Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1316600 | XP_003603053.1 | 93.333 | 240 | 13 | 3 | 8 | 246 | 26 | 263 | 7.81e-153 | 439 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1316600 | sp|Q9SND4|HEC2_ARATH | 58.788 | 165 | 42 | 4 | 90 | 235 | 35 | 192 | 6.60e-44 | 153 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1316600 | G7J6E7 | 93.333 | 240 | 13 | 3 | 8 | 246 | 26 | 263 | 3.73e-153 | 439 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1316600 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1316600 | MtrunA17_Chr3g0134001 | 93.333 | 240 | 13 | 3 | 8 | 246 | 26 | 263 | 7.18e-157 | 439 |
| Msa1316600 | MtrunA17_Chr8g0375121 | 56.650 | 203 | 57 | 7 | 28 | 227 | 28 | 202 | 1.85e-50 | 168 |
| Msa1316600 | MtrunA17_Chr5g0402161 | 61.677 | 167 | 55 | 4 | 73 | 238 | 56 | 214 | 1.10e-47 | 160 |
| Msa1316600 | MtrunA17_Chr8g0384141 | 76.923 | 91 | 21 | 0 | 128 | 218 | 87 | 177 | 5.58e-46 | 157 |
| Msa1316600 | MtrunA17_Chr2g0330641 | 63.441 | 93 | 33 | 1 | 127 | 218 | 261 | 353 | 1.06e-26 | 108 |
| Msa1316600 | MtrunA17_Chr8g0341421 | 55.769 | 104 | 42 | 1 | 127 | 226 | 296 | 399 | 2.23e-26 | 108 |
| Msa1316600 | MtrunA17_Chr7g0243041 | 70.370 | 54 | 16 | 0 | 161 | 214 | 32 | 85 | 1.71e-21 | 89.4 |
| Msa1316600 | MtrunA17_Chr5g0435021 | 64.286 | 56 | 20 | 0 | 162 | 217 | 225 | 280 | 1.48e-18 | 84.7 |
| Msa1316600 | MtrunA17_Chr1g0207311 | 45.679 | 81 | 44 | 0 | 164 | 244 | 205 | 285 | 1.62e-17 | 81.3 |
| Msa1316600 | MtrunA17_Chr1g0152651 | 62.963 | 54 | 20 | 0 | 164 | 217 | 283 | 336 | 2.15e-17 | 82.0 |
| Msa1316600 | MtrunA17_Chr5g0393721 | 46.154 | 78 | 42 | 0 | 164 | 241 | 233 | 310 | 4.48e-17 | 80.9 |
| Msa1316600 | MtrunA17_Chr1g0207301 | 52.239 | 67 | 32 | 0 | 151 | 217 | 284 | 350 | 7.56e-17 | 80.5 |
| Msa1316600 | MtrunA17_Chr3g0134741 | 53.968 | 63 | 29 | 0 | 155 | 217 | 229 | 291 | 1.11e-15 | 76.6 |
| Msa1316600 | MtrunA17_Chr4g0074161 | 53.030 | 66 | 30 | 1 | 162 | 226 | 213 | 278 | 1.59e-14 | 73.9 |
| Msa1316600 | MtrunA17_Chr1g0190731 | 45.000 | 80 | 43 | 1 | 148 | 226 | 186 | 265 | 4.52e-14 | 72.0 |
| Msa1316600 | MtrunA17_Chr1g0179061 | 47.059 | 68 | 36 | 0 | 151 | 218 | 166 | 233 | 1.28e-12 | 66.6 |
| Msa1316600 | MtrunA17_Chr2g0311101 | 47.368 | 76 | 33 | 1 | 150 | 218 | 157 | 232 | 2.06e-12 | 67.0 |
| Msa1316600 | MtrunA17_Chr4g0014771 | 54.386 | 57 | 25 | 1 | 165 | 220 | 128 | 184 | 8.34e-12 | 63.5 |
| Msa1316600 | MtrunA17_Chr2g0323091 | 51.852 | 54 | 26 | 0 | 165 | 218 | 146 | 199 | 1.29e-11 | 64.3 |
| Msa1316600 | MtrunA17_Chr4g0044271 | 87.879 | 33 | 4 | 0 | 246 | 278 | 53 | 85 | 5.07e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1316600 | AT3G50330.1 | 58.788 | 165 | 42 | 4 | 90 | 235 | 35 | 192 | 6.71e-45 | 153 |
| Msa1316600 | AT5G67060.2 | 87.234 | 94 | 12 | 0 | 128 | 221 | 83 | 176 | 7.52e-45 | 153 |
