Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313850 | sp|Q8LDF9|HMGB7_ARATH | 45.033 | 151 | 59 | 5 | 124 | 253 | 32 | 179 | 1.02e-24 | 102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313850 | G7LI68 | 75.486 | 257 | 23 | 3 | 1 | 228 | 1 | 246 | 7.32e-126 | 368 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1313850 | TR | HMG |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313850 | MtrunA17_Chr8g0342651 | 68.482 | 257 | 21 | 3 | 1 | 228 | 1 | 226 | 2.54e-113 | 326 |
| Msa1313850 | MtrunA17_Chr1g0212341 | 74.468 | 188 | 30 | 3 | 124 | 293 | 23 | 210 | 8.49e-79 | 238 |
| Msa1313850 | MtrunA17_Chr3g0143991 | 48.315 | 89 | 46 | 0 | 175 | 263 | 32 | 120 | 4.61e-20 | 84.7 |
| Msa1313850 | MtrunA17_Chr5g0407011 | 42.857 | 105 | 56 | 1 | 172 | 272 | 16 | 120 | 2.88e-18 | 79.7 |
| Msa1313850 | MtrunA17_Chr7g0242251 | 45.946 | 74 | 40 | 0 | 184 | 257 | 47 | 120 | 1.68e-15 | 72.8 |
| Msa1313850 | MtrunA17_Chr5g0438531 | 34.337 | 166 | 68 | 4 | 11 | 144 | 4 | 160 | 2.64e-14 | 69.7 |
| Msa1313850 | MtrunA17_Chr8g0370431 | 34.545 | 110 | 66 | 2 | 172 | 276 | 16 | 124 | 3.58e-14 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313850 | AT5G23420.1 | 45.033 | 151 | 59 | 5 | 124 | 253 | 32 | 179 | 1.04e-25 | 102 |
| Msa1313850 | AT4G35570.1 | 46.835 | 79 | 42 | 0 | 179 | 257 | 25 | 103 | 7.85e-18 | 78.2 |
| Msa1313850 | AT4G35570.2 | 46.835 | 79 | 42 | 0 | 179 | 257 | 25 | 103 | 7.85e-18 | 78.2 |
| Msa1313850 | AT3G51880.2 | 39.286 | 112 | 67 | 1 | 169 | 280 | 35 | 145 | 5.60e-17 | 77.8 |
| Msa1313850 | AT3G51880.5 | 39.286 | 112 | 67 | 1 | 169 | 280 | 35 | 145 | 7.86e-17 | 77.0 |
| Msa1313850 | AT3G51880.1 | 39.286 | 112 | 67 | 1 | 169 | 280 | 35 | 145 | 7.86e-17 | 77.0 |
| Msa1313850 | AT3G51880.3 | 39.286 | 112 | 67 | 1 | 169 | 280 | 35 | 145 | 7.86e-17 | 77.0 |
| Msa1313850 | AT3G51880.4 | 39.806 | 103 | 61 | 1 | 169 | 271 | 35 | 136 | 1.91e-16 | 75.5 |
| Msa1313850 | AT2G17560.3 | 39.785 | 93 | 55 | 1 | 179 | 270 | 25 | 117 | 7.44e-15 | 70.5 |
| Msa1313850 | AT2G17560.2 | 39.785 | 93 | 55 | 1 | 179 | 270 | 25 | 117 | 8.42e-15 | 70.5 |
| Msa1313850 | AT2G17560.1 | 39.785 | 93 | 55 | 1 | 179 | 270 | 25 | 117 | 8.42e-15 | 70.5 |
| Msa1313850 | AT1G20693.3 | 41.837 | 98 | 55 | 2 | 176 | 271 | 25 | 122 | 3.89e-14 | 68.9 |
| Msa1313850 | AT1G20693.1 | 41.837 | 98 | 55 | 2 | 176 | 271 | 25 | 122 | 3.98e-14 | 68.9 |
| Msa1313850 | AT1G20693.2 | 41.837 | 98 | 55 | 2 | 176 | 271 | 25 | 122 | 4.04e-14 | 68.6 |
| Msa1313850 | AT1G20696.1 | 41.748 | 103 | 58 | 2 | 170 | 271 | 18 | 119 | 5.45e-14 | 68.2 |
| Msa1313850 | AT1G20696.5 | 41.304 | 92 | 53 | 1 | 170 | 261 | 18 | 108 | 5.13e-13 | 65.5 |
| Msa1313850 | AT1G20696.2 | 41.304 | 92 | 53 | 1 | 170 | 261 | 18 | 108 | 2.39e-12 | 63.9 |
Find 67 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATGTCTTAGTTATATTT+AGG | 0.194675 | 8_4:+12127523 | Msa1313850:three_prime_UTR |
| GGCGAAAGCACTGCCATCTT+TGG | 0.263194 | 8_4:-12126211 | None:intergenic |
| CTGTTGAAACGGCTTGATTT+AGG | 0.266168 | 8_4:+12127480 | Msa1313850:three_prime_UTR |
| CGAGTTGAATCAAAGCTTCT+TGG | 0.289462 | 8_4:-12126179 | None:intergenic |
| GAGGAGTAGTGGTAGCATTT+TGG | 0.290072 | 8_4:+12127436 | Msa1313850:exon |
| TTGCAGACGAGGAGGAGATC+AGG | 0.340582 | 8_4:+12125822 | Msa1313850:CDS |
| ACATGTCTTAGTTATATTTA+GGG | 0.341390 | 8_4:+12127524 | Msa1313850:three_prime_UTR |
| AGGCTAAAGCTGTATGGGTT+TGG | 0.349267 | 8_4:+12127500 | Msa1313850:three_prime_UTR |
| TAAAGTTGGGAAAGGGAAAA+AGG | 0.356050 | 8_4:+12126701 | Msa1313850:CDS |
| TGTTGACCTTGTTTGCTTCA+AGG | 0.365012 | 8_4:-12125742 | None:intergenic |
| TGTGATGCGCATCATGTTGA+TGG | 0.383923 | 8_4:+12126111 | Msa1313850:CDS |
| TCTTCAGGATCAGCGTTAAT+CGG | 0.386915 | 8_4:-12125767 | None:intergenic |
| TGATTTAGGCTAAAGCTGTA+TGG | 0.389291 | 8_4:+12127494 | Msa1313850:three_prime_UTR |
| AATCAAAGCTTCTTGGGTAA+TGG | 0.393707 | 8_4:-12126172 | None:intergenic |
| TCTTCCGCCTCTCCTGGTGC+AGG | 0.396540 | 8_4:-12127403 | None:intergenic |
| TTGATTCAAAGGATGTTAAG+AGG | 0.429062 | 8_4:+12126897 | Msa1313850:CDS |
| GTTAACTCTTCCGCCTCTCC+TGG | 0.437006 | 8_4:-12127409 | None:intergenic |
| CAATGCGAAAATAATGTAAC+CGG | 0.447308 | 8_4:-12127620 | None:intergenic |
| ACTTGATTTCTCTGTTGAAA+CGG | 0.447683 | 8_4:+12127469 | Msa1313850:three_prime_UTR |
