23 100
Msa1313710 MtrunA17_Chr8g0342541 68.317 303 76 10 1 296 1 290 7.33e-127 372
Msa1313710 MtrunA17_Chr8g0342541 53.883 206 67 10 297 485 153 347 1.78e-40 149
Msa1313710 MtrunA17_Chr8g0342521 67.219 302 80 9 1 296 1 289 1.38e-123 364
Msa1313710 MtrunA17_Chr8g0342521 46.639 238 97 10 268 485 120 347 1.28e-38 144
Msa1313710 MtrunA17_Chr2g0330041 56.550 313 103 16 1 286 1 307 1.65e-88 276
Msa1313710 MtrunA17_Chr2g0309911 76.613 124 27 2 1 124 1 122 7.74e-63 207
Msa1313710 MtrunA17_Chr1g0193371 71.774 124 34 1 1 124 1 123 1.12e-59 200
Msa1313710 MtrunA17_Chr1g0193801 70.968 124 35 1 1 124 1 123 1.62e-59 200
Msa1313710 MtrunA17_Chr7g0270891 72.581 124 33 1 1 124 1 123 1.80e-59 199
Msa1313710 MtrunA17_Chr8g0342461 95.556 90 4 0 1 90 1 90 3.86e-59 191
Msa1313710 MtrunA17_Chr8g0342471 94.444 90 5 0 1 90 1 90 1.48e-58 189
Msa1313710 MtrunA17_Chr4g0058631 70.400 125 36 1 1 125 1 124 8.78e-58 195
Msa1313710 MtrunA17_Chr1g0211161 70.732 123 35 1 3 125 4 125 1.03e-57 191
Msa1313710 MtrunA17_Chr3g0117091 70.400 125 36 1 1 125 1 124 2.31e-57 194
Msa1313710 MtrunA17_Chr5g0397231 72.973 111 29 1 1 111 1 110 1.89e-55 188
Msa1313710 MtrunA17_Chr7g0271241 72.581 124 33 1 1 124 1 123 2.55e-55 189
Msa1313710 MtrunA17_Chr8g0387421 70.085 117 34 1 1 117 1 116 5.05e-55 186
Msa1313710 MtrunA17_Chr8g0342531 86.667 90 11 1 1 90 1 89 4.47e-51 171
Msa1313710 MtrunA17_Chr8g0342511 87.500 88 10 1 1 88 1 87 4.97e-51 168
Msa1313710 MtrunA17_Chr8g0385321 61.600 125 47 1 1 125 1 124 2.12e-49 171
Msa1313710 MtrunA17_Chr5g0435101 63.025 119 43 1 6 124 5 122 8.61e-49 167
Msa1313710 MtrunA17_Chr3g0088461 68.807 109 33 1 9 117 19 126 1.11e-48 170
Msa1313710 MtrunA17_Chr4g0037141 60.000 125 49 1 1 125 1 124 1.13e-48 169
Msa1313710 MtrunA17_Chr3g0131121 60.484 124 48 1 1 124 1 123 4.04e-48 167
Msa1313710 MtrunA17_Chr4g0032401 69.159 107 32 1 11 117 16 121 4.16e-47 166
Msa1313710 MtrunA17_Chr3g0115821 53.957 139 60 3 1 136 1 138 4.39e-47 166
Msa1313710 MtrunA17_Chr4g0057031 60.484 124 48 1 1 124 1 123 5.74e-47 164
Msa1313710 MtrunA17_Chr2g0328771 67.925 106 33 1 12 117 20 124 1.33e-46 164
Msa1313710 MtrunA17_Chr3g0110351 60.484 124 48 1 1 124 1 123 1.80e-46 164
Msa1313710 MtrunA17_Chr1g0203411 60.684 117 45 1 1 117 1 116 2.51e-46 163
Msa1313710 MtrunA17_Chr5g0410961 58.871 124 50 1 1 124 1 123 4.61e-46 163
Msa1313710 MtrunA17_Chr5g0434571 60.484 124 48 1 1 124 37 159 6.57e-46 163
Msa1313710 MtrunA17_Chr4g0039971 56.452 124 53 1 1 124 2 124 9.35e-46 163
Msa1313710 MtrunA17_Chr2g0323351 58.678 121 47 2 1 120 1 119 1.67e-45 159
Msa1313710 MtrunA17_Chr4g0044421 60.484 124 48 1 1 124 1 123 1.94e-45 157
Msa1313710 MtrunA17_Chr1g0151941 46.875 160 85 0 1 160 1 160 2.56e-45 159
Msa1313710 MtrunA17_Chr4g0048511 56.716 134 55 3 1 132 1 133 3.25e-45 162
Msa1313710 MtrunA17_Chr2g0323411 44.560 193 99 4 1 191 1 187 5.49e-45 160
Msa1313710 MtrunA17_Chr2g0281071 58.400 125 50 2 1 124 1 124 5.57e-45 160
Msa1313710 MtrunA17_Chr7g0274581 51.049 143 62 2 1 143 1 135 7.86e-45 156
Msa1313710 MtrunA17_Chr6g0453471 55.645 124 54 1 1 124 1 123 3.07e-44 159
Msa1313710 MtrunA17_Chr2g0311221 63.208 106 38 1 6 111 8 112 3.47e-44 158
Msa1313710 MtrunA17_Chr1g0203441 59.836 122 48 1 8 129 9 129 4.03e-44 156
Msa1313710 MtrunA17_Chr4g0042671 55.200 125 55 1 1 125 1 124 7.29e-44 159
Msa1313710 MtrunA17_Chr7g0228891 61.538 117 44 1 1 117 1 116 8.87e-44 155
Msa1313710 MtrunA17_Chr1g0187761 60.684 117 45 1 1 117 1 116 1.09e-43 154
Msa1313710 MtrunA17_Chr4g0070611 57.265 117 49 1 1 117 1 116 1.18e-43 156
Msa1313710 MtrunA17_Chr7g0217741 52.174 138 64 2 1 137 1 137 1.78e-43 155
Msa1313710 MtrunA17_Chr6g0470971 60.504 119 46 1 9 127 11 128 2.26e-43 154
Msa1313710 MtrunA17_Chr4g0070641 57.265 117 49 1 1 117 1 116 2.30e-43 150
Msa1313710 MtrunA17_Chr4g0022901 49.342 152 66 3 5 147 6 155 3.71e-43 154
Msa1313710 MtrunA17_Chr6g0452271 57.258 124 52 1 1 124 1 123 4.36e-43 155
Msa1313710 MtrunA17_Chr8g0349261 56.000 125 54 1 1 124 1 125 6.21e-43 154
Msa1313710 MtrunA17_Chr4g0022931 58.772 114 44 2 5 117 6 117 6.44e-43 153
Msa1313710 MtrunA17_Chr5g0395281 60.177 113 44 1 12 124 12 123 7.25e-43 154
Msa1313710 MtrunA17_Chr1g0167661 56.780 118 50 1 1 118 1 117 1.86e-42 151
Msa1313710 MtrunA17_Chr3g0121241 56.303 119 51 1 6 124 36 153 6.41e-42 151
Msa1313710 MtrunA17_Chr7g0275911 57.265 117 49 1 1 117 1 116 1.68e-41 149
Msa1313710 MtrunA17_Chr7g0261281 56.410 117 50 1 1 117 1 116 1.75e-41 149
Msa1313710 MtrunA17_Chr3g0103281 56.154 130 55 2 1 129 1 129 1.77e-41 150
Msa1313710 MtrunA17_Chr1g0167691 55.932 118 51 1 1 118 1 117 1.87e-41 149
Msa1313710 MtrunA17_Chr1g0194951 39.091 220 96 5 1 217 1 185 3.30e-41 151
Msa1313710 MtrunA17_Chr8g0346561 55.556 117 51 1 1 117 1 116 1.01e-40 148
Msa1313710 MtrunA17_Chr4g0022911 54.032 124 54 3 1 123 1 122 1.54e-40 147
Msa1313710 MtrunA17_Chr4g0028311 54.622 119 54 0 1 119 1 119 4.07e-40 147
Msa1313710 MtrunA17_Chr4g0068061 51.145 131 61 2 1 129 1 130 5.98e-40 147
Msa1313710 MtrunA17_Chr1g0152011 53.782 119 55 0 1 119 1 119 6.00e-40 147
Msa1313710 MtrunA17_Chr5g0400821 52.941 119 56 0 1 119 1 119 5.36e-39 144
Msa1313710 MtrunA17_Chr8g0343831 57.273 110 46 1 8 117 4 112 7.47e-39 141
Msa1313710 MtrunA17_Chr3g0135311 51.261 119 58 0 1 119 1 119 1.22e-38 144
Msa1313710 MtrunA17_Chr4g0055981 58.716 109 44 1 8 116 51 158 2.11e-38 139
Msa1313710 MtrunA17_Chr7g0264641 52.101 119 57 0 1 119 1 119 3.42e-38 140
Msa1313710 MtrunA17_Chr4g0054391 57.273 110 47 0 1 110 1 110 4.09e-38 140
Msa1313710 MtrunA17_Chr2g0327351 54.955 111 50 0 1 111 1 111 8.88e-38 140
Msa1313710 MtrunA17_Chr6g0450101 56.757 111 47 1 11 121 13 122 2.73e-37 136
Msa1313710 MtrunA17_Chr7g0228231 54.622 119 51 2 1 117 1 118 2.95e-37 135
Msa1313710 MtrunA17_Chr7g0217221 52.991 117 54 1 1 117 1 116 5.24e-37 137
Msa1313710 MtrunA17_Chr7g0240821 60.396 101 39 1 17 117 6 105 5.63e-37 135
Msa1313710 MtrunA17_Chr5g0417821 56.140 114 49 1 12 125 7 119 6.50e-37 137
Msa1313710 MtrunA17_Chr4g0022881 54.206 107 48 1 9 115 9 114 1.89e-36 134
Msa1313710 MtrunA17_Chr7g0269831 56.303 119 51 1 1 119 1 118 2.00e-36 137
Msa1313710 MtrunA17_Chr3g0092401 52.991 117 54 1 1 117 2 117 9.44e-36 135
Msa1313710 MtrunA17_Chr4g0072751 52.252 111 53 0 1 111 1 111 1.22e-35 135
Msa1313710 MtrunA17_Chr1g0209661 50.000 126 60 2 8 131 21 145 3.36e-35 133
Msa1313710 MtrunA17_Chr1g0186061 51.786 112 53 1 5 116 13 123 3.47e-35 132
Msa1313710 MtrunA17_Chr1g0168661 52.212 113 53 1 4 116 13 124 4.83e-35 131
Msa1313710 MtrunA17_Chr4g0060721 49.167 120 60 1 1 120 2 120 7.74e-35 133
Msa1313710 MtrunA17_Chr6g0453211 53.153 111 51 1 1 111 1 110 1.56e-34 132
Msa1313710 MtrunA17_Chr4g0022891 55.238 105 46 1 9 113 9 112 1.58e-34 129
Msa1313710 MtrunA17_Chr6g0487491 48.148 135 62 1 1 127 1 135 1.76e-34 130
Msa1313710 MtrunA17_Chr7g0254411 50.427 117 57 1 1 117 1 116 2.04e-34 132
Msa1313710 MtrunA17_Chr1g0194291 53.333 105 48 1 12 116 21 124 2.67e-34 129
Msa1313710 MtrunA17_Chr1g0180391 51.887 106 50 1 12 117 19 123 5.11e-34 128
Msa1313710 MtrunA17_Chr7g0220341 54.545 110 47 2 12 119 25 133 2.54e-33 127
Msa1313710 MtrunA17_Chr1g0154031 53.333 105 48 1 12 116 76 179 2.62e-33 130
Msa1313710 MtrunA17_Chr5g0434931 51.351 111 53 1 12 122 35 144 2.62e-33 127
Msa1313710 MtrunA17_Chr3g0099131 53.333 105 48 1 12 116 41 144 2.98e-33 132
Msa1313710 MtrunA17_Chr4g0042611 57.303 89 37 1 1 89 1 88 3.10e-33 121
Msa1313710 MtrunA17_Chr5g0434911 51.327 113 54 1 7 119 16 127 3.19e-33 127
