Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313950 | sp|F4IEY4|TRB5_ARATH | 43.137 | 306 | 145 | 9 | 1 | 299 | 1 | 284 | 5.00e-63 | 203 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313950 | G7LI96 | 82.119 | 302 | 38 | 4 | 1 | 302 | 1 | 286 | 7.53e-166 | 471 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1313950 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313950 | MtrunA17_Chr8g0342871 | 82.119 | 302 | 38 | 4 | 1 | 302 | 1 | 286 | 1.45e-169 | 471 |
| Msa1313950 | MtrunA17_Chr2g0329921 | 48.571 | 315 | 135 | 9 | 1 | 301 | 1 | 302 | 6.15e-82 | 249 |
| Msa1313950 | MtrunA17_Chr8g0384671 | 38.785 | 214 | 114 | 5 | 1 | 213 | 1 | 198 | 4.14e-36 | 131 |
| Msa1313950 | MtrunA17_Chr4g0054131 | 38.235 | 204 | 110 | 5 | 1 | 194 | 1 | 198 | 1.92e-34 | 127 |
| Msa1313950 | MtrunA17_Chr2g0293381 | 39.175 | 194 | 111 | 3 | 1 | 194 | 1 | 187 | 7.35e-33 | 122 |
| Msa1313950 | MtrunA17_Chr5g0401061 | 36.735 | 196 | 109 | 4 | 1 | 194 | 1 | 183 | 9.56e-32 | 120 |
| Msa1313950 | MtrunA17_Chr1g0166681 | 55.556 | 63 | 28 | 0 | 1 | 63 | 1 | 63 | 1.44e-18 | 82.0 |
| Msa1313950 | MtrunA17_Chr8g0383821 | 60.345 | 58 | 23 | 0 | 1 | 58 | 1 | 58 | 7.04e-18 | 78.6 |
| Msa1313950 | MtrunA17_Chr7g0260771 | 42.424 | 66 | 37 | 1 | 130 | 194 | 63 | 128 | 8.99e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1313950 | AT1G72740.2 | 44.000 | 300 | 145 | 8 | 1 | 299 | 1 | 278 | 1.97e-66 | 209 |
| Msa1313950 | AT1G72740.1 | 43.137 | 306 | 145 | 9 | 1 | 299 | 1 | 284 | 5.08e-64 | 203 |
| Msa1313950 | AT1G17520.4 | 42.857 | 315 | 136 | 8 | 1 | 299 | 1 | 287 | 9.01e-63 | 200 |
| Msa1313950 | AT1G17520.3 | 43.038 | 316 | 135 | 9 | 1 | 299 | 1 | 288 | 3.23e-61 | 196 |
| Msa1313950 | AT1G17520.1 | 42.056 | 321 | 136 | 9 | 1 | 299 | 1 | 293 | 5.07e-60 | 193 |
| Msa1313950 | AT1G17520.2 | 42.236 | 322 | 135 | 10 | 1 | 299 | 1 | 294 | 1.41e-58 | 190 |
| Msa1313950 | AT1G49950.3 | 37.755 | 196 | 107 | 5 | 1 | 194 | 1 | 183 | 1.18e-31 | 120 |
| Msa1313950 | AT1G49950.1 | 37.755 | 196 | 107 | 5 | 1 | 194 | 1 | 183 | 1.18e-31 | 120 |
| Msa1313950 | AT1G49950.2 | 37.755 | 196 | 107 | 5 | 1 | 194 | 1 | 183 | 1.18e-31 | 120 |
| Msa1313950 | AT3G49850.1 | 33.990 | 203 | 117 | 3 | 1 | 199 | 1 | 190 | 7.72e-28 | 109 |
| Msa1313950 | AT3G49850.2 | 33.990 | 203 | 117 | 3 | 1 | 199 | 1 | 190 | 7.72e-28 | 109 |
| Msa1313950 | AT5G67580.2 | 34.021 | 194 | 121 | 2 | 1 | 194 | 1 | 187 | 1.18e-25 | 103 |
| Msa1313950 | AT5G67580.1 | 34.021 | 194 | 121 | 2 | 1 | 194 | 1 | 187 | 1.18e-25 | 103 |
| Msa1313950 | AT1G54260.1 | 32.804 | 189 | 107 | 3 | 131 | 299 | 6 | 194 | 1.90e-20 | 87.4 |
| Msa1313950 | AT1G54240.1 | 29.310 | 174 | 112 | 5 | 133 | 299 | 57 | 226 | 1.50e-11 | 63.5 |
Find 66 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAATCAGTAGAAAATTTA+AGG | 0.140174 | 8_4:-12232623 | None:intergenic |
| TTTGGTTTGTTTAGGATAAA+TGG | 0.205337 | 8_4:-12236330 | Msa1313950:intron |
| ACCAAATCGTGTTTGGATAT+TGG | 0.214234 | 8_4:-12232654 | Msa1313950:three_prime_UTR |
| TGAAGCTCTGACTACATTAA+AGG | 0.241020 | 8_4:-12234615 | Msa1313950:CDS |
| AAAGACATGGCCCTGGTAAA+TGG | 0.273347 | 8_4:-12236493 | Msa1313950:CDS |
| TCCAATATCCAAACACGATT+TGG | 0.317714 | 8_4:+12232653 | None:intergenic |
| AAAATTTGTAGTCCTGTAAA+TGG | 0.345160 | 8_4:-12232766 | Msa1313950:three_prime_UTR |
| AACTGAAAACAAATCATATC+TGG | 0.352692 | 8_4:-12233066 | Msa1313950:CDS |
| AGCAGAAGCAGGTTTGCATT+TGG | 0.358700 | 8_4:+12236264 | None:intergenic |
| GCAGAAGCAGGTTTGCATTT+GGG | 0.359151 | 8_4:+12236265 | None:intergenic |
| CAAGATAAAAGAAGCCTTGT+TGG | 0.360419 | 8_4:-12233252 | Msa1313950:CDS |
| AAGTTGTCAACACCATTTAC+AGG | 0.368600 | 8_4:+12232754 | None:intergenic |
| TAAGACTACCAAATCGTGTT+TGG | 0.378401 | 8_4:-12232661 | Msa1313950:three_prime_UTR |
| TGGGAAATCAAAAGCTGAAA+TGG | 0.385077 | 8_4:-12236553 | Msa1313950:CDS |
| GAGACTGATGATTGTCGTTT+CGG | 0.386074 | 8_4:+12233158 | None:intergenic |
| TGATTAACAGCAGAAGAAAC+TGG | 0.406976 | 8_4:+12236211 | None:intergenic |
| ACTGGAGCAGCAGCAGGAAC+AGG | 0.426364 | 8_4:+12236229 | None:intergenic |
| ACTACATTAAAGGATACTAA+TGG | 0.429817 | 8_4:-12234605 | Msa1313950:CDS |
| TGCGCGGTGAAACTATCAAA+TGG | 0.448048 | 8_4:-12232851 | Msa1313950:CDS |
| ACATTGTTCATAAAGTTGTT+CGG | 0.449895 | 8_4:+12232971 | None:intergenic |
