Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313880 | AET01618.1 | 87.645 | 259 | 18 | 3 | 1 | 258 | 1 | 246 | 4.02e-155 | 445 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313880 | sp|Q8LDF9|HMGB7_ARATH | 47.020 | 151 | 63 | 5 | 147 | 283 | 32 | 179 | 9.26e-27 | 108 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313880 | G7LI68 | 87.645 | 259 | 18 | 3 | 1 | 258 | 1 | 246 | 1.92e-155 | 445 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1313880 | TR | HMG |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313880 | MtrunA17_Chr8g0342651 | 80.695 | 259 | 16 | 3 | 1 | 258 | 1 | 226 | 1.96e-142 | 402 |
| Msa1313880 | MtrunA17_Chr1g0212341 | 80.978 | 184 | 24 | 3 | 147 | 319 | 23 | 206 | 5.78e-87 | 260 |
| Msa1313880 | MtrunA17_Chr3g0143991 | 52.809 | 89 | 42 | 0 | 205 | 293 | 32 | 120 | 6.23e-22 | 90.5 |
| Msa1313880 | MtrunA17_Chr5g0438531 | 38.596 | 171 | 77 | 4 | 11 | 167 | 4 | 160 | 8.80e-21 | 87.8 |
| Msa1313880 | MtrunA17_Chr5g0407011 | 44.860 | 107 | 53 | 2 | 201 | 301 | 15 | 121 | 8.27e-20 | 84.3 |
| Msa1313880 | MtrunA17_Chr7g0242251 | 52.703 | 74 | 35 | 0 | 214 | 287 | 47 | 120 | 9.13e-18 | 79.7 |
| Msa1313880 | MtrunA17_Chr8g0370431 | 39.623 | 106 | 59 | 1 | 201 | 301 | 15 | 120 | 2.24e-17 | 77.8 |
| Msa1313880 | MtrunA17_Chr4g0052011 | 37.037 | 108 | 66 | 1 | 180 | 287 | 28 | 133 | 1.51e-13 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313880 | AT5G23420.1 | 47.020 | 151 | 63 | 5 | 147 | 283 | 32 | 179 | 9.42e-28 | 108 |
| Msa1313880 | AT4G35570.1 | 45.652 | 92 | 50 | 0 | 209 | 300 | 25 | 116 | 1.76e-19 | 83.6 |
| Msa1313880 | AT4G35570.2 | 45.652 | 92 | 50 | 0 | 209 | 300 | 25 | 116 | 1.76e-19 | 83.6 |
| Msa1313880 | AT3G51880.2 | 41.600 | 125 | 70 | 2 | 192 | 316 | 28 | 149 | 1.44e-18 | 82.8 |
| Msa1313880 | AT3G51880.4 | 43.810 | 105 | 58 | 1 | 192 | 296 | 28 | 131 | 2.93e-18 | 81.3 |
| Msa1313880 | AT3G51880.5 | 38.462 | 130 | 79 | 1 | 167 | 296 | 3 | 131 | 4.04e-18 | 81.3 |
| Msa1313880 | AT3G51880.1 | 38.462 | 130 | 79 | 1 | 167 | 296 | 3 | 131 | 4.04e-18 | 81.3 |
| Msa1313880 | AT3G51880.3 | 38.462 | 130 | 79 | 1 | 167 | 296 | 3 | 131 | 4.04e-18 | 81.3 |
| Msa1313880 | AT1G20696.1 | 48.077 | 104 | 50 | 3 | 200 | 301 | 18 | 119 | 9.22e-17 | 76.6 |
| Msa1313880 | AT1G20693.3 | 46.465 | 99 | 49 | 3 | 206 | 301 | 25 | 122 | 1.99e-16 | 75.5 |
| Msa1313880 | AT1G20693.1 | 46.465 | 99 | 49 | 3 | 206 | 301 | 25 | 122 | 2.04e-16 | 75.5 |
| Msa1313880 | AT1G20696.5 | 48.864 | 88 | 44 | 1 | 200 | 287 | 18 | 104 | 3.03e-16 | 74.7 |
| Msa1313880 | AT1G20693.2 | 46.465 | 99 | 49 | 3 | 206 | 301 | 25 | 122 | 3.55e-16 | 75.1 |
| Msa1313880 | AT1G20696.2 | 48.864 | 88 | 44 | 1 | 200 | 287 | 18 | 104 | 8.31e-16 | 73.9 |
| Msa1313880 | AT2G17560.3 | 42.708 | 96 | 52 | 2 | 209 | 301 | 25 | 120 | 8.90e-16 | 73.6 |
| Msa1313880 | AT2G17560.2 | 42.708 | 96 | 52 | 2 | 209 | 301 | 25 | 120 | 9.71e-16 | 73.6 |
| Msa1313880 | AT2G17560.1 | 42.708 | 96 | 52 | 2 | 209 | 301 | 25 | 120 | 9.71e-16 | 73.6 |
| Msa1313880 | AT2G34450.4 | 38.824 | 85 | 49 | 1 | 219 | 300 | 64 | 148 | 1.50e-11 | 62.4 |
| Msa1313880 | AT2G34450.3 | 38.824 | 85 | 49 | 1 | 219 | 300 | 64 | 148 | 1.50e-11 | 62.4 |
| Msa1313880 | AT2G34450.1 | 38.824 | 85 | 49 | 1 | 219 | 300 | 64 | 148 | 1.50e-11 | 62.4 |
Find 77 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATGTCTTAGTTATATTT+AGG | 0.203685 | 8_4:+12139215 | Msa1313880:three_prime_UTR |
| CTATTGAAACGGCTTGATTT+AGG | 0.260653 | 8_4:+12139173 | Msa1313880:exon |
| GGCGAAAGCACTGCCATCTT+TGG | 0.263194 | 8_4:-12137910 | None:intergenic |
| CGAGTTGAATCAAAGCTTCT+TGG | 0.289462 | 8_4:-12137878 | None:intergenic |
| GAGGAGTAGTGGTAGCATTT+TGG | 0.290072 | 8_4:+12139129 | Msa1313880:CDS |
| AAGCCTCCTGCTGCTGTTCA+AGG | 0.291500 | 8_4:-12137731 | None:intergenic |
| TCATAAACTTTATCCCAAAA+AGG | 0.297956 | 8_4:-12138872 | None:intergenic |
| TAGGCTAAAGCTGTATAGTT+TGG | 0.319936 | 8_4:+12139192 | Msa1313880:three_prime_UTR |
| TTGCAGACGAGGAGGAGATC+AGG | 0.340582 | 8_4:+12137521 | Msa1313880:CDS |
| ACATGTCTTAGTTATATTTA+GGG | 0.343830 | 8_4:+12139216 | Msa1313880:three_prime_UTR |
| TAAAGTTGGGAAAGGGAAAA+AGG | 0.356731 | 8_4:+12138395 | Msa1313880:CDS |
| TGTTGACCTTGTTTGCTTCA+AGG | 0.365012 | 8_4:-12137441 | None:intergenic |
| TGTGATGCGCATCATGTTGA+TGG | 0.383923 | 8_4:+12137810 | Msa1313880:CDS |