Msa1313710 MtrunA17_Chr1g0194301 49.524 105 52 1 12 116 33 136 4.43e-33 126
Msa1313710 MtrunA17_Chr3g0080861 42.336 137 76 2 12 148 37 170 2.03e-32 129
Msa1313710 MtrunA17_Chr5g0434831 52.336 107 50 1 12 118 7 112 2.10e-32 122
Msa1313710 MtrunA17_Chr8g0354661 52.381 105 49 1 12 116 37 140 2.17e-32 130
Msa1313710 MtrunA17_Chr2g0327821 49.074 108 54 1 9 116 3 109 5.31e-32 122
Msa1313710 MtrunA17_Chr7g0247131 66.667 81 27 0 44 124 9 89 5.53e-32 123
Msa1313710 MtrunA17_Chr7g0228991 52.778 108 50 1 12 119 29 135 1.07e-31 122
Msa1313710 MtrunA17_Chr8g0360111 53.398 103 47 1 12 114 25 126 4.56e-31 120
Msa1313710 MtrunA17_Chr4g0030881 46.610 118 55 2 6 116 1 117 8.88e-31 120
Msa1313710 MtrunA17_Chr2g0322521 52.294 109 51 1 8 116 25 132 3.97e-30 121
Msa1313710 MtrunA17_Chr5g0434841 49.533 107 53 1 12 118 20 125 5.49e-30 119
Msa1313710 MtrunA17_Chr2g0323321 56.180 89 34 2 7 93 6 91 2.72e-29 111
Msa1313710 MtrunA17_Chr4g0068921 52.885 104 48 1 12 115 24 126 5.82e-29 113
Msa1313710 MtrunA17_Chr8g0334881 51.376 109 51 2 4 111 2 109 7.95e-29 115
Msa1313710 MtrunA17_Chr1g0192411 50.000 106 52 1 11 116 11 115 1.11e-28 117
Msa1313710 MtrunA17_Chr2g0293911 52.885 104 48 1 12 115 24 126 1.80e-28 115
Msa1313710 MtrunA17_Chr5g0440781 48.571 105 52 2 12 115 12 115 1.47e-27 108
Msa1313710 MtrunA17_Chr4g0013361 53.922 102 43 3 12 111 10 109 2.14e-27 111
Msa1313710 MtrunA17_Chr5g0441141 48.571 105 52 2 12 115 12 115 3.65e-27 110
Msa1313710 MtrunA17_Chr5g0440761 48.571 105 52 2 12 115 12 115 3.86e-27 110
Msa1313710 MtrunA17_Chr2g0294811 52.809 89 41 1 1 89 1 88 1.89e-26 103
Msa1313710 MtrunA17_Chr5g0429661 46.602 103 53 1 14 116 122 222 1.40e-25 107
Msa1313710 MtrunA17_Chr5g0441131 44.643 112 60 2 5 115 2 112 2.91e-25 102
Msa1313710 MtrunA17_Chr5g0395221 56.790 81 34 1 9 89 9 88 3.58e-25 99.0
Msa1313710 MtrunA17_Chr7g0229101 61.429 70 27 0 44 113 3 72 3.65e-24 100
Msa1313710 MtrunA17_Chr6g0480581 49.038 104 47 4 14 115 4 103 5.38e-24 100
Msa1313710 MtrunA17_Chr7g0238631 48.571 105 50 3 14 117 113 214 8.36e-24 104
Msa1313710 MtrunA17_Chr5g0434901 58.571 70 29 0 44 113 4 73 1.18e-23 95.9
Msa1313710 MtrunA17_Chr7g0229131 56.000 75 33 0 44 118 3 77 1.98e-23 97.1
Msa1313710 MtrunA17_Chr3g0099141 51.807 83 39 1 12 94 40 121 2.58e-23 95.5
Msa1313710 MtrunA17_Chr4g0008551 45.794 107 54 3 14 119 38 141 3.50e-23 100
Msa1313710 MtrunA17_Chr4g0053431 48.544 103 51 2 14 116 5 105 1.93e-22 97.1
Msa1313710 MtrunA17_Chr3g0139671 45.714 105 53 3 14 117 85 186 4.50e-22 100
Msa1313710 MtrunA17_Chr4g0042501 43.478 115 58 2 2 116 98 205 5.14e-22 98.2
Msa1313710 MtrunA17_Chr5g0417621 45.283 106 56 1 11 116 131 234 5.73e-22 98.2
Msa1313710 MtrunA17_Chr6g0454921 45.299 117 57 4 14 126 15 128 7.66e-22 93.6
Msa1313710 MtrunA17_Chr1g0157731 44.762 105 54 3 14 117 91 192 2.50e-21 97.8
Msa1313710 MtrunA17_Chr5g0401731 47.115 104 51 3 14 116 15 115 3.00e-21 94.7
Msa1313710 MtrunA17_Chr4g0058991 43.119 109 58 3 9 116 204 309 3.15e-21 96.3
Msa1313710 MtrunA17_Chr3g0117511 42.342 111 58 4 9 116 176 283 8.25e-21 94.7
Msa1313710 MtrunA17_Chr3g0125801 47.573 103 52 1 14 116 16 116 8.38e-21 92.8
Msa1313710 MtrunA17_Chr1g0177901 50.000 88 42 2 25 112 5 90 1.83e-20 89.7
Msa1313710 MtrunA17_Chr7g0228531 43.689 103 55 3 14 116 220 319 3.80e-20 92.8
Msa1313710 MtrunA17_Chr6g0453751 48.936 94 36 3 13 94 17 110 6.00e-20 85.9
Msa1313710 MtrunA17_Chr3g0133601 44.660 103 55 2 14 116 37 137 3.62e-19 86.3
Msa1313710 MtrunA17_Chr6g0460661 42.268 97 54 1 11 107 13 107 4.21e-19 84.3
Msa1313710 MtrunA17_Chr5g0425591 44.565 92 49 2 5 95 2 92 5.04e-19 82.0
Msa1313710 MtrunA17_Chr5g0437321 44.554 101 52 3 14 113 19 116 9.05e-19 86.7
Msa1313710 MtrunA17_Chr3g0093811 43.299 97 54 1 44 139 13 109 9.20e-19 86.3
Msa1313710 MtrunA17_Chr7g0228401 44.000 100 52 3 25 124 290 385 1.93e-18 88.2
Msa1313710 MtrunA17_Chr5g0397841 43.750 96 50 3 17 111 113 205 1.08e-17 85.5
Msa1313710 MtrunA17_Chr6g0460671 41.905 105 55 4 14 116 99 199 1.74e-17 84.0
Msa1313710 MtrunA17_Chr7g0254261 41.905 105 57 3 13 116 88 189 1.89e-17 84.0
Msa1313710 MtrunA17_Chr7g0228481 40.952 105 57 4 14 118 220 319 8.36e-17 82.4
Msa1313710 MtrunA17_Chr7g0238651 40.404 99 56 2 13 109 6 103 1.75e-15 77.8
Msa1313710 MtrunA17_Chr7g0233061 35.354 99 60 3 14 112 180 274 2.65e-15 77.4
Msa1313710 MtrunA17_Chr5g0416341 39.000 100 59 2 17 116 29 126 1.34e-14 75.9
Msa1313710 MtrunA17_Chr8g0362231 37.736 106 63 3 17 122 25 127 6.79e-14 73.6
Msa1313710 MtrunA17_Chr5g0434871 57.778 45 19 0 75 119 2 46 4.56e-13 64.3
Msa1313710 MtrunA17_Chr1g0193901 47.619 63 31 2 8 69 7 68 2.34e-12 63.5
Msa1313710 MtrunA17_Chr1g0193891 47.619 63 31 2 8 69 7 68 2.34e-12 63.5
Msa1313710 MtrunA17_Chr1g0193871 47.619 63 31 2 8 69 7 68 2.34e-12 63.5
Msa1313710 MtrunA17_Chr1g0193881 47.619 63 31 2 8 69 7 68 2.34e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1313710 AT3G13890.2 84.874 119 17 1 1 119 1 118 5.07e-67 219
Msa1313710 AT3G13890.1 78.906 128 17 2 1 119 1 127 8.95e-64 211
Msa1313710 AT3G12720.1 77.869 122 26 1 4 125 14 134 2.82e-63 208
Msa1313710 AT1G57560.1 72.581 124 33 1 1 124 1 123 5.01e-61 202
Msa1313710 AT1G57560.2 72.581 124 33 1 1 124 1 123 7.70e-61 201
Msa1313710 AT5G26660.1 72.800 125 33 1 1 125 1 124 9.49e-61 203
Msa1313710 AT4G01680.3 72.581 124 33 1 1 124 1 123 3.06e-60 198
Msa1313710 AT1G09540.1 73.387 124 32 1 1 124 1 123 1.21e-59 200
Msa1313710 AT4G01680.1 72.581 124 33 1 1 124 1 123 1.23e-59 199
Msa1313710 AT1G63910.1 72.650 117 31 1 1 117 1 116 3.04e-57 194
Msa1313710 AT4G01680.2 66.176 136 33 2 1 124 1 135 3.64e-56 191
Msa1313710 AT4G12350.1 57.343 143 54 2 1 143 1 136 2.28e-50 174
Msa1313710 AT2G16720.1 60.000 125 49 1 1 125 1 124 4.59e-50 172
Msa1313710 AT4G34990.1 60.000 125 49 1 1 125 1 124 6.47e-49 169
Msa1313710 AT4G21440.1 49.412 170 78 4 1 164 1 168 2.62e-48 170
Msa1313710 AT4G22680.1 61.290 124 47 1 1 124 1 123 2.62e-48 167
Msa1313710 AT4G38620.1 59.200 125 50 1 1 125 1 124 3.21e-48 167
Msa1313710 AT1G22640.1 59.677 124 49 1 1 124 1 123 8.20e-48 166
Msa1313710 AT5G12870.1 69.444 108 32 1 10 117 16 122 2.17e-47 166
Msa1313710 AT4G09460.1 58.871 124 50 1 1 124 1 123 2.87e-47 164
Msa1313710 AT3G08500.1 65.254 118 37 2 3 117 18 134 4.13e-47 167
Msa1313710 AT4G05100.1 58.400 125 50 2 1 124 1 124 3.02e-46 164
Msa1313710 AT3G02940.2 57.258 124 52 1 1 124 1 123 3.41e-46 163
Msa1313710 AT3G02940.1 57.258 124 52 1 1 124 1 123 6.16e-46 163
Msa1313710 AT3G02940.3 57.258 124 52 1 1 124 1 123 6.16e-46 163
Msa1313710 AT5G16600.1 60.484 124 48 1 1 124 1 123 9.47e-46 162
Msa1313710 AT3G01140.2 56.452 124 53 1 1 124 1 123 9.82e-46 163
Msa1313710 AT1G34670.1 58.065 124 51 1 1 124 1 123 1.14e-45 163
Msa1313710 AT1G66230.1 59.677 124 49 1 1 124 1 123 1.63e-45 160
Msa1313710 AT5G15310.4 50.685 146 65 2 1 140 1 145 2.03e-45 159
Msa1313710 AT5G65230.1 59.322 118 47 1 1 118 1 117 2.40e-45 161
Msa1313710 AT3G61250.1 57.258 124 52 1 1 124 1 123 2.72e-45 160
Msa1313710 AT5G54230.1 59.677 124 49 1 1 124 1 123 3.15e-45 161
Msa1313710 AT5G15310.1 50.685 146 65 2 1 140 1 145 4.29e-45 160
Msa1313710 AT5G15310.2 50.685 146 65 2 1 140 1 145 5.25e-45 160
Msa1313710 AT4G28110.1 56.452 124 53 1 1 124 1 123 5.99e-45 159
Msa1313710 AT3G01140.1 57.983 119 49 1 6 124 49 166 1.30e-44 161
Msa1313710 AT5G16770.4 45.263 190 94 5 1 188 1 182 3.05e-44 158
Msa1313710 AT5G16770.3 45.263 190 94 5 1 188 1 182 3.05e-44 158
Msa1313710 AT4G17785.2 57.600 125 51 2 1 124 1 124 3.66e-44 159