| CTTCCGCCTCTCCTGGTGCA+GGG | 0.453369 | 8_4:-12127402 | None:intergenic |
| ATGGCAGTGCTTTCGCCAAA+TGG | 0.458037 | 8_4:+12126217 | Msa1313850:CDS |
| ACTTTAGTCCGTTTCGCAGT+TGG | 0.458641 | 8_4:-12126684 | None:intergenic |
| GGAAGGCCAATCTGATGATA+AGG | 0.467371 | 8_4:+12127375 | Msa1313850:CDS |
| GGAAGCTAATCTTGATTCAA+AGG | 0.468919 | 8_4:+12126886 | Msa1313850:CDS |
| TTATTGATATGTCGTTTGAC+TGG | 0.469628 | 8_4:-12127667 | None:intergenic |
| TCACAAATCTTCTTTGAAGC+AGG | 0.469888 | 8_4:-12126093 | None:intergenic |
| GATTTAGGCTAAAGCTGTAT+GGG | 0.472891 | 8_4:+12127495 | Msa1313850:three_prime_UTR |
| ACTGCGAAACGGACTAAAGT+TGG | 0.477591 | 8_4:+12126687 | Msa1313850:CDS |
| GGGCTTCCTTATCATCAGAT+TGG | 0.481597 | 8_4:-12127381 | None:intergenic |
| AGCCCCTGCACCAGGAGAGG+CGG | 0.489136 | 8_4:+12127399 | Msa1313850:CDS |
| CTCGCAAAATGTGCCAAAGA+TGG | 0.495720 | 8_4:+12126198 | Msa1313850:CDS |
| GCCAAAATCAAAATGAATCT+CGG | 0.501868 | 8_4:+12126401 | Msa1313850:CDS |
| GAGTTGAATCAAAGCTTCTT+GGG | 0.504888 | 8_4:-12126178 | None:intergenic |
| AGAAATTCTGACGAAAGTCT+TGG | 0.505562 | 8_4:+12126134 | Msa1313850:CDS |
| CTGCGAAACGGACTAAAGTT+GGG | 0.511483 | 8_4:+12126688 | Msa1313850:CDS |
| AGTTAACAGATGAGGAGTAG+TGG | 0.515594 | 8_4:+12127425 | Msa1313850:CDS |
| GATAAGGAAGCCCCTGCACC+AGG | 0.518868 | 8_4:+12127391 | Msa1313850:CDS |
| TAACCGTAGGTTTGCAGACG+AGG | 0.521173 | 8_4:+12125811 | Msa1313850:CDS |
| GGATCGGGAGGAATCTGATA+AGG | 0.523228 | 8_4:+12127354 | Msa1313850:intron |
| GGAAGCCCCTGCACCAGGAG+AGG | 0.530934 | 8_4:+12127396 | Msa1313850:CDS |
| TTCCGCCTCTCCTGGTGCAG+GGG | 0.535721 | 8_4:-12127401 | None:intergenic |
| ATGAAAAGAAAGAAATCAGT+TGG | 0.544749 | 8_4:-12126753 | None:intergenic |
| CCTTGGAATATTGCTAATGC+CGG | 0.549723 | 8_4:+12127601 | Msa1313850:three_prime_UTR |
| CAAAAGAACCAACTGCGAAA+CGG | 0.556686 | 8_4:+12126676 | Msa1313850:CDS |
| GTAAGGAAGATTGCAAGAAG+TGG | 0.559179 | 8_4:+12127023 | Msa1313850:CDS |
| GAAGTGGAGGTCTTTGACTG+AGG | 0.567533 | 8_4:+12127039 | Msa1313850:CDS |
| TGCAGACGAGGAGGAGATCA+GGG | 0.567878 | 8_4:+12125823 | Msa1313850:CDS |
| TGAAATAGAAGATCCTCGAC+AGG | 0.569010 | 8_4:+12125919 | Msa1313850:CDS |
| TGATTCAAAGGATGTTAAGA+GGG | 0.586389 | 8_4:+12126898 | Msa1313850:CDS |
| AACGGACTAAAGTTGGGAAA+GGG | 0.587037 | 8_4:+12126694 | Msa1313850:CDS |
| CGGGAGGAATCTGATAAGGA+AGG | 0.587546 | 8_4:+12127358 | Msa1313850:CDS |
| AAACGGACTAAAGTTGGGAA+AGG | 0.588435 | 8_4:+12126693 | Msa1313850:CDS |
| GGCGGAAGAGTTAACAGATG+AGG | 0.594672 | 8_4:+12127417 | Msa1313850:CDS |
| AGCAGCATTATACAATTCCA+TGG | 0.595262 | 8_4:-12127224 | None:intergenic |
| CCTCCTCGTCTGCAAACCTA+CGG | 0.601229 | 8_4:-12125814 | None:intergenic |
| ATATAAGAGCATACCTGTCG+AGG | 0.602504 | 8_4:-12125932 | None:intergenic |
| AATGCTCCTTGAAGCAAACA+AGG | 0.617773 | 8_4:+12125736 | Msa1313850:CDS |
| AAATACTCGAATTTAACCGT+AGG | 0.618437 | 8_4:+12125798 | Msa1313850:CDS |
| GGCAGAATATGAGAAGGCCA+TGG | 0.621119 | 8_4:+12127207 | Msa1313850:CDS |
| AGGAAGATTGCAAGAAGTGG+AGG | 0.634274 | 8_4:+12127026 | Msa1313850:CDS |
| AGCCAGACTACACAAAACTC+TGG | 0.634663 | 8_4:+12125705 | Msa1313850:CDS |
| TATGTTTGTTCAGGATCGGG+AGG | 0.638946 | 8_4:+12127342 | Msa1313850:intron |
| CCGGCATTAGCAATATTCCA+AGG | 0.658115 | 8_4:-12127601 | None:intergenic |
| CCGTAGGTTTGCAGACGAGG+AGG | 0.664679 | 8_4:+12125814 | Msa1313850:CDS |
| ACTCATGGCAGAATATGAGA+AGG | 0.674706 | 8_4:+12127201 | Msa1313850:CDS |
| GAGATCAGGGAATCTAAATG+TGG | 0.675178 | 8_4:+12125836 | Msa1313850:CDS |
| AAAGGTTAAGGATTCTAATG+CGG | 0.688426 | 8_4:+12126719 | Msa1313850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGATAATAATTACTAATTA+GGG | - | chr8_4:12126450-12126469 | None:intergenic | 10.0% |
| !!! | TTTGATAATAATTACTAATT+AGG | - | chr8_4:12126451-12126470 | None:intergenic | 10.0% |
| !!! | GTTTTTGATTTTATTTAATT+TGG | + | chr8_4:12126499-12126518 | Msa1313850:intron | 10.0% |
| !!! | TTGATAATAATTACTAATTA+GGG | - | chr8_4:12126450-12126469 | None:intergenic | 10.0% |
| !!! | TTTGATAATAATTACTAATT+AGG | - | chr8_4:12126451-12126470 | None:intergenic | 10.0% |
| !!! | GTTTTTGATTTTATTTAATT+TGG | + | chr8_4:12126499-12126518 | Msa1313850:intron | 10.0% |
| !! | AATATTCACAAACTAAAATT+GGG | - | chr8_4:12126591-12126610 | None:intergenic | 15.0% |
| !!! | TTATTTTTTTGGAATTTTGT+AGG | + | chr8_4:12126643-12126662 | Msa1313850:intron | 15.0% |