| TCTTCAGGATCAGCGTTAAT+CGG | 0.386915 | 8_4:-12137466 | None:intergenic |
| AATCAAAGCTTCTTGGGTAA+TGG | 0.393707 | 8_4:-12137871 | None:intergenic |
| TTATTTGCGCATTGAGGACT+TGG | 0.410531 | 8_4:+12139319 | Msa1313880:three_prime_UTR |
| AGCCTCCTGCTGCTGTTCAA+GGG | 0.417728 | 8_4:-12137730 | None:intergenic |
| TCATTGATGTGTCGTTTGAT+TGG | 0.419969 | 8_4:-12139357 | None:intergenic |
| TTGATTCAAAGGATGTTAAG+AGG | 0.429062 | 8_4:+12138591 | Msa1313880:CDS |
| AAAAGAACCAACTGTGAAAC+GGG | 0.433899 | 8_4:+12138371 | Msa1313880:CDS |
| CTTCGACCTCTCCTGGTGTA+GGG | 0.444977 | 8_4:-12139096 | None:intergenic |
| CAATGCGCAAATAATGTAAC+CGG | 0.452766 | 8_4:-12139310 | None:intergenic |
| GCCTCCTGCTGCTGTTCAAG+GGG | 0.455833 | 8_4:-12137729 | None:intergenic |
| ATGGCAGTGCTTTCGCCAAA+TGG | 0.458037 | 8_4:+12137916 | Msa1313880:CDS |
| ACTTGATTTCTCTATTGAAA+CGG | 0.459716 | 8_4:+12139162 | Msa1313880:CDS |
| GGAAGGCCAATCTGATGATA+AGG | 0.467371 | 8_4:+12139069 | Msa1313880:CDS |
| GGAAGCTAATCTTGATTCAA+AGG | 0.468919 | 8_4:+12138580 | Msa1313880:CDS |
| TCACAAATCTTCTTTGAAGC+AGG | 0.469888 | 8_4:-12137792 | None:intergenic |
| TGTAACTCTTCGACCTCTCC+TGG | 0.473741 | 8_4:-12139103 | None:intergenic |
| TCTTCGACCTCTCCTGGTGT+AGG | 0.479230 | 8_4:-12139097 | None:intergenic |
| GGGCTTCCTTATCATCAGAT+TGG | 0.482008 | 8_4:-12139075 | None:intergenic |
| CAAAAGAACCAACTGTGAAA+CGG | 0.482796 | 8_4:+12138370 | Msa1313880:CDS |
| GGATCAAGAGGGATCTGATA+AGG | 0.494440 | 8_4:+12139048 | Msa1313880:intron |
| CTGTGAAACGGGCTAAAGTT+GGG | 0.495371 | 8_4:+12138382 | Msa1313880:CDS |
| ACTGTGAAACGGGCTAAAGT+TGG | 0.495403 | 8_4:+12138381 | Msa1313880:CDS |
| CTCGCAAAATGTGCCAAAGA+TGG | 0.495720 | 8_4:+12137897 | Msa1313880:CDS |
| GCCAAAATCAAAATGAATCT+CGG | 0.501868 | 8_4:+12138100 | Msa1313880:CDS |
| AACTAGGTTGGTAAGGAAGA+TGG | 0.502121 | 8_4:+12138707 | Msa1313880:intron |
| GAGTTGAATCAAAGCTTCTT+GGG | 0.504888 | 8_4:-12137877 | None:intergenic |
| AGAAATTCTGACGAAAGTCT+TGG | 0.505562 | 8_4:+12137833 | Msa1313880:CDS |
| ACTTTAGCCCGTTTCACAGT+TGG | 0.507638 | 8_4:-12138378 | None:intergenic |
| GTTACATTATTTGCGCATTG+AGG | 0.519940 | 8_4:+12139313 | Msa1313880:three_prime_UTR |
| TAACCGTAGGTTTGCAGACG+AGG | 0.521173 | 8_4:+12137510 | Msa1313880:CDS |
| GGATAAAGTTTATGAACTCA+TGG | 0.536760 | 8_4:+12138880 | Msa1313880:CDS |
| AGGAAGATGGTGAGAAGTGG+AGG | 0.540030 | 8_4:+12138720 | Msa1313880:CDS |
| CCTTGGAATATTGCTAATGC+CGG | 0.549723 | 8_4:+12139291 | Msa1313880:three_prime_UTR |
| ATGAAAACAAAGAAATCAGT+TGG | 0.551566 | 8_4:-12138447 | None:intergenic |
| CCTCCTGCTGCTGTTCAAGG+GGG | 0.558467 | 8_4:-12137728 | None:intergenic |
| GAGTTACAGATGAGGAGTAG+TGG | 0.559634 | 8_4:+12139118 | Msa1313880:CDS |
| TGCAGACGAGGAGGAGATCA+GGG | 0.567878 | 8_4:+12137522 | Msa1313880:CDS |
| TGAAATAGAAGATCCTCGAC+AGG | 0.569010 | 8_4:+12137618 | Msa1313880:CDS |
| GATAAGGAAGCCCCTACACC+AGG | 0.573340 | 8_4:+12139085 | Msa1313880:CDS |
| GAAGTGGAGGTCTTTGACTG+AGG | 0.573915 | 8_4:+12138733 | Msa1313880:CDS |
| AGCAGTATTATACAATTCCA+TGG | 0.577022 | 8_4:-12138918 | None:intergenic |
| TTCGACCTCTCCTGGTGTAG+GGG | 0.580908 | 8_4:-12139095 | None:intergenic |
| AAACGGGCTAAAGTTGGGAA+AGG | 0.581260 | 8_4:+12138387 | Msa1313880:CDS |
| GTAAGGAAGATGGTGAGAAG+TGG | 0.583888 | 8_4:+12138717 | Msa1313880:CDS |
| TGATTCAAAGGATGTTAAGA+GGG | 0.586389 | 8_4:+12138592 | Msa1313880:CDS |
| TATGTTTGTTCAGGATCAAG+AGG | 0.598280 | 8_4:+12139036 | Msa1313880:intron |
| CCTCCTCGTCTGCAAACCTA+CGG | 0.601229 | 8_4:-12137513 | None:intergenic |
| ATATAAGAGCATACCTGTCG+AGG | 0.602504 | 8_4:-12137631 | None:intergenic |
| CTCCTGCTGCTGTTCAAGGG+GGG | 0.607441 | 8_4:-12137727 | None:intergenic |
| AATGCTCCTTGAAGCAAACA+AGG | 0.617773 | 8_4:+12137435 | Msa1313880:CDS |
| CAAGAGGGATCTGATAAGGA+AGG | 0.618030 | 8_4:+12139052 | Msa1313880:CDS |
| AACGGGCTAAAGTTGGGAAA+GGG | 0.618034 | 8_4:+12138388 | Msa1313880:CDS |
| AAATACTCGAATTTAACCGT+AGG | 0.618437 | 8_4:+12137497 | Msa1313880:CDS |
| GGCAGAATATGAGAAGGCCA+TGG | 0.621119 | 8_4:+12138901 | Msa1313880:CDS |
| ATGTTTGTTCAGGATCAAGA+GGG | 0.630457 | 8_4:+12139037 | Msa1313880:intron |
| AGCCAGACTACACAAAACTC+TGG | 0.634663 | 8_4:+12137404 | Msa1313880:CDS |
| GGAAGCCCCTACACCAGGAG+AGG | 0.635398 | 8_4:+12139090 | Msa1313880:CDS |
| AGGTCGAAGAGTTACAGATG+AGG | 0.646737 | 8_4:+12139110 | Msa1313880:CDS |
| CCGGCATTAGCAATATTCCA+AGG | 0.658115 | 8_4:-12139291 | None:intergenic |