Msa1313710 AT4G17785.1 57.600 125 51 2 1 124 1 124 4.27e-44 159
Msa1313710 AT5G16770.1 45.263 190 94 5 1 188 1 182 6.22e-44 158
Msa1313710 AT5G16770.2 45.263 190 94 5 1 188 1 182 6.22e-44 158
Msa1313710 AT1G35515.1 55.645 124 54 1 1 124 1 123 1.06e-43 153
Msa1313710 AT1G79180.1 62.500 112 41 1 6 117 8 118 1.12e-43 156
Msa1313710 AT1G56160.1 62.500 112 41 1 6 117 8 118 1.68e-43 155
Msa1313710 AT5G23000.1 58.475 118 49 0 1 118 1 118 3.47e-43 155
Msa1313710 AT5G07690.1 54.032 124 56 1 1 124 1 123 4.28e-43 155
Msa1313710 AT5G10280.1 55.085 118 52 1 1 118 1 117 4.48e-43 155
Msa1313710 AT5G56110.1 56.923 130 54 2 1 129 1 129 4.98e-43 155
Msa1313710 AT2G31180.1 59.829 117 46 1 1 117 1 116 5.46e-43 153
Msa1313710 AT5G07700.1 54.839 124 55 1 1 124 1 123 5.69e-43 155
Msa1313710 AT5G07700.2 54.839 124 55 1 1 124 1 123 5.69e-43 155
Msa1313710 AT5G52260.1 63.636 110 39 1 9 118 9 117 6.10e-43 153
Msa1313710 AT5G62320.1 50.735 136 61 1 2 131 3 138 9.22e-43 152
Msa1313710 AT3G23250.1 56.410 117 50 1 1 117 1 116 1.22e-42 153
Msa1313710 AT1G16490.1 60.870 115 44 1 6 120 8 121 1.59e-42 152
Msa1313710 AT5G49330.1 58.974 117 47 1 1 117 1 116 3.86e-42 153
Msa1313710 AT5G61420.2 52.419 124 58 1 1 124 1 123 6.36e-42 153
Msa1313710 AT5G60890.1 53.279 122 56 1 1 122 1 121 7.84e-42 151
Msa1313710 AT3G48920.1 60.185 108 42 1 8 115 14 120 7.97e-42 150
Msa1313710 AT1G06180.1 58.120 117 48 1 1 117 1 116 9.10e-42 149
Msa1313710 AT3G13540.1 56.303 119 51 1 6 124 17 134 1.28e-41 149
Msa1313710 AT4G25560.1 63.303 109 39 1 10 118 8 115 1.73e-41 150
Msa1313710 AT5G14340.1 58.974 117 47 1 1 117 13 128 3.41e-41 149
Msa1313710 AT2G47460.1 58.120 117 48 1 1 117 1 116 3.53e-41 151
Msa1313710 AT1G18570.1 52.000 125 58 2 1 124 1 124 9.38e-41 150
Msa1313710 AT3G12820.1 58.772 114 46 1 6 119 8 120 1.41e-40 146
Msa1313710 AT5G57620.1 53.782 119 55 0 1 119 1 119 1.50e-40 149
Msa1313710 AT3G28470.1 51.007 149 64 2 1 141 1 148 3.85e-40 147
Msa1313710 AT1G74080.1 52.419 124 58 1 1 124 1 123 4.92e-39 144
Msa1313710 AT3G49690.1 52.542 118 56 0 1 118 1 118 5.93e-39 144
Msa1313710 AT3G27810.1 53.390 118 54 1 8 125 16 132 6.69e-39 141
Msa1313710 AT3G62610.1 54.701 117 52 1 1 117 1 116 6.88e-39 144
Msa1313710 AT5G65790.1 53.390 118 55 0 1 118 1 118 1.04e-38 145
Msa1313710 AT5G35550.1 59.633 109 43 1 9 117 11 118 1.92e-38 141
Msa1313710 AT2G36890.1 52.101 119 57 0 1 119 1 119 2.20e-38 142
Msa1313710 AT2G36890.2 52.101 119 57 0 1 119 42 160 3.09e-38 142
Msa1313710 AT4G37780.1 52.101 119 57 0 1 119 1 119 5.21e-38 141
Msa1313710 AT3G01530.1 57.547 106 44 1 12 117 25 129 1.62e-37 137
Msa1313710 AT5G14750.1 55.769 104 45 1 14 117 18 120 2.05e-37 136
Msa1313710 AT5G40350.1 56.481 108 46 1 11 118 16 122 3.49e-37 136
Msa1313710 AT1G79180.2 48.276 145 41 2 6 117 8 151 4.22e-37 139
Msa1313710 AT5G52600.1 51.938 129 56 2 8 131 8 135 5.95e-37 135
Msa1313710 AT1G74430.1 50.806 124 60 1 1 124 1 123 1.21e-36 136
Msa1313710 AT5G40330.1 55.238 105 46 1 13 117 13 116 1.52e-36 134
Msa1313710 AT3G27920.1 50.450 111 54 1 10 120 12 121 7.91e-36 133
Msa1313710 AT1G74650.1 52.542 118 55 1 1 118 1 117 8.03e-36 136
Msa1313710 AT1G48000.1 53.509 114 50 2 11 122 31 143 8.12e-36 133
Msa1313710 AT1G18710.1 53.097 113 52 1 12 124 12 123 9.14e-36 134
Msa1313710 AT3G47600.1 52.137 117 55 1 1 117 1 116 1.18e-35 135
Msa1313710 AT5G26660.2 73.750 80 21 0 46 125 14 93 3.54e-35 134
Msa1313710 AT5G62470.2 52.137 117 55 1 1 117 1 116 6.17e-35 134
Msa1313710 AT1G08810.1 50.413 121 59 1 1 121 1 120 7.59e-35 132
Msa1313710 AT3G11440.2 40.805 174 89 5 5 174 31 194 1.93e-34 135
Msa1313710 AT4G13480.1 55.556 108 47 1 9 116 3 109 3.17e-34 129
Msa1313710 AT3G28910.1 51.282 117 56 1 1 117 1 116 4.09e-34 131
Msa1313710 AT3G11440.3 40.805 174 89 5 5 174 31 194 5.85e-34 135
Msa1313710 AT3G11440.4 40.805 174 89 5 5 174 31 194 5.85e-34 135
Msa1313710 AT3G11440.1 40.805 174 89 5 5 174 31 194 5.85e-34 135
Msa1313710 AT3G24310.1 54.054 111 50 1 9 119 15 124 1.95e-33 127
Msa1313710 AT3G30210.1 53.922 102 46 1 14 115 29 129 2.19e-33 127
Msa1313710 AT5G06100.1 54.286 105 47 1 12 116 32 135 2.57e-33 131
Msa1313710 AT1G68320.1 48.361 122 62 1 10 131 17 137 2.68e-33 128
Msa1313710 AT2G47190.1 48.571 105 53 1 12 116 20 123 2.68e-33 127
Msa1313710 AT5G62470.1 52.137 117 54 2 1 117 1 115 3.51e-33 129
Msa1313710 AT2G26960.1 51.402 107 51 1 9 115 17 122 3.62e-33 130
Msa1313710 AT5G06100.5 54.286 105 47 1 12 116 32 135 8.16e-33 131
Msa1313710 AT5G06100.2 54.286 105 47 1 12 116 32 135 8.16e-33 131
Msa1313710 AT5G06100.3 54.286 105 47 1 12 116 32 135 8.16e-33 131
Msa1313710 AT5G06100.4 54.286 105 47 1 12 116 32 135 8.16e-33 131
Msa1313710 AT4G26930.1 49.580 119 57 2 12 130 19 134 1.96e-32 128
Msa1313710 AT1G66370.1 51.376 109 52 1 8 116 4 111 5.17e-32 123
Msa1313710 AT3G53200.1 51.852 108 51 1 9 116 6 112 9.72e-32 122
Msa1313710 AT5G55020.1 50.000 120 51 3 12 124 26 143 1.07e-31 128
Msa1313710 AT1G66380.1 54.128 109 49 1 8 116 4 111 4.80e-31 117
Msa1313710 AT2G32460.2 49.524 105 52 1 12 116 6 109 6.34e-31 125
Msa1313710 AT2G32460.1 46.429 112 59 1 5 116 11 121 6.68e-31 125
Msa1313710 AT5G59780.3 49.074 108 54 1 9 116 5 111 8.48e-31 119
Msa1313710 AT3G06490.1 56.731 104 44 1 12 115 19 121 1.21e-30 121
Msa1313710 AT1G25340.1 50.485 103 50 1 14 116 20 121 4.68e-30 119
Msa1313710 AT3G46130.1 48.148 108 55 1 9 116 6 112 7.95e-30 117
Msa1313710 AT2G26950.1 46.364 110 58 1 2 111 6 114 1.13e-29 120
Msa1313710 AT3G27810.2 58.750 80 33 0 46 125 4 83 2.10e-29 114
Msa1313710 AT3G60460.1 52.830 106 48 2 7 111 6 110 4.56e-29 116
Msa1313710 AT5G49620.1 54.808 104 46 1 12 115 26 128 6.40e-29 116
Msa1313710 AT1G56650.1 54.128 109 49 1 8 116 4 111 1.76e-28 113
Msa1313710 AT5G40350.2 63.014 73 27 0 46 118 5 77 3.13e-28 110
Msa1313710 AT1G66390.1 53.211 109 50 1 8 116 4 111 7.34e-28 112
Msa1313710 AT5G14750.3 63.014 73 27 0 49 121 18 90 8.71e-28 109
Msa1313710 AT5G35550.2 64.865 74 26 0 44 117 48 121 3.63e-27 110
Msa1313710 AT5G40360.1 34.031 191 114 6 9 198 153 332 1.92e-26 110
Msa1313710 AT3G12820.2 61.972 71 27 0 49 119 2 72 1.32e-25 103
Msa1313710 AT5G49620.2 48.305 118 46 2 12 115 26 142 1.53e-25 107
Msa1313710 AT1G25340.2 47.573 103 48 2 14 116 20 116 2.68e-25 105
Msa1313710 AT1G25340.3 47.573 103 48 2 14 116 20 116 4.89e-25 105
Msa1313710 AT3G47600.2 50.000 94 42 1 24 117 22 110 1.87e-24 104
Msa1313710 AT3G46130.3 58.333 72 30 0 45 116 9 80 3.64e-24 100
Msa1313710 AT5G59780.2 59.155 71 29 0 46 116 20 90 8.73e-24 99.8
Msa1313710 AT1G69560.1 43.220 118 63 2 2 117 93 208 9.70e-24 102
Msa1313710 AT3G46130.4 59.155 71 29 0 46 116 20 90 1.25e-23 99.8
Msa1313710 AT1G69560.2 43.220 118 63 2 2 117 109 224 1.29e-23 102
Msa1313710 AT3G53200.2 59.155 71 29 0 46 116 9 79 1.31e-23 99.0
Msa1313710 AT1G66380.3 59.740 77 31 0 40 116 2 78 1.45e-23 95.5
Msa1313710 AT3G27785.1 44.340 106 55 3 8 112 183 285 1.46e-23 103
Msa1313710 AT4G18770.1 44.144 111 58 3 8 117 211 318 1.85e-23 102
Msa1313710 AT5G58850.1 44.231 104 54 3 14 116 105 205 4.23e-23 102
Msa1313710 AT3G09370.2 32.407 216 128 6 14 220 135 341 4.38e-23 102
Msa1313710 AT3G09370.1 32.407 216 128 6 14 220 130 336 5.67e-23 102
Msa1313710 AT5G11050.1 47.000 100 49 3 14 112 105 201 5.81e-23 101
Msa1313710 AT3G09370.3 32.407 216 128 6 14 220 143 349 1.09e-22 101
Msa1313710 AT5G02320.1 45.714 105 53 3 14 117 127 228 1.52e-22 101
Msa1313710 AT5G02320.2 45.714 105 53 3 14 117 127 228 1.52e-22 101