| !! | AATATTCACAAACTAAAATT+GGG | - | chr8_4:12126591-12126610 | None:intergenic | 15.0% |
| !!! | TTATTTTTTTGGAATTTTGT+AGG | + | chr8_4:12126643-12126662 | Msa1313850:intron | 15.0% |
| !! | ATATTCACAAACTAAAATTG+GGG | - | chr8_4:12126590-12126609 | None:intergenic | 20.0% |
| !! | CAATATTCACAAACTAAAAT+TGG | - | chr8_4:12126592-12126611 | None:intergenic | 20.0% |
| !!! | CAATTTTAGTTTGTGAATAT+TGG | + | chr8_4:12126590-12126609 | Msa1313850:intron | 20.0% |
| !!! | ATTTCTTTCTTTTCATGTAA+GGG | + | chr8_4:12126760-12126779 | Msa1313850:intron | 20.0% |
| !!! | TGAGTTTAGAAAGATTTTTA+AGG | + | chr8_4:12126865-12126884 | Msa1313850:CDS | 20.0% |
| !!! | TGTTTTGATTAACTTATCTA+AGG | + | chr8_4:12126957-12126976 | Msa1313850:intron | 20.0% |
| !! | TGATATGGTTAAAATTGTTT+AGG | + | chr8_4:12127147-12127166 | Msa1313850:intron | 20.0% |
| !!! | AATGAAGTATGTTTTCTTTT+AGG | + | chr8_4:12127256-12127275 | Msa1313850:intron | 20.0% |
| !!! | GTTTGTTTCATAATATGTTT+TGG | + | chr8_4:12127286-12127305 | Msa1313850:intron | 20.0% |
| !! | AACATGTCTTAGTTATATTT+AGG | + | chr8_4:12127523-12127542 | Msa1313850:three_prime_UTR | 20.0% |
| !! | ACATGTCTTAGTTATATTTA+GGG | + | chr8_4:12127524-12127543 | Msa1313850:three_prime_UTR | 20.0% |
| !! | ATATTCACAAACTAAAATTG+GGG | - | chr8_4:12126590-12126609 | None:intergenic | 20.0% |
| !! | CAATATTCACAAACTAAAAT+TGG | - | chr8_4:12126592-12126611 | None:intergenic | 20.0% |
| !!! | CAATTTTAGTTTGTGAATAT+TGG | + | chr8_4:12126590-12126609 | Msa1313850:intron | 20.0% |
| !!! | ATTTCTTTCTTTTCATGTAA+GGG | + | chr8_4:12126760-12126779 | Msa1313850:intron | 20.0% |
| !!! | TGAGTTTAGAAAGATTTTTA+AGG | + | chr8_4:12126865-12126884 | Msa1313850:CDS | 20.0% |
| !!! | TGTTTTGATTAACTTATCTA+AGG | + | chr8_4:12126957-12126976 | Msa1313850:intron | 20.0% |
| !! | TGATATGGTTAAAATTGTTT+AGG | + | chr8_4:12127147-12127166 | Msa1313850:intron | 20.0% |
| !!! | AATGAAGTATGTTTTCTTTT+AGG | + | chr8_4:12127256-12127275 | Msa1313850:intron | 20.0% |
| !!! | GTTTGTTTCATAATATGTTT+TGG | + | chr8_4:12127286-12127305 | Msa1313850:intron | 20.0% |
| !! | AACATGTCTTAGTTATATTT+AGG | + | chr8_4:12127523-12127542 | Msa1313850:three_prime_UTR | 20.0% |
| !! | ACATGTCTTAGTTATATTTA+GGG | + | chr8_4:12127524-12127543 | Msa1313850:three_prime_UTR | 20.0% |
| !! | AGTATTTTCTTTTCTTCTTC+AGG | - | chr8_4:12125785-12125804 | None:intergenic | 25.0% |
| !!! | TAGATTTTGACGAAATAGAT+GGG | + | chr8_4:12125879-12125898 | Msa1313850:CDS | 25.0% |
| ! | AAAACGAAAATAAACAAGCA+CGG | - | chr8_4:12126484-12126503 | None:intergenic | 25.0% |
| ! | ATGAAAAGAAAGAAATCAGT+TGG | - | chr8_4:12126756-12126775 | None:intergenic | 25.0% |
| !! | GATTTCTTTCTTTTCATGTA+AGG | + | chr8_4:12126759-12126778 | Msa1313850:intron | 25.0% |
| ! | TTGTTTAGTTGAATTGTGTT+TGG | + | chr8_4:12126931-12126950 | Msa1313850:intron | 25.0% |
| ! | ATGTAATGCAAAAACTAGAT+TGG | + | chr8_4:12127001-12127020 | Msa1313850:intron | 25.0% |
| ! | TCAAAAACTTTATCCGAAAA+AGG | - | chr8_4:12127181-12127200 | None:intergenic | 25.0% |
| !! | AGTATTTTCTTTTCTTCTTC+AGG | - | chr8_4:12125785-12125804 | None:intergenic | 25.0% |
| !!! | TAGATTTTGACGAAATAGAT+GGG | + | chr8_4:12125879-12125898 | Msa1313850:CDS | 25.0% |
| ! | AAAACGAAAATAAACAAGCA+CGG | - | chr8_4:12126484-12126503 | None:intergenic | 25.0% |
| ! | ATGAAAAGAAAGAAATCAGT+TGG | - | chr8_4:12126756-12126775 | None:intergenic | 25.0% |
| !! | GATTTCTTTCTTTTCATGTA+AGG | + | chr8_4:12126759-12126778 | Msa1313850:intron | 25.0% |
| ! | TTGTTTAGTTGAATTGTGTT+TGG | + | chr8_4:12126931-12126950 | Msa1313850:intron | 25.0% |
| ! | ATGTAATGCAAAAACTAGAT+TGG | + | chr8_4:12127001-12127020 | Msa1313850:intron | 25.0% |
| ! | TCAAAAACTTTATCCGAAAA+AGG | - | chr8_4:12127181-12127200 | None:intergenic | 25.0% |
| AAATACTCGAATTTAACCGT+AGG | + | chr8_4:12125798-12125817 | Msa1313850:CDS | 30.0% | |
| !! | GTAGATTTTGACGAAATAGA+TGG | + | chr8_4:12125878-12125897 | Msa1313850:CDS | 30.0% |
| !! | AGATTTTGACGAAATAGATG+GGG | + | chr8_4:12125880-12125899 | Msa1313850:CDS | 30.0% |
| TTGTTTATTATCGAAGATGC+CGG | + | chr8_4:12126005-12126024 | Msa1313850:intron | 30.0% | |
| ! | AAAAAAGAGTGCAAACGAAA+TGG | - | chr8_4:12126262-12126281 | None:intergenic | 30.0% |
| !!! | TCATTTTGATTTTGGCTTCA+AGG | - | chr8_4:12126397-12126416 | None:intergenic | 30.0% |