| CCGTAGGTTTGCAGACGAGG+AGG | 0.664679 | 8_4:+12137513 | Msa1313880:CDS |
| ACTCATGGCAGAATATGAGA+AGG | 0.674706 | 8_4:+12138895 | Msa1313880:CDS |
| GAGATCAGGGAATCTAAATG+TGG | 0.675178 | 8_4:+12137535 | Msa1313880:CDS |
| AAAGGTTAAGGATTCTAATG+CGG | 0.688426 | 8_4:+12138413 | Msa1313880:CDS |
| CTGAAGTGAAGAAACCCGAG+AGG | 0.719762 | 8_4:+12138253 | Msa1313880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGATAATAATTACTAATTA+GGG | - | chr8_4:12138149-12138168 | None:intergenic | 10.0% |
| !!! | TTTGATAATAATTACTAATT+AGG | - | chr8_4:12138150-12138169 | None:intergenic | 10.0% |
| !!! | GTATTTGATTTTATTTAATT+TGG | + | chr8_4:12138198-12138217 | Msa1313880:intron | 10.0% |
| !!! | TTGATAATAATTACTAATTA+GGG | - | chr8_4:12138149-12138168 | None:intergenic | 10.0% |
| !!! | TTTGATAATAATTACTAATT+AGG | - | chr8_4:12138150-12138169 | None:intergenic | 10.0% |
| !!! | GTATTTGATTTTATTTAATT+TGG | + | chr8_4:12138198-12138217 | Msa1313880:intron | 10.0% |
| !! | AATATTCACAAACTAAAATT+GGG | - | chr8_4:12138291-12138310 | None:intergenic | 15.0% |
| !!! | TTATTTTTTTGGAATTTTGT+AGG | + | chr8_4:12138337-12138356 | Msa1313880:intron | 15.0% |
| !! | TAATATGGTTAAAATTGTTT+AGG | + | chr8_4:12138841-12138860 | Msa1313880:intron | 15.0% |
| !! | AATATTCACAAACTAAAATT+GGG | - | chr8_4:12138291-12138310 | None:intergenic | 15.0% |
| !!! | TTATTTTTTTGGAATTTTGT+AGG | + | chr8_4:12138337-12138356 | Msa1313880:intron | 15.0% |
| !! | TAATATGGTTAAAATTGTTT+AGG | + | chr8_4:12138841-12138860 | Msa1313880:intron | 15.0% |
| !! | ATATTCACAAACTAAAATTG+GGG | - | chr8_4:12138290-12138309 | None:intergenic | 20.0% |
| !! | CAATATTCACAAACTAAAAT+TGG | - | chr8_4:12138292-12138311 | None:intergenic | 20.0% |
| !!! | CAATTTTAGTTTGTGAATAT+TGG | + | chr8_4:12138290-12138309 | Msa1313880:intron | 20.0% |
| !!! | ATTTCTTTGTTTTCATGTAA+GGG | + | chr8_4:12138454-12138473 | Msa1313880:intron | 20.0% |
| !! | TTGTTTGATTAACTTATCTA+AGG | + | chr8_4:12138651-12138670 | Msa1313880:intron | 20.0% |
| !!! | AAATGAAGTATGTTTTCTTT+TGG | + | chr8_4:12138949-12138968 | Msa1313880:intron | 20.0% |
| !!! | AATGAAGTATGTTTTCTTTT+GGG | + | chr8_4:12138950-12138969 | Msa1313880:intron | 20.0% |
| !! | AACATGTCTTAGTTATATTT+AGG | + | chr8_4:12139215-12139234 | Msa1313880:three_prime_UTR | 20.0% |
| !! | ACATGTCTTAGTTATATTTA+GGG | + | chr8_4:12139216-12139235 | Msa1313880:three_prime_UTR | 20.0% |
| !! | ATATTCACAAACTAAAATTG+GGG | - | chr8_4:12138290-12138309 | None:intergenic | 20.0% |
| !! | CAATATTCACAAACTAAAAT+TGG | - | chr8_4:12138292-12138311 | None:intergenic | 20.0% |
| !!! | CAATTTTAGTTTGTGAATAT+TGG | + | chr8_4:12138290-12138309 | Msa1313880:intron | 20.0% |
| !!! | ATTTCTTTGTTTTCATGTAA+GGG | + | chr8_4:12138454-12138473 | Msa1313880:intron | 20.0% |
| !! | TTGTTTGATTAACTTATCTA+AGG | + | chr8_4:12138651-12138670 | Msa1313880:intron | 20.0% |
| !!! | AAATGAAGTATGTTTTCTTT+TGG | + | chr8_4:12138949-12138968 | Msa1313880:intron | 20.0% |
| !!! | AATGAAGTATGTTTTCTTTT+GGG | + | chr8_4:12138950-12138969 | Msa1313880:intron | 20.0% |
| !! | AACATGTCTTAGTTATATTT+AGG | + | chr8_4:12139215-12139234 | Msa1313880:three_prime_UTR | 20.0% |
| !! | ACATGTCTTAGTTATATTTA+GGG | + | chr8_4:12139216-12139235 | Msa1313880:three_prime_UTR | 20.0% |
| !! | AGTATTTTCTTTTCTTCTTC+AGG | - | chr8_4:12137484-12137503 | None:intergenic | 25.0% |
| !!! | TAGATTTTGACGAAATAGAT+GGG | + | chr8_4:12137578-12137597 | Msa1313880:CDS | 25.0% |
| ! | ATGAAAACAAAGAAATCAGT+TGG | - | chr8_4:12138450-12138469 | None:intergenic | 25.0% |
| !!! | GATTTCTTTGTTTTCATGTA+AGG | + | chr8_4:12138453-12138472 | Msa1313880:intron | 25.0% |
| !! | TGAGTTTAGAAAGACTTTTA+AGG | + | chr8_4:12138559-12138578 | Msa1313880:CDS | 25.0% |
| ! | TTGTTTAGTTGAATTGTGTT+TGG | + | chr8_4:12138626-12138645 | Msa1313880:intron | 25.0% |
| ! | TTACATGTATTGCAAAAACT+AGG | + | chr8_4:12138691-12138710 | Msa1313880:intron | 25.0% |
| !!! | ATGTTTTGTTCTGTTTTGAT+TGG | + | chr8_4:12138773-12138792 | Msa1313880:intron | 25.0% |
| ! | TTTATGTGATTCTGATCTAA+TGG | + | chr8_4:12138816-12138835 | Msa1313880:intron | 25.0% |
| ! | TCTGATCTAATGGTATAATA+TGG | + | chr8_4:12138826-12138845 | Msa1313880:intron | 25.0% |
| ! | TCATAAACTTTATCCCAAAA+AGG | - | chr8_4:12138875-12138894 | None:intergenic | 25.0% |
| ! | ACTTGATTTCTCTATTGAAA+CGG | + | chr8_4:12139162-12139181 | Msa1313880:CDS | 25.0% |