Msa1313710 AT5G02320.3 45.714 105 53 3 14 117 67 168 1.58e-22 100
Msa1313710 AT1G17950.1 46.667 105 50 4 14 116 5 105 6.71e-22 95.1
Msa1313710 AT5G11510.2 36.054 147 87 4 14 156 81 224 7.90e-22 99.8
Msa1313710 AT5G11510.3 36.054 147 87 4 14 156 81 224 8.21e-22 99.8
Msa1313710 AT5G11510.1 36.054 147 87 4 14 156 81 224 8.21e-22 99.8
Msa1313710 AT5G11510.4 36.054 147 87 4 14 156 81 224 8.21e-22 99.8
Msa1313710 AT5G11510.5 36.054 147 87 4 14 156 81 224 8.73e-22 99.4
Msa1313710 AT1G26780.1 43.810 105 57 1 12 116 96 198 9.26e-22 95.5
Msa1313710 AT1G22640.3 63.636 66 24 0 59 124 1 66 1.08e-21 93.2
Msa1313710 AT1G26780.2 43.810 105 57 1 12 116 96 198 1.10e-21 96.7
Msa1313710 AT1G73410.1 47.170 106 50 4 13 116 5 106 6.20e-21 92.4
Msa1313710 AT1G18960.1 43.363 113 57 3 5 117 4 109 7.43e-21 93.6
Msa1313710 AT2G39880.1 47.273 110 53 4 8 116 45 150 8.08e-21 94.4
Msa1313710 AT5G67300.1 47.115 104 51 3 14 116 6 106 1.35e-20 92.8
Msa1313710 AT1G73410.2 47.170 106 50 4 13 116 5 106 1.45e-20 90.1
Msa1313710 AT3G55730.1 49.038 104 49 3 14 116 56 156 1.48e-20 94.0
Msa1313710 AT4G32730.5 43.810 105 55 3 14 117 87 188 3.14e-20 94.7
Msa1313710 AT4G32730.4 43.810 105 55 3 14 117 87 188 3.14e-20 94.7
Msa1313710 AT4G32730.3 43.810 105 55 3 14 117 87 188 3.14e-20 94.7
Msa1313710 AT4G32730.2 43.810 105 55 3 14 117 87 188 3.14e-20 94.7
Msa1313710 AT4G32730.1 43.925 107 56 3 14 119 87 190 3.23e-20 94.7
Msa1313710 AT2G25230.1 44.231 104 51 4 10 112 25 122 3.94e-20 89.7
Msa1313710 AT3G50060.1 35.758 165 84 5 14 173 6 153 1.02e-19 90.1
Msa1313710 AT3G09230.1 46.226 106 53 3 14 118 55 157 1.26e-19 91.3
Msa1313710 AT5G14750.4 59.322 59 24 0 59 117 1 59 3.07e-19 84.7
Msa1313710 AT5G14750.2 59.322 59 24 0 59 117 1 59 3.07e-19 84.7
Msa1313710 AT4G37260.1 45.192 104 53 3 14 116 13 113 6.81e-19 87.8
Msa1313710 AT3G23250.2 59.322 59 24 0 59 117 1 59 2.35e-18 84.3
Msa1313710 AT2G23290.1 45.192 104 53 3 14 116 13 113 5.83e-18 85.1
Msa1313710 AT1G66380.2 51.807 83 39 1 8 90 4 85 6.35e-18 79.7
Msa1313710 AT3G29020.2 39.623 106 60 3 13 117 66 168 6.80e-18 84.7
Msa1313710 AT3G29020.1 39.623 106 60 3 13 117 64 166 7.41e-18 83.2
Msa1313710 AT4G33450.1 45.000 100 51 3 9 107 14 110 7.43e-18 83.6
Msa1313710 AT4G00540.2 41.284 109 59 3 12 117 101 207 1.36e-17 85.1
Msa1313710 AT1G71030.2 50.000 74 37 0 52 125 5 78 1.47e-17 80.9
Msa1313710 AT5G17800.1 37.069 116 71 2 1 116 80 193 1.72e-17 84.0
Msa1313710 AT1G71030.1 50.000 74 37 0 52 125 19 92 1.94e-17 80.9
Msa1313710 AT4G00540.1 41.284 109 59 3 12 117 99 205 2.55e-17 84.7
Msa1313710 AT2G02820.1 42.105 114 63 3 4 116 19 130 3.16e-17 84.3
Msa1313710 AT2G02820.3 43.000 100 55 2 17 116 33 130 3.47e-17 83.2
Msa1313710 AT2G02820.2 42.105 114 63 3 4 116 19 130 3.95e-17 84.3
Msa1313710 AT5G40430.1 37.383 107 62 3 7 112 47 149 7.60e-17 80.9
Msa1313710 AT1G14350.2 42.000 100 56 2 17 116 28 125 1.47e-15 79.3
Msa1313710 AT1G14350.1 42.000 100 56 2 17 116 28 125 1.47e-15 79.3
Msa1313710 AT2G37630.1 40.816 98 55 2 14 109 4 100 2.56e-14 74.7
Msa1313710 AT1G14350.3 50.000 60 30 0 57 116 23 82 1.73e-11 66.2
Msa1313710 AT1G14350.4 50.000 60 30 0 57 116 23 82 1.73e-11 66.2
Msa1313710 AT5G39700.1 33.607 122 76 3 4 122 46 165 2.13e-11 63.5
Msa1313710 AT4G25560.2 57.447 47 20 0 72 118 3 49 8.55e-11 62.4

Find 95 sgRNAs with CRISPR-Local

Find 326 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTCAATGTCAAGGAAAT+TGG 0.105747 8_4:+11785356 None:intergenic
AGTACTATTTCAGGTATAAT+TGG 0.212756 8_4:+11785771 None:intergenic
ACATTAGGGTTTGCATTTAA+AGG 0.217309 8_4:+11785933 None:intergenic
TGTCTACGTTTGTATCAATT+TGG 0.229657 8_4:+11785400 None:intergenic
TGGTGAAAACATTGCATATT+TGG 0.239301 8_4:+11785855 None:intergenic
CTTTGATAATTGACTAATTT+AGG 0.240485 8_4:+11785558 None:intergenic
ATCAAATACATCACAACTTA+TGG 0.251425 8_4:-11787100 Msa1313710:CDS
TTAGATGGTAGTACTATTTC+AGG 0.269039 8_4:+11785762 None:intergenic
GACTAATTGAGGCACAATAT+TGG 0.273377 8_4:+11785149 None:intergenic
ATAGAACTCCACCGCATTCT+AGG 0.277206 8_4:-11786788 Msa1313710:CDS
GATGATGATGATTGGAGTTT+AGG 0.296975 8_4:+11785475 None:intergenic
TTGAAGTTTAGCATCACATT+AGG 0.305458 8_4:+11785918 None:intergenic
TTATCCACAAGATCAAAATA+TGG 0.309059 8_4:-11785046 Msa1313710:CDS
ACTAATTGAGGCACAATATT+GGG 0.311757 8_4:+11785150 None:intergenic
ACCTCATTACCCGTTCTTCC+TGG 0.330087 8_4:+11786077 None:intergenic
AAACTTCCACGTTTCAAATC+AGG 0.335974 8_4:+11786836 None:intergenic
GGCACCACTCCATTTAATAT+TGG 0.337426 8_4:-11785651 Msa1313710:CDS
GGGAGGCGAATATCATAAAA+TGG 0.346205 8_4:+11785987 None:intergenic
CAAGGAAATTGGGATTATAA+TGG 0.353329 8_4:+11785367 None:intergenic
GATGTGTCACCAATATTAAA+TGG 0.364065 8_4:+11785642 None:intergenic
ACAAACCCTAGTATTCCTTT+AGG 0.376576 8_4:-11784943 Msa1313710:CDS
TTCTCAATGTCAAGGAAATT+GGG 0.377090 8_4:+11785357 None:intergenic
TGATCACAATCCAAATCAAT+TGG 0.394468 8_4:-11785694 Msa1313710:CDS
TTGTATTGTAATTAACTGTT+TGG 0.397259 8_4:+11784962 None:intergenic
TGTTGTGCCATTGATGCAAT+TGG 0.397345 8_4:+11785213 None:intergenic
AATGACCATGTATCTTCATC+AGG 0.398481 8_4:+11785312 None:intergenic
CCTTGGAATCAAATGAATCT+AGG 0.399640 8_4:+11785091 None:intergenic
TCACAAGAGGAAGGATTAGA+TGG 0.401191 8_4:+11785747 None:intergenic
CATCAATGTAATTATCCAAT+TGG 0.405881 8_4:+11785016 None:intergenic
GAGACGAGTTTGAAAGGTAT+AGG 0.406775 8_4:+11785877 None:intergenic
TTGTGAAAATACATGGTCAT+TGG 0.411595 8_4:-11785730 Msa1313710:CDS
TGAAGTTTAGCATCACATTA+GGG 0.421919 8_4:+11785919 None:intergenic
CTTTGATCATTGACTAATTG+AGG 0.425630 8_4:+11785138 None:intergenic
AAATATGGAAACTAACCAAT+TGG 0.425983 8_4:-11785031 Msa1313710:CDS
AGTCAACCCAATTGCATCAA+TGG 0.426518 8_4:-11785220 Msa1313710:CDS
ACTAAGAGCTTCATGTTCCT+TGG 0.426868 8_4:+11785074 None:intergenic
GTTTAGGATCACATGTTCCT+TGG 0.427075 8_4:+11785491 None:intergenic
TCCCATCCTAAAGGAATACT+AGG 0.429991 8_4:+11784937 None:intergenic
CCTAGATTCATTTGATTCCA+AGG 0.455369 8_4:-11785091 Msa1313710:CDS
TCATCAGGGAAAGGATTAGA+TGG 0.457767 8_4:+11785327 None:intergenic
AGTTCTGTTCCAAAACTTGC+TGG 0.464625 8_4:-11787061 Msa1313710:intron
CTGATCTTGATGATGATGAT+TGG 0.467876 8_4:+11785467 None:intergenic
CGTTCTTCCTGGCAAGTGCT+TGG 0.469448 8_4:+11786088 None:intergenic
ACTGCTGCATTAATGAACTT+TGG 0.470384 8_4:+11785613 None:intergenic
ACCCTAGTATTCCTTTAGGA+TGG 0.470539 8_4:-11784939 Msa1313710:CDS
AAGCACTTGCCAGGAAGAAC+GGG 0.472251 8_4:-11786086 Msa1313710:CDS
GGAGGCGAATATCATAAAAT+GGG 0.472835 8_4:+11785988 None:intergenic
CAAATTGCCAAGCACTTGCC+AGG 0.478813 8_4:-11786095 Msa1313710:CDS
TCAATAATCATTTCAATGCC+AGG 0.480419 8_4:-11785812 Msa1313710:CDS
GTTGTGCCATTGATGCAATT+GGG 0.484555 8_4:+11785214 None:intergenic
ATAATTACATTGATGCCCTC+AGG 0.490476 8_4:-11785008 Msa1313710:CDS
CCCTAGTATTCCTTTAGGAT+GGG 0.495653 8_4:-11784938 Msa1313710:CDS
AACTATGGCTCCCATCCTAA+AGG 0.501906 8_4:+11784928 None:intergenic
CTTCCTCTTGTGAAAATACA+TGG 0.503376 8_4:-11785737 Msa1313710:CDS
GAAAGAGTTGCAGATTAAGA+TGG 0.506273 8_4:-11786874 Msa1313710:CDS
ACTGTTTGGCTGCTTGATGA+TGG 0.506778 8_4:+11784976 None:intergenic
TTTGAGATGAGGTTGGAAGG+TGG 0.509462 8_4:+11785442 None:intergenic
AATCTAGGATGCAACAATCA+TGG 0.523526 8_4:+11785106 None:intergenic
CTTATGGACATGATTGCTGC+TGG 0.523991 8_4:-11787084 Msa1313710:CDS
AGAAGGTCAACAGAGGACTA+TGG 0.528903 8_4:-11787147 Msa1313710:CDS
CGATTATTCATCTGATTCCA+AGG 0.530355 8_4:-11785508 Msa1313710:CDS
TGTCTACCACTGTACCAGTT+TGG 0.535360 8_4:+11785835 None:intergenic
AAAGGTATAGGTGATCTTGA+TGG 0.536116 8_4:+11785889 None:intergenic
CAAGCACTTGCCAGGAAGAA+CGG 0.539089 8_4:-11786087 Msa1313710:CDS