| Msa1316600 | AT5G67060.1 | 87.234 | 94 | 12 | 0 | 128 | 221 | 95 | 188 | 8.42e-45 | 153 |
| Msa1316600 | AT4G00120.1 | 69.663 | 89 | 27 | 0 | 130 | 218 | 87 | 175 | 1.71e-36 | 130 |
| Msa1316600 | AT3G21330.1 | 56.303 | 119 | 43 | 2 | 127 | 242 | 241 | 353 | 4.61e-36 | 134 |
| Msa1316600 | AT5G09750.1 | 75.556 | 90 | 22 | 0 | 128 | 217 | 92 | 181 | 1.87e-33 | 123 |
| Msa1316600 | AT5G01305.1 | 69.492 | 59 | 18 | 0 | 156 | 214 | 38 | 96 | 4.62e-21 | 89.0 |
| Msa1316600 | AT5G43175.1 | 50.725 | 69 | 34 | 0 | 149 | 217 | 126 | 194 | 3.35e-18 | 82.4 |
| Msa1316600 | AT4G33880.1 | 64.815 | 54 | 19 | 0 | 164 | 217 | 275 | 328 | 5.61e-18 | 84.0 |
| Msa1316600 | AT5G37800.1 | 53.333 | 75 | 28 | 1 | 150 | 217 | 189 | 263 | 1.43e-17 | 82.0 |
| Msa1316600 | AT1G66470.1 | 63.636 | 55 | 20 | 0 | 163 | 217 | 203 | 257 | 1.70e-17 | 82.0 |
| Msa1316600 | AT1G27740.1 | 52.941 | 68 | 32 | 0 | 150 | 217 | 162 | 229 | 1.77e-17 | 81.3 |
| Msa1316600 | AT2G14760.1 | 62.963 | 54 | 20 | 0 | 164 | 217 | 246 | 299 | 5.35e-17 | 80.9 |
| Msa1316600 | AT4G30980.1 | 52.632 | 76 | 35 | 1 | 152 | 226 | 127 | 202 | 6.83e-16 | 77.4 |
| Msa1316600 | AT2G24260.2 | 57.812 | 64 | 26 | 1 | 164 | 226 | 44 | 107 | 1.16e-15 | 75.9 |
| Msa1316600 | AT4G30980.2 | 51.948 | 77 | 36 | 1 | 151 | 226 | 174 | 250 | 1.40e-15 | 77.0 |
| Msa1316600 | AT2G24260.1 | 56.061 | 66 | 28 | 1 | 162 | 226 | 145 | 210 | 3.07e-15 | 75.9 |
| Msa1316600 | AT5G58010.1 | 50.000 | 76 | 37 | 1 | 152 | 226 | 96 | 171 | 1.41e-14 | 73.6 |
| Msa1316600 | AT2G14760.3 | 50.746 | 67 | 20 | 1 | 164 | 217 | 246 | 312 | 9.24e-14 | 71.6 |
Find 76 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTCACGTTTCTTCTCTT+TGG | 0.198805 | 8_4:+17460986 | None:intergenic |
| GATGAAGACCATGGTATTAT+TGG | 0.220049 | 8_4:+17461283 | None:intergenic |
| AACAATGGTGGTGGTGTTTA+TGG | 0.230158 | 8_4:-17456422 | Msa1316600:CDS |
| ACAGTTGATGGTTCAGGATT+AGG | 0.252559 | 8_4:-17460761 | Msa1316600:CDS |
| TGTTGTTGTTGGAACCTTAA+TGG | 0.283073 | 8_4:+17461181 | None:intergenic |
| GATTCTGGGTCTATGTAAAT+TGG | 0.284997 | 8_4:+17461019 | None:intergenic |
| CCGTTAGATGAAGAAAATTC+AGG | 0.301231 | 8_4:+17461418 | None:intergenic |
| CAGTTGATGGTTCAGGATTA+GGG | 0.305766 | 8_4:-17460760 | Msa1316600:CDS |
| CTTCAGGAGCCAACAGTAAA+AGG | 0.313374 | 8_4:-17460784 | Msa1316600:CDS |
| GACCATGGTATTATTGGATT+AGG | 0.338106 | 8_4:+17461289 | None:intergenic |
| ACAACTCTACTGCACCATTA+AGG | 0.339069 | 8_4:-17461195 | Msa1316600:CDS |
| TCACTGCAGGAACGTGCTTC+AGG | 0.355705 | 8_4:-17460800 | Msa1316600:CDS |
| CCGTCAGATCAACAATTCTA+TGG | 0.368765 | 8_4:-17461367 | Msa1316600:CDS |
| GATTGTGTTTGTGTTTGTTA+TGG | 0.370441 | 8_4:+17461231 | None:intergenic |
| TAAGGCTTAGGCAATGAAAC+AGG | 0.373028 | 8_4:+17460734 | None:intergenic |
| CTCGAATTCGAAAACATTAA+CGG | 0.373336 | 8_4:+17461151 | None:intergenic |