| !! | AGTATTTTCTTTTCTTCTTC+AGG | - | chr8_4:12137484-12137503 | None:intergenic | 25.0% |
| !!! | TAGATTTTGACGAAATAGAT+GGG | + | chr8_4:12137578-12137597 | Msa1313880:CDS | 25.0% |
| ! | ATGAAAACAAAGAAATCAGT+TGG | - | chr8_4:12138450-12138469 | None:intergenic | 25.0% |
| !!! | GATTTCTTTGTTTTCATGTA+AGG | + | chr8_4:12138453-12138472 | Msa1313880:intron | 25.0% |
| !! | TGAGTTTAGAAAGACTTTTA+AGG | + | chr8_4:12138559-12138578 | Msa1313880:CDS | 25.0% |
| ! | TTGTTTAGTTGAATTGTGTT+TGG | + | chr8_4:12138626-12138645 | Msa1313880:intron | 25.0% |
| ! | TTACATGTATTGCAAAAACT+AGG | + | chr8_4:12138691-12138710 | Msa1313880:intron | 25.0% |
| !!! | ATGTTTTGTTCTGTTTTGAT+TGG | + | chr8_4:12138773-12138792 | Msa1313880:intron | 25.0% |
| ! | TTTATGTGATTCTGATCTAA+TGG | + | chr8_4:12138816-12138835 | Msa1313880:intron | 25.0% |
| ! | TCTGATCTAATGGTATAATA+TGG | + | chr8_4:12138826-12138845 | Msa1313880:intron | 25.0% |
| ! | TCATAAACTTTATCCCAAAA+AGG | - | chr8_4:12138875-12138894 | None:intergenic | 25.0% |
| ! | ACTTGATTTCTCTATTGAAA+CGG | + | chr8_4:12139162-12139181 | Msa1313880:CDS | 25.0% |
| AAATACTCGAATTTAACCGT+AGG | + | chr8_4:12137497-12137516 | Msa1313880:CDS | 30.0% | |
| !! | GTAGATTTTGACGAAATAGA+TGG | + | chr8_4:12137577-12137596 | Msa1313880:CDS | 30.0% |
| !! | AGATTTTGACGAAATAGATG+GGG | + | chr8_4:12137579-12137598 | Msa1313880:CDS | 30.0% |
| TTGTTTATTATCGAAGATGC+CGG | + | chr8_4:12137704-12137723 | Msa1313880:intron | 30.0% | |
| ! | AAAAAAGAGTGCAAACGAAA+TGG | - | chr8_4:12137961-12137980 | None:intergenic | 30.0% |
| !!! | TCATTTTGATTTTGGCTTCA+AGG | - | chr8_4:12138096-12138115 | None:intergenic | 30.0% |
| GCCAAAATCAAAATGAATCT+CGG | + | chr8_4:12138100-12138119 | Msa1313880:CDS | 30.0% | |
| !!! | ACCGAGATTCATTTTGATTT+TGG | - | chr8_4:12138104-12138123 | None:intergenic | 30.0% |
| !! | ACAGTTGGTTCTTTTGAATT+TGG | - | chr8_4:12138366-12138385 | None:intergenic | 30.0% |
| AAAGGTTAAGGATTCTAATG+CGG | + | chr8_4:12138413-12138432 | Msa1313880:CDS | 30.0% | |
| !!! | TGTGCTGTTTTGTAATGTTT+TGG | + | chr8_4:12138488-12138507 | Msa1313880:intron | 30.0% |
| !!! | TGTTTTGGTTCTATAGTTTG+AGG | + | chr8_4:12138503-12138522 | Msa1313880:intron | 30.0% |
| !!! | GTTTTGGTTCTATAGTTTGA+GGG | + | chr8_4:12138504-12138523 | Msa1313880:intron | 30.0% |
| TTGATTCAAAGGATGTTAAG+AGG | + | chr8_4:12138591-12138610 | Msa1313880:CDS | 30.0% | |
| TGATTCAAAGGATGTTAAGA+GGG | + | chr8_4:12138592-12138611 | Msa1313880:CDS | 30.0% | |
| ATGTATTGCAAAAACTAGGT+TGG | + | chr8_4:12138695-12138714 | Msa1313880:intron | 30.0% | |
| !!! | TGTTCTGTTTTGATTGGATT+AGG | + | chr8_4:12138779-12138798 | Msa1313880:intron | 30.0% |
| GGATAAAGTTTATGAACTCA+TGG | + | chr8_4:12138880-12138899 | Msa1313880:CDS | 30.0% | |
| AGCAGTATTATACAATTCCA+TGG | - | chr8_4:12138921-12138940 | None:intergenic | 30.0% | |
| AAATACTCGAATTTAACCGT+AGG | + | chr8_4:12137497-12137516 | Msa1313880:CDS | 30.0% | |
| !! | GTAGATTTTGACGAAATAGA+TGG | + | chr8_4:12137577-12137596 | Msa1313880:CDS | 30.0% |
| !! | AGATTTTGACGAAATAGATG+GGG | + | chr8_4:12137579-12137598 | Msa1313880:CDS | 30.0% |
| TTGTTTATTATCGAAGATGC+CGG | + | chr8_4:12137704-12137723 | Msa1313880:intron | 30.0% | |
| ! | AAAAAAGAGTGCAAACGAAA+TGG | - | chr8_4:12137961-12137980 | None:intergenic | 30.0% |
| !!! | TCATTTTGATTTTGGCTTCA+AGG | - | chr8_4:12138096-12138115 | None:intergenic | 30.0% |
| GCCAAAATCAAAATGAATCT+CGG | + | chr8_4:12138100-12138119 | Msa1313880:CDS | 30.0% | |
| !!! | ACCGAGATTCATTTTGATTT+TGG | - | chr8_4:12138104-12138123 | None:intergenic | 30.0% |
| !! | ACAGTTGGTTCTTTTGAATT+TGG | - | chr8_4:12138366-12138385 | None:intergenic | 30.0% |
| AAAGGTTAAGGATTCTAATG+CGG | + | chr8_4:12138413-12138432 | Msa1313880:CDS | 30.0% | |
| !!! | TGTGCTGTTTTGTAATGTTT+TGG | + | chr8_4:12138488-12138507 | Msa1313880:intron | 30.0% |
| !!! | TGTTTTGGTTCTATAGTTTG+AGG | + | chr8_4:12138503-12138522 | Msa1313880:intron | 30.0% |
| !!! | GTTTTGGTTCTATAGTTTGA+GGG | + | chr8_4:12138504-12138523 | Msa1313880:intron | 30.0% |
| TTGATTCAAAGGATGTTAAG+AGG | + | chr8_4:12138591-12138610 | Msa1313880:CDS | 30.0% | |
| TGATTCAAAGGATGTTAAGA+GGG | + | chr8_4:12138592-12138611 | Msa1313880:CDS | 30.0% | |
| ATGTATTGCAAAAACTAGGT+TGG | + | chr8_4:12138695-12138714 | Msa1313880:intron | 30.0% | |
| !!! | TGTTCTGTTTTGATTGGATT+AGG | + | chr8_4:12138779-12138798 | Msa1313880:intron | 30.0% |