| GAAGCAGCAGCAGCAGAAGC+AGG | 0.453799 | 8_4:+12236253 | None:intergenic |
| AACCTCAATGAAACTAGAAA+TGG | 0.456719 | 8_4:+12234568 | None:intergenic |
| TTTATCAGATTCCTTTAGTA+GGG | 0.463946 | 8_4:-12232717 | Msa1313950:three_prime_UTR |
| ATAATATTACTCAAGTTCCT+AGG | 0.465364 | 8_4:-12236291 | Msa1313950:CDS |
| CAGCAAAACAAAAGGTGGTC+AGG | 0.470148 | 8_4:-12233181 | Msa1313950:CDS |
| ATTCTCCTTGACCCTCAGTT+CGG | 0.477510 | 8_4:-12236464 | Msa1313950:CDS |
| AGAATGGCTTTCCATTTACC+AGG | 0.481104 | 8_4:+12236482 | None:intergenic |
| GAAGAAACTGGAGCAGCAGC+AGG | 0.490287 | 8_4:+12236223 | None:intergenic |
| ATCACCTTCACCAAAACAAA+AGG | 0.490999 | 8_4:-12233222 | Msa1313950:CDS |
| GAACTGAGGGTCAAGGAGAA+TGG | 0.501381 | 8_4:+12236466 | None:intergenic |
| GGAGGAACAATTTGAAGAGG+AGG | 0.508616 | 8_4:+12236142 | None:intergenic |
| GAAGAAGACGCTCTTATCGC+TGG | 0.509747 | 8_4:-12236521 | Msa1313950:CDS |
| TACATGAGTTTCCCTACTAA+AGG | 0.515232 | 8_4:+12232706 | None:intergenic |
| ACTATCAAATGGGCTTAAGA+TGG | 0.517884 | 8_4:-12232840 | Msa1313950:exon |
| GCGCGGTGAAACTATCAAAT+GGG | 0.518902 | 8_4:-12232850 | Msa1313950:CDS |
| AGTCACTGACTGCAAGGTTG+AGG | 0.520186 | 8_4:-12234224 | Msa1313950:CDS |
| ATTGCTGCAGCAAAAGCATC+AGG | 0.521800 | 8_4:-12234265 | Msa1313950:intron |
| TGCCATTTCTAGTTTCATTG+AGG | 0.525353 | 8_4:-12234570 | Msa1313950:intron |
| ATCACCTTCAGCAAAACAAA+AGG | 0.539850 | 8_4:-12233189 | Msa1313950:CDS |
| TCTGGCAACTGAGGCAGTCA+AGG | 0.549203 | 8_4:-12233048 | Msa1313950:CDS |
| TTGAGGATGCTTGTGAGTCA+TGG | 0.550188 | 8_4:-12234207 | Msa1313950:CDS |
| GGTAACCTTGAGGTCGATGT+TGG | 0.557186 | 8_4:+12236421 | None:intergenic |
| TCAGAAAGTCACTGACTGCA+AGG | 0.561065 | 8_4:-12234230 | Msa1313950:CDS |
| TTAACAACAACATCAGAAGA+AGG | 0.563592 | 8_4:+12236175 | None:intergenic |
| GAGTCATGGGAAGCTTGAAA+AGG | 0.565631 | 8_4:-12234193 | Msa1313950:intron |
| GGTTTGCATTTGGGAAACCT+AGG | 0.568248 | 8_4:+12236274 | None:intergenic |
| TCGTTCCAACATCGACCTCA+AGG | 0.571236 | 8_4:-12236426 | Msa1313950:intron |
| GGAGGAGGAACAATTTGAAG+AGG | 0.571972 | 8_4:+12236139 | None:intergenic |
| TTTGGATATTGGACCCAAAG+TGG | 0.574027 | 8_4:-12232643 | Msa1313950:three_prime_UTR |
| CAAATCATATCTGGCAACTG+AGG | 0.579566 | 8_4:-12233057 | Msa1313950:CDS |
| TCTATTTATGCAGGTTTGCG+CGG | 0.584806 | 8_4:-12232867 | Msa1313950:intron |
| CTGGCAACTGAGGCAGTCAA+GGG | 0.591213 | 8_4:-12233047 | Msa1313950:CDS |
| TTGGAACGAGAAGTGAGTAA+AGG | 0.596141 | 8_4:+12236440 | None:intergenic |
| TGAGGATGCTTGTGAGTCAT+GGG | 0.600774 | 8_4:-12234206 | Msa1313950:CDS |
| GGAATCGAAAGACATGGCCC+TGG | 0.601309 | 8_4:-12236500 | Msa1313950:CDS |
| AGTCTCTGATGATATGCTGA+AGG | 0.602271 | 8_4:-12233123 | Msa1313950:CDS |
| GGTTTGTTTAGGATAAATGG+AGG | 0.604249 | 8_4:-12236327 | Msa1313950:intron |
| ACCTTCAGCAAAACAAAAGG+TGG | 0.623190 | 8_4:-12233186 | Msa1313950:CDS |
| AAGGACCGAACTGAGGGTCA+AGG | 0.625130 | 8_4:+12236459 | None:intergenic |
| ACCTTCACCAAAACAAAAGG+AGG | 0.631938 | 8_4:-12233219 | Msa1313950:CDS |
| TGAGTAAAGGACCGAACTGA+GGG | 0.636132 | 8_4:+12236453 | None:intergenic |
| ACTAGAAATGGCATTTACGT+CGG | 0.639340 | 8_4:+12234580 | None:intergenic |
| GAATGGCTTTCCATTTACCA+GGG | 0.646220 | 8_4:+12236483 | None:intergenic |
| GTGAGTAAAGGACCGAACTG+AGG | 0.646832 | 8_4:+12236452 | None:intergenic |
| ATCGCTGGAATCGAAAGACA+TGG | 0.677427 | 8_4:-12236506 | Msa1313950:CDS |
| TGGCAACTGAGGCAGTCAAG+GGG | 0.694991 | 8_4:-12233046 | Msa1313950:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAATTTTTAATATTTTT+TGG | - | chr8_4:12232903-12232922 | Msa1313950:intron | 0.0% |
| !!! | GACTAAATTTTTTATTTTTT+TGG | + | chr8_4:12233375-12233394 | None:intergenic | 10.0% |
| !!! | ATTATAAATGTTTTGTTAAA+AGG | - | chr8_4:12234135-12234154 | Msa1313950:intron | 10.0% |
| !!! | TTATAAATGTTTTGTTAAAA+GGG | - | chr8_4:12234136-12234155 | Msa1313950:intron | 10.0% |
| !! | ACTAAAAGTTTAATTAAATT+TGG | + | chr8_4:12234331-12234350 | None:intergenic | 10.0% |
| !! | TTAATATATCAGATTATATT+AGG | - | chr8_4:12234567-12234586 | Msa1313950:intron | 10.0% |
| !!! | TAATATTTTTTGGTTTGTTT+AGG | - | chr8_4:12232913-12232932 | Msa1313950:intron | 15.0% |
| !! | AAAACATTTATAATACTTAC+AGG | + | chr8_4:12234129-12234148 | None:intergenic | 15.0% |
| !!! | TTTAATTAAATTTGGTGAAA+CGG | + | chr8_4:12234323-12234342 | None:intergenic | 15.0% |