| AAAAGGACAGTTGATGGTTC+AGG | 0.375534 | 8_4:-17460767 | Msa1316600:CDS |
| TGGTGCAGTAGAGTTGTTAT+TGG | 0.394604 | 8_4:+17461201 | None:intergenic |
| CCTCCGAATGCGAACCATTA+CGG | 0.398684 | 8_4:-17461118 | Msa1316600:CDS |
| TTCACGTTTCTTCTCTTTGG+TGG | 0.406987 | 8_4:+17460989 | None:intergenic |
| TGTAATCGAACACCACCTTA+TGG | 0.419872 | 8_4:-17456479 | Msa1316600:CDS |
| ACGGTGTTGTTTGTTGTTGT+TGG | 0.421243 | 8_4:+17461170 | None:intergenic |
| TCACCGCCGCCGCTGCCATA+AGG | 0.421417 | 8_4:+17456464 | None:intergenic |
| AGAGGGAACAAATCATCTTC+AGG | 0.427759 | 8_4:+17456386 | None:intergenic |
| CCACCAGCACCACCACAATC+TGG | 0.439432 | 8_4:-17456542 | Msa1316600:CDS |
| ATCGAGTTTCTCTTCTCTGA+TGG | 0.441629 | 8_4:+17461085 | None:intergenic |
| AAACTCGATGGCGGCGTTGA+GGG | 0.444275 | 8_4:-17461071 | Msa1316600:CDS |
| GTACCGTAATGGTTCGCATT+CGG | 0.446982 | 8_4:+17461115 | None:intergenic |
| TAAGGTGGTGTTCGATTACA+AGG | 0.465042 | 8_4:+17456482 | None:intergenic |
| CATGGTATTATTGGATTAGG+AGG | 0.465821 | 8_4:+17461292 | None:intergenic |
| AATCCAGATTGTGGTGGTGC+TGG | 0.476461 | 8_4:+17456539 | None:intergenic |
| TGACGGTTGAAATTGATTGA+TGG | 0.483851 | 8_4:+17461384 | None:intergenic |
| AACAGTAAAAGGACAGTTGA+TGG | 0.491037 | 8_4:-17460773 | Msa1316600:CDS |
| CGTTAGATGAAGAAAATTCA+GGG | 0.499125 | 8_4:+17461419 | None:intergenic |
| AATAAGAATACTGCAAAGAA+TGG | 0.517132 | 8_4:-17460906 | Msa1316600:CDS |
| GGTACCAGGTGGAACTAAGA+TGG | 0.521420 | 8_4:-17460885 | Msa1316600:CDS |
| AACAATAATAACAATGGTGG+TGG | 0.521587 | 8_4:-17456431 | Msa1316600:CDS |
| GGCAGCGGCGGCGGTGACGA+CGG | 0.521873 | 8_4:-17456458 | Msa1316600:CDS |
| CCAGATTGTGGTGGTGCTGG+TGG | 0.530126 | 8_4:+17456542 | None:intergenic |
| GGTAAGTGTTATTACCAGAT+GGG | 0.536021 | 8_4:+17456504 | None:intergenic |
| AAATCATCTTCAGGCTGTGG+TGG | 0.544780 | 8_4:+17456395 | None:intergenic |
| AACAAATCATCTTCAGGCTG+TGG | 0.550571 | 8_4:+17456392 | None:intergenic |
| GGGTAAGTGTTATTACCAGA+TGG | 0.553124 | 8_4:+17456503 | None:intergenic |
| ATGGAGATGCAGTACCGTAA+TGG | 0.553568 | 8_4:+17461104 | None:intergenic |
| GAAACTCGATGGCGGCGTTG+AGG | 0.556516 | 8_4:-17461072 | Msa1316600:CDS |
| TGTGTTTGTTATGGATTGTG+AGG | 0.557974 | 8_4:+17461240 | None:intergenic |
| TCAACATTACGACCTTGGTA+AGG | 0.559092 | 8_4:+17460716 | None:intergenic |
| GATGGATACTGCATCAATGT+TGG | 0.564818 | 8_4:-17460867 | Msa1316600:CDS |
| GTGTTTGTTATGGATTGTGA+GGG | 0.568107 | 8_4:+17461241 | None:intergenic |
| CCGTAATGGTTCGCATTCGG+AGG | 0.570332 | 8_4:+17461118 | None:intergenic |
| GACACAGCTTAAGTCACTGC+AGG | 0.580951 | 8_4:-17460813 | Msa1316600:CDS |
| TTACGACCTTGGTAAGGCTT+AGG | 0.584405 | 8_4:+17460722 | None:intergenic |
| ATGGTATTATTGGATTAGGA+GGG | 0.600791 | 8_4:+17461293 | None:intergenic |
| GGATATGGTAATCCAGATTG+TGG | 0.604452 | 8_4:+17456530 | None:intergenic |
| CTCCTAATCCAATAATACCA+TGG | 0.613375 | 8_4:-17461291 | Msa1316600:CDS |
