AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1315940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1315940 MtrunA17_Chr8g0345691 65.428 269 88 2 159 424 1 267 2.96e-115 343
Msa1315940 MtrunA17_Chr8g0345691 57.065 184 56 2 1 161 1 184 4.39e-64 211
Msa1315940 MtrunA17_Chr8g0345671 65.926 270 85 4 159 424 1 267 3.16e-111 332
Msa1315940 MtrunA17_Chr8g0345671 56.522 184 56 2 1 161 1 183 9.33e-63 207
Msa1315940 MtrunA17_Chr8g0345721 72.727 198 20 3 138 303 5 200 2.21e-94 282
Msa1315940 MtrunA17_Chr8g0345721 57.485 167 40 2 1 138 26 190 2.14e-54 179
Msa1315940 MtrunA17_Chr8g0345711 86.957 138 18 0 1 138 1 138 6.57e-85 257
Msa1315940 MtrunA17_Chr8g0345711 61.688 154 55 2 159 308 1 154 8.05e-61 195
Msa1315940 MtrunA17_Chr8g0345741 71.014 138 37 1 181 315 2 139 1.58e-66 209
Msa1315940 MtrunA17_Chr8g0345741 66.406 128 43 0 23 150 2 129 8.11e-55 179
Msa1315940 MtrunA17_Chr8g0345731 60.526 152 50 4 171 315 25 173 4.13e-57 185
Msa1315940 MtrunA17_Chr8g0345731 65.152 132 43 1 10 138 22 153 3.66e-55 180
Msa1315940 MtrunA17_Chr8g0345701 56.338 142 43 5 171 295 8 147 1.21e-41 145
Msa1315940 MtrunA17_Chr8g0345701 52.482 141 51 3 12 138 7 145 4.03e-39 138
Msa1315940 MtrunA17_Chr5g0428991 49.686 159 66 6 171 319 26 180 8.61e-39 147
Msa1315940 MtrunA17_Chr5g0428991 53.846 130 56 3 12 140 25 151 3.38e-38 146
Msa1315940 MtrunA17_Chr3g0128111 44.186 172 78 7 173 334 45 208 4.93e-38 138
Msa1315940 MtrunA17_Chr3g0128111 53.543 127 55 4 15 140 45 168 1.40e-37 137
Msa1315940 MtrunA17_Chr3g0128151 55.385 130 54 4 12 140 22 148 2.19e-37 143
Msa1315940 MtrunA17_Chr3g0128151 47.500 160 70 6 171 320 23 178 2.26e-37 143
Msa1315940 MtrunA17_Chr2g0309891 44.654 159 74 6 167 315 4 158 8.43e-37 137
Msa1315940 MtrunA17_Chr2g0309891 49.242 132 61 4 11 140 5 132 4.22e-34 130
Msa1315940 MtrunA17_Chr6g0481091 37.229 231 122 9 171 390 7 225 1.15e-36 134
Msa1315940 MtrunA17_Chr6g0481091 46.923 130 65 3 12 140 6 132 1.48e-31 120
Msa1315940 MtrunA17_Chr5g0400461 42.500 200 97 8 171 356 7 202 3.67e-36 135
Msa1315940 MtrunA17_Chr5g0400461 45.185 135 67 3 12 140 6 139 8.28e-31 120
Msa1315940 MtrunA17_Chr2g0318101 35.317 252 149 9 171 419 16 256 1.26e-35 134
Msa1315940 MtrunA17_Chr2g0318101 41.096 146 79 4 12 153 15 157 1.31e-27 112
Msa1315940 MtrunA17_Chr4g0054791 40.724 221 108 10 161 369 4 213 1.39e-34 130
Msa1315940 MtrunA17_Chr4g0054791 46.565 131 67 3 12 140 6 135 2.74e-30 119
Msa1315940 MtrunA17_Chr5g0433781 42.442 172 84 6 171 330 7 175 4.27e-34 134
Msa1315940 MtrunA17_Chr5g0433781 43.605 172 81 7 12 176 6 168 4.23e-33 131
Msa1315940 MtrunA17_Chr8g0364791 42.857 140 73 4 15 153 9 142 4.72e-34 132
Msa1315940 MtrunA17_Chr8g0364791 43.590 156 74 7 168 314 6 156 5.32e-34 132
Msa1315940 MtrunA17_Chr3g0130101 42.675 157 76 6 167 314 6 157 6.20e-34 130
Msa1315940 MtrunA17_Chr3g0130101 43.662 142 73 4 15 155 10 145 5.93e-33 127
Msa1315940 MtrunA17_Chr3g0109821 38.889 198 106 7 171 356 7 201 6.78e-34 134
Msa1315940 MtrunA17_Chr3g0109821 40.462 173 88 6 12 177 6 170 1.68e-30 124
Msa1315940 MtrunA17_Chr7g0252971 42.683 164 75 5 171 316 9 171 3.30e-33 127
Msa1315940 MtrunA17_Chr7g0252971 42.254 142 71 4 12 145 8 146 1.86e-27 111
Msa1315940 MtrunA17_Chr8g0384201 43.571 140 72 4 15 153 9 142 3.47e-33 130
Msa1315940 MtrunA17_Chr8g0384201 43.590 156 74 7 168 314 6 156 3.27e-32 127
Msa1315940 MtrunA17_Chr4g0042561 41.622 185 80 7 171 340 10 181 1.45e-32 124
Msa1315940 MtrunA17_Chr4g0042561 44.615 130 66 5 12 140 9 133 1.67e-25 104
Msa1315940 MtrunA17_Chr1g0197361 43.709 151 75 5 173 315 11 159 4.32e-32 128
Msa1315940 MtrunA17_Chr1g0197361 47.656 128 62 3 15 140 11 135 4.42e-31 125
Msa1315940 MtrunA17_Chr1g0183741 39.877 163 87 5 157 316 4 158 4.66e-32 122
Msa1315940 MtrunA17_Chr1g0183741 41.667 132 73 3 12 142 10 138 1.27e-26 108
Msa1315940 MtrunA17_Chr4g0047841 47.445 137 68 4 160 294 6 140 4.85e-32 124
Msa1315940 MtrunA17_Chr4g0047841 42.105 133 73 3 9 140 12 141 2.47e-26 108
Msa1315940 MtrunA17_Chr3g0130731 44.586 157 73 5 171 317 8 160 1.60e-31 122
Msa1315940 MtrunA17_Chr3g0130731 43.846 130 66 4 12 140 7 130 4.58e-25 103
Msa1315940 MtrunA17_Chr7g0263931 42.581 155 77 5 171 314 12 165 2.34e-31 122
Msa1315940 MtrunA17_Chr7g0263931 39.597 149 79 4 12 152 11 156 3.70e-26 107
Msa1315940 MtrunA17_Chr2g0326361 40.000 175 95 5 171 343 15 181 3.74e-31 121
Msa1315940 MtrunA17_Chr2g0326361 41.221 131 73 3 11 140 13 140 1.15e-25 106
Msa1315940 MtrunA17_Chr3g0124761 43.671 158 74 6 167 314 5 157 9.81e-31 119
Msa1315940 MtrunA17_Chr3g0124761 43.077 130 67 4 12 140 7 130 4.61e-25 103
Msa1315940 MtrunA17_Chr3g0139331 41.333 150 82 4 171 315 12 160 1.13e-30 120
Msa1315940 MtrunA17_Chr3g0139331 41.667 132 73 3 10 140 9 137 1.37e-25 106
Msa1315940 MtrunA17_Chr8g0359921 36.596 235 120 11 167 385 12 233 1.59e-30 120
Msa1315940 MtrunA17_Chr8g0359921 40.441 136 75 4 6 140 8 138 1.13e-23 100
Msa1315940 MtrunA17_Chr7g0261411 40.252 159 84 5 157 312 4 154 1.88e-30 119
Msa1315940 MtrunA17_Chr7g0261411 42.424 132 72 3 12 142 10 138 3.79e-26 107
Msa1315940 MtrunA17_Chr8g0384721 36.058 208 114 7 171 364 8 210 1.89e-30 119
Msa1315940 MtrunA17_Chr8g0384721 41.538 130 69 4 12 140 7 130 2.64e-24 101
Msa1315940 MtrunA17_Chr3g0091921 38.674 181 87 8 144 315 2 167 2.29e-30 119
Msa1315940 MtrunA17_Chr3g0091921 45.865 133 66 5 11 142 15 142 2.43e-26 107
Msa1315940 MtrunA17_Chr5g0417791 44.654 159 66 7 171 314 4 155 3.00e-30 117
Msa1315940 MtrunA17_Chr5g0417791 43.846 130 67 4 12 140 3 127 7.21e-25 102
Msa1315940 MtrunA17_Chr2g0318081 35.433 254 128 11 164 401 10 243 6.22e-30 119
Msa1315940 MtrunA17_Chr2g0318081 38.065 155 81 5 6 150 10 159 8.66e-26 107
Msa1315940 MtrunA17_Chr4g0017921 43.902 164 80 7 169 324 8 167 7.98e-30 118
Msa1315940 MtrunA17_Chr4g0017921 44.928 138 69 5 12 146 8 141 2.32e-26 108
Msa1315940 MtrunA17_Chr8g0361731 40.252 159 78 5 173 315 17 174 9.29e-30 119
Msa1315940 MtrunA17_Chr8g0361731 41.045 134 75 3 8 140 10 140 7.34e-27 111
Msa1315940 MtrunA17_Chr1g0197351 38.798 183 80 6 173 326 45 224 1.03e-29 120
Msa1315940 MtrunA17_Chr1g0197351 40.113 177 97 4 12 182 42 215 6.34e-28 115
Msa1315940 MtrunA17_Chr3g0092671 46.094 128 64 3 15 140 8 132 1.11e-29 120
Msa1315940 MtrunA17_Chr3g0092671 41.060 151 79 4 173 315 8 156 2.57e-29 119
Msa1315940 MtrunA17_Chr2g0316971 47.619 126 63 3 171 294 24 148 1.16e-29 118
Msa1315940 MtrunA17_Chr2g0316971 44.697 132 69 3 12 142 23 151 9.65e-27 110
Msa1315940 MtrunA17_Chr5g0417001 34.021 194 112 4 173 351 17 209 1.99e-29 118
Msa1315940 MtrunA17_Chr5g0417001 41.045 134 75 3 8 140 10 140 6.32e-26 108
Msa1315940 MtrunA17_Chr1g0201021 43.972 141 74 4 5 144 13 149 2.31e-29 120
Msa1315940 MtrunA17_Chr1g0201021 43.151 146 69 7 173 313 22 158 2.10e-26 111
Msa1315940 MtrunA17_Chr6g0484441 40.000 150 82 5 171 315 6 152 4.40e-29 115
Msa1315940 MtrunA17_Chr6g0484441 41.481 135 73 4 12 145 5 134 2.01e-24 102
Msa1315940 MtrunA17_Chr1g0147421 36.066 183 101 5 138 315 6 177 5.78e-29 116
Msa1315940 MtrunA17_Chr1g0147421 44.697 132 70 2 10 140 25 154 1.80e-28 115
Msa1315940 MtrunA17_Chr4g0060931 40.260 154 80 7 171 315 18 168 7.32e-29 116
Msa1315940 MtrunA17_Chr4g0060931 43.182 132 69 4 12 142 17 143 2.90e-25 105