| GGATAAAGTTTATGAACTCA+TGG | + | chr8_4:12138880-12138899 | Msa1313880:CDS | 30.0% | |
| AGCAGTATTATACAATTCCA+TGG | - | chr8_4:12138921-12138940 | None:intergenic | 30.0% | |
| !! | TCACAAATCTTCTTTGAAGC+AGG | - | chr8_4:12137795-12137814 | None:intergenic | 35.0% |
| AGAAATTCTGACGAAAGTCT+TGG | + | chr8_4:12137833-12137852 | Msa1313880:CDS | 35.0% | |
| AATCAAAGCTTCTTGGGTAA+TGG | - | chr8_4:12137874-12137893 | None:intergenic | 35.0% | |
| GAGTTGAATCAAAGCTTCTT+GGG | - | chr8_4:12137880-12137899 | None:intergenic | 35.0% | |
| CAAAAGAACCAACTGTGAAA+CGG | + | chr8_4:12138370-12138389 | Msa1313880:CDS | 35.0% | |
| AAAAGAACCAACTGTGAAAC+GGG | + | chr8_4:12138371-12138390 | Msa1313880:CDS | 35.0% | |
| TAAAGTTGGGAAAGGGAAAA+AGG | + | chr8_4:12138395-12138414 | Msa1313880:CDS | 35.0% | |
| !!! | GTTTGAGGGTTTTAGTTGAT+TGG | + | chr8_4:12138518-12138537 | Msa1313880:intron | 35.0% |
| GGAAGCTAATCTTGATTCAA+AGG | + | chr8_4:12138580-12138599 | Msa1313880:CDS | 35.0% | |
| !! | TTGCAAAAACTAGGTTGGTA+AGG | + | chr8_4:12138700-12138719 | Msa1313880:intron | 35.0% |
| ! | TTTAGGAGAAGAAGCCTTTT+TGG | + | chr8_4:12138858-12138877 | Msa1313880:intron | 35.0% |
| ! | TTAGGAGAAGAAGCCTTTTT+GGG | + | chr8_4:12138859-12138878 | Msa1313880:intron | 35.0% |
| TATGTTTGTTCAGGATCAAG+AGG | + | chr8_4:12139036-12139055 | Msa1313880:intron | 35.0% | |
| ATGTTTGTTCAGGATCAAGA+GGG | + | chr8_4:12139037-12139056 | Msa1313880:intron | 35.0% | |
| CTATTGAAACGGCTTGATTT+AGG | + | chr8_4:12139173-12139192 | Msa1313880:exon | 35.0% | |
| TAGGCTAAAGCTGTATAGTT+TGG | + | chr8_4:12139192-12139211 | Msa1313880:three_prime_UTR | 35.0% | |
| CAATGCGCAAATAATGTAAC+CGG | - | chr8_4:12139313-12139332 | None:intergenic | 35.0% | |
| GTTACATTATTTGCGCATTG+AGG | + | chr8_4:12139313-12139332 | Msa1313880:three_prime_UTR | 35.0% | |
| !! | TCATTGATGTGTCGTTTGAT+TGG | - | chr8_4:12139360-12139379 | None:intergenic | 35.0% |
| !! | TCACAAATCTTCTTTGAAGC+AGG | - | chr8_4:12137795-12137814 | None:intergenic | 35.0% |
| AGAAATTCTGACGAAAGTCT+TGG | + | chr8_4:12137833-12137852 | Msa1313880:CDS | 35.0% | |
| AATCAAAGCTTCTTGGGTAA+TGG | - | chr8_4:12137874-12137893 | None:intergenic | 35.0% | |
| GAGTTGAATCAAAGCTTCTT+GGG | - | chr8_4:12137880-12137899 | None:intergenic | 35.0% | |
| CAAAAGAACCAACTGTGAAA+CGG | + | chr8_4:12138370-12138389 | Msa1313880:CDS | 35.0% | |
| AAAAGAACCAACTGTGAAAC+GGG | + | chr8_4:12138371-12138390 | Msa1313880:CDS | 35.0% | |
| TAAAGTTGGGAAAGGGAAAA+AGG | + | chr8_4:12138395-12138414 | Msa1313880:CDS | 35.0% | |
| !!! | GTTTGAGGGTTTTAGTTGAT+TGG | + | chr8_4:12138518-12138537 | Msa1313880:intron | 35.0% |
| GGAAGCTAATCTTGATTCAA+AGG | + | chr8_4:12138580-12138599 | Msa1313880:CDS | 35.0% | |
| !! | TTGCAAAAACTAGGTTGGTA+AGG | + | chr8_4:12138700-12138719 | Msa1313880:intron | 35.0% |
| ! | TTTAGGAGAAGAAGCCTTTT+TGG | + | chr8_4:12138858-12138877 | Msa1313880:intron | 35.0% |
| ! | TTAGGAGAAGAAGCCTTTTT+GGG | + | chr8_4:12138859-12138878 | Msa1313880:intron | 35.0% |
| TATGTTTGTTCAGGATCAAG+AGG | + | chr8_4:12139036-12139055 | Msa1313880:intron | 35.0% | |
| ATGTTTGTTCAGGATCAAGA+GGG | + | chr8_4:12139037-12139056 | Msa1313880:intron | 35.0% | |
| CTATTGAAACGGCTTGATTT+AGG | + | chr8_4:12139173-12139192 | Msa1313880:exon | 35.0% | |
| TAGGCTAAAGCTGTATAGTT+TGG | + | chr8_4:12139192-12139211 | Msa1313880:three_prime_UTR | 35.0% | |
| CAATGCGCAAATAATGTAAC+CGG | - | chr8_4:12139313-12139332 | None:intergenic | 35.0% | |
| GTTACATTATTTGCGCATTG+AGG | + | chr8_4:12139313-12139332 | Msa1313880:three_prime_UTR | 35.0% | |
| !! | TCATTGATGTGTCGTTTGAT+TGG | - | chr8_4:12139360-12139379 | None:intergenic | 35.0% |
| AATGCTCCTTGAAGCAAACA+AGG | + | chr8_4:12137435-12137454 | Msa1313880:CDS | 40.0% | |
| ! | TGTTGACCTTGTTTGCTTCA+AGG | - | chr8_4:12137444-12137463 | None:intergenic | 40.0% |
| TCTTCAGGATCAGCGTTAAT+CGG | - | chr8_4:12137469-12137488 | None:intergenic | 40.0% | |
| GAGATCAGGGAATCTAAATG+TGG | + | chr8_4:12137535-12137554 | Msa1313880:CDS | 40.0% | |
| TGAAATAGAAGATCCTCGAC+AGG | + | chr8_4:12137618-12137637 | Msa1313880:CDS | 40.0% | |
| ! | ATATAAGAGCATACCTGTCG+AGG | - | chr8_4:12137634-12137653 | None:intergenic | 40.0% |
| ! | CGAGTTGAATCAAAGCTTCT+TGG | - | chr8_4:12137881-12137900 | None:intergenic | 40.0% |
| GAAGAGAAGAACGAACCATT+TGG | - | chr8_4:12137934-12137953 | None:intergenic | 40.0% | |