| TGTCTAGCTGCTACACTCTG+AGG | 0.614013 | 8_4:+17460953 | None:intergenic |
| GTAAGTGTTATTACCAGATG+GGG | 0.614666 | 8_4:+17456505 | None:intergenic |
| AACAACAATAATAACAATGG+TGG | 0.626935 | 8_4:-17456434 | Msa1316600:CDS |
| CCATAGAATTGTTGATCTGA+CGG | 0.627985 | 8_4:+17461367 | None:intergenic |
| GGCAACAACAATAATAACAA+TGG | 0.633378 | 8_4:-17456437 | Msa1316600:CDS |
| TTATCTATTAAATCTACAAG+AGG | 0.640072 | 8_4:+17461316 | None:intergenic |
| ACACCACCTTATGGCAGCGG+CGG | 0.640859 | 8_4:-17456470 | Msa1316600:CDS |
| ATCAGAGAAGAGAAACTCGA+TGG | 0.641186 | 8_4:-17461083 | Msa1316600:CDS |
| GTATCCATCTTAGTTCCACC+TGG | 0.642640 | 8_4:+17460881 | None:intergenic |
| CGAACACCACCTTATGGCAG+CGG | 0.644484 | 8_4:-17456473 | Msa1316600:CDS |
| TCATTGCCTAAGCCTTACCA+AGG | 0.645634 | 8_4:-17460728 | Msa1316600:intron |
| AAGGCTTAGGCAATGAAACA+GGG | 0.655130 | 8_4:+17460735 | None:intergenic |
| TGTGTTGTGTAATATGCAAG+AGG | 0.660484 | 8_4:+17456368 | None:intergenic |
| ATACTGCAAAGAATGGTACC+AGG | 0.680757 | 8_4:-17460899 | Msa1316600:CDS |
| AGAGAAGAGAAACTCGATGG+CGG | 0.694059 | 8_4:-17461080 | Msa1316600:CDS |
| GTGTTGTGTAATATGCAAGA+GGG | 0.704621 | 8_4:+17456369 | None:intergenic |
| CTGCAAAGAATGGTACCAGG+TGG | 0.704915 | 8_4:-17460896 | Msa1316600:CDS |
| TATGGTAATCCAGATTGTGG+TGG | 0.719195 | 8_4:+17456533 | None:intergenic |
| TAAGTGTTATTACCAGATGG+GGG | 0.745447 | 8_4:+17456506 | None:intergenic |
| AAGGTGGTGTTCGATTACAA+GGG | 0.753458 | 8_4:+17456483 | None:intergenic |
| AATGATGAAGATGAAGACCA+TGG | 0.757666 | 8_4:+17461274 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTATATTATTTTTTATTT+TGG | - | chr8_4:17460448-17460467 | Msa1316600:intron | 0.0% |
| !! | AAAATAAAAAAATACGAAAT+TGG | + | chr8_4:17457419-17457438 | None:intergenic | 10.0% |
| !!! | ATTTCGTATTTTTTTATTTT+TGG | - | chr8_4:17457419-17457438 | Msa1316600:intron | 10.0% |
| !!! | GTGATATTATATTAATTTTA+AGG | - | chr8_4:17457574-17457593 | Msa1316600:intron | 10.0% |
| !! | GAAAAAATCATAAAAAATTT+CGG | - | chr8_4:17457848-17457867 | Msa1316600:intron | 10.0% |
| !! | AAAAAATCGTAAAAAAAAAA+TGG | - | chr8_4:17457917-17457936 | Msa1316600:intron | 10.0% |
| !! | AAAAATCGTAAAAAAAAAAT+GGG | - | chr8_4:17457918-17457937 | Msa1316600:intron | 10.0% |
| !!! | AGAAATTATTATTTTTTTGA+AGG | - | chr8_4:17458209-17458228 | Msa1316600:intron | 10.0% |
| !!! | ATTAATTAATTGTAATTTGT+GGG | + | chr8_4:17458607-17458626 | None:intergenic | 10.0% |
| !! | TATTAATTAATTGTAATTTG+TGG | + | chr8_4:17458608-17458627 | None:intergenic | 10.0% |
| !!! | ATAGTATCTAAAATAAAATT+TGG | - | chr8_4:17458893-17458912 | Msa1316600:intron | 10.0% |
| !! | AATATTTCTCTATAAAAAAA+AGG | - | chr8_4:17459139-17459158 | Msa1316600:intron | 10.0% |
| !!! | TTTCTTTTATGTTAAAATAT+AGG | - | chr8_4:17459826-17459845 | Msa1316600:intron | 10.0% |