Msa1315940 MtrunA17_Chr6g0453451 42.667 150 75 5 171 318 21 161 8.41e-29 115
Msa1315940 MtrunA17_Chr6g0453451 45.865 133 66 4 12 143 20 147 7.42e-27 109
Msa1315940 MtrunA17_Chr6g0453131 40.252 159 77 5 173 315 18 174 8.96e-29 116
Msa1315940 MtrunA17_Chr6g0453131 42.537 134 71 5 8 140 12 140 2.79e-26 109
Msa1315940 MtrunA17_Chr6g0461661 43.846 130 69 3 12 140 18 144 1.08e-28 115
Msa1315940 MtrunA17_Chr6g0461661 41.732 127 71 3 171 295 19 144 7.07e-28 113
Msa1315940 MtrunA17_Chr5g0398971 43.312 157 73 8 169 314 7 158 1.13e-28 115
Msa1315940 MtrunA17_Chr5g0398971 43.448 145 77 5 12 153 7 149 3.90e-27 111
Msa1315940 MtrunA17_Chr2g0309331 40.571 175 87 7 167 327 8 179 1.43e-28 115
Msa1315940 MtrunA17_Chr2g0309331 39.726 146 82 5 11 153 9 151 1.97e-24 103
Msa1315940 MtrunA17_Chr2g0311661 38.922 167 80 5 169 314 20 185 1.43e-28 114
Msa1315940 MtrunA17_Chr2g0311661 40.972 144 79 5 1 140 9 150 1.02e-24 103
Msa1315940 MtrunA17_Chr8g0385991 39.130 161 85 5 171 320 15 173 1.95e-28 111
Msa1315940 MtrunA17_Chr8g0385991 43.846 130 67 3 12 140 14 138 2.89e-26 105
Msa1315940 MtrunA17_Chr4g0026141 41.290 155 76 5 171 311 6 159 2.08e-28 112
Msa1315940 MtrunA17_Chr4g0026141 38.686 137 80 3 8 141 1 136 1.04e-25 105
Msa1315940 MtrunA17_Chr1g0200561 40.351 171 84 7 152 314 8 168 2.34e-28 114
Msa1315940 MtrunA17_Chr1g0200561 37.226 137 81 4 8 142 15 148 1.26e-23 101
Msa1315940 MtrunA17_Chr8g0372121 42.208 154 77 7 169 314 6 155 2.67e-28 113
Msa1315940 MtrunA17_Chr8g0372121 40.580 138 77 4 7 142 1 135 1.64e-26 108
Msa1315940 MtrunA17_Chr2g0312321 37.356 174 94 6 171 334 12 180 1.55e-27 111
Msa1315940 MtrunA17_Chr2g0312321 39.716 141 77 4 3 142 2 135 1.94e-24 102
Msa1315940 MtrunA17_Chr7g0214071 40.541 148 81 5 171 314 16 160 2.23e-27 109
Msa1315940 MtrunA17_Chr7g0214071 45.385 130 64 3 12 140 15 138 2.79e-25 103
Msa1315940 MtrunA17_Chr5g0405211 40.909 154 79 6 169 314 8 157 2.30e-27 111
Msa1315940 MtrunA17_Chr5g0405211 37.162 148 88 4 8 153 4 148 2.05e-25 106
Msa1315940 MtrunA17_Chr2g0311651 37.500 176 88 5 169 323 21 195 3.05e-27 110
Msa1315940 MtrunA17_Chr2g0311651 43.284 134 71 4 10 140 20 151 9.68e-25 103
Msa1315940 MtrunA17_Chr4g0018391 42.208 154 77 7 169 314 7 156 3.24e-27 111
Msa1315940 MtrunA17_Chr4g0018391 40.278 144 81 4 12 153 7 147 6.31e-26 107
Msa1315940 MtrunA17_Chr4g0076731 39.752 161 88 6 173 328 57 213 4.19e-27 112
Msa1315940 MtrunA17_Chr4g0076731 42.647 136 67 5 9 140 51 179 1.70e-25 107
Msa1315940 MtrunA17_Chr7g0253011 44.776 134 68 4 12 142 17 147 7.39e-27 110
Msa1315940 MtrunA17_Chr7g0253011 43.182 132 69 5 167 294 15 144 7.61e-27 110
Msa1315940 MtrunA17_Chr4g0038751 39.490 157 89 5 173 324 18 173 8.77e-27 108
Msa1315940 MtrunA17_Chr4g0038751 38.281 128 74 4 15 140 18 142 2.81e-21 93.6
Msa1315940 MtrunA17_Chr4g0056541 39.130 161 86 6 169 321 7 163 1.54e-26 109
Msa1315940 MtrunA17_Chr4g0056541 40.278 144 81 4 12 153 7 147 1.55e-26 109
Msa1315940 MtrunA17_Chr7g0217721 46.400 125 62 5 172 294 21 142 1.64e-26 109
Msa1315940 MtrunA17_Chr7g0217721 45.385 130 65 4 14 142 21 145 1.11e-24 104
Msa1315940 MtrunA17_Chr8g0346001 32.645 242 126 10 159 372 5 237 2.21e-26 110
Msa1315940 MtrunA17_Chr8g0346001 38.562 153 80 7 12 154 15 163 1.10e-21 96.7
Msa1315940 MtrunA17_Chr3g0144271 37.086 151 86 3 146 294 6 149 6.67e-26 108
Msa1315940 MtrunA17_Chr3g0144271 40.769 130 74 2 12 140 23 150 1.70e-24 104
Msa1315940 MtrunA17_Chr7g0217711 44.800 125 64 5 172 294 21 142 7.38e-26 103
Msa1315940 MtrunA17_Chr7g0217711 44.615 130 66 4 14 142 21 145 1.71e-25 102
Msa1315940 MtrunA17_Chr2g0321631 39.744 156 78 5 171 311 5 159 1.53e-25 104
Msa1315940 MtrunA17_Chr2g0321631 38.406 138 80 4 13 146 5 141 1.81e-23 98.6
Msa1315940 MtrunA17_Chr5g0442771 31.295 278 143 13 173 416 21 284 4.54e-25 104
Msa1315940 MtrunA17_Chr5g0442771 43.448 145 72 6 11 149 18 158 1.21e-23 100
Msa1315940 MtrunA17_Chr3g0131911 34.911 169 94 5 171 325 15 181 5.03e-25 102
Msa1315940 MtrunA17_Chr3g0131911 37.879 132 74 4 12 140 14 140 2.48e-19 86.7
Msa1315940 MtrunA17_Chr2g0321741 39.041 146 82 5 202 344 23 164 9.32e-25 104
Msa1315940 MtrunA17_Chr2g0321741 50.467 107 48 5 33 138 13 115 1.11e-23 101
Msa1315940 MtrunA17_Chr7g0266701 34.969 163 88 5 171 316 5 166 8.58e-23 97.1
Msa1315940 MtrunA17_Chr7g0266701 33.333 150 95 4 10 155 2 150 4.87e-20 89.4
Msa1315940 MtrunA17_Chr4g0050701 30.636 173 94 6 171 328 12 173 3.56e-20 87.8
Msa1315940 MtrunA17_Chr4g0050701 28.788 132 78 6 12 140 11 129 2.61e-12 65.5
Msa1315940 MtrunA17_Chr8g0384351 33.951 162 87 7 171 330 11 154 1.07e-18 83.6
Msa1315940 MtrunA17_Chr3g0130321 30.319 188 102 7 171 338 8 186 2.04e-15 74.7
Msa1315940 MtrunA17_Chr3g0113001 47.945 73 35 3 223 294 18 88 9.40e-15 74.7
Msa1315940 MtrunA17_Chr3g0113001 47.297 74 36 3 68 140 18 89 5.07e-13 69.3
Msa1315940 MtrunA17_Chr7g0243371 43.243 74 41 1 68 140 17 90 1.91e-13 66.6
Msa1315940 MtrunA17_Chr7g0243371 39.726 73 43 1 223 294 17 89 1.72e-12 63.9
Msa1315940 MtrunA17_Chr7g0274971 33.333 156 77 7 176 313 11 157 6.51e-13 67.8
Msa1315940 MtrunA17_Chr7g0251651 32.558 129 81 5 12 139 18 141 1.65e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1315940 AT4G01550.1 50.667 150 69 3 172 316 6 155 9.39e-42 154
Msa1315940 AT4G01550.1 52.756 127 58 2 14 138 6 132 1.20e-32 128
Msa1315940 AT3G49530.2 50.714 140 66 3 7 145 8 145 4.75e-41 150
Msa1315940 AT3G49530.2 50.000 162 68 6 171 322 14 172 1.37e-39 147
Msa1315940 AT3G49530.1 50.714 140 66 3 7 145 8 145 1.07e-40 151
Msa1315940 AT3G49530.1 50.000 162 68 6 171 322 14 172 2.97e-39 147
Msa1315940 AT1G33060.1 50.685 146 67 4 1 144 12 154 1.36e-39 150
Msa1315940 AT1G33060.1 50.327 153 64 6 171 314 25 174 8.77e-37 142
Msa1315940 AT1G33060.2 51.748 143 64 4 1 141 12 151 1.36e-39 150
Msa1315940 AT1G33060.2 50.327 153 64 6 171 314 25 174 9.52e-37 142
Msa1315940 AT4G35580.1 40.724 221 106 9 171 369 10 227 1.79e-39 148
Msa1315940 AT4G35580.1 55.385 130 54 3 12 140 9 135 8.75e-39 146
Msa1315940 AT4G35580.3 48.101 158 70 5 171 319 10 164 2.48e-39 148
Msa1315940 AT4G35580.3 55.385 130 54 3 12 140 9 135 7.82e-39 147
Msa1315940 AT4G35580.2 48.101 158 70 5 171 319 10 164 2.75e-39 148
Msa1315940 AT4G35580.2 55.385 130 54 3 12 140 9 135 8.66e-39 147
Msa1315940 AT5G24590.2 50.370 135 64 3 12 145 13 145 7.58e-39 145
Msa1315940 AT5G24590.2 47.742 155 70 5 171 316 14 166 1.02e-37 142
Msa1315940 AT4G01540.2 35.857 251 145 7 172 407 6 255 1.13e-38 144
Msa1315940 AT4G01540.2 50.000 128 61 3 14 138 6 133 8.68e-32 125
Msa1315940 AT4G01540.4 35.857 251 145 7 172 407 6 255 1.23e-38 144
Msa1315940 AT4G01540.4 50.000 128 61 3 14 138 6 133 1.10e-31 124
Msa1315940 AT4G01520.1 48.026 152 73 5 171 316 5 156 1.41e-38 141
Msa1315940 AT4G01520.1 48.837 129 63 3 13 138 5 133 1.36e-32 125
Msa1315940 AT4G17980.1 47.134 157 71 4 171 316 7 162 1.49e-38 140
Msa1315940 AT4G17980.1 45.802 131 69 2 11 140 5 134 1.06e-32 124
Msa1315940 AT4G17980.2 47.134 157 71 4 171 316 7 162 2.14e-38 140
Msa1315940 AT4G17980.2 45.802 131 69 2 11 140 5 134 1.93e-32 124
Msa1315940 AT4G01540.3 35.857 251 145 7 172 407 6 255 3.11e-38 143
Msa1315940 AT4G01540.3 50.000 128 61 3 14 138 6 133 9.41e-32 125