| GCCAAAATCAAAATGAATCT+CGG | + | chr8_4:12126401-12126420 | Msa1313850:CDS | 30.0% | |
| !!! | ACCGAGATTCATTTTGATTT+TGG | - | chr8_4:12126405-12126424 | None:intergenic | 30.0% |
| AAAGGTTAAGGATTCTAATG+CGG | + | chr8_4:12126719-12126738 | Msa1313850:CDS | 30.0% | |
| !!! | TTGTTTGTGCTGTTTTGTAA+TGG | + | chr8_4:12126789-12126808 | Msa1313850:intron | 30.0% |
| TTGATTCAAAGGATGTTAAG+AGG | + | chr8_4:12126897-12126916 | Msa1313850:CDS | 30.0% | |
| TGATTCAAAGGATGTTAAGA+GGG | + | chr8_4:12126898-12126917 | Msa1313850:CDS | 30.0% | |
| ATGCAAAAACTAGATTGGTA+AGG | + | chr8_4:12127006-12127025 | Msa1313850:intron | 30.0% | |
| !!! | TGTTCCGTTTTGATTGAATT+TGG | + | chr8_4:12127085-12127104 | Msa1313850:intron | 30.0% |
| TGCACCAAATTCAATCAAAA+CGG | - | chr8_4:12127092-12127111 | None:intergenic | 30.0% | |
| ! | GGATAAAGTTTTTGAACTCA+TGG | + | chr8_4:12127186-12127205 | Msa1313850:CDS | 30.0% |
| ACTTGATTTCTCTGTTGAAA+CGG | + | chr8_4:12127469-12127488 | Msa1313850:three_prime_UTR | 30.0% | |
| CAATGCGAAAATAATGTAAC+CGG | - | chr8_4:12127623-12127642 | None:intergenic | 30.0% | |
| ! | GTTACATTATTTTCGCATTG+AGG | + | chr8_4:12127623-12127642 | Msa1313850:three_prime_UTR | 30.0% |
| ! | TTATTGATATGTCGTTTGAC+TGG | - | chr8_4:12127670-12127689 | None:intergenic | 30.0% |
| AAATACTCGAATTTAACCGT+AGG | + | chr8_4:12125798-12125817 | Msa1313850:CDS | 30.0% | |
| !! | GTAGATTTTGACGAAATAGA+TGG | + | chr8_4:12125878-12125897 | Msa1313850:CDS | 30.0% |
| !! | AGATTTTGACGAAATAGATG+GGG | + | chr8_4:12125880-12125899 | Msa1313850:CDS | 30.0% |
| TTGTTTATTATCGAAGATGC+CGG | + | chr8_4:12126005-12126024 | Msa1313850:intron | 30.0% | |
| ! | AAAAAAGAGTGCAAACGAAA+TGG | - | chr8_4:12126262-12126281 | None:intergenic | 30.0% |
| !!! | TCATTTTGATTTTGGCTTCA+AGG | - | chr8_4:12126397-12126416 | None:intergenic | 30.0% |
| GCCAAAATCAAAATGAATCT+CGG | + | chr8_4:12126401-12126420 | Msa1313850:CDS | 30.0% | |
| !!! | ACCGAGATTCATTTTGATTT+TGG | - | chr8_4:12126405-12126424 | None:intergenic | 30.0% |
| AAAGGTTAAGGATTCTAATG+CGG | + | chr8_4:12126719-12126738 | Msa1313850:CDS | 30.0% | |
| !!! | TTGTTTGTGCTGTTTTGTAA+TGG | + | chr8_4:12126789-12126808 | Msa1313850:intron | 30.0% |
| TTGATTCAAAGGATGTTAAG+AGG | + | chr8_4:12126897-12126916 | Msa1313850:CDS | 30.0% | |
| TGATTCAAAGGATGTTAAGA+GGG | + | chr8_4:12126898-12126917 | Msa1313850:CDS | 30.0% | |
| ATGCAAAAACTAGATTGGTA+AGG | + | chr8_4:12127006-12127025 | Msa1313850:intron | 30.0% | |
| !!! | TGTTCCGTTTTGATTGAATT+TGG | + | chr8_4:12127085-12127104 | Msa1313850:intron | 30.0% |
| TGCACCAAATTCAATCAAAA+CGG | - | chr8_4:12127092-12127111 | None:intergenic | 30.0% | |
| ! | GGATAAAGTTTTTGAACTCA+TGG | + | chr8_4:12127186-12127205 | Msa1313850:CDS | 30.0% |
| ACTTGATTTCTCTGTTGAAA+CGG | + | chr8_4:12127469-12127488 | Msa1313850:three_prime_UTR | 30.0% | |
| CAATGCGAAAATAATGTAAC+CGG | - | chr8_4:12127623-12127642 | None:intergenic | 30.0% | |
| ! | GTTACATTATTTTCGCATTG+AGG | + | chr8_4:12127623-12127642 | Msa1313850:three_prime_UTR | 30.0% |
| ! | TTATTGATATGTCGTTTGAC+TGG | - | chr8_4:12127670-12127689 | None:intergenic | 30.0% |
| !! | TCACAAATCTTCTTTGAAGC+AGG | - | chr8_4:12126096-12126115 | None:intergenic | 35.0% |
| AGAAATTCTGACGAAAGTCT+TGG | + | chr8_4:12126134-12126153 | Msa1313850:CDS | 35.0% | |
| AATCAAAGCTTCTTGGGTAA+TGG | - | chr8_4:12126175-12126194 | None:intergenic | 35.0% | |
| GAGTTGAATCAAAGCTTCTT+GGG | - | chr8_4:12126181-12126200 | None:intergenic | 35.0% | |
| AGTTTGTGAATATTGGACTC+TGG | + | chr8_4:12126597-12126616 | Msa1313850:intron | 35.0% | |
| !! | GCAGTTGGTTCTTTTGAATT+TGG | - | chr8_4:12126672-12126691 | None:intergenic | 35.0% |
| TAAAGTTGGGAAAGGGAAAA+AGG | + | chr8_4:12126701-12126720 | Msa1313850:CDS | 35.0% | |
| !!! | TGTGCTGTTTTGTAATGGTT+TGG | + | chr8_4:12126794-12126813 | Msa1313850:intron | 35.0% |
| !! | TGGTTTGGTTCTATAGTTTG+AGG | + | chr8_4:12126809-12126828 | Msa1313850:intron | 35.0% |
| !! | GGTTTGGTTCTATAGTTTGA+GGG | + | chr8_4:12126810-12126829 | Msa1313850:intron | 35.0% |
| !!! | GTTTGAGGGTTTTAGTTGAT+TGG | + | chr8_4:12126824-12126843 | Msa1313850:intron | 35.0% |
| !! | TGATTGGTTTGATTTGTTGC+AGG | + | chr8_4:12126840-12126859 | Msa1313850:intron | 35.0% |
| !! | GATTGGTTTGATTTGTTGCA+GGG | + | chr8_4:12126841-12126860 | Msa1313850:intron | 35.0% |