| !! | GATATTAATTAAATAGTTAA+GGG | + | chr8_4:17459870-17459889 | None:intergenic | 10.0% |
| !! | CTTAACTATTTAATTAATAT+CGG | - | chr8_4:17459869-17459888 | Msa1316600:intron | 10.0% |
| !!! | AATAAATCAAATTTTAGTTA+GGG | + | chr8_4:17459994-17460013 | None:intergenic | 10.0% |
| !!! | AAATAAATCAAATTTTAGTT+AGG | + | chr8_4:17459993-17460012 | None:intergenic | 10.0% |
| !!! | AACTAAAATTTGATTTATTT+TGG | - | chr8_4:17459903-17459922 | Msa1316600:intron | 10.0% |
| !!! | AACTAAAATTTGATTTATTT+TGG | + | chr8_4:17459903-17459922 | None:intergenic | 10.0% |
| !!! | AAATAAATCAAATTTTAGTT+AGG | - | chr8_4:17459993-17460012 | Msa1316600:intron | 10.0% |
| !!! | AATAAATCAAATTTTAGTTA+GGG | - | chr8_4:17459994-17460013 | Msa1316600:intron | 10.0% |
| !!! | TAAATTTTACTTTTAAAAGA+AGG | + | chr8_4:17460086-17460105 | None:intergenic | 10.0% |
| !!! | AATTTATTTTTCTTAAATGA+TGG | + | chr8_4:17460229-17460248 | None:intergenic | 10.0% |
| !!! | CACATATTTTAATTTAATTT+TGG | - | chr8_4:17460294-17460313 | Msa1316600:intron | 10.0% |
| !!! | TTGTTTCATATTTTATAATA+GGG | - | chr8_4:17460318-17460337 | Msa1316600:intron | 10.0% |
| !! | TTTACTCAAAAATAAATAAA+AGG | - | chr8_4:17460685-17460704 | Msa1316600:intron | 10.0% |
| !! | AATTCAATTGATAAAAAAAA+TGG | - | chr8_4:17460720-17460739 | Msa1316600:intron | 10.0% |
| !! | ATTCAATTGATAAAAAAAAT+GGG | - | chr8_4:17460721-17460740 | Msa1316600:intron | 10.0% |
| !! | ACTAATATGTTATCAATAAA+TGG | - | chr8_4:17457341-17457360 | Msa1316600:intron | 15.0% |
| !! | AAATTGTAATTTAAAGATAG+AGG | - | chr8_4:17457534-17457553 | Msa1316600:intron | 15.0% |
| !!! | TTTTTTTTACGATTTTTTCT+CGG | + | chr8_4:17457915-17457934 | None:intergenic | 15.0% |
| !! | AAAATCGTAAAAAAAAAATG+GGG | - | chr8_4:17457919-17457938 | Msa1316600:intron | 15.0% |
| !! | TTCTATCAACATTAAAATTA+GGG | + | chr8_4:17458178-17458197 | None:intergenic | 15.0% |
| !! | ATTCTATCAACATTAAAATT+AGG | + | chr8_4:17458179-17458198 | None:intergenic | 15.0% |
| !!! | AATGTTGATAGAATAAATAA+TGG | - | chr8_4:17458185-17458204 | Msa1316600:intron | 15.0% |
| !!! | TTATTATTTTTTTGAAGGAA+TGG | - | chr8_4:17458214-17458233 | Msa1316600:intron | 15.0% |
| !! | ACAATTAATTAATATTTGTG+TGG | - | chr8_4:17458614-17458633 | Msa1316600:intron | 15.0% |
| !!! | AATACTAATTTTTTTTGGAA+AGG | + | chr8_4:17458644-17458663 | None:intergenic | 15.0% |
| !!! | ACACAAATACTAATTTTTTT+TGG | + | chr8_4:17458649-17458668 | None:intergenic | 15.0% |
| !!! | TTTTTCAAACTTTTAATCTT+TGG | - | chr8_4:17458770-17458789 | Msa1316600:intron | 15.0% |
| !!! | AAATTATCCATAATCTTTTA+AGG | + | chr8_4:17458810-17458829 | None:intergenic | 15.0% |
| !!! | TAATTGTTTTGAAAATAGTT+GGG | + | chr8_4:17458967-17458986 | None:intergenic | 15.0% |
| !!! | ATAATTGTTTTGAAAATAGT+TGG | + | chr8_4:17458968-17458987 | None:intergenic | 15.0% |
| !! | CGATATTAATTAAATAGTTA+AGG | + | chr8_4:17459871-17459890 | None:intergenic | 15.0% |