Msa1315940 AT4G01540.1 35.857 251 145 7 172 407 6 255 3.89e-38 144
Msa1315940 AT4G01540.1 50.000 128 61 3 14 138 6 133 1.21e-31 126
Msa1315940 AT3G17730.1 41.573 178 82 7 171 339 7 171 1.89e-37 137
Msa1315940 AT3G17730.1 45.070 142 70 4 12 152 6 140 1.67e-32 123
Msa1315940 AT5G17260.1 39.623 212 112 7 12 218 6 206 1.06e-35 137
Msa1315940 AT5G17260.1 46.753 154 69 6 171 314 7 157 1.09e-34 134
Msa1315940 AT2G27300.1 42.408 191 87 8 149 331 1 176 1.21e-35 134
Msa1315940 AT2G27300.1 43.885 139 71 5 15 150 17 151 1.19e-32 126
Msa1315940 AT3G03200.1 52.239 134 58 4 12 143 6 135 3.99e-35 135
Msa1315940 AT3G03200.1 47.500 160 69 7 165 314 3 157 8.34e-35 135
Msa1315940 AT1G69490.1 39.706 204 102 9 171 358 10 208 4.70e-34 128
Msa1315940 AT1G69490.1 39.333 150 78 5 11 152 8 152 4.34e-26 106
Msa1315940 AT3G04070.2 42.286 175 83 5 171 328 11 184 1.17e-33 129
Msa1315940 AT3G04070.2 44.361 133 67 4 12 140 10 139 2.90e-26 108
Msa1315940 AT1G65910.1 37.131 237 125 10 171 386 7 240 1.60e-33 133
Msa1315940 AT1G65910.1 50.000 136 60 5 12 144 6 136 2.94e-32 129
Msa1315940 AT3G10490.1 43.421 152 73 5 173 314 30 178 3.44e-33 125
Msa1315940 AT3G10490.1 40.341 176 93 5 12 182 27 195 4.14e-33 125
Msa1315940 AT3G10480.1 40.341 176 93 5 12 182 27 195 4.93e-33 129
Msa1315940 AT3G10480.1 43.421 152 73 5 173 314 30 178 8.78e-33 129
Msa1315940 AT3G10480.2 40.571 175 93 5 12 182 27 194 5.07e-33 129
Msa1315940 AT3G10480.2 43.046 151 74 5 173 314 30 177 3.58e-32 127
Msa1315940 AT5G46590.1 45.570 158 74 5 171 318 7 162 8.90e-33 125
Msa1315940 AT5G46590.1 38.462 156 83 5 11 163 5 150 3.07e-29 115
Msa1315940 AT1G32510.1 40.000 205 100 8 171 356 7 207 1.75e-32 124
Msa1315940 AT1G32510.1 42.143 140 74 3 7 140 1 139 1.80e-28 113
Msa1315940 AT1G01720.1 44.025 159 74 5 167 314 4 158 3.85e-32 124
Msa1315940 AT1G01720.1 41.538 130 69 4 12 140 7 130 1.52e-24 102
Msa1315940 AT5G08790.1 44.231 156 71 5 171 314 8 159 4.09e-32 123
Msa1315940 AT5G08790.1 42.308 130 68 4 12 140 7 130 2.78e-27 110
Msa1315940 AT3G44290.2 45.324 139 63 5 1 138 11 137 4.48e-32 122
Msa1315940 AT3G44290.2 40.994 161 79 6 159 316 11 158 6.06e-30 116
Msa1315940 AT5G04410.1 43.421 152 74 5 173 315 12 160 5.46e-32 128
Msa1315940 AT5G04410.1 45.926 135 69 3 12 145 9 140 1.48e-29 121
Msa1315940 AT5G09330.5 48.921 139 67 3 12 149 6 141 8.04e-32 127
Msa1315940 AT5G09330.5 45.455 154 66 6 173 314 9 156 2.62e-30 122
Msa1315940 AT5G09330.2 48.921 139 67 3 12 149 6 141 8.04e-32 127
Msa1315940 AT5G09330.2 45.455 154 66 6 173 314 9 156 2.62e-30 122
Msa1315940 AT5G09330.4 48.921 139 67 3 12 149 6 141 8.04e-32 127
Msa1315940 AT5G09330.4 45.455 154 66 6 173 314 9 156 2.62e-30 122
Msa1315940 AT5G09330.3 48.921 139 67 3 12 149 6 141 8.04e-32 127
Msa1315940 AT5G09330.3 45.455 154 66 6 173 314 9 156 2.62e-30 122
Msa1315940 AT5G09330.1 48.921 139 67 3 12 149 6 141 8.04e-32 127
Msa1315940 AT5G09330.1 45.455 154 66 6 173 314 9 156 2.62e-30 122
Msa1315940 AT5G64060.1 44.371 151 72 5 173 314 9 156 9.91e-32 124
Msa1315940 AT5G64060.1 46.269 134 68 3 12 144 6 136 1.86e-30 120
Msa1315940 AT3G10490.2 43.421 152 73 5 173 314 30 178 1.09e-31 125
Msa1315940 AT3G10490.2 40.341 176 93 5 12 182 27 195 1.62e-31 125
Msa1315940 AT5G22290.1 43.885 139 71 5 15 150 24 158 1.15e-31 124
Msa1315940 AT5G22290.1 40.361 166 86 7 156 316 9 166 1.42e-29 118
Msa1315940 AT3G04070.1 47.482 139 67 4 171 304 11 148 2.43e-31 123
Msa1315940 AT3G04070.1 44.361 133 67 4 12 140 10 139 3.73e-26 108
Msa1315940 AT3G44290.1 45.324 139 63 5 1 138 11 137 4.25e-31 122
Msa1315940 AT3G44290.1 40.994 161 79 6 159 316 11 158 6.39e-29 116
Msa1315940 AT3G29035.1 49.206 126 59 5 171 294 25 147 5.44e-31 121
Msa1315940 AT3G29035.1 47.727 132 63 4 12 142 24 150 7.13e-28 112
Msa1315940 AT4G27410.2 37.321 209 107 8 164 360 8 204 8.64e-31 120
Msa1315940 AT4G27410.2 39.706 136 76 4 6 140 8 138 1.94e-24 102
Msa1315940 AT2G24430.2 42.105 152 81 4 171 316 17 167 8.94e-31 120
Msa1315940 AT2G24430.2 44.697 132 69 3 10 140 14 142 5.74e-28 113
Msa1315940 AT2G24430.1 42.105 152 81 4 171 316 17 167 8.94e-31 120
Msa1315940 AT2G24430.1 44.697 132 69 3 10 140 14 142 5.74e-28 113
Msa1315940 AT5G39610.1 41.830 153 77 6 171 314 21 170 1.31e-30 119
Msa1315940 AT5G39610.1 45.926 135 67 4 9 142 17 146 1.46e-27 111
Msa1315940 AT3G15500.1 42.857 161 76 6 164 314 8 162 1.44e-30 120
Msa1315940 AT3G15500.1 41.176 136 74 4 6 140 8 138 2.25e-25 105
Msa1315940 AT1G26870.1 41.212 165 78 6 167 315 15 176 1.49e-30 122
Msa1315940 AT1G26870.1 44.030 134 71 3 8 140 12 142 1.27e-28 117
Msa1315940 AT5G61430.1 42.857 154 76 7 171 315 17 167 1.69e-30 120
Msa1315940 AT5G61430.1 46.212 132 65 5 12 142 16 142 9.34e-27 110
Msa1315940 AT3G10500.1 44.079 152 73 7 173 315 12 160 2.23e-30 123
Msa1315940 AT3G10500.1 47.692 130 64 3 12 140 9 135 3.94e-29 119
Msa1315940 AT5G53950.1 47.619 126 63 3 171 294 18 142 2.44e-30 120
Msa1315940 AT5G53950.1 44.697 132 69 3 12 142 17 145 4.69e-26 108
Msa1315940 AT5G63790.1 41.618 173 83 6 156 314 34 202 3.23e-30 119
Msa1315940 AT5G63790.1 40.000 130 71 4 12 140 50 173 4.90e-24 102
Msa1315940 AT5G63790.2 41.618 173 83 6 156 314 44 212 3.59e-30 119
Msa1315940 AT5G63790.2 40.000 130 71 4 12 140 60 183 5.59e-24 102
Msa1315940 AT5G39820.1 43.704 135 73 3 173 305 23 156 4.43e-30 119
Msa1315940 AT5G39820.1 44.697 132 69 3 10 140 18 146 1.01e-28 115
Msa1315940 AT5G07680.2 42.857 154 76 7 171 315 4 154 4.59e-30 119
Msa1315940 AT5G07680.2 46.923 130 63 5 12 140 3 127 2.77e-26 108
Msa1315940 AT1G52890.1 42.012 169 79 7 164 319 8 170 4.73e-30 119
Msa1315940 AT1G52890.1 41.176 136 74 4 6 140 8 138 6.48e-25 104
Msa1315940 AT3G15510.1 40.881 159 75 5 174 314 21 178 4.80e-30 119
Msa1315940 AT3G15510.1 39.437 142 79 4 16 153 21 159 1.92e-23 101
Msa1315940 AT5G07680.1 42.857 154 76 7 171 315 18 168 5.21e-30 119
Msa1315940 AT5G07680.1 46.923 130 63 5 12 140 17 141 3.01e-26 108
Msa1315940 AT5G46590.2 45.033 151 77 4 171 317 7 155 5.72e-30 117
Msa1315940 AT5G46590.2 40.559 143 74 4 11 152 5 137 3.33e-29 115
Msa1315940 AT1G33280.1 45.752 153 72 7 169 314 8 156 6.36e-30 118
Msa1315940 AT1G33280.1 42.759 145 75 6 12 153 8 147 1.47e-25 106
Msa1315940 AT3G12910.1 45.455 132 69 3 173 301 24 155 8.53e-30 117
Msa1315940 AT3G12910.1 43.796 137 71 4 15 148 24 157 9.11e-27 109
Msa1315940 AT4G10350.1 44.231 156 73 6 169 314 9 160 9.90e-30 118
Msa1315940 AT4G10350.1 43.478 138 71 5 12 146 9 142 1.93e-25 106
Msa1315940 AT1G02230.1 41.026 156 84 5 168 317 1 154 1.99e-29 118
Msa1315940 AT1G02230.1 45.312 128 66 3 13 138 4 129 6.21e-29 116
Msa1315940 AT3G15170.1 40.764 157 82 6 168 315 19 173 2.68e-29 116
Msa1315940 AT3G15170.1 42.748 131 71 3 11 140 19 146 4.79e-26 107
Msa1315940 AT2G02450.1 40.556 180 99 6 140 314 22 198 4.12e-29 117
Msa1315940 AT2G02450.1 42.537 134 65 6 11 140 51 176 1.28e-24 104
Msa1315940 AT2G02450.2 40.556 180 99 6 140 314 22 198 4.80e-29 117
Msa1315940 AT2G02450.2 42.537 134 65 6 11 140 51 176 1.89e-24 104
Msa1315940 AT1G61110.1 41.718 163 74 6 171 314 17 177 9.86e-29 115
Msa1315940 AT1G61110.1 40.580 138 77 4 9 145 13 146 2.11e-23 100
Msa1315940 AT4G27410.3 34.513 226 107 8 164 360 8 221 1.52e-28 114
Msa1315940 AT4G27410.3 35.762 151 78 4 6 140 8 155 7.35e-22 95.9