| !!! | ACTTTTTTTAGATTAAGAAT+CGG | + | chr8_4:12235226-12235245 | None:intergenic | 15.0% |
| !! | ATGTAAGAATTAAAATACCT+AGG | + | chr8_4:12233175-12233194 | None:intergenic | 20.0% |
| !! | AGAGTTTATTCAAGATTTAT+TGG | - | chr8_4:12233651-12233670 | Msa1313950:intron | 20.0% |
| !! | ATAATGTATTGTTACAATTC+TGG | - | chr8_4:12233704-12233723 | Msa1313950:intron | 20.0% |
| !!! | TTTTGTACTAAATAGTGAAT+CGG | - | chr8_4:12233774-12233793 | Msa1313950:intron | 20.0% |
| !! | TAATGATTCTTTACATTCAT+TGG | - | chr8_4:12234056-12234075 | Msa1313950:intron | 20.0% |
| !!! | ACAATATCTTTGTTTCATAA+GGG | + | chr8_4:12234275-12234294 | None:intergenic | 20.0% |
| !!! | TACAATATCTTTGTTTCATA+AGG | + | chr8_4:12234276-12234295 | None:intergenic | 20.0% |
| !!! | TTAATTAAATTTGGTGAAAC+GGG | + | chr8_4:12234322-12234341 | None:intergenic | 20.0% |
| !!! | TTCTTTTGCTATTAATTTGA+TGG | - | chr8_4:12234509-12234528 | Msa1313950:intron | 20.0% |
| !! | ATCAGATTATATTAGGTTAT+TGG | - | chr8_4:12234574-12234593 | Msa1313950:CDS | 20.0% |
| !!! | ACTTGGAAAATTAGTTTATA+TGG | - | chr8_4:12234873-12234892 | Msa1313950:intron | 20.0% |
| !! | TATTGTTAAATCATGTTGTT+TGG | - | chr8_4:12235164-12235183 | Msa1313950:intron | 20.0% |
| !! | TTTTGTTGAATGTGAAGAAT+GGG | - | chr8_4:12232679-12232698 | Msa1313950:three_prime_UTR | 25.0% |
| !!! | TTTGGTTTGTTTAGGATAAA+TGG | - | chr8_4:12232921-12232940 | Msa1313950:intron | 25.0% |
| ! | ATAATATTACTCAAGTTCCT+AGG | - | chr8_4:12232960-12232979 | Msa1313950:intron | 25.0% |
| !!! | TGATGTTTTTAACAACATCT+TGG | + | chr8_4:12233150-12233169 | None:intergenic | 25.0% |
| ! | AAGTAAAATATTGTTGAGTG+AGG | - | chr8_4:12233534-12233553 | Msa1313950:intron | 25.0% |
| ! | AGTAAAATATTGTTGAGTGA+GGG | - | chr8_4:12233535-12233554 | Msa1313950:intron | 25.0% |
| ! | ATTCAAGATTTATTGGAGTA+AGG | - | chr8_4:12233658-12233677 | Msa1313950:intron | 25.0% |
| ! | TACAAAATGTTGTCAAATAG+CGG | + | chr8_4:12233761-12233780 | None:intergenic | 25.0% |
| !! | AATATCTTTGTTTCATAAGG+GGG | + | chr8_4:12234273-12234292 | None:intergenic | 25.0% |
| !! | CAATATCTTTGTTTCATAAG+GGG | + | chr8_4:12234274-12234293 | None:intergenic | 25.0% |
| ! | ACTACATTAAAGGATACTAA+TGG | - | chr8_4:12234646-12234665 | Msa1313950:intron | 25.0% |
| ! | TTGCATAATCTCAAAAAACA+GGG | + | chr8_4:12234792-12234811 | None:intergenic | 25.0% |
| ! | ATTGCATAATCTCAAAAAAC+AGG | + | chr8_4:12234793-12234812 | None:intergenic | 25.0% |
| ! | ATATCAACGACTAGAATAAA+TGG | - | chr8_4:12234824-12234843 | Msa1313950:intron | 25.0% |
| !! | TAATTTTCCTTGATGTAACT+TGG | - | chr8_4:12234856-12234875 | Msa1313950:intron | 25.0% |
| !! | TAATTTTCCAAGTTACATCA+AGG | + | chr8_4:12234866-12234885 | None:intergenic | 25.0% |
| !! | ATTTGAACGTGTATTTTACT+TGG | - | chr8_4:12235138-12235157 | Msa1313950:intron | 25.0% |
| ! | TTTATGTATTCAAGATCTCT+TGG | - | chr8_4:12235376-12235395 | Msa1313950:intron | 25.0% |
| !! | TGGTTAATTTGGAAACTTAT+AGG | - | chr8_4:12235396-12235415 | Msa1313950:intron | 25.0% |
| !! | AACTTGAATTCTTTGAAAGA+GGG | - | chr8_4:12235634-12235653 | Msa1313950:intron | 25.0% |
| ! | AACAAACTTCAAGATATTTC+AGG | + | chr8_4:12235902-12235921 | None:intergenic | 25.0% |
| ! | AACTGAAAACAAATCATATC+TGG | - | chr8_4:12236185-12236204 | Msa1313950:CDS | 25.0% |
| ! | ACATTGTTCATAAAGTTGTT+CGG | + | chr8_4:12236283-12236302 | None:intergenic | 25.0% |
| ! | AATTATAACCATTGATCTTG+TGG | - | chr8_4:12236360-12236379 | Msa1313950:intron | 25.0% |
| ! | ATTATAACCATTGATCTTGT+GGG | - | chr8_4:12236361-12236380 | Msa1313950:intron | 25.0% |
| ! | AAAATTTGTAGTCCTGTAAA+TGG | - | chr8_4:12236485-12236504 | Msa1313950:CDS | 25.0% |
| !! | TTTTATCAGATTCCTTTAGT+AGG | - | chr8_4:12236533-12236552 | Msa1313950:CDS | 25.0% |
| ! | TTTATCAGATTCCTTTAGTA+GGG | - | chr8_4:12236534-12236553 | Msa1313950:CDS | 25.0% |
| !! | GTTTTGTTGAATGTGAAGAA+TGG | - | chr8_4:12232678-12232697 | Msa1313950:three_prime_UTR | 30.0% |
| TTAACAACAACATCAGAAGA+AGG | + | chr8_4:12233079-12233098 | None:intergenic | 30.0% | |
| TTGTTAAAAACATCACACCT+AGG | - | chr8_4:12233155-12233174 | Msa1313950:CDS | 30.0% | |
| GTCAAATTGTTACAGAATAG+TGG | - | chr8_4:12233392-12233411 | Msa1313950:intron | 30.0% | |
| ATTGTTACAGAATAGTGGTT+TGG | - | chr8_4:12233397-12233416 | Msa1313950:intron | 30.0% | |
| ! | GTTGTGAGGAAATTTTATGT+GGG | - | chr8_4:12233419-12233438 | Msa1313950:intron | 30.0% |