| !!! | ATAAATCAAATTTTAGTTAG+GGG | + | chr8_4:17459995-17460014 | None:intergenic | 15.0% |
| !!! | ATAAATCAAATTTTAGTTAG+GGG | - | chr8_4:17459995-17460014 | Msa1316600:intron | 15.0% |
| !! | CTATTTAATTAGTATCTATT+TGG | + | chr8_4:17460022-17460041 | None:intergenic | 15.0% |
| !! | AGATACTAATTAAATAGTTA+AGG | - | chr8_4:17460025-17460044 | Msa1316600:intron | 15.0% |
| !! | GATACTAATTAAATAGTTAA+GGG | - | chr8_4:17460026-17460045 | Msa1316600:intron | 15.0% |
| !!! | GTTGTTTCATATTTTATAAT+AGG | - | chr8_4:17460317-17460336 | Msa1316600:intron | 15.0% |
| !! | TTTGAAAAAAAATAGTATTG+CGG | + | chr8_4:17460425-17460444 | None:intergenic | 15.0% |
| !! | AAATGCAAAAAAATTATTGA+GGG | - | chr8_4:17460483-17460502 | Msa1316600:intron | 15.0% |
| !!! | TTTTCTAATATGTTTTGAAT+AGG | - | chr8_4:17460584-17460603 | Msa1316600:intron | 15.0% |
| !! | TTCAATTGATAAAAAAAATG+GGG | - | chr8_4:17460722-17460741 | Msa1316600:intron | 15.0% |
| !! | TTATCTATTAAATCTACAAG+AGG | + | chr8_4:17456469-17456488 | None:intergenic | 20.0% |
| !!! | GTGATAAATTTCATTGATTA+GGG | - | chr8_4:17457098-17457117 | Msa1316600:intron | 20.0% |
| !! | CTAGAATATTTGTCTTAATT+TGG | - | chr8_4:17457194-17457213 | Msa1316600:intron | 20.0% |
| !!! | GATTAAGAATTTAAGATGAA+TGG | + | chr8_4:17457291-17457310 | None:intergenic | 20.0% |
| !! | AAAAAATTACACTACAAAAG+AGG | + | chr8_4:17457390-17457409 | None:intergenic | 20.0% |
| !!! | ATTTTTGGTGAATTGTAATT+TGG | - | chr8_4:17457434-17457453 | Msa1316600:intron | 20.0% |
| !!! | TGGAAAAAAAAGTTTTTTGA+AGG | - | chr8_4:17457949-17457968 | Msa1316600:intron | 20.0% |
| !! | AAAACAAAAAAAAATAAGCC+AGG | - | chr8_4:17457974-17457993 | Msa1316600:intron | 20.0% |
| !! | AAACAAAAAAAAATAAGCCA+GGG | - | chr8_4:17457975-17457994 | Msa1316600:intron | 20.0% |
| !!! | AAAAAAAAAGGATTAGTGAT+TGG | - | chr8_4:17458100-17458119 | Msa1316600:intron | 20.0% |
| !!! | TAATTAACAAACATTTTTGC+AGG | - | chr8_4:17458418-17458437 | Msa1316600:intron | 20.0% |
| !! | TACATTACCTTAAAAGATTA+TGG | - | chr8_4:17458800-17458819 | Msa1316600:intron | 20.0% |
| !! | CAATTATCAATTTAGATGTT+TGG | - | chr8_4:17458981-17459000 | Msa1316600:intron | 20.0% |
| !!! | CATTCTATAAAAACCTTTTT+AGG | - | chr8_4:17459108-17459127 | Msa1316600:intron | 20.0% |
| !!! | ATATTGATTTAGACCTAAAA+AGG | + | chr8_4:17459124-17459143 | None:intergenic | 20.0% |
| !!! | TATATTTTTAACGTTCCAAA+TGG | + | chr8_4:17459757-17459776 | None:intergenic | 20.0% |
| !!! | CTATTTAATTAATATCGGTT+TGG | - | chr8_4:17459874-17459893 | Msa1316600:intron | 20.0% |
| !! | AGTAATAGAGAGAAATTTAA+GGG | + | chr8_4:17459930-17459949 | None:intergenic | 20.0% |
| !! | TAGTAATAGAGAGAAATTTA+AGG | + | chr8_4:17459931-17459950 | None:intergenic | 20.0% |
| !! | ATTTCTCTCTATTACTAAAA+AGG | - | chr8_4:17459934-17459953 | Msa1316600:intron | 20.0% |
| !! | AGTGCATAGTTAATTATTAA+GGG | + | chr8_4:17460149-17460168 | None:intergenic | 20.0% |