| GGAAGCTAATCTTGATTCAA+AGG | + | chr8_4:12126886-12126905 | Msa1313850:CDS | 35.0% | |
| GTGTTATGTTTATGTGATGC+TGG | + | chr8_4:12127114-12127133 | Msa1313850:intron | 35.0% | |
| ! | TTTATGTGATGCTGGTCTAA+TGG | + | chr8_4:12127122-12127141 | Msa1313850:intron | 35.0% |
| ! | TTAGGAGAAGAAGCCTTTTT+CGG | + | chr8_4:12127165-12127184 | Msa1313850:intron | 35.0% |
| AGCAGCATTATACAATTCCA+TGG | - | chr8_4:12127227-12127246 | None:intergenic | 35.0% | |
| !!! | TTTGCTCTCTTTTTTGAAGC+TGG | + | chr8_4:12127314-12127333 | Msa1313850:intron | 35.0% |
| GCTATATGTTTGTTCAGGAT+CGG | + | chr8_4:12127338-12127357 | Msa1313850:intron | 35.0% | |
| CTATATGTTTGTTCAGGATC+GGG | + | chr8_4:12127339-12127358 | Msa1313850:intron | 35.0% | |
| TGATTTAGGCTAAAGCTGTA+TGG | + | chr8_4:12127494-12127513 | Msa1313850:three_prime_UTR | 35.0% | |
| GATTTAGGCTAAAGCTGTAT+GGG | + | chr8_4:12127495-12127514 | Msa1313850:three_prime_UTR | 35.0% | |
| ! | TTATTTTCGCATTGAGGACT+TGG | + | chr8_4:12127629-12127648 | Msa1313850:three_prime_UTR | 35.0% |
| !! | TCACAAATCTTCTTTGAAGC+AGG | - | chr8_4:12126096-12126115 | None:intergenic | 35.0% |
| AGAAATTCTGACGAAAGTCT+TGG | + | chr8_4:12126134-12126153 | Msa1313850:CDS | 35.0% | |
| AATCAAAGCTTCTTGGGTAA+TGG | - | chr8_4:12126175-12126194 | None:intergenic | 35.0% | |
| GAGTTGAATCAAAGCTTCTT+GGG | - | chr8_4:12126181-12126200 | None:intergenic | 35.0% | |
| AGTTTGTGAATATTGGACTC+TGG | + | chr8_4:12126597-12126616 | Msa1313850:intron | 35.0% | |
| !! | GCAGTTGGTTCTTTTGAATT+TGG | - | chr8_4:12126672-12126691 | None:intergenic | 35.0% |
| TAAAGTTGGGAAAGGGAAAA+AGG | + | chr8_4:12126701-12126720 | Msa1313850:CDS | 35.0% | |
| !!! | TGTGCTGTTTTGTAATGGTT+TGG | + | chr8_4:12126794-12126813 | Msa1313850:intron | 35.0% |
| !! | TGGTTTGGTTCTATAGTTTG+AGG | + | chr8_4:12126809-12126828 | Msa1313850:intron | 35.0% |
| !! | GGTTTGGTTCTATAGTTTGA+GGG | + | chr8_4:12126810-12126829 | Msa1313850:intron | 35.0% |
| !!! | GTTTGAGGGTTTTAGTTGAT+TGG | + | chr8_4:12126824-12126843 | Msa1313850:intron | 35.0% |
| !! | TGATTGGTTTGATTTGTTGC+AGG | + | chr8_4:12126840-12126859 | Msa1313850:intron | 35.0% |
| !! | GATTGGTTTGATTTGTTGCA+GGG | + | chr8_4:12126841-12126860 | Msa1313850:intron | 35.0% |
| GGAAGCTAATCTTGATTCAA+AGG | + | chr8_4:12126886-12126905 | Msa1313850:CDS | 35.0% | |
| GTGTTATGTTTATGTGATGC+TGG | + | chr8_4:12127114-12127133 | Msa1313850:intron | 35.0% | |
| ! | TTTATGTGATGCTGGTCTAA+TGG | + | chr8_4:12127122-12127141 | Msa1313850:intron | 35.0% |
| ! | TTAGGAGAAGAAGCCTTTTT+CGG | + | chr8_4:12127165-12127184 | Msa1313850:intron | 35.0% |
| AGCAGCATTATACAATTCCA+TGG | - | chr8_4:12127227-12127246 | None:intergenic | 35.0% | |
| !!! | TTTGCTCTCTTTTTTGAAGC+TGG | + | chr8_4:12127314-12127333 | Msa1313850:intron | 35.0% |
| GCTATATGTTTGTTCAGGAT+CGG | + | chr8_4:12127338-12127357 | Msa1313850:intron | 35.0% | |
| CTATATGTTTGTTCAGGATC+GGG | + | chr8_4:12127339-12127358 | Msa1313850:intron | 35.0% | |
| TGATTTAGGCTAAAGCTGTA+TGG | + | chr8_4:12127494-12127513 | Msa1313850:three_prime_UTR | 35.0% | |
| GATTTAGGCTAAAGCTGTAT+GGG | + | chr8_4:12127495-12127514 | Msa1313850:three_prime_UTR | 35.0% | |
| ! | TTATTTTCGCATTGAGGACT+TGG | + | chr8_4:12127629-12127648 | Msa1313850:three_prime_UTR | 35.0% |
| AATGCTCCTTGAAGCAAACA+AGG | + | chr8_4:12125736-12125755 | Msa1313850:CDS | 40.0% | |
| ! | TGTTGACCTTGTTTGCTTCA+AGG | - | chr8_4:12125745-12125764 | None:intergenic | 40.0% |
| TCTTCAGGATCAGCGTTAAT+CGG | - | chr8_4:12125770-12125789 | None:intergenic | 40.0% | |
| GAGATCAGGGAATCTAAATG+TGG | + | chr8_4:12125836-12125855 | Msa1313850:CDS | 40.0% | |
| TGAAATAGAAGATCCTCGAC+AGG | + | chr8_4:12125919-12125938 | Msa1313850:CDS | 40.0% | |
| ! | ATATAAGAGCATACCTGTCG+AGG | - | chr8_4:12125935-12125954 | None:intergenic | 40.0% |
| ! | CGAGTTGAATCAAAGCTTCT+TGG | - | chr8_4:12126182-12126201 | None:intergenic | 40.0% |
| GAAGAGAAGAACGAACCATT+TGG | - | chr8_4:12126235-12126254 | None:intergenic | 40.0% | |
| GGGAAAAAATTTCACCTCTC+GGG | - | chr8_4:12126570-12126589 | None:intergenic | 40.0% | |
| GGGGAAAAAATTTCACCTCT+CGG | - | chr8_4:12126571-12126590 | None:intergenic | 40.0% | |
| CAAAAGAACCAACTGCGAAA+CGG | + | chr8_4:12126676-12126695 | Msa1313850:CDS | 40.0% | |
| !! | AAACGGACTAAAGTTGGGAA+AGG | + | chr8_4:12126693-12126712 | Msa1313850:CDS | 40.0% |