TCATAAAATGGGGTGAAGGA+TGG 0.540027 8_4:+11785999 None:intergenic
CTTTCCCTGATGAAGATACA+TGG 0.545218 8_4:-11785317 Msa1313710:CDS
CTAAGACCTGATTTGAAACG+TGG 0.553388 8_4:-11786842 Msa1313710:CDS
TATTTGGAGACGAGTTTGAA+AGG 0.553706 8_4:+11785871 None:intergenic
TGCAACAATCATGGTCCTCA+AGG 0.560058 8_4:+11785115 None:intergenic
ATGGAACAATATCATCAGAA+AGG 0.564185 8_4:+11786018 None:intergenic
TCCACCGCATTCTAGGCAAT+AGG 0.565568 8_4:-11786781 Msa1313710:intron
GCCAGGAAGAACGGGTAATG+AGG 0.568173 8_4:-11786078 Msa1313710:CDS
ACCTCATCTCAAAATCTACA+AGG 0.569833 8_4:-11785432 Msa1313710:CDS
GTATTTGATTCTCAATGTCA+AGG 0.576272 8_4:+11785349 None:intergenic
TACATGGTCATTAGATTGTG+TGG 0.578377 8_4:-11785301 Msa1313710:CDS
CATGTATCTTCATCAGGGAA+AGG 0.587035 8_4:+11785318 None:intergenic
ATTGACTAATTTAGGCACAA+TGG 0.588637 8_4:+11785566 None:intergenic
AATATCATAAAATGGGGTGA+AGG 0.593772 8_4:+11785995 None:intergenic
TATAGGTGATCTTGATGGTG+AGG 0.593802 8_4:+11785894 None:intergenic
TGCTACATGCATAATCCTCA+AGG 0.602722 8_4:+11785535 None:intergenic
CTCTTGCTGTAGCAAAGAGA+AGG 0.605264 8_4:-11787164 Msa1313710:CDS
ATGACCATGTATCTTCATCA+GGG 0.622631 8_4:+11785313 None:intergenic
TGTGTAGGTCTGCAGAGATG+TGG 0.626648 8_4:-11786896 Msa1313710:intron
AGTCAATTATCAAAGCCTTG+AGG 0.626698 8_4:-11785550 Msa1313710:CDS
ACCTATTGCCTAGAATGCGG+TGG 0.629249 8_4:+11786780 None:intergenic
CCCATCCTAAAGGAATACTA+GGG 0.646201 8_4:+11784938 None:intergenic
GTCACCAATATTAAATGGAG+TGG 0.646540 8_4:+11785647 None:intergenic
AGTCAATGATCAAAGCCTTG+AGG 0.663412 8_4:-11785130 Msa1313710:CDS
TCAATGTCATGATCATCACT+TGG 0.687505 8_4:-11785184 Msa1313710:CDS
TGGAATCAGATGAATAATCG+AGG 0.688424 8_4:+11785511 None:intergenic
AGCAAAGAGAAGGTCAACAG+AGG 0.693727 8_4:-11787154 Msa1313710:CDS
TATACCTATTGCCTAGAATG+CGG 0.693771 8_4:+11786777 None:intergenic
ATGATGGCAATGAAAACCTG+AGG 0.700721 8_4:+11784992 None:intergenic
GAGGCGAATATCATAAAATG+GGG 0.714105 8_4:+11785989 None:intergenic
TGATGGCAATGAAAACCTGA+GGG 0.740418 8_4:+11784993 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATTAGTATATATAG+TGG + chr8_4:11785089-11785108 None:intergenic 10.0%
!!! AAAAAAGAAAGTATTTATTT+AGG + chr8_4:11785870-11785889 None:intergenic 10.0%
!!! AATAAATACTTTCTTTTTTT+TGG - chr8_4:11785871-11785890 Msa1313710:CDS 10.0%
!! AAAAAAATTAGTATATATAG+TGG + chr8_4:11785089-11785108 None:intergenic 10.0%
!!! AAAAAAGAAAGTATTTATTT+AGG + chr8_4:11785870-11785889 None:intergenic 10.0%
!!! AATAAATACTTTCTTTTTTT+TGG - chr8_4:11785871-11785890 Msa1313710:CDS 10.0%
!! AATAAGGAAAAAAAAAAGTA+TGG + chr8_4:11785161-11785180 None:intergenic 15.0%
!! AATAAGGAAAAAAAAAAGTA+TGG + chr8_4:11785161-11785180 None:intergenic 15.0%
!! AACAGATGAACAATATAATA+AGG + chr8_4:11785177-11785196 None:intergenic 20.0%
!! ATTGACATGAAAATAAACAT+TGG + chr8_4:11785385-11785404 None:intergenic 20.0%
!!! TGAACTTTGAGAATAATAAA+TGG + chr8_4:11785413-11785432 None:intergenic 20.0%
!! TATTATTCTCAAAGTTCAAA+AGG - chr8_4:11785415-11785434 Msa1313710:CDS 20.0%
!! CAAAATATACAAAGAAGTTT+AGG + chr8_4:11785644-11785663 None:intergenic 20.0%
!!! CTAAACTTCTTTGTATATTT+TGG - chr8_4:11785642-11785661 Msa1313710:CDS 20.0%
!! TTACACATATTAAAGATTAG+AGG + chr8_4:11785713-11785732 None:intergenic 20.0%
!!! TTAGAATGACACTTATTTTA+AGG - chr8_4:11785739-11785758 Msa1313710:CDS 20.0%
!!! TAGAATGACACTTATTTTAA+GGG - chr8_4:11785740-11785759 Msa1313710:CDS 20.0%
!!! CAATGCAAAAATTTTATCTT+GGG + chr8_4:11785803-11785822 None:intergenic 20.0%
!!! CAATCTTTTGAGAAATAAAT+TGG + chr8_4:11785835-11785854 None:intergenic 20.0%
!!! ATTTGATTTTCCAATTGATT+TGG + chr8_4:11786424-11786443 None:intergenic 20.0%
!! GAAAATCAAATTTCAAAAAG+TGG - chr8_4:11786433-11786452 Msa1313710:intron 20.0%
!!! CTTTGATAATTGACTAATTT+AGG + chr8_4:11786550-11786569 None:intergenic 20.0%
!! TTGTATTGTAATTAACTGTT+TGG + chr8_4:11787146-11787165 None:intergenic 20.0%
!! AACAGATGAACAATATAATA+AGG + chr8_4:11785177-11785196 None:intergenic 20.0%
!! ATTGACATGAAAATAAACAT+TGG + chr8_4:11785385-11785404 None:intergenic 20.0%
!!! TGAACTTTGAGAATAATAAA+TGG + chr8_4:11785413-11785432 None:intergenic 20.0%
!! TATTATTCTCAAAGTTCAAA+AGG - chr8_4:11785415-11785434 Msa1313710:CDS 20.0%
!! CAAAATATACAAAGAAGTTT+AGG + chr8_4:11785644-11785663 None:intergenic 20.0%
!!! CTAAACTTCTTTGTATATTT+TGG - chr8_4:11785642-11785661 Msa1313710:CDS 20.0%
!! TTACACATATTAAAGATTAG+AGG + chr8_4:11785713-11785732 None:intergenic 20.0%
!!! TTAGAATGACACTTATTTTA+AGG - chr8_4:11785739-11785758 Msa1313710:CDS 20.0%
!!! TAGAATGACACTTATTTTAA+GGG - chr8_4:11785740-11785759 Msa1313710:CDS 20.0%
!!! CAATGCAAAAATTTTATCTT+GGG + chr8_4:11785803-11785822 None:intergenic 20.0%
!!! CAATCTTTTGAGAAATAAAT+TGG + chr8_4:11785835-11785854 None:intergenic 20.0%
!!! ATTTGATTTTCCAATTGATT+TGG + chr8_4:11786424-11786443 None:intergenic 20.0%
!! GAAAATCAAATTTCAAAAAG+TGG - chr8_4:11786433-11786452 Msa1313710:intron 20.0%
!!! CTTTGATAATTGACTAATTT+AGG + chr8_4:11786550-11786569 None:intergenic 20.0%
!! TTGTATTGTAATTAACTGTT+TGG + chr8_4:11787146-11787165 None:intergenic 20.0%
! ATCAAATACATCACAACTTA+TGG - chr8_4:11785005-11785024 Msa1313710:CDS 25.0%
!! AGGAAAAAAAAAAGTATGGA+CGG + chr8_4:11785157-11785176 None:intergenic 25.0%
! GAAAAAGAGCTATATTGTAA+TGG + chr8_4:11785355-11785374 None:intergenic 25.0%
! TCACAAAAGTTGTCAAAAAA+TGG + chr8_4:11785551-11785570 None:intergenic 25.0%
!! ATTTGAACAATCCTTTTGTT+TGG + chr8_4:11785684-11785703 None:intergenic 25.0%
!!! AAATGTTAATTTGTGCCTTA+GGG - chr8_4:11785763-11785782 Msa1313710:CDS 25.0%
!! CCAATGCAAAAATTTTATCT+TGG + chr8_4:11785804-11785823 None:intergenic 25.0%
!! CCAAGATAAAATTTTTGCAT+TGG - chr8_4:11785801-11785820 Msa1313710:CDS 25.0%
!!! CACTTTCCGTTTTAAAATAA+GGG + chr8_4:11785936-11785955 None:intergenic 25.0%
!!! ACACTTTCCGTTTTAAAATA+AGG + chr8_4:11785937-11785956 None:intergenic 25.0%
!!! GGTATAATTGGATTTTGATT+GGG + chr8_4:11786325-11786344 None:intergenic 25.0%
!!! AGGTATAATTGGATTTTGAT+TGG + chr8_4:11786326-11786345 None:intergenic 25.0%
!! AGTACTATTTCAGGTATAAT+TGG + chr8_4:11786337-11786356 None:intergenic 25.0%
! TTATCCACAAGATCAAAATA+TGG - chr8_4:11787059-11787078 Msa1313710:intron 25.0%
! AAATATGGAAACTAACCAAT+TGG - chr8_4:11787074-11787093 Msa1313710:CDS 25.0%
! CATCAATGTAATTATCCAAT+TGG + chr8_4:11787092-11787111 None:intergenic 25.0%
! ATCAAATACATCACAACTTA+TGG - chr8_4:11785005-11785024 Msa1313710:CDS 25.0%
!! AGGAAAAAAAAAAGTATGGA+CGG + chr8_4:11785157-11785176 None:intergenic 25.0%
! GAAAAAGAGCTATATTGTAA+TGG + chr8_4:11785355-11785374 None:intergenic 25.0%
! TCACAAAAGTTGTCAAAAAA+TGG + chr8_4:11785551-11785570 None:intergenic 25.0%
!! ATTTGAACAATCCTTTTGTT+TGG + chr8_4:11785684-11785703 None:intergenic 25.0%
!!! AAATGTTAATTTGTGCCTTA+GGG - chr8_4:11785763-11785782 Msa1313710:CDS 25.0%
!! CCAATGCAAAAATTTTATCT+TGG + chr8_4:11785804-11785823 None:intergenic 25.0%
!! CCAAGATAAAATTTTTGCAT+TGG - chr8_4:11785801-11785820 Msa1313710:CDS 25.0%
!!! CACTTTCCGTTTTAAAATAA+GGG + chr8_4:11785936-11785955 None:intergenic 25.0%
!!! ACACTTTCCGTTTTAAAATA+AGG + chr8_4:11785937-11785956 None:intergenic 25.0%
!!! GGTATAATTGGATTTTGATT+GGG + chr8_4:11786325-11786344 None:intergenic 25.0%
!!! AGGTATAATTGGATTTTGAT+TGG + chr8_4:11786326-11786345 None:intergenic 25.0%
!! AGTACTATTTCAGGTATAAT+TGG + chr8_4:11786337-11786356 None:intergenic 25.0%
! TTATCCACAAGATCAAAATA+TGG - chr8_4:11787059-11787078 Msa1313710:intron 25.0%
! AAATATGGAAACTAACCAAT+TGG - chr8_4:11787074-11787093 Msa1313710:CDS 25.0%