| GGGAAAAAATTTCACCTCTC+GGG | - | chr8_4:12138270-12138289 | None:intergenic | 40.0% | |
| GGGGAAAAAATTTCACCTCT+CGG | - | chr8_4:12138271-12138290 | None:intergenic | 40.0% | |
| TGGGAAAGGGAAAAAGGTTA+AGG | + | chr8_4:12138401-12138420 | Msa1313880:CDS | 40.0% | |
| !! | TGATTGGTTTGATTCGTTGC+AGG | + | chr8_4:12138534-12138553 | Msa1313880:intron | 40.0% |
| !! | GATTGGTTTGATTCGTTGCA+GGG | + | chr8_4:12138535-12138554 | Msa1313880:intron | 40.0% |
| !! | AACTAGGTTGGTAAGGAAGA+TGG | + | chr8_4:12138707-12138726 | Msa1313880:intron | 40.0% |
| ACTCATGGCAGAATATGAGA+AGG | + | chr8_4:12138895-12138914 | Msa1313880:CDS | 40.0% | |
| !!! | TTTGCTCTCTTTTCTGAAGC+TGG | + | chr8_4:12139008-12139027 | Msa1313880:intron | 40.0% |
| !! | CTGGTGCTATATGTTTGTTC+AGG | + | chr8_4:12139027-12139046 | Msa1313880:intron | 40.0% |
| ! | ATATCTTTTCGCACTGTCCT+TGG | + | chr8_4:12139274-12139293 | Msa1313880:three_prime_UTR | 40.0% |
| CCTTGGAATATTGCTAATGC+CGG | + | chr8_4:12139291-12139310 | Msa1313880:three_prime_UTR | 40.0% | |
| TTATTTGCGCATTGAGGACT+TGG | + | chr8_4:12139319-12139338 | Msa1313880:three_prime_UTR | 40.0% | |
| AATGCTCCTTGAAGCAAACA+AGG | + | chr8_4:12137435-12137454 | Msa1313880:CDS | 40.0% | |
| ! | TGTTGACCTTGTTTGCTTCA+AGG | - | chr8_4:12137444-12137463 | None:intergenic | 40.0% |
| TCTTCAGGATCAGCGTTAAT+CGG | - | chr8_4:12137469-12137488 | None:intergenic | 40.0% | |
| GAGATCAGGGAATCTAAATG+TGG | + | chr8_4:12137535-12137554 | Msa1313880:CDS | 40.0% | |
| TGAAATAGAAGATCCTCGAC+AGG | + | chr8_4:12137618-12137637 | Msa1313880:CDS | 40.0% | |
| ! | ATATAAGAGCATACCTGTCG+AGG | - | chr8_4:12137634-12137653 | None:intergenic | 40.0% |
| ! | CGAGTTGAATCAAAGCTTCT+TGG | - | chr8_4:12137881-12137900 | None:intergenic | 40.0% |
| GAAGAGAAGAACGAACCATT+TGG | - | chr8_4:12137934-12137953 | None:intergenic | 40.0% | |
| GGGAAAAAATTTCACCTCTC+GGG | - | chr8_4:12138270-12138289 | None:intergenic | 40.0% | |
| GGGGAAAAAATTTCACCTCT+CGG | - | chr8_4:12138271-12138290 | None:intergenic | 40.0% | |
| TGGGAAAGGGAAAAAGGTTA+AGG | + | chr8_4:12138401-12138420 | Msa1313880:CDS | 40.0% | |
| !! | TGATTGGTTTGATTCGTTGC+AGG | + | chr8_4:12138534-12138553 | Msa1313880:intron | 40.0% |
| !! | GATTGGTTTGATTCGTTGCA+GGG | + | chr8_4:12138535-12138554 | Msa1313880:intron | 40.0% |
| !! | AACTAGGTTGGTAAGGAAGA+TGG | + | chr8_4:12138707-12138726 | Msa1313880:intron | 40.0% |
| ACTCATGGCAGAATATGAGA+AGG | + | chr8_4:12138895-12138914 | Msa1313880:CDS | 40.0% | |
| !!! | TTTGCTCTCTTTTCTGAAGC+TGG | + | chr8_4:12139008-12139027 | Msa1313880:intron | 40.0% |
| !! | CTGGTGCTATATGTTTGTTC+AGG | + | chr8_4:12139027-12139046 | Msa1313880:intron | 40.0% |
| ! | ATATCTTTTCGCACTGTCCT+TGG | + | chr8_4:12139274-12139293 | Msa1313880:three_prime_UTR | 40.0% |
| CCTTGGAATATTGCTAATGC+CGG | + | chr8_4:12139291-12139310 | Msa1313880:three_prime_UTR | 40.0% | |
| TTATTTGCGCATTGAGGACT+TGG | + | chr8_4:12139319-12139338 | Msa1313880:three_prime_UTR | 40.0% | |
| AGCCAGACTACACAAAACTC+TGG | + | chr8_4:12137404-12137423 | Msa1313880:CDS | 45.0% | |
| !! | GTCCAGAGTTTTGTGTAGTC+TGG | - | chr8_4:12137409-12137428 | None:intergenic | 45.0% |
| TGTGATGCGCATCATGTTGA+TGG | + | chr8_4:12137810-12137829 | Msa1313880:CDS | 45.0% | |
| CTCGCAAAATGTGCCAAAGA+TGG | + | chr8_4:12137897-12137916 | Msa1313880:CDS | 45.0% | |
| ACTTTAGCCCGTTTCACAGT+TGG | - | chr8_4:12138381-12138400 | None:intergenic | 45.0% | |
| !! | ACTGTGAAACGGGCTAAAGT+TGG | + | chr8_4:12138381-12138400 | Msa1313880:CDS | 45.0% |
| !! | CTGTGAAACGGGCTAAAGTT+GGG | + | chr8_4:12138382-12138401 | Msa1313880:CDS | 45.0% |
| !! | AAACGGGCTAAAGTTGGGAA+AGG | + | chr8_4:12138387-12138406 | Msa1313880:CDS | 45.0% |
| !! | AACGGGCTAAAGTTGGGAAA+GGG | + | chr8_4:12138388-12138407 | Msa1313880:CDS | 45.0% |
| GTAAGGAAGATGGTGAGAAG+TGG | + | chr8_4:12138717-12138736 | Msa1313880:CDS | 45.0% | |
| GGATCAAGAGGGATCTGATA+AGG | + | chr8_4:12139048-12139067 | Msa1313880:intron | 45.0% | |
| CAAGAGGGATCTGATAAGGA+AGG | + | chr8_4:12139052-12139071 | Msa1313880:CDS | 45.0% | |
| GGAAGGCCAATCTGATGATA+AGG | + | chr8_4:12139069-12139088 | Msa1313880:CDS | 45.0% | |
| GGGCTTCCTTATCATCAGAT+TGG | - | chr8_4:12139078-12139097 | None:intergenic | 45.0% | |
| AGGTCGAAGAGTTACAGATG+AGG | + | chr8_4:12139110-12139129 | Msa1313880:CDS | 45.0% | |
| GAGTTACAGATGAGGAGTAG+TGG | + | chr8_4:12139118-12139137 | Msa1313880:CDS | 45.0% | |