| !! | AACGGACTAAAGTTGGGAAA+GGG | + | chr8_4:12126694-12126713 | Msa1313850:CDS | 40.0% |
| TGGGAAAGGGAAAAAGGTTA+AGG | + | chr8_4:12126707-12126726 | Msa1313850:CDS | 40.0% | |
| GTAAGGAAGATTGCAAGAAG+TGG | + | chr8_4:12127023-12127042 | Msa1313850:CDS | 40.0% | |
| ! | GCTGGTCTAATGGTATGATA+TGG | + | chr8_4:12127132-12127151 | Msa1313850:intron | 40.0% |
| ACTCATGGCAGAATATGAGA+AGG | + | chr8_4:12127201-12127220 | Msa1313850:CDS | 40.0% | |
| !! | CTGGTGCTATATGTTTGTTC+AGG | + | chr8_4:12127333-12127352 | Msa1313850:intron | 40.0% |
| AGTTAACAGATGAGGAGTAG+TGG | + | chr8_4:12127425-12127444 | Msa1313850:CDS | 40.0% | |
| CTGTTGAAACGGCTTGATTT+AGG | + | chr8_4:12127480-12127499 | Msa1313850:three_prime_UTR | 40.0% | |
| ! | ATATCTTTTCGCACTGTCCT+TGG | + | chr8_4:12127584-12127603 | Msa1313850:three_prime_UTR | 40.0% |
| CCTTGGAATATTGCTAATGC+CGG | + | chr8_4:12127601-12127620 | Msa1313850:three_prime_UTR | 40.0% | |
| AATGCTCCTTGAAGCAAACA+AGG | + | chr8_4:12125736-12125755 | Msa1313850:CDS | 40.0% | |
| ! | TGTTGACCTTGTTTGCTTCA+AGG | - | chr8_4:12125745-12125764 | None:intergenic | 40.0% |
| TCTTCAGGATCAGCGTTAAT+CGG | - | chr8_4:12125770-12125789 | None:intergenic | 40.0% | |
| GAGATCAGGGAATCTAAATG+TGG | + | chr8_4:12125836-12125855 | Msa1313850:CDS | 40.0% | |
| TGAAATAGAAGATCCTCGAC+AGG | + | chr8_4:12125919-12125938 | Msa1313850:CDS | 40.0% | |
| ! | ATATAAGAGCATACCTGTCG+AGG | - | chr8_4:12125935-12125954 | None:intergenic | 40.0% |
| ! | CGAGTTGAATCAAAGCTTCT+TGG | - | chr8_4:12126182-12126201 | None:intergenic | 40.0% |
| GAAGAGAAGAACGAACCATT+TGG | - | chr8_4:12126235-12126254 | None:intergenic | 40.0% | |
| GGGAAAAAATTTCACCTCTC+GGG | - | chr8_4:12126570-12126589 | None:intergenic | 40.0% | |
| GGGGAAAAAATTTCACCTCT+CGG | - | chr8_4:12126571-12126590 | None:intergenic | 40.0% | |
| CAAAAGAACCAACTGCGAAA+CGG | + | chr8_4:12126676-12126695 | Msa1313850:CDS | 40.0% | |
| !! | AAACGGACTAAAGTTGGGAA+AGG | + | chr8_4:12126693-12126712 | Msa1313850:CDS | 40.0% |
| !! | AACGGACTAAAGTTGGGAAA+GGG | + | chr8_4:12126694-12126713 | Msa1313850:CDS | 40.0% |
| TGGGAAAGGGAAAAAGGTTA+AGG | + | chr8_4:12126707-12126726 | Msa1313850:CDS | 40.0% | |
| GTAAGGAAGATTGCAAGAAG+TGG | + | chr8_4:12127023-12127042 | Msa1313850:CDS | 40.0% | |
| ! | GCTGGTCTAATGGTATGATA+TGG | + | chr8_4:12127132-12127151 | Msa1313850:intron | 40.0% |
| ACTCATGGCAGAATATGAGA+AGG | + | chr8_4:12127201-12127220 | Msa1313850:CDS | 40.0% | |
| !! | CTGGTGCTATATGTTTGTTC+AGG | + | chr8_4:12127333-12127352 | Msa1313850:intron | 40.0% |
| AGTTAACAGATGAGGAGTAG+TGG | + | chr8_4:12127425-12127444 | Msa1313850:CDS | 40.0% | |
| CTGTTGAAACGGCTTGATTT+AGG | + | chr8_4:12127480-12127499 | Msa1313850:three_prime_UTR | 40.0% | |
| ! | ATATCTTTTCGCACTGTCCT+TGG | + | chr8_4:12127584-12127603 | Msa1313850:three_prime_UTR | 40.0% |
| CCTTGGAATATTGCTAATGC+CGG | + | chr8_4:12127601-12127620 | Msa1313850:three_prime_UTR | 40.0% | |
| AGCCAGACTACACAAAACTC+TGG | + | chr8_4:12125705-12125724 | Msa1313850:CDS | 45.0% | |
| !! | GTCCAGAGTTTTGTGTAGTC+TGG | - | chr8_4:12125710-12125729 | None:intergenic | 45.0% |
| TGTGATGCGCATCATGTTGA+TGG | + | chr8_4:12126111-12126130 | Msa1313850:CDS | 45.0% | |
| CTCGCAAAATGTGCCAAAGA+TGG | + | chr8_4:12126198-12126217 | Msa1313850:CDS | 45.0% | |
| ACTTTAGTCCGTTTCGCAGT+TGG | - | chr8_4:12126687-12126706 | None:intergenic | 45.0% | |
| !! | ACTGCGAAACGGACTAAAGT+TGG | + | chr8_4:12126687-12126706 | Msa1313850:CDS | 45.0% |
| !! | CTGCGAAACGGACTAAAGTT+GGG | + | chr8_4:12126688-12126707 | Msa1313850:CDS | 45.0% |
| AGGAAGATTGCAAGAAGTGG+AGG | + | chr8_4:12127026-12127045 | Msa1313850:CDS | 45.0% | |
| TATGTTTGTTCAGGATCGGG+AGG | + | chr8_4:12127342-12127361 | Msa1313850:intron | 45.0% | |
| GGAAGGCCAATCTGATGATA+AGG | + | chr8_4:12127375-12127394 | Msa1313850:CDS | 45.0% | |
| GGGCTTCCTTATCATCAGAT+TGG | - | chr8_4:12127384-12127403 | None:intergenic | 45.0% | |
| ! | GAGGAGTAGTGGTAGCATTT+TGG | + | chr8_4:12127436-12127455 | Msa1313850:exon | 45.0% |
| AGGCTAAAGCTGTATGGGTT+TGG | + | chr8_4:12127500-12127519 | Msa1313850:three_prime_UTR | 45.0% | |
| CCGGCATTAGCAATATTCCA+AGG | - | chr8_4:12127604-12127623 | None:intergenic | 45.0% | |
| AGCCAGACTACACAAAACTC+TGG | + | chr8_4:12125705-12125724 | Msa1313850:CDS | 45.0% | |
| !! | GTCCAGAGTTTTGTGTAGTC+TGG | - | chr8_4:12125710-12125729 | None:intergenic | 45.0% |