! CATCAATGTAATTATCCAAT+TGG + chr8_4:11787092-11787111 None:intergenic 25.0%
! ATGAGTTTTTCATCTTCTTC+AGG + chr8_4:11784987-11785006 None:intergenic 30.0%
GTTTATATCATGATGTGTGT+AGG - chr8_4:11785194-11785213 Msa1313710:CDS 30.0%
! AAGGTTGATTATACTCTTTC+CGG - chr8_4:11785434-11785453 Msa1313710:CDS 30.0%
!!! AAGTGTCTCTCTTTTTCAAT+TGG - chr8_4:11785465-11785484 Msa1313710:CDS 30.0%
CAAAAAGTTGTCCAAACAAA+AGG - chr8_4:11785670-11785689 Msa1313710:CDS 30.0%
!! GAAATGTTAATTTGTGCCTT+AGG - chr8_4:11785762-11785781 Msa1313710:CDS 30.0%
GTATATTAATATGTGCCCTA+AGG + chr8_4:11785781-11785800 None:intergenic 30.0%
!!! GCATGACCCTTATTTTAAAA+CGG - chr8_4:11785927-11785946 Msa1313710:CDS 30.0%
ACAAGTTTAAACCTTGTCAA+GGG + chr8_4:11785975-11785994 None:intergenic 30.0%
AACAAGTTTAAACCTTGTCA+AGG + chr8_4:11785976-11785995 None:intergenic 30.0%
! TGACAAGGTTTAAACTTGTT+TGG - chr8_4:11785976-11785995 Msa1313710:CDS 30.0%
! TTTAAACTTGTTTGGACAGA+TGG - chr8_4:11785984-11786003 Msa1313710:CDS 30.0%
! GTAATGAGGTGAAAAACTTT+TGG - chr8_4:11786041-11786060 Msa1313710:CDS 30.0%
ATGGAACAATATCATCAGAA+AGG + chr8_4:11786090-11786109 None:intergenic 30.0%
AATATCATAAAATGGGGTGA+AGG + chr8_4:11786113-11786132 None:intergenic 30.0%
ACATTAGGGTTTGCATTTAA+AGG + chr8_4:11786175-11786194 None:intergenic 30.0%
TGAAGTTTAGCATCACATTA+GGG + chr8_4:11786189-11786208 None:intergenic 30.0%
TTGAAGTTTAGCATCACATT+AGG + chr8_4:11786190-11786209 None:intergenic 30.0%
TGGTGAAAACATTGCATATT+TGG + chr8_4:11786253-11786272 None:intergenic 30.0%
TCAATAATCATTTCAATGCC+AGG - chr8_4:11786293-11786312 Msa1313710:intron 30.0%
!!! TAATTGGATTTTGATTGGGT+AGG + chr8_4:11786321-11786340 None:intergenic 30.0%
TTAGATGGTAGTACTATTTC+AGG + chr8_4:11786346-11786365 None:intergenic 30.0%
TTGTGAAAATACATGGTCAT+TGG - chr8_4:11786375-11786394 Msa1313710:intron 30.0%
TGATCACAATCCAAATCAAT+TGG - chr8_4:11786411-11786430 Msa1313710:intron 30.0%
GATGTGTCACCAATATTAAA+TGG + chr8_4:11786466-11786485 None:intergenic 30.0%
ATTGACTAATTTAGGCACAA+TGG + chr8_4:11786542-11786561 None:intergenic 30.0%
TGTCTACGTTTGTATCAATT+TGG + chr8_4:11786708-11786727 None:intergenic 30.0%
CAAGGAAATTGGGATTATAA+TGG + chr8_4:11786741-11786760 None:intergenic 30.0%
TTCTCAATGTCAAGGAAATT+GGG + chr8_4:11786751-11786770 None:intergenic 30.0%
ATTCTCAATGTCAAGGAAAT+TGG + chr8_4:11786752-11786771 None:intergenic 30.0%
GTATTTGATTCTCAATGTCA+AGG + chr8_4:11786759-11786778 None:intergenic 30.0%
!! GTTGACTAAATTGTTTTGCT+GGG + chr8_4:11786872-11786891 None:intergenic 30.0%
ACTAATTGAGGCACAATATT+GGG + chr8_4:11786958-11786977 None:intergenic 30.0%
! CTTTGATCATTGACTAATTG+AGG + chr8_4:11786970-11786989 None:intergenic 30.0%
!!! GTTTCCATATTTTGATCTTG+TGG + chr8_4:11787066-11787085 None:intergenic 30.0%
! ATGAGTTTTTCATCTTCTTC+AGG + chr8_4:11784987-11785006 None:intergenic 30.0%
GTTTATATCATGATGTGTGT+AGG - chr8_4:11785194-11785213 Msa1313710:CDS 30.0%
! AAGGTTGATTATACTCTTTC+CGG - chr8_4:11785434-11785453 Msa1313710:CDS 30.0%
!!! AAGTGTCTCTCTTTTTCAAT+TGG - chr8_4:11785465-11785484 Msa1313710:CDS 30.0%
CAAAAAGTTGTCCAAACAAA+AGG - chr8_4:11785670-11785689 Msa1313710:CDS 30.0%
!! GAAATGTTAATTTGTGCCTT+AGG - chr8_4:11785762-11785781 Msa1313710:CDS 30.0%
GTATATTAATATGTGCCCTA+AGG + chr8_4:11785781-11785800 None:intergenic 30.0%
!!! GCATGACCCTTATTTTAAAA+CGG - chr8_4:11785927-11785946 Msa1313710:CDS 30.0%
ACAAGTTTAAACCTTGTCAA+GGG + chr8_4:11785975-11785994 None:intergenic 30.0%
AACAAGTTTAAACCTTGTCA+AGG + chr8_4:11785976-11785995 None:intergenic 30.0%
! TGACAAGGTTTAAACTTGTT+TGG - chr8_4:11785976-11785995 Msa1313710:CDS 30.0%
! TTTAAACTTGTTTGGACAGA+TGG - chr8_4:11785984-11786003 Msa1313710:CDS 30.0%
! GTAATGAGGTGAAAAACTTT+TGG - chr8_4:11786041-11786060 Msa1313710:CDS 30.0%
ATGGAACAATATCATCAGAA+AGG + chr8_4:11786090-11786109 None:intergenic 30.0%
AATATCATAAAATGGGGTGA+AGG + chr8_4:11786113-11786132 None:intergenic 30.0%
ACATTAGGGTTTGCATTTAA+AGG + chr8_4:11786175-11786194 None:intergenic 30.0%
TGAAGTTTAGCATCACATTA+GGG + chr8_4:11786189-11786208 None:intergenic 30.0%
TTGAAGTTTAGCATCACATT+AGG + chr8_4:11786190-11786209 None:intergenic 30.0%
TGGTGAAAACATTGCATATT+TGG + chr8_4:11786253-11786272 None:intergenic 30.0%
TCAATAATCATTTCAATGCC+AGG - chr8_4:11786293-11786312 Msa1313710:intron 30.0%
!!! TAATTGGATTTTGATTGGGT+AGG + chr8_4:11786321-11786340 None:intergenic 30.0%
TTAGATGGTAGTACTATTTC+AGG + chr8_4:11786346-11786365 None:intergenic 30.0%
TTGTGAAAATACATGGTCAT+TGG - chr8_4:11786375-11786394 Msa1313710:intron 30.0%
TGATCACAATCCAAATCAAT+TGG - chr8_4:11786411-11786430 Msa1313710:intron 30.0%
GATGTGTCACCAATATTAAA+TGG + chr8_4:11786466-11786485 None:intergenic 30.0%
ATTGACTAATTTAGGCACAA+TGG + chr8_4:11786542-11786561 None:intergenic 30.0%
TGTCTACGTTTGTATCAATT+TGG + chr8_4:11786708-11786727 None:intergenic 30.0%
CAAGGAAATTGGGATTATAA+TGG + chr8_4:11786741-11786760 None:intergenic 30.0%
TTCTCAATGTCAAGGAAATT+GGG + chr8_4:11786751-11786770 None:intergenic 30.0%
ATTCTCAATGTCAAGGAAAT+TGG + chr8_4:11786752-11786771 None:intergenic 30.0%
GTATTTGATTCTCAATGTCA+AGG + chr8_4:11786759-11786778 None:intergenic 30.0%
!! GTTGACTAAATTGTTTTGCT+GGG + chr8_4:11786872-11786891 None:intergenic 30.0%
ACTAATTGAGGCACAATATT+GGG + chr8_4:11786958-11786977 None:intergenic 30.0%
! CTTTGATCATTGACTAATTG+AGG + chr8_4:11786970-11786989 None:intergenic 30.0%
!!! GTTTCCATATTTTGATCTTG+TGG + chr8_4:11787066-11787085 None:intergenic 30.0%
! CTTTTAGTACCAGCAAGTTT+TGG + chr8_4:11785056-11785075 None:intergenic 35.0%
GAAAGAGTTGCAGATTAAGA+TGG - chr8_4:11785231-11785250 Msa1313710:CDS 35.0%
AAACTTCCACGTTTCAAATC+AGG + chr8_4:11785272-11785291 None:intergenic 35.0%
TATACCTATTGCCTAGAATG+CGG + chr8_4:11785331-11785350 None:intergenic 35.0%
! GAGAGACACTTATTTGAAAC+CGG + chr8_4:11785456-11785475 None:intergenic 35.0%
!! ACTTTCTCTCTCTGTTGTTT+TGG - chr8_4:11785604-11785623 Msa1313710:CDS 35.0%
AAACTTTAACATGTGCCCTT+AGG - chr8_4:11785894-11785913 Msa1313710:CDS 35.0%
AACTTTAACATGTGCCCTTA+GGG - chr8_4:11785895-11785914 Msa1313710:CDS 35.0%
!! TATCCATTTTTCCCTTGACA+AGG - chr8_4:11785961-11785980 Msa1313710:CDS 35.0%
AAACCTTGTCAAGGGAAAAA+TGG + chr8_4:11785967-11785986 None:intergenic 35.0%
GAGGCGAATATCATAAAATG+GGG + chr8_4:11786119-11786138 None:intergenic 35.0%
GGAGGCGAATATCATAAAAT+GGG + chr8_4:11786120-11786139 None:intergenic 35.0%
TCCTTAAAAACAGCGTTGTA+GGG + chr8_4:11786142-11786161 None:intergenic 35.0%
TTCCTTAAAAACAGCGTTGT+AGG + chr8_4:11786143-11786162 None:intergenic 35.0%
! AAAGGTATAGGTGATCTTGA+TGG + chr8_4:11786219-11786238 None:intergenic 35.0%
TATTTGGAGACGAGTTTGAA+AGG + chr8_4:11786237-11786256 None:intergenic 35.0%
! ATGCAATGTTTTCACCAAAC+TGG - chr8_4:11786256-11786275 Msa1313710:intron 35.0%
! CATGTATTTTCACAAGAGGA+AGG + chr8_4:11786370-11786389 None:intergenic 35.0%
CTTCCTCTTGTGAAAATACA+TGG - chr8_4:11786368-11786387 Msa1313710:intron 35.0%
! TGACCATGTATTTTCACAAG+AGG + chr8_4:11786374-11786393 None:intergenic 35.0%
GTCACCAATATTAAATGGAG+TGG + chr8_4:11786461-11786480 None:intergenic 35.0%
ACTGCTGCATTAATGAACTT+TGG + chr8_4:11786495-11786514 None:intergenic 35.0%
AGTCAATTATCAAAGCCTTG+AGG - chr8_4:11786555-11786574 Msa1313710:intron 35.0%
TGGAATCAGATGAATAATCG+AGG + chr8_4:11786597-11786616 None:intergenic 35.0%
CGATTATTCATCTGATTCCA+AGG - chr8_4:11786597-11786616 Msa1313710:intron 35.0%
! GATGATGATGATTGGAGTTT+AGG + chr8_4:11786633-11786652 None:intergenic 35.0%
!! CTGATCTTGATGATGATGAT+TGG + chr8_4:11786641-11786660 None:intergenic 35.0%