| AAATAAACACACGCACTAAA+GGG | + | chr8_4:12233477-12233496 | None:intergenic | 30.0% | |
| AAAATCGTCTTAAAAGGAGA+GGG | + | chr8_4:12233617-12233636 | None:intergenic | 30.0% | |
| CTCTACAAAATCGTCTTAAA+AGG | + | chr8_4:12233623-12233642 | None:intergenic | 30.0% | |
| !!! | CTTTTAAGACGATTTTGTAG+AGG | - | chr8_4:12233621-12233640 | Msa1313950:intron | 30.0% |
| TTGTTAAATAGCAGCTATAG+AGG | + | chr8_4:12233848-12233867 | None:intergenic | 30.0% | |
| ! | CTATAGCTGCTATTTAACAA+CGG | - | chr8_4:12233848-12233867 | Msa1313950:intron | 30.0% |
| ATTATGACTCTGTAGTTAAC+AGG | - | chr8_4:12233976-12233995 | Msa1313950:intron | 30.0% | |
| !! | TGTTTTGTTAAAAGGGTAGA+AGG | - | chr8_4:12234143-12234162 | Msa1313950:intron | 30.0% |
| !! | ATTAGAGCATCATTTTGTAC+TGG | - | chr8_4:12234171-12234190 | Msa1313950:intron | 30.0% |
| !! | TTAGAGCATCATTTTGTACT+GGG | - | chr8_4:12234172-12234191 | Msa1313950:intron | 30.0% |
| !!! | GGTTTTTAAAGTGATCCTAT+AGG | - | chr8_4:12234386-12234405 | Msa1313950:intron | 30.0% |
| ! | GTACTTTTGTTCCTTTTGTT+AGG | - | chr8_4:12234596-12234615 | Msa1313950:CDS | 30.0% |
| ATGACATCATACCTAACAAA+AGG | + | chr8_4:12234610-12234629 | None:intergenic | 30.0% | |
| AACCTCAATGAAACTAGAAA+TGG | + | chr8_4:12234686-12234705 | None:intergenic | 30.0% | |
| ! | TACTATACCATTTTGTGAGT+TGG | - | chr8_4:12234757-12234776 | Msa1313950:intron | 30.0% |
| TTTCAAACCAACTCACAAAA+TGG | + | chr8_4:12234767-12234786 | None:intergenic | 30.0% | |
| !!! | AGTGACTTTCTGAAATTTTG+AGG | + | chr8_4:12235014-12235033 | None:intergenic | 30.0% |
| ACAGACACTAAAAGATACAA+GGG | + | chr8_4:12235283-12235302 | None:intergenic | 30.0% | |
| TCAAGATCTCTTGGTTAATT+TGG | - | chr8_4:12235385-12235404 | Msa1313950:intron | 30.0% | |
| ! | GCATTGTTTTCCACTAAAAT+AGG | - | chr8_4:12235549-12235568 | Msa1313950:intron | 30.0% |
| ! | TTGTTTTCCACTAAAATAGG+TGG | - | chr8_4:12235552-12235571 | Msa1313950:intron | 30.0% |
| ! | TCAAGTTCTAACGAATATGA+TGG | + | chr8_4:12235621-12235640 | None:intergenic | 30.0% |
| ! | GAACTTGAATTCTTTGAAAG+AGG | - | chr8_4:12235633-12235652 | Msa1313950:intron | 30.0% |
| TCTGTTATTGTAAGGATCTT+GGG | - | chr8_4:12235680-12235699 | Msa1313950:intron | 30.0% | |
| !!! | ATGGTGTTGACAACTTTTTT+TGG | - | chr8_4:12236504-12236523 | Msa1313950:CDS | 30.0% |
| !!! | TGGTGTTGACAACTTTTTTT+GGG | - | chr8_4:12236505-12236524 | Msa1313950:CDS | 30.0% |
| !!! | TTTTCTACTGATTCCACTTT+GGG | + | chr8_4:12236624-12236643 | None:intergenic | 30.0% |
| !!! | ATTTTCTACTGATTCCACTT+TGG | + | chr8_4:12236625-12236644 | None:intergenic | 30.0% |
| TGGGAAATCAAAAGCTGAAA+TGG | - | chr8_4:12232698-12232717 | Msa1313950:three_prime_UTR | 35.0% | |
| AAAACGAAAACCCTAAGCTA+GGG | + | chr8_4:12232859-12232878 | None:intergenic | 35.0% | |
| AAAAACGAAAACCCTAAGCT+AGG | + | chr8_4:12232860-12232879 | None:intergenic | 35.0% | |
| ! | GGTTTGTTTAGGATAAATGG+AGG | - | chr8_4:12232924-12232943 | Msa1313950:intron | 35.0% |
| TGATTAACAGCAGAAGAAAC+TGG | + | chr8_4:12233043-12233062 | None:intergenic | 35.0% | |
| !! | ACATCTTGGTCATTTTGAAG+AGG | + | chr8_4:12233136-12233155 | None:intergenic | 35.0% |
| TCTCCTGAACAATTCATCAT+TGG | + | chr8_4:12233243-12233262 | None:intergenic | 35.0% | |
| ! | AGAACCTGAGTTTGATTTCT+TGG | - | chr8_4:12233260-12233279 | Msa1313950:CDS | 35.0% |
| ! | GGTTGTGAGGAAATTTTATG+TGG | - | chr8_4:12233418-12233437 | Msa1313950:intron | 35.0% |
| ! | GAAATTTTATGTGGGTGTCT+GGG | - | chr8_4:12233427-12233446 | Msa1313950:intron | 35.0% |
| AATAAACACACGCACTAAAG+GGG | + | chr8_4:12233476-12233495 | None:intergenic | 35.0% | |
| CAAATAAACACACGCACTAA+AGG | + | chr8_4:12233478-12233497 | None:intergenic | 35.0% | |
| TGCGTGTGTTTATTTGAGTA+TGG | - | chr8_4:12233482-12233501 | Msa1313950:intron | 35.0% | |
| GCGTGTGTTTATTTGAGTAT+GGG | - | chr8_4:12233483-12233502 | Msa1313950:intron | 35.0% | |
| GTGTTTATTTGAGTATGGGT+TGG | - | chr8_4:12233487-12233506 | Msa1313950:intron | 35.0% | |
| CAAAATCGTCTTAAAAGGAG+AGG | + | chr8_4:12233618-12233637 | None:intergenic | 35.0% | |
| ! | TTAAGACGATTTTGTAGAGG+TGG | - | chr8_4:12233624-12233643 | Msa1313950:intron | 35.0% |
| ! | AGTTAACAGGCTTTTGTACT+CGG | - | chr8_4:12233989-12234008 | Msa1313950:intron | 35.0% |
| CTTTACATTCATTGGATGTC+TGG | - | chr8_4:12234064-12234083 | Msa1313950:intron | 35.0% | |