| ! | GAGGAGTAGTGGTAGCATTT+TGG | + | chr8_4:12139129-12139148 | Msa1313880:CDS | 45.0% |
| CCGGCATTAGCAATATTCCA+AGG | - | chr8_4:12139294-12139313 | None:intergenic | 45.0% | |
| AGCCAGACTACACAAAACTC+TGG | + | chr8_4:12137404-12137423 | Msa1313880:CDS | 45.0% | |
| !! | GTCCAGAGTTTTGTGTAGTC+TGG | - | chr8_4:12137409-12137428 | None:intergenic | 45.0% |
| TGTGATGCGCATCATGTTGA+TGG | + | chr8_4:12137810-12137829 | Msa1313880:CDS | 45.0% | |
| CTCGCAAAATGTGCCAAAGA+TGG | + | chr8_4:12137897-12137916 | Msa1313880:CDS | 45.0% | |
| ACTTTAGCCCGTTTCACAGT+TGG | - | chr8_4:12138381-12138400 | None:intergenic | 45.0% | |
| !! | ACTGTGAAACGGGCTAAAGT+TGG | + | chr8_4:12138381-12138400 | Msa1313880:CDS | 45.0% |
| !! | CTGTGAAACGGGCTAAAGTT+GGG | + | chr8_4:12138382-12138401 | Msa1313880:CDS | 45.0% |
| !! | AAACGGGCTAAAGTTGGGAA+AGG | + | chr8_4:12138387-12138406 | Msa1313880:CDS | 45.0% |
| !! | AACGGGCTAAAGTTGGGAAA+GGG | + | chr8_4:12138388-12138407 | Msa1313880:CDS | 45.0% |
| GTAAGGAAGATGGTGAGAAG+TGG | + | chr8_4:12138717-12138736 | Msa1313880:CDS | 45.0% | |
| GGATCAAGAGGGATCTGATA+AGG | + | chr8_4:12139048-12139067 | Msa1313880:intron | 45.0% | |
| CAAGAGGGATCTGATAAGGA+AGG | + | chr8_4:12139052-12139071 | Msa1313880:CDS | 45.0% | |
| GGAAGGCCAATCTGATGATA+AGG | + | chr8_4:12139069-12139088 | Msa1313880:CDS | 45.0% | |
| GGGCTTCCTTATCATCAGAT+TGG | - | chr8_4:12139078-12139097 | None:intergenic | 45.0% | |
| AGGTCGAAGAGTTACAGATG+AGG | + | chr8_4:12139110-12139129 | Msa1313880:CDS | 45.0% | |
| GAGTTACAGATGAGGAGTAG+TGG | + | chr8_4:12139118-12139137 | Msa1313880:CDS | 45.0% | |
| ! | GAGGAGTAGTGGTAGCATTT+TGG | + | chr8_4:12139129-12139148 | Msa1313880:CDS | 45.0% |
| CCGGCATTAGCAATATTCCA+AGG | - | chr8_4:12139294-12139313 | None:intergenic | 45.0% | |
| !!! | TTTAAGTTTATTTATTTTTT+TGG | + | chr8_4:12138326-12138345 | Msa1313880:intron | 5.0% |
| !!! | TTTAAGTTTATTTATTTTTT+TGG | + | chr8_4:12138326-12138345 | Msa1313880:intron | 5.0% |
| TAACCGTAGGTTTGCAGACG+AGG | + | chr8_4:12137510-12137529 | Msa1313880:CDS | 50.0% | |
| ATGGCAGTGCTTTCGCCAAA+TGG | + | chr8_4:12137916-12137935 | Msa1313880:CDS | 50.0% | |
| CTGAAGTGAAGAAACCCGAG+AGG | + | chr8_4:12138253-12138272 | Msa1313880:CDS | 50.0% | |
| AGGAAGATGGTGAGAAGTGG+AGG | + | chr8_4:12138720-12138739 | Msa1313880:CDS | 50.0% | |
| GAAGTGGAGGTCTTTGACTG+AGG | + | chr8_4:12138733-12138752 | Msa1313880:CDS | 50.0% | |
| GGCAGAATATGAGAAGGCCA+TGG | + | chr8_4:12138901-12138920 | Msa1313880:CDS | 50.0% | |
| TGTAACTCTTCGACCTCTCC+TGG | - | chr8_4:12139106-12139125 | None:intergenic | 50.0% | |
| TAACCGTAGGTTTGCAGACG+AGG | + | chr8_4:12137510-12137529 | Msa1313880:CDS | 50.0% | |
| ATGGCAGTGCTTTCGCCAAA+TGG | + | chr8_4:12137916-12137935 | Msa1313880:CDS | 50.0% | |
| CTGAAGTGAAGAAACCCGAG+AGG | + | chr8_4:12138253-12138272 | Msa1313880:CDS | 50.0% | |
| AGGAAGATGGTGAGAAGTGG+AGG | + | chr8_4:12138720-12138739 | Msa1313880:CDS | 50.0% | |
| GAAGTGGAGGTCTTTGACTG+AGG | + | chr8_4:12138733-12138752 | Msa1313880:CDS | 50.0% | |
| GGCAGAATATGAGAAGGCCA+TGG | + | chr8_4:12138901-12138920 | Msa1313880:CDS | 50.0% | |
| TGTAACTCTTCGACCTCTCC+TGG | - | chr8_4:12139106-12139125 | None:intergenic | 50.0% | |
| CCTCCTCGTCTGCAAACCTA+CGG | - | chr8_4:12137516-12137535 | None:intergenic | 55.0% | |
| TTGCAGACGAGGAGGAGATC+AGG | + | chr8_4:12137521-12137540 | Msa1313880:CDS | 55.0% | |
| TGCAGACGAGGAGGAGATCA+GGG | + | chr8_4:12137522-12137541 | Msa1313880:CDS | 55.0% | |
| AGCCTCCTGCTGCTGTTCAA+GGG | - | chr8_4:12137733-12137752 | None:intergenic | 55.0% | |
| AAGCCTCCTGCTGCTGTTCA+AGG | - | chr8_4:12137734-12137753 | None:intergenic | 55.0% | |
| !! | GGCGAAAGCACTGCCATCTT+TGG | - | chr8_4:12137913-12137932 | None:intergenic | 55.0% |
| GATAAGGAAGCCCCTACACC+AGG | + | chr8_4:12139085-12139104 | Msa1313880:CDS | 55.0% | |
| TTCGACCTCTCCTGGTGTAG+GGG | - | chr8_4:12139098-12139117 | None:intergenic | 55.0% | |
| CTTCGACCTCTCCTGGTGTA+GGG | - | chr8_4:12139099-12139118 | None:intergenic | 55.0% | |
| TCTTCGACCTCTCCTGGTGT+AGG | - | chr8_4:12139100-12139119 | None:intergenic | 55.0% | |
| CCTCCTCGTCTGCAAACCTA+CGG | - | chr8_4:12137516-12137535 | None:intergenic | 55.0% | |
| TTGCAGACGAGGAGGAGATC+AGG | + | chr8_4:12137521-12137540 | Msa1313880:CDS | 55.0% | |
| TGCAGACGAGGAGGAGATCA+GGG | + | chr8_4:12137522-12137541 | Msa1313880:CDS | 55.0% | |