!!! TGTAGATTTTGAGATGAGGT+TGG + chr8_4:11786673-11786692 None:intergenic 35.0%
ACCTCATCTCAAAATCTACA+AGG - chr8_4:11786673-11786692 Msa1313710:intron 35.0%
!!! TCCTTGTAGATTTTGAGATG+AGG + chr8_4:11786677-11786696 None:intergenic 35.0%
ATGACCATGTATCTTCATCA+GGG + chr8_4:11786795-11786814 None:intergenic 35.0%
AATGACCATGTATCTTCATC+AGG + chr8_4:11786796-11786815 None:intergenic 35.0%
TACATGGTCATTAGATTGTG+TGG - chr8_4:11786804-11786823 Msa1313710:CDS 35.0%
! TTTTGCTGGGTAGTATAACT+TGG + chr8_4:11786859-11786878 None:intergenic 35.0%
!! GGTTGACTAAATTGTTTTGC+TGG + chr8_4:11786873-11786892 None:intergenic 35.0%
TCAATGTCATGATCATCACT+TGG - chr8_4:11786921-11786940 Msa1313710:intron 35.0%
GACTAATTGAGGCACAATAT+TGG + chr8_4:11786959-11786978 None:intergenic 35.0%
! AATCTAGGATGCAACAATCA+TGG + chr8_4:11787002-11787021 None:intergenic 35.0%
CCTTGGAATCAAATGAATCT+AGG + chr8_4:11787017-11787036 None:intergenic 35.0%
CCTAGATTCATTTGATTCCA+AGG - chr8_4:11787014-11787033 Msa1313710:intron 35.0%
ATAATTACATTGATGCCCTC+AGG - chr8_4:11787097-11787116 Msa1313710:CDS 35.0%
ACAAACCCTAGTATTCCTTT+AGG - chr8_4:11787162-11787181 Msa1313710:CDS 35.0%
! CTTTTAGTACCAGCAAGTTT+TGG + chr8_4:11785056-11785075 None:intergenic 35.0%
GAAAGAGTTGCAGATTAAGA+TGG - chr8_4:11785231-11785250 Msa1313710:CDS 35.0%
AAACTTCCACGTTTCAAATC+AGG + chr8_4:11785272-11785291 None:intergenic 35.0%
TATACCTATTGCCTAGAATG+CGG + chr8_4:11785331-11785350 None:intergenic 35.0%
! GAGAGACACTTATTTGAAAC+CGG + chr8_4:11785456-11785475 None:intergenic 35.0%
!! ACTTTCTCTCTCTGTTGTTT+TGG - chr8_4:11785604-11785623 Msa1313710:CDS 35.0%
AAACTTTAACATGTGCCCTT+AGG - chr8_4:11785894-11785913 Msa1313710:CDS 35.0%
AACTTTAACATGTGCCCTTA+GGG - chr8_4:11785895-11785914 Msa1313710:CDS 35.0%
!! TATCCATTTTTCCCTTGACA+AGG - chr8_4:11785961-11785980 Msa1313710:CDS 35.0%
AAACCTTGTCAAGGGAAAAA+TGG + chr8_4:11785967-11785986 None:intergenic 35.0%
GAGGCGAATATCATAAAATG+GGG + chr8_4:11786119-11786138 None:intergenic 35.0%
GGAGGCGAATATCATAAAAT+GGG + chr8_4:11786120-11786139 None:intergenic 35.0%
TCCTTAAAAACAGCGTTGTA+GGG + chr8_4:11786142-11786161 None:intergenic 35.0%
TTCCTTAAAAACAGCGTTGT+AGG + chr8_4:11786143-11786162 None:intergenic 35.0%
! AAAGGTATAGGTGATCTTGA+TGG + chr8_4:11786219-11786238 None:intergenic 35.0%
TATTTGGAGACGAGTTTGAA+AGG + chr8_4:11786237-11786256 None:intergenic 35.0%
! ATGCAATGTTTTCACCAAAC+TGG - chr8_4:11786256-11786275 Msa1313710:intron 35.0%
! CATGTATTTTCACAAGAGGA+AGG + chr8_4:11786370-11786389 None:intergenic 35.0%
CTTCCTCTTGTGAAAATACA+TGG - chr8_4:11786368-11786387 Msa1313710:intron 35.0%
! TGACCATGTATTTTCACAAG+AGG + chr8_4:11786374-11786393 None:intergenic 35.0%
GTCACCAATATTAAATGGAG+TGG + chr8_4:11786461-11786480 None:intergenic 35.0%
ACTGCTGCATTAATGAACTT+TGG + chr8_4:11786495-11786514 None:intergenic 35.0%
AGTCAATTATCAAAGCCTTG+AGG - chr8_4:11786555-11786574 Msa1313710:intron 35.0%
TGGAATCAGATGAATAATCG+AGG + chr8_4:11786597-11786616 None:intergenic 35.0%
CGATTATTCATCTGATTCCA+AGG - chr8_4:11786597-11786616 Msa1313710:intron 35.0%
! GATGATGATGATTGGAGTTT+AGG + chr8_4:11786633-11786652 None:intergenic 35.0%
!! CTGATCTTGATGATGATGAT+TGG + chr8_4:11786641-11786660 None:intergenic 35.0%
!!! TGTAGATTTTGAGATGAGGT+TGG + chr8_4:11786673-11786692 None:intergenic 35.0%
ACCTCATCTCAAAATCTACA+AGG - chr8_4:11786673-11786692 Msa1313710:intron 35.0%
!!! TCCTTGTAGATTTTGAGATG+AGG + chr8_4:11786677-11786696 None:intergenic 35.0%
ATGACCATGTATCTTCATCA+GGG + chr8_4:11786795-11786814 None:intergenic 35.0%
AATGACCATGTATCTTCATC+AGG + chr8_4:11786796-11786815 None:intergenic 35.0%
TACATGGTCATTAGATTGTG+TGG - chr8_4:11786804-11786823 Msa1313710:CDS 35.0%
! TTTTGCTGGGTAGTATAACT+TGG + chr8_4:11786859-11786878 None:intergenic 35.0%
!! GGTTGACTAAATTGTTTTGC+TGG + chr8_4:11786873-11786892 None:intergenic 35.0%
TCAATGTCATGATCATCACT+TGG - chr8_4:11786921-11786940 Msa1313710:intron 35.0%
GACTAATTGAGGCACAATAT+TGG + chr8_4:11786959-11786978 None:intergenic 35.0%
! AATCTAGGATGCAACAATCA+TGG + chr8_4:11787002-11787021 None:intergenic 35.0%
CCTTGGAATCAAATGAATCT+AGG + chr8_4:11787017-11787036 None:intergenic 35.0%
CCTAGATTCATTTGATTCCA+AGG - chr8_4:11787014-11787033 Msa1313710:intron 35.0%
ATAATTACATTGATGCCCTC+AGG - chr8_4:11787097-11787116 Msa1313710:CDS 35.0%
ACAAACCCTAGTATTCCTTT+AGG - chr8_4:11787162-11787181 Msa1313710:CDS 35.0%
AGTTCTGTTCCAAAACTTGC+TGG - chr8_4:11785044-11785063 Msa1313710:CDS 40.0%
! CTAAGACCTGATTTGAAACG+TGG - chr8_4:11785263-11785282 Msa1313710:CDS 40.0%
TCATAAAATGGGGTGAAGGA+TGG + chr8_4:11786109-11786128 None:intergenic 40.0%
GGGAGGCGAATATCATAAAA+TGG + chr8_4:11786121-11786140 None:intergenic 40.0%
CCTTAAAAACAGCGTTGTAG+GGG + chr8_4:11786141-11786160 None:intergenic 40.0%
!! TATAGGTGATCTTGATGGTG+AGG + chr8_4:11786214-11786233 None:intergenic 40.0%
! GAGACGAGTTTGAAAGGTAT+AGG + chr8_4:11786231-11786250 None:intergenic 40.0%
! TTTTCACCAAACTGGTACAG+TGG - chr8_4:11786264-11786283 Msa1313710:intron 40.0%
!!! ATTTTGATTGGGTAGGAACC+TGG + chr8_4:11786314-11786333 None:intergenic 40.0%
TCACAAGAGGAAGGATTAGA+TGG + chr8_4:11786361-11786380 None:intergenic 40.0%
GGCACCACTCCATTTAATAT+TGG - chr8_4:11786454-11786473 Msa1313710:intron 40.0%
TGCTACATGCATAATCCTCA+AGG + chr8_4:11786573-11786592 None:intergenic 40.0%
! GTTTAGGATCACATGTTCCT+TGG + chr8_4:11786617-11786636 None:intergenic 40.0%
!!! GATTTTGAGATGAGGTTGGA+AGG + chr8_4:11786669-11786688 None:intergenic 40.0%
TCATCAGGGAAAGGATTAGA+TGG + chr8_4:11786781-11786800 None:intergenic 40.0%
CATGTATCTTCATCAGGGAA+AGG + chr8_4:11786790-11786809 None:intergenic 40.0%
CTTTCCCTGATGAAGATACA+TGG - chr8_4:11786788-11786807 Msa1313710:CDS 40.0%
AGTCAACCCAATTGCATCAA+TGG - chr8_4:11786885-11786904 Msa1313710:CDS 40.0%
! GTTGTGCCATTGATGCAATT+GGG + chr8_4:11786894-11786913 None:intergenic 40.0%
! TGTTGTGCCATTGATGCAAT+TGG + chr8_4:11786895-11786914 None:intergenic 40.0%
AGTCAATGATCAAAGCCTTG+AGG - chr8_4:11786975-11786994 Msa1313710:intron 40.0%
ACTAAGAGCTTCATGTTCCT+TGG + chr8_4:11787034-11787053 None:intergenic 40.0%
TGATGGCAATGAAAACCTGA+GGG + chr8_4:11787115-11787134 None:intergenic 40.0%
ATGATGGCAATGAAAACCTG+AGG + chr8_4:11787116-11787135 None:intergenic 40.0%
! ACCCTAGTATTCCTTTAGGA+TGG - chr8_4:11787166-11787185 Msa1313710:CDS 40.0%
CCCATCCTAAAGGAATACTA+GGG + chr8_4:11787170-11787189 None:intergenic 40.0%
!! CCCTAGTATTCCTTTAGGAT+GGG - chr8_4:11787167-11787186 Msa1313710:CDS 40.0%
TCCCATCCTAAAGGAATACT+AGG + chr8_4:11787171-11787190 None:intergenic 40.0%
AGTTCTGTTCCAAAACTTGC+TGG - chr8_4:11785044-11785063 Msa1313710:CDS 40.0%
! CTAAGACCTGATTTGAAACG+TGG - chr8_4:11785263-11785282 Msa1313710:CDS 40.0%
TCATAAAATGGGGTGAAGGA+TGG + chr8_4:11786109-11786128 None:intergenic 40.0%
GGGAGGCGAATATCATAAAA+TGG + chr8_4:11786121-11786140 None:intergenic 40.0%
CCTTAAAAACAGCGTTGTAG+GGG + chr8_4:11786141-11786160 None:intergenic 40.0%
!! TATAGGTGATCTTGATGGTG+AGG + chr8_4:11786214-11786233 None:intergenic 40.0%
! GAGACGAGTTTGAAAGGTAT+AGG + chr8_4:11786231-11786250 None:intergenic 40.0%
! TTTTCACCAAACTGGTACAG+TGG - chr8_4:11786264-11786283 Msa1313710:intron 40.0%
!!! ATTTTGATTGGGTAGGAACC+TGG + chr8_4:11786314-11786333 None:intergenic 40.0%
TCACAAGAGGAAGGATTAGA+TGG + chr8_4:11786361-11786380 None:intergenic 40.0%
GGCACCACTCCATTTAATAT+TGG - chr8_4:11786454-11786473 Msa1313710:intron 40.0%
TGCTACATGCATAATCCTCA+AGG + chr8_4:11786573-11786592 None:intergenic 40.0%
! GTTTAGGATCACATGTTCCT+TGG + chr8_4:11786617-11786636 None:intergenic 40.0%