Msa1315940 AT1G02250.1 42.405 158 81 6 168 318 1 155 1.81e-28 115
Msa1315940 AT1G02250.1 45.312 128 66 3 13 138 4 129 1.19e-26 110
Msa1315940 AT5G18270.1 39.869 153 81 6 171 314 22 172 2.54e-28 114
Msa1315940 AT5G18270.1 43.939 132 69 4 12 142 21 148 5.55e-26 107
Msa1315940 AT2G17040.1 36.765 204 110 8 173 369 9 200 2.71e-28 113
Msa1315940 AT2G17040.1 40.602 133 74 4 10 140 4 133 2.85e-24 102
Msa1315940 AT1G54330.1 42.667 150 77 5 171 314 7 153 3.57e-28 113
Msa1315940 AT1G54330.1 47.328 131 63 4 12 140 6 132 3.30e-27 110
Msa1315940 AT5G18270.2 39.216 153 82 6 171 314 22 172 4.01e-28 114
Msa1315940 AT5G18270.2 43.939 132 69 4 12 142 21 148 3.56e-26 108
Msa1315940 AT3G18400.1 39.735 151 82 6 171 315 6 153 4.49e-28 113
Msa1315940 AT3G18400.1 40.580 138 76 4 8 144 1 133 8.69e-25 104
Msa1315940 AT2G43000.1 40.506 158 83 6 169 318 17 171 5.76e-28 112
Msa1315940 AT2G43000.1 43.307 127 66 4 15 140 21 142 2.43e-24 102
Msa1315940 AT5G66300.1 40.645 155 79 7 169 314 12 162 6.28e-28 112
Msa1315940 AT5G66300.1 41.085 129 71 4 12 138 12 137 4.39e-24 101
Msa1315940 AT1G34190.1 41.935 155 72 6 173 315 19 167 6.88e-28 116
Msa1315940 AT1G34190.1 42.748 131 71 3 15 144 19 146 2.41e-25 108
Msa1315940 AT1G12260.2 41.558 154 78 7 169 314 7 156 7.15e-28 113
Msa1315940 AT1G12260.2 40.278 144 81 4 12 153 7 147 6.72e-26 107
Msa1315940 AT1G62700.1 42.857 154 76 7 169 314 7 156 9.80e-28 114
Msa1315940 AT1G62700.1 40.972 144 80 4 12 153 7 147 8.26e-25 105
Msa1315940 AT1G62700.2 42.857 154 76 7 169 314 7 156 9.80e-28 114
Msa1315940 AT1G62700.2 40.972 144 80 4 12 153 7 147 8.26e-25 105
Msa1315940 AT1G79580.3 43.226 155 78 6 167 314 15 166 1.05e-27 113
Msa1315940 AT1G79580.3 39.860 143 80 5 12 151 17 156 1.11e-21 96.3
Msa1315940 AT1G79580.5 43.226 155 78 6 167 314 15 166 1.05e-27 113
Msa1315940 AT1G79580.5 39.860 143 80 5 12 151 17 156 1.11e-21 96.3
Msa1315940 AT1G79580.4 43.226 155 78 6 167 314 15 166 1.05e-27 113
Msa1315940 AT1G79580.4 39.860 143 80 5 12 151 17 156 1.11e-21 96.3
Msa1315940 AT1G79580.2 43.226 155 78 6 167 314 15 166 1.05e-27 113
Msa1315940 AT1G79580.2 39.860 143 80 5 12 151 17 156 1.11e-21 96.3
Msa1315940 AT1G79580.1 43.226 155 78 6 167 314 15 166 1.05e-27 113
Msa1315940 AT1G79580.1 39.860 143 80 5 12 151 17 156 1.11e-21 96.3
Msa1315940 AT3G10480.3 35.135 185 74 5 173 314 30 211 1.21e-27 115
Msa1315940 AT3G10480.3 33.971 209 93 6 12 182 27 228 1.53e-26 112
Msa1315940 AT3G04060.1 39.869 153 81 6 171 314 21 171 1.37e-27 112
Msa1315940 AT3G04060.1 43.846 130 68 4 12 140 20 145 8.99e-26 107
Msa1315940 AT1G56010.2 35.714 168 96 4 171 328 20 185 1.42e-27 112
Msa1315940 AT1G56010.2 39.568 139 79 3 3 140 10 144 1.10e-24 103
Msa1315940 AT1G76420.1 34.759 187 94 5 135 315 8 172 1.59e-27 112
Msa1315940 AT1G76420.1 40.741 135 76 3 12 145 22 153 1.60e-25 106
Msa1315940 AT1G12260.1 41.558 154 78 7 169 314 7 156 1.70e-27 113
Msa1315940 AT1G12260.1 40.278 144 81 4 12 153 7 147 1.35e-25 107
Msa1315940 AT5G04395.1 39.521 167 79 6 12 163 28 187 2.61e-27 107
Msa1315940 AT5G04395.1 40.816 147 70 4 171 301 29 174 3.08e-26 105
Msa1315940 AT1G77450.1 37.696 191 100 7 171 351 11 192 2.77e-27 109
Msa1315940 AT1G77450.1 40.769 130 70 4 12 140 10 133 9.35e-23 97.1
Msa1315940 AT5G13180.1 37.662 154 87 5 166 314 11 160 6.93e-27 108
Msa1315940 AT5G13180.1 40.769 130 70 3 12 140 14 137 1.39e-22 96.7
Msa1315940 AT2G33480.2 42.857 154 76 8 166 314 12 158 7.73e-27 108
Msa1315940 AT2G33480.2 46.154 130 61 4 12 140 15 136 4.65e-24 101
Msa1315940 AT2G33480.1 42.308 156 76 8 166 314 12 160 7.98e-27 108
Msa1315940 AT2G33480.1 46.154 130 61 4 12 140 15 136 3.96e-24 101
Msa1315940 AT1G71930.2 37.805 164 84 6 159 314 5 158 1.17e-26 109
Msa1315940 AT1G71930.2 36.242 149 90 4 7 153 4 149 4.81e-25 105
Msa1315940 AT1G71930.1 37.805 164 84 6 159 314 5 158 1.17e-26 109
Msa1315940 AT1G71930.1 36.242 149 90 4 7 153 4 149 4.81e-25 105
Msa1315940 AT5G62380.2 40.260 154 80 7 169 314 7 156 2.15e-26 109
Msa1315940 AT5G62380.2 38.194 144 84 4 12 153 7 147 8.00e-24 102
Msa1315940 AT5G62380.1 40.260 154 80 7 169 314 7 156 2.15e-26 109
Msa1315940 AT5G62380.1 38.194 144 84 4 12 153 7 147 8.00e-24 102
Msa1315940 AT2G18060.3 39.610 154 81 6 169 314 9 158 2.22e-26 109
Msa1315940 AT2G18060.3 36.667 150 90 4 6 153 3 149 5.94e-25 105
Msa1315940 AT2G18060.1 39.610 154 81 6 169 314 9 158 2.22e-26 109
Msa1315940 AT2G18060.1 36.667 150 90 4 6 153 3 149 5.94e-25 105
Msa1315940 AT4G36160.1 40.260 154 80 6 169 314 10 159 2.29e-26 109
Msa1315940 AT4G36160.1 38.194 144 84 4 12 153 10 150 4.37e-25 106
Msa1315940 AT4G36160.3 40.260 154 80 6 169 314 10 159 2.29e-26 109
Msa1315940 AT4G36160.3 38.194 144 84 4 12 153 10 150 4.37e-25 106
Msa1315940 AT4G36160.2 40.260 154 80 6 169 314 14 163 2.54e-26 109
Msa1315940 AT4G36160.2 38.194 144 84 4 12 153 14 154 5.17e-25 105
Msa1315940 AT4G28530.1 36.810 163 85 5 171 315 11 173 2.58e-26 109
Msa1315940 AT4G28530.1 36.000 150 78 3 12 145 10 157 2.21e-22 98.2
Msa1315940 AT1G34180.3 45.038 131 68 3 15 144 19 146 3.38e-26 110
Msa1315940 AT1G34180.3 43.651 126 64 4 173 294 19 141 2.01e-24 105
Msa1315940 AT1G34180.1 45.038 131 68 3 15 144 19 146 4.28e-26 110
Msa1315940 AT1G34180.1 43.651 126 64 4 173 294 19 141 3.39e-24 105
Msa1315940 AT5G22380.1 40.909 154 76 6 172 311 7 159 1.14e-25 104
Msa1315940 AT5G22380.1 38.028 142 83 4 8 145 1 141 2.37e-23 98.2
Msa1315940 AT3G04420.2 39.073 151 85 5 171 316 4 152 2.63e-24 102
Msa1315940 AT3G04420.2 40.714 140 77 4 13 149 4 140 3.34e-23 99.4
Msa1315940 AT2G46770.1 32.743 226 122 9 156 355 3 224 3.29e-24 103
Msa1315940 AT2G46770.1 40.909 132 71 5 12 140 16 143 1.73e-21 95.5
Msa1315940 AT3G04420.1 39.073 151 85 5 171 316 4 152 3.60e-24 102
Msa1315940 AT3G04420.1 40.714 140 77 4 13 149 4 140 4.31e-23 100
Msa1315940 AT1G52880.1 40.506 158 76 5 174 314 21 177 1.23e-23 100
Msa1315940 AT1G52880.1 39.007 141 80 4 16 153 21 158 2.17e-19 89.0
Msa1315940 AT1G34180.4 41.259 143 68 4 15 144 19 158 1.53e-23 102
Msa1315940 AT1G34180.4 39.130 138 65 4 173 294 19 153 2.24e-22 99.4
Msa1315940 AT1G34180.2 41.259 143 68 4 15 144 19 158 1.78e-23 103
Msa1315940 AT1G34180.2 39.130 138 65 4 173 294 19 153 3.58e-22 99.4
Msa1315940 AT1G32770.1 37.952 166 79 7 169 314 16 177 2.01e-23 101
Msa1315940 AT1G32770.1 40.909 132 71 5 12 140 16 143 1.12e-20 93.2
Msa1315940 AT3G12977.1 33.333 177 107 5 171 339 19 192 2.81e-23 99.4
Msa1315940 AT3G12977.1 39.568 139 76 5 4 140 10 142 1.80e-22 97.1
Msa1315940 AT3G44350.1 40.000 135 77 3 12 143 5 138 5.36e-23 95.1
Msa1315940 AT3G44350.1 37.984 129 73 3 172 294 7 134 1.55e-22 94.0
Msa1315940 AT3G61910.1 36.686 169 80 7 169 314 11 175 5.51e-23 99.4
Msa1315940 AT3G61910.1 40.000 135 74 5 12 143 11 141 1.75e-22 98.2
Msa1315940 AT3G44350.2 34.615 156 89 4 172 315 7 161 9.48e-23 96.7
Msa1315940 AT3G44350.2 40.000 135 77 3 12 143 5 138 1.57e-22 96.3
Msa1315940 AT1G01010.1 38.462 156 83 5 172 316 5 158 2.40e-22 99.0
Msa1315940 AT1G01010.1 40.602 133 69 4 14 138 5 135 1.37e-18 87.8
Msa1315940 AT1G02220.1 38.356 146 82 4 171 312 4 145 2.78e-22 98.2
Msa1315940 AT1G02220.1 41.727 139 74 4 13 149 4 137 9.93e-21 94.0
Msa1315940 AT1G32870.1 38.961 154 78 7 173 315 13 161 1.29e-20 94.4