| TATATCGTAGTGACTAGAGA+TGG | - | chr8_4:12234225-12234244 | Msa1313950:CDS | 35.0% | |
| TATGTGACAATCAGTCTGAT+CGG | - | chr8_4:12234358-12234377 | Msa1313950:intron | 35.0% | |
| GTCATTACATGTACACCTAT+AGG | + | chr8_4:12234404-12234423 | None:intergenic | 35.0% | |
| ATAGGTGTACATGTAATGAC+AGG | - | chr8_4:12234404-12234423 | Msa1313950:intron | 35.0% | |
| TAGGTGTACATGTAATGACA+GGG | - | chr8_4:12234405-12234424 | Msa1313950:intron | 35.0% | |
| ! | TGAAGCTCTGACTACATTAA+AGG | - | chr8_4:12234636-12234655 | Msa1313950:CDS | 35.0% |
| ACTAGAAATGGCATTTACGT+CGG | + | chr8_4:12234674-12234693 | None:intergenic | 35.0% | |
| !! | TGCCATTTCTAGTTTCATTG+AGG | - | chr8_4:12234681-12234700 | Msa1313950:intron | 35.0% |
| ! | TTTTGCTGCAGCAATATATG+TGG | + | chr8_4:12234981-12235000 | None:intergenic | 35.0% |
| AAGATACAAGGGAAAAACTG+TGG | + | chr8_4:12235272-12235291 | None:intergenic | 35.0% | |
| CACAGACACTAAAAGATACA+AGG | + | chr8_4:12235284-12235303 | None:intergenic | 35.0% | |
| ! | TGTATCTTTTAGTGTCTGTG+CGG | - | chr8_4:12235284-12235303 | Msa1313950:intron | 35.0% |
| AACTTATAGGTATAGCTGTG+TGG | - | chr8_4:12235409-12235428 | Msa1313950:intron | 35.0% | |
| ACTTATAGGTATAGCTGTGT+GGG | - | chr8_4:12235410-12235429 | Msa1313950:intron | 35.0% | |
| GCTATCGTAGAATATTGCTT+TGG | - | chr8_4:12235463-12235482 | Msa1313950:intron | 35.0% | |
| !! | GTTGTTGAGAAGTTTCTAGT+GGG | + | chr8_4:12235507-12235526 | None:intergenic | 35.0% |
| ! | TGTTGTTGAGAAGTTTCTAG+TGG | + | chr8_4:12235508-12235527 | None:intergenic | 35.0% |
| CTCTGTTATTGTAAGGATCT+TGG | - | chr8_4:12235679-12235698 | Msa1313950:intron | 35.0% | |
| TTATTGTAAGGATCTTGGGT+GGG | - | chr8_4:12235684-12235703 | Msa1313950:intron | 35.0% | |
| ! | ATTGGAAAGAGTGATGATGA+TGG | + | chr8_4:12235749-12235768 | None:intergenic | 35.0% |
| !! | ATTTTGGAGAGTTTTAGTCC+TGG | + | chr8_4:12235812-12235831 | None:intergenic | 35.0% |
| ! | GAAGCAAGGAACATCTATTT+TGG | + | chr8_4:12235828-12235847 | None:intergenic | 35.0% |
| !!! | TCCAATTTTTTACCATCTGC+AGG | - | chr8_4:12235963-12235982 | Msa1313950:intron | 35.0% |
| TCCTGCAGATGGTAAAAAAT+TGG | + | chr8_4:12235967-12235986 | None:intergenic | 35.0% | |
| ! | AACAATTTTGTTCCTGCAGA+TGG | + | chr8_4:12235978-12235997 | None:intergenic | 35.0% |
| ! | CAAGATAAAAGAAGCCTTGT+TGG | - | chr8_4:12235999-12236018 | Msa1313950:intron | 35.0% |
| !!! | AGGTGATTTTTTCACCAACA+AGG | + | chr8_4:12236016-12236035 | None:intergenic | 35.0% |
| ATCACCTTCACCAAAACAAA+AGG | - | chr8_4:12236029-12236048 | Msa1313950:intron | 35.0% | |
| !!! | TTTTGTTTTGCTGAAGGTGA+TGG | + | chr8_4:12236063-12236082 | None:intergenic | 35.0% |
| ATCACCTTCAGCAAAACAAA+AGG | - | chr8_4:12236062-12236081 | Msa1313950:intron | 35.0% | |
| AAATAGACCCACAAGATCAA+TGG | + | chr8_4:12236371-12236390 | None:intergenic | 35.0% | |
| ! | ACTATCAAATGGGCTTAAGA+TGG | - | chr8_4:12236411-12236430 | Msa1313950:intron | 35.0% |
| AAGTTGTCAACACCATTTAC+AGG | + | chr8_4:12236500-12236519 | None:intergenic | 35.0% | |
| !!! | GGTGTTGACAACTTTTTTTG+GGG | - | chr8_4:12236506-12236525 | Msa1313950:CDS | 35.0% |
| TACATGAGTTTCCCTACTAA+AGG | + | chr8_4:12236548-12236567 | None:intergenic | 35.0% | |
| TAAGACTACCAAATCGTGTT+TGG | - | chr8_4:12236590-12236609 | Msa1313950:five_prime_UTR | 35.0% | |
| ACCAAATCGTGTTTGGATAT+TGG | - | chr8_4:12236597-12236616 | Msa1313950:five_prime_UTR | 35.0% | |
| TCCAATATCCAAACACGATT+TGG | + | chr8_4:12236601-12236620 | None:intergenic | 35.0% | |
| GAATGGCTTTCCATTTACCA+GGG | + | chr8_4:12232771-12232790 | None:intergenic | 40.0% | |
| AGAATGGCTTTCCATTTACC+AGG | + | chr8_4:12232772-12232791 | None:intergenic | 40.0% | |
| TTGGAACGAGAAGTGAGTAA+AGG | + | chr8_4:12232814-12232833 | None:intergenic | 40.0% | |
| !! | TCTTGGTCATTTTGAAGAGG+AGG | + | chr8_4:12233133-12233152 | None:intergenic | 40.0% |
| CCTGAACAATTCATCATTGG+TGG | + | chr8_4:12233240-12233259 | None:intergenic | 40.0% | |
| CCACCAATGATGAATTGTTC+AGG | - | chr8_4:12233237-12233256 | Msa1313950:CDS | 40.0% | |
| ! | ACCTGAGTTTGATTTCTTGG+TGG | - | chr8_4:12233263-12233282 | Msa1313950:CDS | 40.0% |
| TCCACCAAGAAATCAAACTC+AGG | + | chr8_4:12233267-12233286 | None:intergenic | 40.0% | |
| TAATTCAGAGTTCGGTCAGA+AGG | + | chr8_4:12233315-12233334 | None:intergenic | 40.0% | |
| !!! | TTTTTTTGGCGTTAACCCTC+CGG | + | chr8_4:12233361-12233380 | None:intergenic | 40.0% |