| TGTGATGCGCATCATGTTGA+TGG | + | chr8_4:12126111-12126130 | Msa1313850:CDS | 45.0% | |
| CTCGCAAAATGTGCCAAAGA+TGG | + | chr8_4:12126198-12126217 | Msa1313850:CDS | 45.0% | |
| ACTTTAGTCCGTTTCGCAGT+TGG | - | chr8_4:12126687-12126706 | None:intergenic | 45.0% | |
| !! | ACTGCGAAACGGACTAAAGT+TGG | + | chr8_4:12126687-12126706 | Msa1313850:CDS | 45.0% |
| !! | CTGCGAAACGGACTAAAGTT+GGG | + | chr8_4:12126688-12126707 | Msa1313850:CDS | 45.0% |
| AGGAAGATTGCAAGAAGTGG+AGG | + | chr8_4:12127026-12127045 | Msa1313850:CDS | 45.0% | |
| TATGTTTGTTCAGGATCGGG+AGG | + | chr8_4:12127342-12127361 | Msa1313850:intron | 45.0% | |
| GGAAGGCCAATCTGATGATA+AGG | + | chr8_4:12127375-12127394 | Msa1313850:CDS | 45.0% | |
| GGGCTTCCTTATCATCAGAT+TGG | - | chr8_4:12127384-12127403 | None:intergenic | 45.0% | |
| ! | GAGGAGTAGTGGTAGCATTT+TGG | + | chr8_4:12127436-12127455 | Msa1313850:exon | 45.0% |
| AGGCTAAAGCTGTATGGGTT+TGG | + | chr8_4:12127500-12127519 | Msa1313850:three_prime_UTR | 45.0% | |
| CCGGCATTAGCAATATTCCA+AGG | - | chr8_4:12127604-12127623 | None:intergenic | 45.0% | |
| !!! | TTTAAGTTTATTTATTTTTT+TGG | + | chr8_4:12126632-12126651 | Msa1313850:intron | 5.0% |
| !!! | TTTAAGTTTATTTATTTTTT+TGG | + | chr8_4:12126632-12126651 | Msa1313850:intron | 5.0% |
| TAACCGTAGGTTTGCAGACG+AGG | + | chr8_4:12125811-12125830 | Msa1313850:CDS | 50.0% | |
| ATGGCAGTGCTTTCGCCAAA+TGG | + | chr8_4:12126217-12126236 | Msa1313850:CDS | 50.0% | |
| GAAGTGGAGGTCTTTGACTG+AGG | + | chr8_4:12127039-12127058 | Msa1313850:CDS | 50.0% | |
| GGCAGAATATGAGAAGGCCA+TGG | + | chr8_4:12127207-12127226 | Msa1313850:CDS | 50.0% | |
| GGATCGGGAGGAATCTGATA+AGG | + | chr8_4:12127354-12127373 | Msa1313850:intron | 50.0% | |
| CGGGAGGAATCTGATAAGGA+AGG | + | chr8_4:12127358-12127377 | Msa1313850:CDS | 50.0% | |
| GGCGGAAGAGTTAACAGATG+AGG | + | chr8_4:12127417-12127436 | Msa1313850:CDS | 50.0% | |
| TAACCGTAGGTTTGCAGACG+AGG | + | chr8_4:12125811-12125830 | Msa1313850:CDS | 50.0% | |
| ATGGCAGTGCTTTCGCCAAA+TGG | + | chr8_4:12126217-12126236 | Msa1313850:CDS | 50.0% | |
| GAAGTGGAGGTCTTTGACTG+AGG | + | chr8_4:12127039-12127058 | Msa1313850:CDS | 50.0% | |
| GGCAGAATATGAGAAGGCCA+TGG | + | chr8_4:12127207-12127226 | Msa1313850:CDS | 50.0% | |
| GGATCGGGAGGAATCTGATA+AGG | + | chr8_4:12127354-12127373 | Msa1313850:intron | 50.0% | |
| CGGGAGGAATCTGATAAGGA+AGG | + | chr8_4:12127358-12127377 | Msa1313850:CDS | 50.0% | |
| GGCGGAAGAGTTAACAGATG+AGG | + | chr8_4:12127417-12127436 | Msa1313850:CDS | 50.0% | |
| CCTCCTCGTCTGCAAACCTA+CGG | - | chr8_4:12125817-12125836 | None:intergenic | 55.0% | |
| TTGCAGACGAGGAGGAGATC+AGG | + | chr8_4:12125822-12125841 | Msa1313850:CDS | 55.0% | |
| TGCAGACGAGGAGGAGATCA+GGG | + | chr8_4:12125823-12125842 | Msa1313850:CDS | 55.0% | |
| AGCCTCCTGCTGCTGTTCAA+GGG | - | chr8_4:12126034-12126053 | None:intergenic | 55.0% | |
| AAGCCTCCTGCTGCTGTTCA+AGG | - | chr8_4:12126035-12126054 | None:intergenic | 55.0% | |
| !! | GGCGAAAGCACTGCCATCTT+TGG | - | chr8_4:12126214-12126233 | None:intergenic | 55.0% |
| GCTGAAGTGAGAAACCCGAG+AGG | + | chr8_4:12126553-12126572 | Msa1313850:intron | 55.0% | |
| GTTAACTCTTCCGCCTCTCC+TGG | - | chr8_4:12127412-12127431 | None:intergenic | 55.0% | |
| CCTCCTCGTCTGCAAACCTA+CGG | - | chr8_4:12125817-12125836 | None:intergenic | 55.0% | |
| TTGCAGACGAGGAGGAGATC+AGG | + | chr8_4:12125822-12125841 | Msa1313850:CDS | 55.0% | |
| TGCAGACGAGGAGGAGATCA+GGG | + | chr8_4:12125823-12125842 | Msa1313850:CDS | 55.0% | |
| AGCCTCCTGCTGCTGTTCAA+GGG | - | chr8_4:12126034-12126053 | None:intergenic | 55.0% | |
| AAGCCTCCTGCTGCTGTTCA+AGG | - | chr8_4:12126035-12126054 | None:intergenic | 55.0% | |
| !! | GGCGAAAGCACTGCCATCTT+TGG | - | chr8_4:12126214-12126233 | None:intergenic | 55.0% |
| GCTGAAGTGAGAAACCCGAG+AGG | + | chr8_4:12126553-12126572 | Msa1313850:intron | 55.0% | |
| GTTAACTCTTCCGCCTCTCC+TGG | - | chr8_4:12127412-12127431 | None:intergenic | 55.0% | |
| CCGTAGGTTTGCAGACGAGG+AGG | + | chr8_4:12125814-12125833 | Msa1313850:CDS | 60.0% | |
| CTCCTGCTGCTGTTCAAGGG+GGG | - | chr8_4:12126031-12126050 | None:intergenic | 60.0% | |
| CCTCCTGCTGCTGTTCAAGG+GGG | - | chr8_4:12126032-12126051 | None:intergenic | 60.0% | |
| GCCTCCTGCTGCTGTTCAAG+GGG | - | chr8_4:12126033-12126052 | None:intergenic | 60.0% | |