Msa1315940 AT1G32870.1 42.969 128 67 4 12 138 10 132 1.44e-19 91.3
Msa1315940 AT1G32870.2 38.961 154 78 7 173 315 13 161 1.37e-20 94.4
Msa1315940 AT1G32870.2 42.969 128 67 4 12 138 10 132 1.50e-19 91.3
Msa1315940 AT1G32870.3 38.961 154 78 7 173 315 49 197 1.65e-20 94.4
Msa1315940 AT1G32870.3 42.969 128 67 4 12 138 46 168 1.58e-19 91.3
Msa1315940 AT3G04430.1 43.810 105 56 3 18 122 6 107 2.11e-20 89.0
Msa1315940 AT3G04430.1 39.850 133 65 4 176 295 6 136 4.11e-19 85.5
Msa1315940 AT5G64530.2 37.795 127 62 6 171 294 4 116 1.40e-18 82.8
Msa1315940 AT5G64530.2 34.884 129 66 6 12 138 3 115 8.70e-16 75.1
Msa1315940 AT5G64530.1 37.795 127 62 6 171 294 4 116 1.51e-18 83.6
Msa1315940 AT5G64530.1 34.884 129 66 6 12 138 3 115 1.18e-15 75.5
Msa1315940 AT4G10350.2 44.792 96 45 3 225 314 20 113 1.01e-16 80.9
Msa1315940 AT4G10350.2 43.750 80 40 3 69 146 19 95 2.88e-12 67.4
Msa1315940 AT1G56010.1 35.398 113 62 3 225 328 8 118 1.81e-16 79.3
Msa1315940 AT1G56010.1 43.056 72 38 2 70 140 8 77 3.41e-11 63.9
Msa1315940 AT5G61430.2 40.404 99 49 5 225 315 8 104 5.12e-15 75.5
Msa1315940 AT5G61430.2 44.444 81 42 3 63 142 1 79 4.50e-12 66.6
Msa1315940 AT3G12977.2 33.607 122 72 3 225 339 20 139 1.71e-14 72.8
Msa1315940 AT3G12977.2 41.772 79 43 2 63 140 13 89 1.73e-12 67.0
Msa1315940 AT4G28530.2 34.188 117 60 2 12 113 10 124 6.05e-14 72.8
Msa1315940 AT4G28530.2 36.792 106 51 3 171 260 11 116 1.03e-13 72.0
Msa1315940 AT2G33480.3 40.404 99 49 5 223 314 8 103 2.73e-13 69.3
Msa1315940 AT3G10490.4 42.500 80 37 3 242 314 1 78 2.69e-12 68.2
Msa1315940 AT3G10490.3 42.500 80 37 3 242 314 1 78 2.69e-12 68.2
Msa1315940 AT3G56530.1 32.215 149 90 7 171 311 53 198 4.53e-12 67.0
Msa1315940 AT5G14000.2 30.147 136 88 4 171 303 16 147 7.96e-12 63.5
Msa1315940 AT3G55210.1 29.878 164 93 7 166 311 7 166 1.06e-11 65.5
Msa1315940 AT5G14490.4 30.636 173 95 7 171 321 56 225 2.27e-11 65.5
Msa1315940 AT5G14000.1 31.061 132 84 4 171 299 16 143 2.46e-11 63.2
Msa1315940 AT5G14490.1 30.636 173 95 7 171 321 59 228 2.60e-11 65.1
Msa1315940 AT5G14490.3 30.636 173 95 7 171 321 59 228 2.68e-11 65.1
Msa1315940 AT5G14490.2 30.636 173 95 7 171 321 56 225 2.97e-11 64.3

Find 82 sgRNAs with CRISPR-Local

Find 229 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAATCCCAATAACTTTAT+TGG 0.134192 8_4:-15536437 None:intergenic
GAGCAACAAAGTTTGGATTT+TGG 0.202094 8_4:+15534782 Msa1315940:CDS
ATTGACCCCATATTTATTTC+TGG 0.228118 8_4:-15537659 None:intergenic
CTTAAGAGAGCAACAAAGTT+TGG 0.245550 8_4:+15534775 Msa1315940:CDS
AGGGGTACCAATAAAGTTAT+TGG 0.260533 8_4:+15536430 Msa1315940:CDS
ACAAGTATGCAAAGAGTAAA+AGG 0.277265 8_4:+15536344 Msa1315940:CDS
TTTGCATACTTGTATTTAAT+AGG 0.285334 8_4:-15536334 None:intergenic
CACTTTGCCAGAAATAAATA+TGG 0.297684 8_4:+15537652 Msa1315940:CDS
TACCAAGCAACTCGTTTCTA+AGG 0.320914 8_4:-15536110 None:intergenic
AGAGGTACTGACGAAGTTAT+TGG 0.321119 8_4:+15534838 Msa1315940:CDS
CAAAGAGTAAAAGGATTAAT+AGG 0.325883 8_4:+15536353 Msa1315940:CDS
ATTCTTCTTGTTCCTCCTGT+TGG 0.344603 8_4:+15536045 Msa1315940:CDS
GGGGTACCAATAAAGTTATT+GGG 0.346987 8_4:+15536431 Msa1315940:CDS
GGACCGTAACATTAGGATTA+GGG 0.353719 8_4:+15536411 Msa1315940:CDS
TGGACCGTAACATTAGGATT+AGG 0.356604 8_4:+15536410 Msa1315940:CDS
ATTCATGATGTTCTTCCTGT+TGG 0.372337 8_4:+15534461 Msa1315940:CDS
ATCCTGGTGTTAAAACCAAC+TGG 0.372389 8_4:+15534896 Msa1315940:CDS
TTTGCATACTTGTATTCAAT+AGG 0.378777 8_4:-15534742 None:intergenic
TACTACCTTGCTCCTCATCC+TGG 0.411756 8_4:+15534880 Msa1315940:CDS
TACCATGAAAATCCTGTTCC+TGG 0.412727 8_4:+15536472 Msa1315940:CDS
CGACAGTTGCAAACGTGCTC+TGG 0.416130 8_4:-15537820 None:intergenic
CTGGAATGGACCGTAACATT+AGG 0.421180 8_4:+15536404 Msa1315940:CDS
AGGGAAAGTATTTGTCTGCT+TGG 0.424155 8_4:-15537697 None:intergenic
TTATATTTCTTTCAGGTAAG+TGG 0.435813 8_4:+15537629 Msa1315940:intron
TTCCTGGTGTTAAGACCAAT+TGG 0.438457 8_4:+15536488 Msa1315940:CDS
GAGGTACTGACGAAGTTATT+GGG 0.441704 8_4:+15534839 Msa1315940:CDS
GAGTTCGAGAATAATAGTTC+CGG 0.455159 8_4:-15537755 None:intergenic
TTGGTCTTAACACCAGGAAC+AGG 0.462197 8_4:-15536484 None:intergenic
TGTATTCAAGTATAAACCTT+GGG 0.462690 8_4:+15534586 Msa1315940:CDS
ACTCAACAATCTTCAATCAA+TGG 0.467019 8_4:+15537725 Msa1315940:CDS
TGAAGATTGTTGAGTAGAGA+AGG 0.467837 8_4:-15537717 None:intergenic
TTTACTAACTCTTGATCTGT+TGG 0.468729 8_4:-15534497 None:intergenic
GATCATTCGATTAAGAATAG+AGG 0.474483 8_4:+15534820 Msa1315940:CDS
ACTTTGCCAGAAATAAATAT+GGG 0.475878 8_4:+15537653 Msa1315940:CDS
CTGATTAGCTCTTCATCTGT+TGG 0.480022 8_4:-15536081 None:intergenic
AAATATGGGGTCAATGTTTG+AGG 0.481637 8_4:+15537667 Msa1315940:CDS
AACAGGAGGAACAAGAAGAA+TGG 0.482221 8_4:-15536043 None:intergenic
AGTGATAAAGTCTGATGATC+CGG 0.483678 8_4:+15536294 Msa1315940:intron
GGACAAAATCTGAATCCAAC+AGG 0.487685 8_4:-15536060 None:intergenic
GGACGGAATCTGAATCCAAC+AGG 0.489981 8_4:-15534476 None:intergenic
TATCTCAGAAACAAGTTACT+TGG 0.491522 8_4:+15534524 Msa1315940:CDS
TGCCACCTTTGATGATCCCC+AGG 0.491778 8_4:+15536531 Msa1315940:CDS
ATACTCATGAATGATCCAAT+TGG 0.492502 8_4:-15536503 None:intergenic
TACCTTAGAAACGAGTTGCT+TGG 0.499690 8_4:+15536108 Msa1315940:CDS
TTCAATCAATGGAAATGAGC+CGG 0.503364 8_4:+15537736 Msa1315940:CDS
GAAGATTGTTGAGTAGAGAA+GGG 0.509614 8_4:-15537716 None:intergenic
GATACAATGATGTGTGATGA+AGG 0.510656 8_4:+15535985 Msa1315940:CDS
TACCCCTAATCCTAATGTTA+CGG 0.516176 8_4:-15536414 None:intergenic
TATTTACCTGGTAATTCCCA+TGG 0.526381 8_4:-15536186 None:intergenic
AAGAAGAATGGGAGGAAATG+AGG 0.527793 8_4:-15536031 None:intergenic
ACAGGAGGAACAAGAAGAAT+GGG 0.530636 8_4:-15536042 None:intergenic
ATCATGAATGAGAGGAAATG+AGG 0.537863 8_4:-15534447 None:intergenic
CTAACTCTTGATCTGTTGGA+CGG 0.541447 8_4:-15534493 None:intergenic
AAGTATTTGTCTGCTTGGAA+AGG 0.542716 8_4:-15537692 None:intergenic
GAGGCTGTCATCTGTCTGCT+AGG 0.546013 8_4:-15536012 None:intergenic
TATTTACCTGGTAAATCCCA+AGG 0.549546 8_4:-15534602 None:intergenic
TATAAACCTTGGGATTTACC+AGG 0.558233 8_4:+15534596 Msa1315940:CDS
TCTCAGCTTTCTTAATCAAG+CGG 0.558377 8_4:-15537404 None:intergenic
ATGTATTCAAGTATAAACCT+TGG 0.563533 8_4:+15534585 Msa1315940:CDS
TATTCGCAAGTTCAAACCAT+GGG 0.566424 8_4:+15536170 Msa1315940:CDS
CACGTTTGCAACTGTCGAAG+AGG 0.568050 8_4:+15537826 Msa1315940:CDS
ACAAACCTGGGGATCATCAA+AGG 0.569657 8_4:-15536536 None:intergenic
GGTATGATTGTATGTGATGA+AGG 0.581248 8_4:+15537447 Msa1315940:CDS
ATCCAATTGGTCTTAACACC+AGG 0.586994 8_4:-15536490 None:intergenic
GGAAGAACATCATGAATGAG+AGG 0.590042 8_4:-15534455 None:intergenic
TAACACCAGGATGAGGAGCA+AGG 0.599024 8_4:-15534885 None:intergenic
AGTGATAAGATCCGATGACT+CGG 0.614494 8_4:+15534702 Msa1315940:CDS
TTCAAACCATGGGAATTACC+AGG 0.614951 8_4:+15536180 Msa1315940:CDS
AGCCGAGATAAAAGGCGAAG+AGG 0.620211 8_4:+15535957 Msa1315940:intron
TAAGATCCGATGACTCGGAA+TGG 0.622462 8_4:+15534707 Msa1315940:CDS
GGAGGAACAAGAAGAATGGG+AGG 0.625065 8_4:-15536039 None:intergenic
ATACAATGATGTGTGATGAA+GGG 0.629056 8_4:+15535986 Msa1315940:CDS
TACAATGATGTGTGATGAAG+GGG 0.629065 8_4:+15535987 Msa1315940:CDS
TCCTGGTGTTAAAACCAACT+GGG 0.630000 8_4:+15534897 Msa1315940:CDS
TAAAGTCTGATGATCCGGAA+TGG 0.638005 8_4:+15536299 Msa1315940:intron
GAAAATCAAGAAACAGCTGA+AGG 0.641133 8_4:+15537501 Msa1315940:CDS