| !! | AGAATAGTGGTTTGGTTGTG+AGG | - | chr8_4:12233405-12233424 | Msa1313950:intron | 40.0% |
| ! | GGAAATTTTATGTGGGTGTC+TGG | - | chr8_4:12233426-12233445 | Msa1313950:intron | 40.0% |
| ATAAACACACGCACTAAAGG+GGG | + | chr8_4:12233475-12233494 | None:intergenic | 40.0% | |
| !! | TTGAGTATGGGTTGGTTACT+TGG | - | chr8_4:12233495-12233514 | Msa1313950:intron | 40.0% |
| TGTCATATCTCATCCAATGC+AGG | + | chr8_4:12233563-12233582 | None:intergenic | 40.0% | |
| ! | CTGCTATTTAACAACGGTGT+TGG | - | chr8_4:12233854-12233873 | Msa1313950:intron | 40.0% |
| AGTGACATGAATGAGCCTAT+AGG | + | chr8_4:12233894-12233913 | None:intergenic | 40.0% | |
| CATGTCACTCTCTAGATGTT+TGG | - | chr8_4:12233905-12233924 | Msa1313950:intron | 40.0% | |
| ATGTTTGGTTGTTGTAGTCG+TGG | - | chr8_4:12233920-12233939 | Msa1313950:intron | 40.0% | |
| TGTTTGGTTGTTGTAGTCGT+GGG | - | chr8_4:12233921-12233940 | Msa1313950:intron | 40.0% | |
| ! | GCATCATTTTGTACTGGGAT+TGG | - | chr8_4:12234177-12234196 | Msa1313950:intron | 40.0% |
| CAATCAGTCTGATCGGTAAA+AGG | - | chr8_4:12234365-12234384 | Msa1313950:intron | 40.0% | |
| TATCACGTAAGCATCAACAG+AGG | + | chr8_4:12235093-12235112 | None:intergenic | 40.0% | |
| ! | ATCATGTTGTTTGGTCGAGT+TGG | - | chr8_4:12235173-12235192 | Msa1313950:intron | 40.0% |
| TCACCTTTGTTCAAGCTTAG+TGG | - | chr8_4:12235329-12235348 | Msa1313950:intron | 40.0% | |
| AGACCACTAAGCTTGAACAA+AGG | + | chr8_4:12235335-12235354 | None:intergenic | 40.0% | |
| AACAACATGCACAGTCGATA+AGG | - | chr8_4:12235521-12235540 | Msa1313950:intron | 40.0% | |
| !! | TGACAAGCCACCTATTTTAG+TGG | + | chr8_4:12235562-12235581 | None:intergenic | 40.0% |
| ! | CTTGAGTTGCACATATCTCT+GGG | + | chr8_4:12235586-12235605 | None:intergenic | 40.0% |
| ! | ACTTGAGTTGCACATATCTC+TGG | + | chr8_4:12235587-12235606 | None:intergenic | 40.0% |
| ! | GTAGTGGCTCTGTTATTGTA+AGG | - | chr8_4:12235672-12235691 | Msa1313950:intron | 40.0% |
| GTTATTGTAAGGATCTTGGG+TGG | - | chr8_4:12235683-12235702 | Msa1313950:intron | 40.0% | |
| TATTGTAAGGATCTTGGGTG+GGG | - | chr8_4:12235685-12235704 | Msa1313950:intron | 40.0% | |
| !!! | GGGATTTTTTTCGCAAGTAG+AGG | - | chr8_4:12235706-12235725 | Msa1313950:intron | 40.0% |
| AGTGTTGCGTGTAGAAACAT+TGG | + | chr8_4:12235767-12235786 | None:intergenic | 40.0% | |
| TAGATGTTCCTTGCTTCCAT+TGG | - | chr8_4:12235831-12235850 | Msa1313950:intron | 40.0% | |
| AGATGTTCCTTGCTTCCATT+GGG | - | chr8_4:12235832-12235851 | Msa1313950:intron | 40.0% | |
| ACCTTCACCAAAACAAAAGG+AGG | - | chr8_4:12236032-12236051 | Msa1313950:intron | 40.0% | |
| ACCTTCAGCAAAACAAAAGG+TGG | - | chr8_4:12236065-12236084 | Msa1313950:intron | 40.0% | |
| !!! | ACCACCTTTTGTTTTGCTGA+AGG | + | chr8_4:12236069-12236088 | None:intergenic | 40.0% |
| ! | GAGACTGATGATTGTCGTTT+CGG | + | chr8_4:12236096-12236115 | None:intergenic | 40.0% |
| AGTCTCTGATGATATGCTGA+AGG | - | chr8_4:12236128-12236147 | Msa1313950:CDS | 40.0% | |
| CAAATCATATCTGGCAACTG+AGG | - | chr8_4:12236194-12236213 | Msa1313950:CDS | 40.0% | |
| GACAGAAAAACACTCACACA+TGG | - | chr8_4:12236227-12236246 | Msa1313950:CDS | 40.0% | |
| TCTTGTGGGTCTATTTATGC+AGG | - | chr8_4:12236375-12236394 | Msa1313950:intron | 40.0% | |
| TCTATTTATGCAGGTTTGCG+CGG | - | chr8_4:12236384-12236403 | Msa1313950:intron | 40.0% | |
| TTTGGATATTGGACCCAAAG+TGG | - | chr8_4:12236608-12236627 | Msa1313950:five_prime_UTR | 40.0% | |
| ATCGCTGGAATCGAAAGACA+TGG | - | chr8_4:12232745-12232764 | Msa1313950:three_prime_UTR | 45.0% | |
| AAAGACATGGCCCTGGTAAA+TGG | - | chr8_4:12232758-12232777 | Msa1313950:three_prime_UTR | 45.0% | |
| ATTCTCCTTGACCCTCAGTT+CGG | - | chr8_4:12232787-12232806 | Msa1313950:three_prime_UTR | 45.0% | |
| TGAGTAAAGGACCGAACTGA+GGG | + | chr8_4:12232801-12232820 | None:intergenic | 45.0% | |
| AGGTTACCTTACCCTAGCTT+AGG | - | chr8_4:12232845-12232864 | Msa1313950:CDS | 45.0% | |
| GGTTACCTTACCCTAGCTTA+GGG | - | chr8_4:12232846-12232865 | Msa1313950:CDS | 45.0% | |
| GAAAACCCTAAGCTAGGGTA+AGG | + | chr8_4:12232854-12232873 | None:intergenic | 45.0% | |
| GGTTTGCATTTGGGAAACCT+AGG | + | chr8_4:12232980-12232999 | None:intergenic | 45.0% | |
| GCAGAAGCAGGTTTGCATTT+GGG | + | chr8_4:12232989-12233008 | None:intergenic | 45.0% | |
| AGCAGAAGCAGGTTTGCATT+TGG | + | chr8_4:12232990-12233009 | None:intergenic | 45.0% | |