| !! | TAGTGCATAGTTAATTATTA+AGG | + | chr8_4:17460150-17460169 | None:intergenic | 20.0% |
| !! | TTGAAAAAAAATAGTATTGC+GGG | + | chr8_4:17460424-17460443 | None:intergenic | 20.0% |
| !! | GAAATGCAAAAAAATTATTG+AGG | - | chr8_4:17460482-17460501 | Msa1316600:intron | 20.0% |
| !!! | TAGATTTTAACATAAGATCA+GGG | - | chr8_4:17460515-17460534 | Msa1316600:intron | 20.0% |
| !!! | AATGCATATTTTAACATAAG+AGG | - | chr8_4:17460617-17460636 | Msa1316600:intron | 20.0% |
| !!! | ATGCATATTTTAACATAAGA+GGG | - | chr8_4:17460618-17460637 | Msa1316600:intron | 20.0% |
| !! | CATATACATATAAGTGATTA+GGG | + | chr8_4:17460750-17460769 | None:intergenic | 20.0% |
| !! | ACATATACATATAAGTGATT+AGG | + | chr8_4:17460751-17460770 | None:intergenic | 20.0% |
| !! | AAAGATGGTAAAATGATTAA+GGG | + | chr8_4:17461107-17461126 | None:intergenic | 20.0% |
| !! | AAAAGATGGTAAAATGATTA+AGG | + | chr8_4:17461108-17461127 | None:intergenic | 20.0% |
| ! | AATAAGAATACTGCAAAGAA+TGG | - | chr8_4:17456876-17456895 | Msa1316600:intron | 25.0% |
| !! | GGTGATAAATTTCATTGATT+AGG | - | chr8_4:17457097-17457116 | Msa1316600:intron | 25.0% |
| !! | GAATATTTGTCTTAATTTGG+TGG | - | chr8_4:17457197-17457216 | Msa1316600:intron | 25.0% |
| ! | CAGGACAAAATACATAAAAT+TGG | + | chr8_4:17457225-17457244 | None:intergenic | 25.0% |
| ! | ATCTTAAATTCTTAATCCAC+TGG | - | chr8_4:17457294-17457313 | Msa1316600:intron | 25.0% |
| ! | TCTTAAATTCTTAATCCACT+GGG | - | chr8_4:17457295-17457314 | Msa1316600:intron | 25.0% |
| ! | TGATAACATATTAGTACAAC+TGG | + | chr8_4:17457336-17457355 | None:intergenic | 25.0% |
| ! | TTAACTGATTAAACTTTGCA+GGG | + | chr8_4:17458075-17458094 | None:intergenic | 25.0% |
| ! | TTTAACTGATTAAACTTTGC+AGG | + | chr8_4:17458074-17458093 | None:intergenic | 25.0% |
| ! | TAAGGAAAAAAAATAAGCCA+GGG | + | chr8_4:17457778-17457797 | None:intergenic | 25.0% |
| ! | TTAAGGAAAAAAAATAAGCC+AGG | + | chr8_4:17457779-17457798 | None:intergenic | 25.0% |
| ! | AAAAAAAATGGGGAAAAATC+TGG | - | chr8_4:17457929-17457948 | Msa1316600:intron | 25.0% |
| ! | AACAAAAAAAAATAAGCCAG+GGG | - | chr8_4:17457976-17457995 | Msa1316600:intron | 25.0% |
| ! | TTTAACTGATTAAACTTTGC+AGG | - | chr8_4:17458074-17458093 | Msa1316600:intron | 25.0% |
| ! | TTAACTGATTAAACTTTGCA+GGG | - | chr8_4:17458075-17458094 | Msa1316600:intron | 25.0% |
| !! | TTAGATACTATAGTTCTGTT+GGG | + | chr8_4:17458884-17458903 | None:intergenic | 25.0% |
| !! | TTTAGATACTATAGTTCTGT+TGG | + | chr8_4:17458885-17458904 | None:intergenic | 25.0% |
| !! | TGCAAACTTTTTAATATCCT+GGG | + | chr8_4:17459090-17459109 | None:intergenic | 25.0% |
| !! | ATGCAAACTTTTTAATATCC+TGG | + | chr8_4:17459091-17459110 | None:intergenic | 25.0% |
| ! | TCTTACATTAACAACATCAT+AGG | - | chr8_4:17459184-17459203 | Msa1316600:intron | 25.0% |
| ! | TAGCAAGTAGAAATAGAAAA+TGG | - | chr8_4:17459325-17459344 | Msa1316600:intron | 25.0% |