ATATTCGCAAGTTCAAACCA+TGG 0.650834 8_4:+15536169 Msa1315940:CDS
GACCGTAACATTAGGATTAG+GGG 0.672366 8_4:+15536412 Msa1315940:CDS
AACCTGGGGATCATCAAAGG+TGG 0.674073 8_4:-15536533 None:intergenic
GTACTCACGAATAACCCAGT+TGG 0.674708 8_4:-15534911 None:intergenic
CTTTGCCAGAAATAAATATG+GGG 0.689687 8_4:+15537654 Msa1315940:CDS
CAAAATCTGAATCCAACAGG+AGG 0.690195 8_4:-15536057 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATTATTATAAGAAAATAA+TGG - chr8_4:15534642-15534661 None:intergenic 10.0%
!! TATTATAAGAAAATAATGGT+GGG - chr8_4:15534638-15534657 None:intergenic 15.0%
!! TTATTATAAGAAAATAATGG+TGG - chr8_4:15534639-15534658 None:intergenic 15.0%
!!! AGTTTTTTTTTTCCTTTTTA+AGG + chr8_4:15535019-15535038 Msa1315940:intron 15.0%
!! AAAATATCAAATCCTTAAAA+AGG - chr8_4:15535034-15535053 None:intergenic 15.0%
!!! TGTTTTGAAATTTTGATTTT+TGG + chr8_4:15535097-15535116 Msa1315940:intron 15.0%
!! ATTATAAGAAAATAATGGTG+GGG - chr8_4:15534637-15534656 None:intergenic 20.0%
!!! TTTGATATTTTCTATCCAAT+TGG + chr8_4:15535043-15535062 Msa1315940:intron 20.0%
!! ATATGATACCAAAAGAAAAA+GGG - chr8_4:15535124-15535143 None:intergenic 20.0%
!! AATATGATACCAAAAGAAAA+AGG - chr8_4:15535125-15535144 None:intergenic 20.0%
!!! CTTTTGGTATCATATTATAT+TGG + chr8_4:15535129-15535148 Msa1315940:intron 20.0%
!!! TCTTTTTCTTTTTTTGACAT+AGG + chr8_4:15535307-15535326 Msa1315940:intron 20.0%
!!! ATTTTAAAACTATCTCAGAA+AGG - chr8_4:15535613-15535632 None:intergenic 20.0%
!!! TAGCATTTTCCTTAATAATA+AGG + chr8_4:15535848-15535867 Msa1315940:intron 20.0%
!! AAAAGGATACCTTATTATTA+AGG - chr8_4:15535860-15535879 None:intergenic 20.0%
!!! GTTTGTTTTATATATTTACC+TGG - chr8_4:15536201-15536220 None:intergenic 20.0%
!!! TTTTGTGTCAAAATTATGAT+GGG - chr8_4:15536232-15536251 None:intergenic 20.0%
!!! TTTTTGTGTCAAAATTATGA+TGG - chr8_4:15536233-15536252 None:intergenic 20.0%
!! TTTGCATACTTGTATTTAAT+AGG - chr8_4:15536337-15536356 None:intergenic 20.0%
!! ATTAATAGGACAACAAAAAA+TGG + chr8_4:15536367-15536386 Msa1315940:CDS 20.0%
!! TGATATATTTCTTATCTGAT+AGG + chr8_4:15536674-15536693 Msa1315940:intron 20.0%
!!! CATTTTATAATGTCTCATAT+TGG - chr8_4:15537343-15537362 None:intergenic 20.0%
!! TAATTTGAAAATTCATGTCA+AGG - chr8_4:15537550-15537569 None:intergenic 20.0%
!!! ACTTGTTTTATATTTCTTTC+AGG + chr8_4:15537622-15537641 Msa1315940:intron 20.0%
!!! ATTGTTGTCGTTTTTTAAAT+AGG - chr8_4:15537795-15537814 None:intergenic 20.0%
!!! GTGATTTTCTTTTATAGATT+AGG + chr8_4:15538247-15538266 Msa1315940:intron 20.0%
!!! AATGTGAATCTTTGATTTAA+AGG + chr8_4:15538356-15538375 Msa1315940:intron 20.0%
!!! ATGTGAATCTTTGATTTAAA+GGG + chr8_4:15538357-15538376 Msa1315940:intron 20.0%
! ATGTATTCAAGTATAAACCT+TGG + chr8_4:15534585-15534604 Msa1315940:CDS 25.0%
! TGTATTCAAGTATAAACCTT+GGG + chr8_4:15534586-15534605 Msa1315940:CDS 25.0%
! TTTGCATACTTGTATTCAAT+AGG - chr8_4:15534745-15534764 None:intergenic 25.0%
!! AGATGAAGTTTTTGATGAAA+AGG + chr8_4:15535208-15535227 Msa1315940:intron 25.0%
!! GATGAAGTTTTTGATGAAAA+GGG + chr8_4:15535209-15535228 Msa1315940:intron 25.0%
!!! TGATAAAGAGTGATTTTGAT+TGG - chr8_4:15535249-15535268 None:intergenic 25.0%
! AATCAAAATCACTCTTTATC+AGG + chr8_4:15535248-15535267 Msa1315940:intron 25.0%
!! AATATTGATTATCAACTCTG+AGG + chr8_4:15535371-15535390 Msa1315940:intron 25.0%
! TTAAAAGAGACAATTGGAAA+AGG - chr8_4:15535877-15535896 None:intergenic 25.0%
! CAACATTTAAAAGAGACAAT+TGG - chr8_4:15535883-15535902 None:intergenic 25.0%
!! AAAAGTCCTCTACAAAATTT+TGG - chr8_4:15535914-15535933 None:intergenic 25.0%
! CAAAGAGTAAAAGGATTAAT+AGG + chr8_4:15536353-15536372 Msa1315940:CDS 25.0%
! CTTAATCCCAATAACTTTAT+TGG - chr8_4:15536440-15536459 None:intergenic 25.0%
! TAATGTAACAAAACAAACCT+GGG - chr8_4:15536551-15536570 None:intergenic 25.0%
!!! AGGTTTGTTTTGTTACATTA+CGG + chr8_4:15536551-15536570 Msa1315940:intron 25.0%
!!! TATATGTGTTTTTTCCTTTC+AGG + chr8_4:15536648-15536667 Msa1315940:intron 25.0%
! GAAATATATCAAATCCTGAA+AGG - chr8_4:15536665-15536684 None:intergenic 25.0%
!!! TTCTGAAATTTGAAGATGTT+TGG + chr8_4:15536700-15536719 Msa1315940:intron 25.0%
! AACAAAGAAATCTCAGATAT+TGG + chr8_4:15536804-15536823 Msa1315940:intron 25.0%
!!! CTAAACTGAAAGTTAGTTTT+AGG + chr8_4:15536837-15536856 Msa1315940:intron 25.0%
!!! CTCAAATTGGTTTTGTTTTA+TGG + chr8_4:15537041-15537060 Msa1315940:intron 25.0%
! CAGAAAAAACTAAAAAAGAG+TGG - chr8_4:15537167-15537186 None:intergenic 25.0%
!!! AATTTCAGATTTTGAAGCAT+TGG + chr8_4:15537202-15537221 Msa1315940:intron 25.0%
! TTCAAATTAAAACGAAGTCT+TGG + chr8_4:15537561-15537580 Msa1315940:intron 25.0%
!! TTATATTTCTTTCAGGTAAG+TGG + chr8_4:15537629-15537648 Msa1315940:intron 25.0%
! ACTTTGCCAGAAATAAATAT+GGG + chr8_4:15537653-15537672 Msa1315940:CDS 25.0%
! AAATATTTACTTCAGAGAGT+GGG - chr8_4:15537958-15537977 None:intergenic 25.0%
! TAAATATTTACTTCAGAGAG+TGG - chr8_4:15537959-15537978 None:intergenic 25.0%
! TATTTACAATATGCACAAGT+CGG - chr8_4:15538054-15538073 None:intergenic 25.0%
TTTACTAACTCTTGATCTGT+TGG - chr8_4:15534500-15534519 None:intergenic 30.0%
TATCTCAGAAACAAGTTACT+TGG + chr8_4:15534524-15534543 Msa1315940:CDS 30.0%
GATCATTCGATTAAGAATAG+AGG + chr8_4:15534820-15534839 Msa1315940:CDS 30.0%
! CAGATTTGATGATAATACAC+AGG + chr8_4:15534951-15534970 Msa1315940:intron 30.0%
CATATTTCAGAACAACCAAT+TGG - chr8_4:15535061-15535080 None:intergenic 30.0%
!! ATTGGTTGTTCTGAAATATG+AGG + chr8_4:15535061-15535080 Msa1315940:intron 30.0%
!! GTTCTGAAATATGAGGATAT+TGG + chr8_4:15535068-15535087 Msa1315940:intron 30.0%
! TTTTTGGACCCTTTTTCTTT+TGG + chr8_4:15535113-15535132 Msa1315940:intron 30.0%
!!! GACATAGGATTGATTTGTTT+TGG + chr8_4:15535322-15535341 Msa1315940:intron 30.0%
TTTCATGTACTCACACATTT+GGG - chr8_4:15535543-15535562 None:intergenic 30.0%
! TTTTCATGTACTCACACATT+TGG - chr8_4:15535544-15535563 None:intergenic 30.0%
!! CACAGTTGGCAAATTTTAAT+CGG - chr8_4:15535792-15535811 None:intergenic 30.0%
!!! AGAATTTTTCAAGACACAGT+TGG - chr8_4:15535806-15535825 None:intergenic 30.0%
! TATGCTCCAAAATTTTGTAG+AGG + chr8_4:15535905-15535924 Msa1315940:intron 30.0%
ATGAAAAAAGCCGAGATAAA+AGG + chr8_4:15535949-15535968 Msa1315940:intron 30.0%
ATACAATGATGTGTGATGAA+GGG + chr8_4:15535986-15536005 Msa1315940:CDS 30.0%
ACAAGTATGCAAAGAGTAAA+AGG + chr8_4:15536344-15536363 Msa1315940:CDS 30.0%
! GGACAACAAAAAATGGTTTT+TGG + chr8_4:15536374-15536393 Msa1315940:CDS 30.0%
ATACTCATGAATGATCCAAT+TGG - chr8_4:15536506-15536525 None:intergenic 30.0%
AATGTAACAAAACAAACCTG+GGG - chr8_4:15536550-15536569 None:intergenic 30.0%
GTAATGTAACAAAACAAACC+TGG - chr8_4:15536552-15536571 None:intergenic 30.0%
!!! TTTTGAACCGCTTTTTCTTT+TGG + chr8_4:15536744-15536763 Msa1315940:intron 30.0%
TATGACACCAAAAGAAAAAG+CGG - chr8_4:15536754-15536773 None:intergenic 30.0%
TTTCTTTGTTCATTTCTCTC+TGG - chr8_4:15536794-15536813 None:intergenic 30.0%
AGTTCAAAGTCAGTTATAAC+TGG - chr8_4:15536913-15536932 None:intergenic 30.0%
!! GACTTTGAACTAGCTTATTT+TGG + chr8_4:15536922-15536941 Msa1315940:intron 30.0%
GGATATTACTAGTAAACAAC+AGG - chr8_4:15536998-15537017 None:intergenic 30.0%
TCCTCTTATACATATTCTAC+TGG + chr8_4:15537015-15537034 Msa1315940:intron 30.0%
ACCAGTAGAATATGTATAAG+AGG - chr8_4:15537019-15537038 None:intergenic 30.0%