| GGAGGAACAATTTGAAGAGG+AGG | + | chr8_4:12233112-12233131 | None:intergenic | 45.0% | |
| GGAGGAGGAACAATTTGAAG+AGG | + | chr8_4:12233115-12233134 | None:intergenic | 45.0% | |
| !! | TGGTCATTTTGAAGAGGAGG+AGG | + | chr8_4:12233130-12233149 | None:intergenic | 45.0% |
| TGACCGAACTCTGAATTACC+AGG | - | chr8_4:12233317-12233336 | Msa1313950:intron | 45.0% | |
| GACCGAACTCTGAATTACCA+GGG | - | chr8_4:12233318-12233337 | Msa1313950:intron | 45.0% | |
| AGCCCTGGTAATTCAGAGTT+CGG | + | chr8_4:12233323-12233342 | None:intergenic | 45.0% | |
| !! | GGGTTGGTTACTTGGTCAAT+TGG | - | chr8_4:12233503-12233522 | Msa1313950:intron | 45.0% |
| TGGAGTAAGGTTGTCAATCG+CGG | - | chr8_4:12233671-12233690 | Msa1313950:intron | 45.0% | |
| ATGAGCCTATAGGCTATAGC+AGG | + | chr8_4:12233884-12233903 | None:intergenic | 45.0% | |
| ! | AACAGGCTTTTGTACTCGGA+TGG | - | chr8_4:12233993-12234012 | Msa1313950:intron | 45.0% |
| ! | TTTTGTACTCGGATGGTCGA+CGG | - | chr8_4:12234000-12234019 | Msa1313950:intron | 45.0% |
| !! | ATTGCTGCAGCAAAAGCATC+AGG | - | chr8_4:12234986-12235005 | Msa1313950:intron | 45.0% |
| ! | TCAGAAAGTCACTGACTGCA+AGG | - | chr8_4:12235021-12235040 | Msa1313950:intron | 45.0% |
| TTGAGGATGCTTGTGAGTCA+TGG | - | chr8_4:12235044-12235063 | Msa1313950:intron | 45.0% | |
| TGAGGATGCTTGTGAGTCAT+GGG | - | chr8_4:12235045-12235064 | Msa1313950:intron | 45.0% | |
| GAGTCATGGGAAGCTTGAAA+AGG | - | chr8_4:12235058-12235077 | Msa1313950:intron | 45.0% | |
| GAAAAACTGTGGAGCATAGG+AGG | + | chr8_4:12235261-12235280 | None:intergenic | 45.0% | |
| AGGGAAAAACTGTGGAGCAT+AGG | + | chr8_4:12235264-12235283 | None:intergenic | 45.0% | |
| GTATAGCTGTGTGGGTGATT+TGG | - | chr8_4:12235418-12235437 | Msa1313950:intron | 45.0% | |
| TTGCTTTGGCAATTGACCAG+AGG | - | chr8_4:12235477-12235496 | Msa1313950:intron | 45.0% | |
| TGCTTTGGCAATTGACCAGA+GGG | - | chr8_4:12235478-12235497 | Msa1313950:intron | 45.0% | |
| ATTGTAAGGATCTTGGGTGG+GGG | - | chr8_4:12235686-12235705 | Msa1313950:intron | 45.0% | |
| !! | GAGAGTTTTAGTCCTGGCAA+TGG | + | chr8_4:12235806-12235825 | None:intergenic | 45.0% |
| !!! | GCCTCCTTTTGTTTTGGTGA+AGG | + | chr8_4:12236036-12236055 | None:intergenic | 45.0% |
| !! | TTTTGCTGAAGGTGATGGCT+TGG | + | chr8_4:12236058-12236077 | None:intergenic | 45.0% |
| CAGCAAAACAAAAGGTGGTC+AGG | - | chr8_4:12236070-12236089 | Msa1313950:intron | 45.0% | |
| TGCGCGGTGAAACTATCAAA+TGG | - | chr8_4:12236400-12236419 | Msa1313950:intron | 45.0% | |
| GCGCGGTGAAACTATCAAAT+GGG | - | chr8_4:12236401-12236420 | Msa1313950:intron | 45.0% | |
| !! | TTAAAAATTAAAATGAAAAA+AGG | + | chr8_4:12232889-12232908 | None:intergenic | 5.0% |
| GAAGAAGACGCTCTTATCGC+TGG | - | chr8_4:12232730-12232749 | Msa1313950:three_prime_UTR | 50.0% | |
| GAACTGAGGGTCAAGGAGAA+TGG | + | chr8_4:12232788-12232807 | None:intergenic | 50.0% | |
| GTGAGTAAAGGACCGAACTG+AGG | + | chr8_4:12232802-12232821 | None:intergenic | 50.0% | |
| TCGTTCCAACATCGACCTCA+AGG | - | chr8_4:12232825-12232844 | Msa1313950:three_prime_UTR | 50.0% | |
| GGTAACCTTGAGGTCGATGT+TGG | + | chr8_4:12232833-12232852 | None:intergenic | 50.0% | |
| GCTAGGGTAAGGTAACCTTG+AGG | + | chr8_4:12232843-12232862 | None:intergenic | 50.0% | |
| !! | TTTTCAGGGGAAATGAGCCC+TGG | + | chr8_4:12233338-12233357 | None:intergenic | 50.0% |
| GGCTCATTTCCCCTGAAAAC+CGG | - | chr8_4:12233339-12233358 | Msa1313950:intron | 50.0% | |
| TCATTTCCCCTGAAAACCGG+AGG | - | chr8_4:12233342-12233361 | Msa1313950:intron | 50.0% | |
| CATTTCCCCTGAAAACCGGA+GGG | - | chr8_4:12233343-12233362 | Msa1313950:intron | 50.0% | |
| ! | GTTAACCCTCCGGTTTTCAG+GGG | + | chr8_4:12233351-12233370 | None:intergenic | 50.0% |
| ! | CGTTAACCCTCCGGTTTTCA+GGG | + | chr8_4:12233352-12233371 | None:intergenic | 50.0% |
| ACGCACTAAAGGGGGAATTG+TGG | + | chr8_4:12233467-12233486 | None:intergenic | 50.0% | |
| TTGAGTGAGGGTTCCTGCAT+TGG | - | chr8_4:12233547-12233566 | Msa1313950:intron | 50.0% | |
| AGGTTGTCAATCGCGGATAG+CGG | - | chr8_4:12233678-12233697 | Msa1313950:intron | 50.0% | |
| GACCACCTGCTATAGCCTAT+AGG | - | chr8_4:12233876-12233895 | Msa1313950:intron | 50.0% | |
| AGCCTATAGGCTATAGCAGG+TGG | + | chr8_4:12233881-12233900 | None:intergenic | 50.0% | |
| ATGTCTGGTAGTCGTAGTCC+TGG | - | chr8_4:12234079-12234098 | Msa1313950:intron | 50.0% | |