| GATAAGGAAGCCCCTGCACC+AGG | + | chr8_4:12127391-12127410 | Msa1313850:CDS | 60.0% | |
| CCGTAGGTTTGCAGACGAGG+AGG | + | chr8_4:12125814-12125833 | Msa1313850:CDS | 60.0% | |
| CTCCTGCTGCTGTTCAAGGG+GGG | - | chr8_4:12126031-12126050 | None:intergenic | 60.0% | |
| CCTCCTGCTGCTGTTCAAGG+GGG | - | chr8_4:12126032-12126051 | None:intergenic | 60.0% | |
| GCCTCCTGCTGCTGTTCAAG+GGG | - | chr8_4:12126033-12126052 | None:intergenic | 60.0% | |
| GATAAGGAAGCCCCTGCACC+AGG | + | chr8_4:12127391-12127410 | Msa1313850:CDS | 60.0% | |
| TGCTGCTGTTCAAGGGGGGC+CGG | - | chr8_4:12126027-12126046 | None:intergenic | 65.0% | |
| CCCCCTTGAACAGCAGCAGG+AGG | + | chr8_4:12126029-12126048 | Msa1313850:intron | 65.0% | |
| TTCCGCCTCTCCTGGTGCAG+GGG | - | chr8_4:12127404-12127423 | None:intergenic | 65.0% | |
| CTTCCGCCTCTCCTGGTGCA+GGG | - | chr8_4:12127405-12127424 | None:intergenic | 65.0% | |
| TCTTCCGCCTCTCCTGGTGC+AGG | - | chr8_4:12127406-12127425 | None:intergenic | 65.0% | |
| TGCTGCTGTTCAAGGGGGGC+CGG | - | chr8_4:12126027-12126046 | None:intergenic | 65.0% | |
| CCCCCTTGAACAGCAGCAGG+AGG | + | chr8_4:12126029-12126048 | Msa1313850:intron | 65.0% | |
| TTCCGCCTCTCCTGGTGCAG+GGG | - | chr8_4:12127404-12127423 | None:intergenic | 65.0% | |
| CTTCCGCCTCTCCTGGTGCA+GGG | - | chr8_4:12127405-12127424 | None:intergenic | 65.0% | |
| TCTTCCGCCTCTCCTGGTGC+AGG | - | chr8_4:12127406-12127425 | None:intergenic | 65.0% | |
| GGCCCCCCTTGAACAGCAGC+AGG | + | chr8_4:12126026-12126045 | Msa1313850:intron | 70.0% | |
| GGAAGCCCCTGCACCAGGAG+AGG | + | chr8_4:12127396-12127415 | Msa1313850:CDS | 70.0% | |
| AGCCCCTGCACCAGGAGAGG+CGG | + | chr8_4:12127399-12127418 | Msa1313850:CDS | 70.0% | |
| GGCCCCCCTTGAACAGCAGC+AGG | + | chr8_4:12126026-12126045 | Msa1313850:intron | 70.0% | |
| GGAAGCCCCTGCACCAGGAG+AGG | + | chr8_4:12127396-12127415 | Msa1313850:CDS | 70.0% | |
| AGCCCCTGCACCAGGAGAGG+CGG | + | chr8_4:12127399-12127418 | Msa1313850:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 12125692 | 12127702 | 12125692 | ID=Msa1313850;Name=Msa1313850 |
| chr8_4 | mRNA | 12125692 | 12127702 | 12125692 | ID=Msa1313850-mRNA-1;Parent=Msa1313850;Name=Msa1313850-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.25|0.22|1|0.62|0.77|9|258|293 |
| chr8_4 | exon | 12125692 | 12125940 | 12125692 | ID=Msa1313850-mRNA-1:exon:4537;Parent=Msa1313850-mRNA-1 |
| chr8_4 | exon | 12126090 | 12126238 | 12126090 | ID=Msa1313850-mRNA-1:exon:4538;Parent=Msa1313850-mRNA-1 |
| chr8_4 | exon | 12126361 | 12126422 | 12126361 | ID=Msa1313850-mRNA-1:exon:4539;Parent=Msa1313850-mRNA-1 |
| chr8_4 | exon | 12126530 | 12126558 | 12126530 | ID=Msa1313850-mRNA-1:exon:4540;Parent=Msa1313850-mRNA-1 |
| chr8_4 | exon | 12126669 | 12126775 | 12126669 | ID=Msa1313850-mRNA-1:exon:4541;Parent=Msa1313850-mRNA-1 |
| chr8_4 | exon | 12126862 | 12126919 | 12126862 | ID=Msa1313850-mRNA-1:exon:4542;Parent=Msa1313850-mRNA-1 |
| chr8_4 | exon | 12127019 | 12127063 | 12127019 | ID=Msa1313850-mRNA-1:exon:4543;Parent=Msa1313850-mRNA-1 |
| chr8_4 | exon | 12127169 | 12127261 | 12127169 | ID=Msa1313850-mRNA-1:exon:4544;Parent=Msa1313850-mRNA-1 |
| chr8_4 | exon | 12127355 | 12127702 | 12127355 | ID=Msa1313850-mRNA-1:exon:4545;Parent=Msa1313850-mRNA-1 |
| chr8_4 | CDS | 12125692 | 12125940 | 12125692 | ID=Msa1313850-mRNA-1:cds;Parent=Msa1313850-mRNA-1 |
| chr8_4 | CDS | 12126090 | 12126238 | 12126090 | ID=Msa1313850-mRNA-1:cds;Parent=Msa1313850-mRNA-1 |
| chr8_4 | CDS | 12126361 | 12126422 | 12126361 | ID=Msa1313850-mRNA-1:cds;Parent=Msa1313850-mRNA-1 |
| chr8_4 | CDS | 12126530 | 12126558 | 12126530 | ID=Msa1313850-mRNA-1:cds;Parent=Msa1313850-mRNA-1 |
| chr8_4 | CDS | 12126669 | 12126775 | 12126669 | ID=Msa1313850-mRNA-1:cds;Parent=Msa1313850-mRNA-1 |
| chr8_4 | CDS | 12126862 | 12126919 | 12126862 | ID=Msa1313850-mRNA-1:cds;Parent=Msa1313850-mRNA-1 |
| chr8_4 | CDS | 12127019 | 12127063 | 12127019 | ID=Msa1313850-mRNA-1:cds;Parent=Msa1313850-mRNA-1 |
| chr8_4 | CDS | 12127169 | 12127261 | 12127169 | ID=Msa1313850-mRNA-1:cds;Parent=Msa1313850-mRNA-1 |
| chr8_4 | CDS | 12127355 | 12127444 | 12127355 | ID=Msa1313850-mRNA-1:cds;Parent=Msa1313850-mRNA-1 |
| chr8_4 | three_prime_UTR | 12127445 | 12127702 | 12127445 | ID=Msa1313850-mRNA-1:three_prime_utr;Parent=Msa1313850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