!!! GATTTTGAGATGAGGTTGGA+AGG + chr8_4:11786669-11786688 None:intergenic 40.0%
TCATCAGGGAAAGGATTAGA+TGG + chr8_4:11786781-11786800 None:intergenic 40.0%
CATGTATCTTCATCAGGGAA+AGG + chr8_4:11786790-11786809 None:intergenic 40.0%
CTTTCCCTGATGAAGATACA+TGG - chr8_4:11786788-11786807 Msa1313710:CDS 40.0%
AGTCAACCCAATTGCATCAA+TGG - chr8_4:11786885-11786904 Msa1313710:CDS 40.0%
! GTTGTGCCATTGATGCAATT+GGG + chr8_4:11786894-11786913 None:intergenic 40.0%
! TGTTGTGCCATTGATGCAAT+TGG + chr8_4:11786895-11786914 None:intergenic 40.0%
AGTCAATGATCAAAGCCTTG+AGG - chr8_4:11786975-11786994 Msa1313710:intron 40.0%
ACTAAGAGCTTCATGTTCCT+TGG + chr8_4:11787034-11787053 None:intergenic 40.0%
TGATGGCAATGAAAACCTGA+GGG + chr8_4:11787115-11787134 None:intergenic 40.0%
ATGATGGCAATGAAAACCTG+AGG + chr8_4:11787116-11787135 None:intergenic 40.0%
! ACCCTAGTATTCCTTTAGGA+TGG - chr8_4:11787166-11787185 Msa1313710:CDS 40.0%
CCCATCCTAAAGGAATACTA+GGG + chr8_4:11787170-11787189 None:intergenic 40.0%
!! CCCTAGTATTCCTTTAGGAT+GGG - chr8_4:11787167-11787186 Msa1313710:CDS 40.0%
TCCCATCCTAAAGGAATACT+AGG + chr8_4:11787171-11787190 None:intergenic 40.0%
! CTCTTGCTGTAGCAAAGAGA+AGG - chr8_4:11784941-11784960 Msa1313710:CDS 45.0%
AGCAAAGAGAAGGTCAACAG+AGG - chr8_4:11784951-11784970 Msa1313710:CDS 45.0%
AGAAGGTCAACAGAGGACTA+TGG - chr8_4:11784958-11784977 Msa1313710:CDS 45.0%
CTTATGGACATGATTGCTGC+TGG - chr8_4:11785021-11785040 Msa1313710:CDS 45.0%
ATAGAACTCCACCGCATTCT+AGG - chr8_4:11785317-11785336 Msa1313710:CDS 45.0%
! CATGCTAACTTGTGCCCTAA+GGG + chr8_4:11785912-11785931 None:intergenic 45.0%
! TCATGCTAACTTGTGCCCTA+AGG + chr8_4:11785913-11785932 None:intergenic 45.0%
TAAAAACAGCGTTGTAGGGG+AGG + chr8_4:11786138-11786157 None:intergenic 45.0%
!!! CCCCTACAACGCTGTTTTTA+AGG - chr8_4:11786138-11786157 Msa1313710:intron 45.0%
TGTCTACCACTGTACCAGTT+TGG + chr8_4:11786273-11786292 None:intergenic 45.0%
! TTTGAGATGAGGTTGGAAGG+TGG + chr8_4:11786666-11786685 None:intergenic 45.0%
TGCAACAATCATGGTCCTCA+AGG + chr8_4:11786993-11787012 None:intergenic 45.0%
ACTGTTTGGCTGCTTGATGA+TGG + chr8_4:11787132-11787151 None:intergenic 45.0%
! CTCTTGCTGTAGCAAAGAGA+AGG - chr8_4:11784941-11784960 Msa1313710:CDS 45.0%
AGCAAAGAGAAGGTCAACAG+AGG - chr8_4:11784951-11784970 Msa1313710:CDS 45.0%
AGAAGGTCAACAGAGGACTA+TGG - chr8_4:11784958-11784977 Msa1313710:CDS 45.0%
CTTATGGACATGATTGCTGC+TGG - chr8_4:11785021-11785040 Msa1313710:CDS 45.0%
ATAGAACTCCACCGCATTCT+AGG - chr8_4:11785317-11785336 Msa1313710:CDS 45.0%
! CATGCTAACTTGTGCCCTAA+GGG + chr8_4:11785912-11785931 None:intergenic 45.0%
! TCATGCTAACTTGTGCCCTA+AGG + chr8_4:11785913-11785932 None:intergenic 45.0%
TAAAAACAGCGTTGTAGGGG+AGG + chr8_4:11786138-11786157 None:intergenic 45.0%
!!! CCCCTACAACGCTGTTTTTA+AGG - chr8_4:11786138-11786157 Msa1313710:intron 45.0%
TGTCTACCACTGTACCAGTT+TGG + chr8_4:11786273-11786292 None:intergenic 45.0%
! TTTGAGATGAGGTTGGAAGG+TGG + chr8_4:11786666-11786685 None:intergenic 45.0%
TGCAACAATCATGGTCCTCA+AGG + chr8_4:11786993-11787012 None:intergenic 45.0%
ACTGTTTGGCTGCTTGATGA+TGG + chr8_4:11787132-11787151 None:intergenic 45.0%
!!! AATTTTTTTATATTTTTTTG+AGG - chr8_4:11785100-11785119 Msa1313710:CDS 5.0%
!!! AATTTTTTTATATTTTTTTG+AGG - chr8_4:11785100-11785119 Msa1313710:CDS 5.0%
TGTGTAGGTCTGCAGAGATG+TGG - chr8_4:11785209-11785228 Msa1313710:CDS 50.0%
TCCACCGCATTCTAGGCAAT+AGG - chr8_4:11785324-11785343 Msa1313710:CDS 50.0%
ACCTATTGCCTAGAATGCGG+TGG + chr8_4:11785328-11785347 None:intergenic 50.0%
CAAATTGCCAAGCACTTGCC+AGG - chr8_4:11786010-11786029 Msa1313710:CDS 50.0%
CAAGCACTTGCCAGGAAGAA+CGG - chr8_4:11786018-11786037 Msa1313710:CDS 50.0%
AAGCACTTGCCAGGAAGAAC+GGG - chr8_4:11786019-11786038 Msa1313710:CDS 50.0%
ACCTCATTACCCGTTCTTCC+TGG + chr8_4:11786031-11786050 None:intergenic 50.0%
TGTGTAGGTCTGCAGAGATG+TGG - chr8_4:11785209-11785228 Msa1313710:CDS 50.0%
TCCACCGCATTCTAGGCAAT+AGG - chr8_4:11785324-11785343 Msa1313710:CDS 50.0%
ACCTATTGCCTAGAATGCGG+TGG + chr8_4:11785328-11785347 None:intergenic 50.0%
CAAATTGCCAAGCACTTGCC+AGG - chr8_4:11786010-11786029 Msa1313710:CDS 50.0%
CAAGCACTTGCCAGGAAGAA+CGG - chr8_4:11786018-11786037 Msa1313710:CDS 50.0%
AAGCACTTGCCAGGAAGAAC+GGG - chr8_4:11786019-11786038 Msa1313710:CDS 50.0%
ACCTCATTACCCGTTCTTCC+TGG + chr8_4:11786031-11786050 None:intergenic 50.0%
CGTTCTTCCTGGCAAGTGCT+TGG + chr8_4:11786020-11786039 None:intergenic 55.0%
GCCAGGAAGAACGGGTAATG+AGG - chr8_4:11786027-11786046 Msa1313710:CDS 55.0%
CGTTCTTCCTGGCAAGTGCT+TGG + chr8_4:11786020-11786039 None:intergenic 55.0%
GCCAGGAAGAACGGGTAATG+AGG - chr8_4:11786027-11786046 Msa1313710:CDS 55.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 11784930 11787197 11784930 ID=Msa1313710;Name=Msa1313710
chr8_4 mRNA 11784930 11787197 11784930 ID=Msa1313710-mRNA-1;Parent=Msa1313710;Name=Msa1313710-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|3|0|486
chr8_4 exon 11787062 11787197 11787062 ID=Msa1313710-mRNA-1:exon:4425;Parent=Msa1313710-mRNA-1
chr8_4 exon 11786782 11786911 11786782 ID=Msa1313710-mRNA-1:exon:4424;Parent=Msa1313710-mRNA-1
chr8_4 exon 11784930 11786124 11784930 ID=Msa1313710-mRNA-1:exon:4423;Parent=Msa1313710-mRNA-1
chr8_4 CDS 11787062 11787197 11787062 ID=Msa1313710-mRNA-1:cds;Parent=Msa1313710-mRNA-1
chr8_4 CDS 11786782 11786911 11786782 ID=Msa1313710-mRNA-1:cds;Parent=Msa1313710-mRNA-1
chr8_4 CDS 11784930 11786124 11784930 ID=Msa1313710-mRNA-1:cds;Parent=Msa1313710-mRNA-1
Gene Sequence

>Msa1313710

ATGGCACATCACTCTTGCTGTAGCAAAGAGAAGGTCAACAGAGGACTATGGTCACCTGAAGAAGATGAAAAACTCATCAAATACATCACAACTTATGGACATGATTGCTGCTGGAGTTCTGTTCCAAAACTTGCTGGTCTGCAGAGATGTGGAAAGAGTTGCAGATTAAGATGGATAAATTATCTAAGACCTGATTTGAAACGTGGAAGTTTCTCTTATGAAGAAGTAGCACTCATCATAGAACTCCACCGCATTCTAGGCAATAGATGGACACAAATTGCCAAGCACTTGCCAGGAAGAACGGGTAATGAGGTGAAAAACTTTTGGAATTCAAGCATAACGAAAAAACTCCTTTCTGATGATATTGTTCCATCCTTCACCCCATTTTATGATATTCGCCTCCCCTACAACGCTGTTTTTAAGGAAAGTTTTTTTCCTTTAAATGCAAACCCTAATGTGATGCTAAACTTCAATCCTCACCATCAAGATCACCTATACCTTTCAAACTCGTCTCCAAATATGCAATGTTTTCACCAAACTGGTACAGTGGTAGACATCAATAATCATTTCAATGCCAGGTTCCTACCCAATCAAAATCCAATTATACCTGAAATAGTACTACCATCTAATCCTTCCTCTTGTGAAAATACATGGTCATTGGATTGTGTAGCTCTTGATCACAATCCAAATCAATTGGAAAATCAAATTTCAAAAAGTGGCACCACTCCATTTAATATTGGTGACACATCAATCAACCAAAGTTCATTAATGCAGCAGTATGATCAATATCATGATCATGAAGCCATTGTGCCTAAATTAGTCAATTATCAAAGCCTTGAGGATTATGCATGTAGCATCCTCGATTATTCATCTGATTCCAAGGAACATGTGATCCTAAACTCCAATCATCATCATCAAGATCAGTTCCACCTTCCAACCTCATCTCAAAATCTACAAGGAAATTTTTACCAAATTGATACAAACGTAGACATGATCAATAACCATTATAATCCCAATTTCCTTGACATTGAGAATCAAATACCATCTAATCCTTTCCCTGATGAAGATACATGGTCATTAGATTGTGTGGCTCTTCATATCAATAGAAATAAAGAAAATCCAAGTTATACTACCCAGCAAAACAATTTAGTCAACCCAATTGCATCAATGGCACAACAATATGATCAATGTCATGATCATCACTTGGTTGAAACTGAACCCAATATTGTGCCTCAATTAGTCAATGATCAAAGCCTTGAGGACCATGATTGTTGCATCCTAGATTCATTTGATTCCAAGGAACATGAAGCTCTTAGTATTATTTATCCACAAGATCAAAATATGGAAACTAACCAATTGGATAATTACATTGATGCCCTCAGGTTTTCATTGCCATCATCAAGCAGCCAAACAGTTAATTACAATACAAACCCTAGTATTCCTTTAGGATGGGAGCCATAG
Protein sequence

>Msa1313710

MAHHSCCSKEKVNRGLWSPEEDEKLIKYITTYGHDCCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSYEEVALIIELHRILGNRWTQIAKHLPGRTGNEVKNFWNSSITKKLLSDDIVPSFTPFYDIRLPYNAVFKESFFPLNANPNVMLNFNPHHQDHLYLSNSSPNMQCFHQTGTVVDINNHFNARFLPNQNPIIPEIVLPSNPSSCENTWSLDCVALDHNPNQLENQISKSGTTPFNIGDTSINQSSLMQQYDQYHDHEAIVPKLVNYQSLEDYACSILDYSSDSKEHVILNSNHHHQDQFHLPTSSQNLQGNFYQIDTNVDMINNHYNPNFLDIENQIPSNPFPDEDTWSLDCVALHINRNKENPSYTTQQNNLVNPIASMAQQYDQCHDHHLVETEPNIVPQLVNDQSLEDHDCCILDSFDSKEHEALSIIYPQDQNMETNQLDNYIDALRFSLPSSSSQTVNYNTNPSIPLGWEP*