| TGTCTGGTAGTCGTAGTCCT+GGG | - | chr8_4:12234080-12234099 | Msa1313950:intron | 50.0% | |
| AACAAACACCTCTCATGCCC+AGG | + | chr8_4:12234100-12234119 | None:intergenic | 50.0% | |
| ! | AGTCACTGACTGCAAGGTTG+AGG | - | chr8_4:12235027-12235046 | Msa1313950:intron | 50.0% |
| !! | GTTTCTAGTGGGAAACCCTC+TGG | + | chr8_4:12235496-12235515 | None:intergenic | 50.0% |
| ! | CATTGCTAGCTTCCATTGCC+AGG | - | chr8_4:12235791-12235810 | Msa1313950:intron | 50.0% |
| AGGTTTGCCCAATGGAAGCA+AGG | + | chr8_4:12235842-12235861 | None:intergenic | 50.0% | |
| !! | GGCTTGGCCTCCTTTTGTTT+TGG | + | chr8_4:12236042-12236061 | None:intergenic | 50.0% |
| GGAATCGAAAGACATGGCCC+TGG | - | chr8_4:12232751-12232770 | Msa1313950:three_prime_UTR | 55.0% | |
| AAGGACCGAACTGAGGGTCA+AGG | + | chr8_4:12232795-12232814 | None:intergenic | 55.0% | |
| GAAGAAACTGGAGCAGCAGC+AGG | + | chr8_4:12233031-12233050 | None:intergenic | 55.0% | |
| ! | GCGTTAACCCTCCGGTTTTC+AGG | + | chr8_4:12233353-12233372 | None:intergenic | 55.0% |
| AAGGGGGAATTGTGGAGACC+AGG | + | chr8_4:12233459-12233478 | None:intergenic | 55.0% | |
| TGTAGTCGTGGGCGTGAGAA+CGG | - | chr8_4:12233932-12233951 | Msa1313950:intron | 55.0% | |
| GTAGTGCCTCTGCTGTGTAG+TGG | - | chr8_4:12235656-12235675 | Msa1313950:intron | 55.0% | |
| ACAGAGCCACTACACAGCAG+AGG | + | chr8_4:12235665-12235684 | None:intergenic | 55.0% | |
| CCATTGGGCAAACCTTGCCA+CGG | - | chr8_4:12235847-12235866 | Msa1313950:intron | 55.0% | |
| CATTGGGCAAACCTTGCCAC+GGG | - | chr8_4:12235848-12235867 | Msa1313950:intron | 55.0% | |
| ATTGGGCAAACCTTGCCACG+GGG | - | chr8_4:12235849-12235868 | Msa1313950:intron | 55.0% | |
| TCTGGCAACTGAGGCAGTCA+AGG | - | chr8_4:12236203-12236222 | Msa1313950:CDS | 55.0% | |
| CTGGCAACTGAGGCAGTCAA+GGG | - | chr8_4:12236204-12236223 | Msa1313950:CDS | 55.0% | |
| TGGCAACTGAGGCAGTCAAG+GGG | - | chr8_4:12236205-12236224 | Msa1313950:CDS | 55.0% | |
| GAAGCAGCAGCAGCAGAAGC+AGG | + | chr8_4:12233001-12233020 | None:intergenic | 60.0% | |
| ACTGGAGCAGCAGCAGGAAC+AGG | + | chr8_4:12233025-12233044 | None:intergenic | 60.0% | |
| TGGGTGTCTGGGTTCGATCC+TGG | - | chr8_4:12233438-12233457 | Msa1313950:intron | 60.0% | |
| GTCGTAGTCCTGGGCATGAG+AGG | - | chr8_4:12234089-12234108 | Msa1313950:intron | 60.0% | |
| CCGTGGCAAGGTTTGCCCAA+TGG | + | chr8_4:12235850-12235869 | None:intergenic | 60.0% | |
| ! | TTAAGAGCGCAGAGTCCCCG+TGG | + | chr8_4:12235867-12235886 | None:intergenic | 60.0% |
| AGCGCAGAGTCCCCGTGGCA+AGG | + | chr8_4:12235862-12235881 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 12232625 | 12236648 | 12232625 | ID=Msa1313950;Name=Msa1313950 |
| chr8_4 | mRNA | 12232625 | 12236648 | 12232625 | ID=Msa1313950-mRNA-1;Parent=Msa1313950;Name=Msa1313950-mRNA-1;_AED=0.07;_eAED=0.07;_QI=72|1|1|1|1|1|6|220|302 |
| chr8_4 | exon | 12232625 | 12232876 | 12232625 | ID=Msa1313950-mRNA-1:exon:4563;Parent=Msa1313950-mRNA-1 |
| chr8_4 | exon | 12232973 | 12233288 | 12232973 | ID=Msa1313950-mRNA-1:exon:4562;Parent=Msa1313950-mRNA-1 |
| chr8_4 | exon | 12234194 | 12234277 | 12234194 | ID=Msa1313950-mRNA-1:exon:4561;Parent=Msa1313950-mRNA-1 |
| chr8_4 | exon | 12234571 | 12234655 | 12234571 | ID=Msa1313950-mRNA-1:exon:4560;Parent=Msa1313950-mRNA-1 |
| chr8_4 | exon | 12236097 | 12236338 | 12236097 | ID=Msa1313950-mRNA-1:exon:4559;Parent=Msa1313950-mRNA-1 |
| chr8_4 | exon | 12236427 | 12236648 | 12236427 | ID=Msa1313950-mRNA-1:exon:4558;Parent=Msa1313950-mRNA-1 |
| chr8_4 | five_prime_UTR | 12236577 | 12236648 | 12236577 | ID=Msa1313950-mRNA-1:five_prime_utr;Parent=Msa1313950-mRNA-1 |
| chr8_4 | CDS | 12236427 | 12236576 | 12236427 | ID=Msa1313950-mRNA-1:cds;Parent=Msa1313950-mRNA-1 |
| chr8_4 | CDS | 12236097 | 12236338 | 12236097 | ID=Msa1313950-mRNA-1:cds;Parent=Msa1313950-mRNA-1 |
| chr8_4 | CDS | 12234571 | 12234655 | 12234571 | ID=Msa1313950-mRNA-1:cds;Parent=Msa1313950-mRNA-1 |
| chr8_4 | CDS | 12234194 | 12234277 | 12234194 | ID=Msa1313950-mRNA-1:cds;Parent=Msa1313950-mRNA-1 |
| chr8_4 | CDS | 12232973 | 12233288 | 12232973 | ID=Msa1313950-mRNA-1:cds;Parent=Msa1313950-mRNA-1 |
| chr8_4 | CDS | 12232845 | 12232876 | 12232845 | ID=Msa1313950-mRNA-1:cds;Parent=Msa1313950-mRNA-1 |
| chr8_4 | three_prime_UTR | 12232625 | 12232844 | 12232625 | ID=Msa1313950-mRNA-1:three_prime_utr;Parent=Msa1313950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