| AGCCTCCTGCTGCTGTTCAA+GGG | - | chr8_4:12137733-12137752 | None:intergenic | 55.0% | |
| AAGCCTCCTGCTGCTGTTCA+AGG | - | chr8_4:12137734-12137753 | None:intergenic | 55.0% | |
| !! | GGCGAAAGCACTGCCATCTT+TGG | - | chr8_4:12137913-12137932 | None:intergenic | 55.0% |
| GATAAGGAAGCCCCTACACC+AGG | + | chr8_4:12139085-12139104 | Msa1313880:CDS | 55.0% | |
| TTCGACCTCTCCTGGTGTAG+GGG | - | chr8_4:12139098-12139117 | None:intergenic | 55.0% | |
| CTTCGACCTCTCCTGGTGTA+GGG | - | chr8_4:12139099-12139118 | None:intergenic | 55.0% | |
| TCTTCGACCTCTCCTGGTGT+AGG | - | chr8_4:12139100-12139119 | None:intergenic | 55.0% | |
| CCGTAGGTTTGCAGACGAGG+AGG | + | chr8_4:12137513-12137532 | Msa1313880:CDS | 60.0% | |
| CTCCTGCTGCTGTTCAAGGG+GGG | - | chr8_4:12137730-12137749 | None:intergenic | 60.0% | |
| CCTCCTGCTGCTGTTCAAGG+GGG | - | chr8_4:12137731-12137750 | None:intergenic | 60.0% | |
| GCCTCCTGCTGCTGTTCAAG+GGG | - | chr8_4:12137732-12137751 | None:intergenic | 60.0% | |
| CCGTAGGTTTGCAGACGAGG+AGG | + | chr8_4:12137513-12137532 | Msa1313880:CDS | 60.0% | |
| CTCCTGCTGCTGTTCAAGGG+GGG | - | chr8_4:12137730-12137749 | None:intergenic | 60.0% | |
| CCTCCTGCTGCTGTTCAAGG+GGG | - | chr8_4:12137731-12137750 | None:intergenic | 60.0% | |
| GCCTCCTGCTGCTGTTCAAG+GGG | - | chr8_4:12137732-12137751 | None:intergenic | 60.0% | |
| TGCTGCTGTTCAAGGGGGGC+CGG | - | chr8_4:12137726-12137745 | None:intergenic | 65.0% | |
| CCCCCTTGAACAGCAGCAGG+AGG | + | chr8_4:12137728-12137747 | Msa1313880:CDS | 65.0% | |
| GGAAGCCCCTACACCAGGAG+AGG | + | chr8_4:12139090-12139109 | Msa1313880:CDS | 65.0% | |
| TGCTGCTGTTCAAGGGGGGC+CGG | - | chr8_4:12137726-12137745 | None:intergenic | 65.0% | |
| CCCCCTTGAACAGCAGCAGG+AGG | + | chr8_4:12137728-12137747 | Msa1313880:CDS | 65.0% | |
| GGAAGCCCCTACACCAGGAG+AGG | + | chr8_4:12139090-12139109 | Msa1313880:CDS | 65.0% | |
| GGCCCCCCTTGAACAGCAGC+AGG | + | chr8_4:12137725-12137744 | Msa1313880:CDS | 70.0% | |
| GGCCCCCCTTGAACAGCAGC+AGG | + | chr8_4:12137725-12137744 | Msa1313880:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 12137391 | 12139392 | 12137391 | ID=Msa1313880;Name=Msa1313880 |
| chr8_4 | mRNA | 12137391 | 12139392 | 12137391 | ID=Msa1313880-mRNA-1;Parent=Msa1313880;Name=Msa1313880-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.25|0.22|1|1|1|9|203|340 |
| chr8_4 | exon | 12137391 | 12137639 | 12137391 | ID=Msa1313880-mRNA-1:exon:4528;Parent=Msa1313880-mRNA-1 |
| chr8_4 | exon | 12137720 | 12137937 | 12137720 | ID=Msa1313880-mRNA-1:exon:4529;Parent=Msa1313880-mRNA-1 |
| chr8_4 | exon | 12138060 | 12138121 | 12138060 | ID=Msa1313880-mRNA-1:exon:4530;Parent=Msa1313880-mRNA-1 |
| chr8_4 | exon | 12138229 | 12138274 | 12138229 | ID=Msa1313880-mRNA-1:exon:4531;Parent=Msa1313880-mRNA-1 |
| chr8_4 | exon | 12138359 | 12138469 | 12138359 | ID=Msa1313880-mRNA-1:exon:4532;Parent=Msa1313880-mRNA-1 |
| chr8_4 | exon | 12138556 | 12138613 | 12138556 | ID=Msa1313880-mRNA-1:exon:4533;Parent=Msa1313880-mRNA-1 |
| chr8_4 | exon | 12138713 | 12138757 | 12138713 | ID=Msa1313880-mRNA-1:exon:4534;Parent=Msa1313880-mRNA-1 |
| chr8_4 | exon | 12138863 | 12138955 | 12138863 | ID=Msa1313880-mRNA-1:exon:4535;Parent=Msa1313880-mRNA-1 |
| chr8_4 | exon | 12139049 | 12139392 | 12139049 | ID=Msa1313880-mRNA-1:exon:4536;Parent=Msa1313880-mRNA-1 |
| chr8_4 | CDS | 12137391 | 12137639 | 12137391 | ID=Msa1313880-mRNA-1:cds;Parent=Msa1313880-mRNA-1 |
| chr8_4 | CDS | 12137720 | 12137937 | 12137720 | ID=Msa1313880-mRNA-1:cds;Parent=Msa1313880-mRNA-1 |
| chr8_4 | CDS | 12138060 | 12138121 | 12138060 | ID=Msa1313880-mRNA-1:cds;Parent=Msa1313880-mRNA-1 |
| chr8_4 | CDS | 12138229 | 12138274 | 12138229 | ID=Msa1313880-mRNA-1:cds;Parent=Msa1313880-mRNA-1 |
| chr8_4 | CDS | 12138359 | 12138469 | 12138359 | ID=Msa1313880-mRNA-1:cds;Parent=Msa1313880-mRNA-1 |
| chr8_4 | CDS | 12138556 | 12138613 | 12138556 | ID=Msa1313880-mRNA-1:cds;Parent=Msa1313880-mRNA-1 |
| chr8_4 | CDS | 12138713 | 12138757 | 12138713 | ID=Msa1313880-mRNA-1:cds;Parent=Msa1313880-mRNA-1 |
| chr8_4 | CDS | 12138863 | 12138955 | 12138863 | ID=Msa1313880-mRNA-1:cds;Parent=Msa1313880-mRNA-1 |
| chr8_4 | CDS | 12139049 | 12139189 | 12139049 | ID=Msa1313880-mRNA-1:cds;Parent=Msa1313880-mRNA-1 |
| chr8_4 | three_prime_UTR | 12139190 | 12139392 | 12139190 | ID=Msa1313880-mRNA-1:three_prime_utr;Parent=Msa1313880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