!! ATTCTACTGGTTTCTCAAAT+TGG + chr8_4:15537028-15537047 Msa1315940:intron 30.0%
ATAGCAAAAAAAGACAGTGA+TGG - chr8_4:15537073-15537092 None:intergenic 30.0%
AAACTAAAAAAGAGTGGCTT+TGG - chr8_4:15537161-15537180 None:intergenic 30.0%
AATTCTTATCATGCATCTCA+TGG - chr8_4:15537288-15537307 None:intergenic 30.0%
AGAATTTCACTTTGTAACCT+CGG + chr8_4:15537302-15537321 Msa1315940:intron 30.0%
! TTATCCTCCAAATTTTGTAG+AGG + chr8_4:15537367-15537386 Msa1315940:intron 30.0%
CAAAAGTCCTCTACAAAATT+TGG - chr8_4:15535915-15535934 None:intergenic 30.0%
AGCTGAGAAAAAAATTGAAG+AGG + chr8_4:15537419-15537438 Msa1315940:CDS 30.0%
AAAAAAATTGAAGAGGAAGC+TGG + chr8_4:15537426-15537445 Msa1315940:CDS 30.0%
CACTTTGCCAGAAATAAATA+TGG + chr8_4:15537652-15537671 Msa1315940:CDS 30.0%
CTTTGCCAGAAATAAATATG+GGG + chr8_4:15537654-15537673 Msa1315940:CDS 30.0%
ATTGACCCCATATTTATTTC+TGG - chr8_4:15537662-15537681 None:intergenic 30.0%
ACTCAACAATCTTCAATCAA+TGG + chr8_4:15537725-15537744 Msa1315940:CDS 30.0%
! CAATTCGATGTTTGTTAATG+CGG + chr8_4:15537862-15537881 Msa1315940:intron 30.0%
AGTACTTGAATGAAATGTCT+AGG + chr8_4:15538275-15538294 Msa1315940:intron 30.0%
CTCCTCAAGAATAATAGAAA+GGG + chr8_4:15538391-15538410 Msa1315940:intron 30.0%
TCCTCAAGAATAATAGAAAG+GGG + chr8_4:15538392-15538411 Msa1315940:intron 30.0%
ATCATGAATGAGAGGAAATG+AGG - chr8_4:15534450-15534469 None:intergenic 35.0%
ATTCATGATGTTCTTCCTGT+TGG + chr8_4:15534461-15534480 Msa1315940:CDS 35.0%
TATAAACCTTGGGATTTACC+AGG + chr8_4:15534596-15534615 Msa1315940:CDS 35.0%
TATTTACCTGGTAAATCCCA+AGG - chr8_4:15534605-15534624 None:intergenic 35.0%
! GGGTTTGTTTGATATTTACC+TGG - chr8_4:15534617-15534636 None:intergenic 35.0%
ACTGAATGAGCTGAAAAAGA+AGG - chr8_4:15534685-15534704 None:intergenic 35.0%
CTTAAGAGAGCAACAAAGTT+TGG + chr8_4:15534775-15534794 Msa1315940:CDS 35.0%
! GAGCAACAAAGTTTGGATTT+TGG + chr8_4:15534782-15534801 Msa1315940:CDS 35.0%
!! TTTGGATTTTGGAAAGCTAC+TGG + chr8_4:15534793-15534812 Msa1315940:CDS 35.0%
! ATTGAATTCCCTGCATTGAT+TGG + chr8_4:15535407-15535426 Msa1315940:intron 35.0%
!! TTGAATTCCCTGCATTGATT+GGG + chr8_4:15535408-15535427 Msa1315940:intron 35.0%
GATACAATGATGTGTGATGA+AGG + chr8_4:15535985-15536004 Msa1315940:CDS 35.0%
TACAATGATGTGTGATGAAG+GGG + chr8_4:15535987-15536006 Msa1315940:CDS 35.0%
ATATTCGCAAGTTCAAACCA+TGG + chr8_4:15536169-15536188 Msa1315940:CDS 35.0%
TATTCGCAAGTTCAAACCAT+GGG + chr8_4:15536170-15536189 Msa1315940:CDS 35.0%
TATTTACCTGGTAATTCCCA+TGG - chr8_4:15536189-15536208 None:intergenic 35.0%
AGTGATAAAGTCTGATGATC+CGG + chr8_4:15536294-15536313 Msa1315940:intron 35.0%
TACCCCTAATCCTAATGTTA+CGG - chr8_4:15536417-15536436 None:intergenic 35.0%
!! AGGGGTACCAATAAAGTTAT+TGG + chr8_4:15536430-15536449 Msa1315940:CDS 35.0%
! GGGGTACCAATAAAGTTATT+GGG + chr8_4:15536431-15536450 Msa1315940:CDS 35.0%
!!! TCTTTTGGTGTCATATTGTG+AGG + chr8_4:15536759-15536778 Msa1315940:intron 35.0%
ATATACAAGTGAACAGAGCT+AGG + chr8_4:15536868-15536887 Msa1315940:intron 35.0%
!! TTTGAAGCATTGGCTTGATT+TGG + chr8_4:15537212-15537231 Msa1315940:intron 35.0%
GCATACACATAAATACCAAG+AGG - chr8_4:15537239-15537258 None:intergenic 35.0%
AAGTCCTCTACAAAATTTGG+AGG - chr8_4:15537374-15537393 None:intergenic 35.0%
TCTCAGCTTTCTTAATCAAG+CGG - chr8_4:15537407-15537426 None:intergenic 35.0%
GGTATGATTGTATGTGATGA+AGG + chr8_4:15537447-15537466 Msa1315940:CDS 35.0%
GAAAATCAAGAAACAGCTGA+AGG + chr8_4:15537501-15537520 Msa1315940:CDS 35.0%
!!! TGGTTTTATACCTTTCCACA+TGG + chr8_4:15537581-15537600 Msa1315940:intron 35.0%
AAATATGGGGTCAATGTTTG+AGG + chr8_4:15537667-15537686 Msa1315940:CDS 35.0%
AAGTATTTGTCTGCTTGGAA+AGG - chr8_4:15537695-15537714 None:intergenic 35.0%
GAAGATTGTTGAGTAGAGAA+GGG - chr8_4:15537719-15537738 None:intergenic 35.0%
TGAAGATTGTTGAGTAGAGA+AGG - chr8_4:15537720-15537739 None:intergenic 35.0%
TTCAATCAATGGAAATGAGC+CGG + chr8_4:15537736-15537755 Msa1315940:CDS 35.0%
GAGTTCGAGAATAATAGTTC+CGG - chr8_4:15537758-15537777 None:intergenic 35.0%
!! ACAGACTTGTTGGAATTGAT+TGG - chr8_4:15538163-15538182 None:intergenic 35.0%
ACAAATGGAAACAGACTTGT+TGG - chr8_4:15538173-15538192 None:intergenic 35.0%
ATGGATGGTTCACAAACAAA+TGG - chr8_4:15538188-15538207 None:intergenic 35.0%
TGTTTGTGAACCATCCATTA+TGG + chr8_4:15538190-15538209 Msa1315940:intron 35.0%
! ACTCATGTTACCATAATGGA+TGG - chr8_4:15538203-15538222 None:intergenic 35.0%
CAACACTCATGTTACCATAA+TGG - chr8_4:15538207-15538226 None:intergenic 35.0%
ACTCATAACTGACAGTTTGA+TGG + chr8_4:15538330-15538349 Msa1315940:intron 35.0%
CCTTTCTATTATTCTTGAGG+AGG - chr8_4:15538393-15538412 None:intergenic 35.0%
CCTCCTCAAGAATAATAGAA+AGG + chr8_4:15538390-15538409 Msa1315940:intron 35.0%
TCCCCTTTCTATTATTCTTG+AGG - chr8_4:15538396-15538415 None:intergenic 35.0%
GGAAGAACATCATGAATGAG+AGG - chr8_4:15534458-15534477 None:intergenic 40.0%
CTAACTCTTGATCTGTTGGA+CGG - chr8_4:15534496-15534515 None:intergenic 40.0%
AGTGATAAGATCCGATGACT+CGG + chr8_4:15534702-15534721 Msa1315940:CDS 40.0%
GAAAAACCATTCCGAGTCAT+CGG - chr8_4:15534716-15534735 None:intergenic 40.0%
!! AGAGGTACTGACGAAGTTAT+TGG + chr8_4:15534838-15534857 Msa1315940:CDS 40.0%
!! GAGGTACTGACGAAGTTATT+GGG + chr8_4:15534839-15534858 Msa1315940:CDS 40.0%
!!! TTGGTTTTAACACCAGGATG+AGG - chr8_4:15534895-15534914 None:intergenic 40.0%
! ATCCTGGTGTTAAAACCAAC+TGG + chr8_4:15534896-15534915 Msa1315940:CDS 40.0%
! TCCTGGTGTTAAAACCAACT+GGG + chr8_4:15534897-15534916 Msa1315940:CDS 40.0%
ATCTGACACTGACAACATCA+TGG - chr8_4:15534936-15534955 None:intergenic 40.0%
! CATGCATTTGAGACATCGAT+CGG + chr8_4:15535433-15535452 Msa1315940:intron 40.0%
! ACATTTGGGACGAACATGAT+CGG - chr8_4:15535529-15535548 None:intergenic 40.0%
GGCAAATAGTGCATTGTGAT+TGG - chr8_4:15535719-15535738 None:intergenic 40.0%
GCACTATTTGCCACAATTCA+AGG + chr8_4:15535727-15535746 Msa1315940:intron 40.0%
CTATTTGCCACAATTCAAGG+AGG + chr8_4:15535730-15535749 Msa1315940:intron 40.0%
TGTGGCTGAAAAATAGGAAG+TGG + chr8_4:15535753-15535772 Msa1315940:intron 40.0%
! TTCCTCTTCGCCTTTTATCT+CGG - chr8_4:15535962-15535981 None:intergenic 40.0%
AAGAAGAATGGGAGGAAATG+AGG - chr8_4:15536034-15536053 None:intergenic 40.0%
ACAGGAGGAACAAGAAGAAT+GGG - chr8_4:15536045-15536064 None:intergenic 40.0%
AACAGGAGGAACAAGAAGAA+TGG - chr8_4:15536046-15536065 None:intergenic 40.0%
ATTCTTCTTGTTCCTCCTGT+TGG + chr8_4:15536045-15536064 Msa1315940:CDS 40.0%
CAAAATCTGAATCCAACAGG+AGG - chr8_4:15536060-15536079 None:intergenic 40.0%
GGACAAAATCTGAATCCAAC+AGG - chr8_4:15536063-15536082 None:intergenic 40.0%
! CTGATTAGCTCTTCATCTGT+TGG - chr8_4:15536084-15536103 None:intergenic 40.0%
TACCTTAGAAACGAGTTGCT+TGG + chr8_4:15536108-15536127 Msa1315940:CDS 40.0%
TACCAAGCAACTCGTTTCTA+AGG - chr8_4:15536113-15536132 None:intergenic 40.0%
TTCAAACCATGGGAATTACC+AGG + chr8_4:15536180-15536199 Msa1315940:CDS 40.0%
TAAAGTCTGATGATCCGGAA+TGG + chr8_4:15536299-15536318 Msa1315940:intron 40.0%
GGACACAAGAAAAACCATTC+CGG - chr8_4:15534724-15534743 None:intergenic 40.0%
!! AATGGTTTTTGGAAAGCGAC+TGG + chr8_4:15536385-15536404 Msa1315940:CDS 40.0%
!! TTTTTGGAAAGCGACTGGAA+TGG + chr8_4:15536390-15536409 Msa1315940:CDS 40.0%
TGGACCGTAACATTAGGATT+AGG + chr8_4:15536410-15536429 Msa1315940:CDS 40.0%
GGACCGTAACATTAGGATTA+GGG + chr8_4:15536411-15536430 Msa1315940:CDS 40.0%
GACCGTAACATTAGGATTAG+GGG + chr8_4:15536412-15536431 Msa1315940:CDS 40.0%
TACCATGAAAATCCTGTTCC+TGG + chr8_4:15536472-15536491 Msa1315940:CDS 40.0%
! TTCCTGGTGTTAAGACCAAT+TGG + chr8_4:15536488-15536507 Msa1315940:CDS 40.0%
!! ATCCAATTGGTCTTAACACC+AGG - chr8_4:15536493-15536512 None:intergenic 40.0%
!! AGGGAAAGTATTTGTCTGCT+TGG - chr8_4:15537700-15537719 None:intergenic 40.0%
TTTACTTCAGAGAGTGGGAT+AGG - chr8_4:15537953-15537972 None:intergenic 40.0%
AGTATGTTAAAGGAAGAGGG+AGG - chr8_4:15538106-15538125 None:intergenic 40.0%
CCGAGTATGTTAAAGGAAGA+GGG - chr8_4:15538109-15538128 None:intergenic 40.0%
CCCTCTTCCTTTAACATACT+CGG + chr8_4:15538106-15538125 Msa1315940:intron 40.0%
ACCGAGTATGTTAAAGGAAG+AGG - chr8_4:15538110-15538129 None:intergenic 40.0%
CACATCACCGAGTATGTTAA+AGG - chr8_4:15538116-15538135 None:intergenic 40.0%
! TTGCCACATTTTTGCAATGC+AGG + chr8_4:15538224-15538243 Msa1315940:intron 40.0%
! TGCCACATTTTTGCAATGCA+GGG + chr8_4:15538225-15538244 Msa1315940:intron 40.0%
! TAAGATCCGATGACTCGGAA+TGG + chr8_4:15534707-15534726 Msa1315940:CDS 45.0%
!!! ACCCAGTTGGTTTTAACACC+AGG - chr8_4:15534901-15534920 None:intergenic 45.0%
GTACTCACGAATAACCCAGT+TGG - chr8_4:15534914-15534933 None:intergenic 45.0%
GCATGAACCCAATCAATGCA+GGG - chr8_4:15535418-15535437 None:intergenic 45.0%
TGCATGAACCCAATCAATGC+AGG - chr8_4:15535419-15535438 None:intergenic 45.0%
! AGGAGGTGTGGCTGAAAAAT+AGG + chr8_4:15535747-15535766 Msa1315940:intron 45.0%
CTGGAATGGACCGTAACATT+AGG + chr8_4:15536404-15536423 Msa1315940:CDS 45.0%
! CACCAGGAACAGGATTTTCA+TGG - chr8_4:15536477-15536496 None:intergenic 45.0%
!! TTGGTCTTAACACCAGGAAC+AGG - chr8_4:15536487-15536506 None:intergenic 45.0%
ACAAACCTGGGGATCATCAA+AGG - chr8_4:15536539-15536558 None:intergenic 45.0%
!! TTGGCTTGATTTGGACCTCT+TGG + chr8_4:15537221-15537240 Msa1315940:intron 45.0%
GGAATTAAACTCGAACTCCG+AGG - chr8_4:15537322-15537341 None:intergenic 45.0%
TCAGCATGTTCCATGTGGAA+AGG - chr8_4:15537594-15537613 None:intergenic 45.0%
AGTTCTCAGCATGTTCCATG+TGG - chr8_4:15537599-15537618 None:intergenic 45.0%
! GGTGATGTGAGACTTGTTCT+AGG + chr8_4:15538127-15538146 Msa1315940:intron 45.0%
CACCCTGCATTGCAAAAATG+TGG - chr8_4:15538230-15538249 None:intergenic 45.0%
GGACGGAATCTGAATCCAAC+AGG - chr8_4:15534479-15534498 None:intergenic 50.0%
TACTACCTTGCTCCTCATCC+TGG + chr8_4:15534880-15534899 Msa1315940:CDS 50.0%
TAACACCAGGATGAGGAGCA+AGG - chr8_4:15534888-15534907 None:intergenic 50.0%
ACATGAAAAGCCGACTGCAG+TGG + chr8_4:15535555-15535574 Msa1315940:intron 50.0%
TGCCACAATTCAAGGAGGTG+TGG + chr8_4:15535735-15535754 Msa1315940:intron 50.0%
AGCCACACCTCCTTGAATTG+TGG - chr8_4:15535740-15535759 None:intergenic 50.0%
AGCCGAGATAAAAGGCGAAG+AGG + chr8_4:15535957-15535976 Msa1315940:intron 50.0%
GGAGGAACAAGAAGAATGGG+AGG - chr8_4:15536042-15536061 None:intergenic 50.0%
AACCTGGGGATCATCAAAGG+TGG - chr8_4:15536536-15536555 None:intergenic 50.0%
GTGAACAGAGCTAGGTGACT+TGG + chr8_4:15536876-15536895 Msa1315940:intron 50.0%
CACGTTTGCAACTGTCGAAG+AGG + chr8_4:15537826-15537845 Msa1315940:CDS 50.0%
TCAGAGAGTGGGATAGGCTT+TGG - chr8_4:15537947-15537966 None:intergenic 50.0%
TGGAGCGAGCTCAGTGGTAA+GGG + chr8_4:15535575-15535594 Msa1315940:intron 55.0%
GAGGCTGTCATCTGTCTGCT+AGG - chr8_4:15536015-15536034 None:intergenic 55.0%
! TGCCACCTTTGATGATCCCC+AGG + chr8_4:15536531-15536550 Msa1315940:CDS 55.0%
CGACAGTTGCAAACGTGCTC+TGG - chr8_4:15537823-15537842 None:intergenic 55.0%
TGAGCTCGCTCCACTGCAGT+CGG - chr8_4:15535568-15535587 None:intergenic 60.0%
GTGGAGCGAGCTCAGTGGTA+AGG + chr8_4:15535574-15535593 Msa1315940:intron 60.0%
CTGCAGTGGAGCGAGCTCAG+TGG + chr8_4:15535569-15535588 Msa1315940:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 15534440 15538455 15534440 ID=Msa1315940;Name=Msa1315940
chr8_4 mRNA 15534440 15538455 15534440 ID=Msa1315940-mRNA-1;Parent=Msa1315940;Name=Msa1315940-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0|0|0.87|0.57|0.25|8|0|424
chr8_4 exon 15534440 15534617 15534440 ID=Msa1315940-mRNA-1:exon:5975;Parent=Msa1315940-mRNA-1
chr8_4 exon 15534695 15534925 15534695 ID=Msa1315940-mRNA-1:exon:5976;Parent=Msa1315940-mRNA-1
chr8_4 exon 15535959 15536201 15535959 ID=Msa1315940-mRNA-1:exon:5977;Parent=Msa1315940-mRNA-1
chr8_4 exon 15536287 15536294 15536287 ID=Msa1315940-mRNA-1:exon:5978;Parent=Msa1315940-mRNA-1
chr8_4 exon 15536304 15536552 15536304 ID=Msa1315940-mRNA-1:exon:5979;Parent=Msa1315940-mRNA-1
chr8_4 exon 15537387 15537533 15537387 ID=Msa1315940-mRNA-1:exon:5980;Parent=Msa1315940-mRNA-1
chr8_4 exon 15537644 15537855 15537644 ID=Msa1315940-mRNA-1:exon:5981;Parent=Msa1315940-mRNA-1
chr8_4 exon 15538449 15538455 15538449 ID=Msa1315940-mRNA-1:exon:5982;Parent=Msa1315940-mRNA-1
chr8_4 CDS 15534440 15534617 15534440 ID=Msa1315940-mRNA-1:cds;Parent=Msa1315940-mRNA-1
chr8_4 CDS 15534695 15534925 15534695 ID=Msa1315940-mRNA-1:cds;Parent=Msa1315940-mRNA-1
chr8_4 CDS 15535959 15536201 15535959 ID=Msa1315940-mRNA-1:cds;Parent=Msa1315940-mRNA-1
chr8_4 CDS 15536287 15536294 15536287 ID=Msa1315940-mRNA-1:cds;Parent=Msa1315940-mRNA-1
chr8_4 CDS 15536304 15536552 15536304 ID=Msa1315940-mRNA-1:cds;Parent=Msa1315940-mRNA-1
chr8_4 CDS 15537387 15537533 15537387 ID=Msa1315940-mRNA-1:cds;Parent=Msa1315940-mRNA-1
chr8_4 CDS 15537644 15537855 15537644 ID=Msa1315940-mRNA-1:cds;Parent=Msa1315940-mRNA-1
chr8_4 CDS 15538449 15538455 15538449 ID=Msa1315940-mRNA-1:cds;Parent=Msa1315940-mRNA-1
Gene Sequence

>Msa1315940

ATGACAACCTCATTTCCTCTCATTCATGATGTTCTTCCTGTTGGATTCAGATTCCGTCCAACAGATCAAGAGTTAGTAAACTACTATCTCAGAAACAAGTTACTTGGCAATGACGAGCTTGTTAACAATGCGATAGCTGAAGTTGATGTATTCAAGTATAAACCTTGGGATTTACCAGCTCATTCAGTGATAAGATCCGATGACTCGGAATGGTTTTTCTTGTGTCCTATTGAATACAAGTATGCAAAGAGCAATAAGCTTAAGAGAGCAACAAAGTTTGGATTTTGGAAAGCTACTGGAAAAGATCATTCGATTAAGAATAGAGGTACTGACGAAGTTATTGGGACGAAGAAGACACTTGTTTACTACCTTGCTCCTCATCCTGGTGTTAAAACCAACTGGGTTATTCCCGAGATAAAAGGCGAAGAGGAAAATGATACAATGATGTGTGATGAAGGGGAGCCTAGCAGACAGATGACAGCCTCATTTCCTCCCATTCTTCTTGTTCCTCCTGTTGGATTCAGATTTTGTCCAACAGATGAAGAGCTAATCAGTCACTACCTTAGAAACGAGTTGCTTGGTAATGACACAATTGTAAACAATGTTATAGCTGAAGTTGATATTCGCAAGTTCAAACCATGGGAATTACCAGCTCGTTCATCTGATGATCCGGAATGGTTTTTCTTGTGTCCTATTAAATACAAGTATGCAAAGAGTAAAAGGATTAATAGGACAACAAAAAATGGTTTTTGGAAAGCGACTGGAATGGACCGTAACATTAGGATTAGGGGTACCAATAAAGTTATTGGGATTAAGAAGACTCTTGTTTACCATGAAAATCCTGTTCCTGGTGTTAAGACCAATTGGATCATTCATGAGTATCATGATGCCACCTTTGATGATCCCCAGAGGACTTTTGTTTTGTGCCGCTTGATTAAGAAAGCTGAGAAAAAAATTGAAGAGGAAGCTGGTATGATTGTATGTGATGAAGGCGATTCTAGTAGACACATGAGTTCTGACTGCGAAAATCAAGAAACAGCTGAAGGAATTTCAGATGTAAGTGGCACTTTGCCAGAAATAAATATGGGGTCAATGTTTGAGGAACCTTTCCAAGCAGACAAATACTTTCCCTTCTCTACTCAACAATCTTCAATCAATGGAAATGAGCCGGAACTATTATTCTCGAACTCACAATTTTACGATGCCTATTTAAAAAACGACAACAATGTTATCCAGAGCACGTTTGCAACTGTCGAAGAGGAAAACAAATTGTGA
Protein sequence

>Msa1315940

MTTSFPLIHDVLPVGFRFRPTDQELVNYYLRNKLLGNDELVNNAIAEVDVFKYKPWDLPAHSVIRSDDSEWFFLCPIEYKYAKSNKLKRATKFGFWKATGKDHSIKNRGTDEVIGTKKTLVYYLAPHPGVKTNWVIPEIKGEEENDTMMCDEGEPSRQMTASFPPILLVPPVGFRFCPTDEELISHYLRNELLGNDTIVNNVIAEVDIRKFKPWELPARSSDDPEWFFLCPIKYKYAKSKRINRTTKNGFWKATGMDRNIRIRGTNKVIGIKKTLVYHENPVPGVKTNWIIHEYHDATFDDPQRTFVLCRLIKKAEKKIEEEAGMIVCDEGDSSRHMSSDCENQETAEGISDVSGTLPEINMGSMFEEPFQADKYFPFSTQQSSINGNEPELLFSNSQFYDAYLKNDNNVIQSTFATVEEENKL*