| ! | TGGAAAGAAAAAAGAAATTC+AGG | - | chr8_4:17459345-17459364 | Msa1316600:intron | 25.0% |
| ! | GGAAAGAAAAAAGAAATTCA+GGG | - | chr8_4:17459346-17459365 | Msa1316600:intron | 25.0% |
| ! | AAAAAGAAATTCAGGGATTA+AGG | - | chr8_4:17459353-17459372 | Msa1316600:intron | 25.0% |
| !!! | TTGTAACTTCTCATTTTTCA+CGG | + | chr8_4:17459609-17459628 | None:intergenic | 25.0% |
| ! | AAAAGGACTAAAAGTTGTAA+CGG | - | chr8_4:17459951-17459970 | Msa1316600:intron | 25.0% |
| !! | AGAAGGCAAGTATATATTTT+AGG | + | chr8_4:17460069-17460088 | None:intergenic | 25.0% |
| !!! | GTAGATTTTAACATAAGATC+AGG | - | chr8_4:17460514-17460533 | Msa1316600:intron | 25.0% |
| !!! | AGATTTTAACATAAGATCAG+GGG | - | chr8_4:17460516-17460535 | Msa1316600:intron | 25.0% |
| !!! | TCTAATATGTTTTGAATAGG+AGG | - | chr8_4:17460587-17460606 | Msa1316600:intron | 25.0% |
| !!! | CTAATATGTTTTGAATAGGA+GGG | - | chr8_4:17460588-17460607 | Msa1316600:intron | 25.0% |
| !!! | TAATATGTTTTGAATAGGAG+GGG | - | chr8_4:17460589-17460608 | Msa1316600:intron | 25.0% |
| !!! | TGCATATTTTAACATAAGAG+GGG | - | chr8_4:17460619-17460638 | Msa1316600:intron | 25.0% |
| ! | AATTGAAGAAATGAATTGAG+CGG | + | chr8_4:17461015-17461034 | None:intergenic | 25.0% |
| ! | AACAACAATAATAACAATGG+TGG | - | chr8_4:17461348-17461367 | Msa1316600:CDS | 25.0% |
| CGTTAGATGAAGAAAATTCA+GGG | + | chr8_4:17456366-17456385 | None:intergenic | 30.0% | |
| ! | CCTGAATTTTCTTCATCTAA+CGG | - | chr8_4:17456364-17456383 | Msa1316600:CDS | 30.0% |
| ! | ATGGTATTATTGGATTAGGA+GGG | + | chr8_4:17456492-17456511 | None:intergenic | 30.0% |
| ! | GATTGTGTTTGTGTTTGTTA+TGG | + | chr8_4:17456554-17456573 | None:intergenic | 30.0% |
| CTCGAATTCGAAAACATTAA+CGG | + | chr8_4:17456634-17456653 | None:intergenic | 30.0% | |
| AATTACACTACAAAAGAGGA+AGG | + | chr8_4:17457386-17457405 | None:intergenic | 30.0% | |
| TAACTGATTAAACTTTGCAG+GGG | + | chr8_4:17458076-17458095 | None:intergenic | 30.0% | |
| AAGGAAAAAAAATAAGCCAG+GGG | + | chr8_4:17457777-17457796 | None:intergenic | 30.0% | |
| TAACTGATTAAACTTTGCAG+GGG | - | chr8_4:17458076-17458095 | Msa1316600:intron | 30.0% | |
| ! | AAAAAAGGATTAGTGATTGG+AGG | - | chr8_4:17458103-17458122 | Msa1316600:intron | 30.0% |
| ! | AAAAAGGATTAGTGATTGGA+GGG | - | chr8_4:17458104-17458123 | Msa1316600:intron | 30.0% |
| ! | TTAACAAACATTTTTGCAGG+AGG | - | chr8_4:17458421-17458440 | Msa1316600:intron | 30.0% |
| ! | CAAACTTTTAATCTTTGGTG+AGG | - | chr8_4:17458775-17458794 | Msa1316600:intron | 30.0% |
| ! | TTTCATTGAACACACACTTT+TGG | + | chr8_4:17459028-17459047 | None:intergenic | 30.0% |
| GTTTCACTGATCAATAAAAC+TGG | + | chr8_4:17459062-17459081 | None:intergenic | 30.0% | |
| GGTTATCCACGTAATATTTA+TGG | + | chr8_4:17459500-17459519 | None:intergenic | 30.0% | |
| AACAAAAAAAATATCCGACG+TGG | + | chr8_4:17459521-17459540 | None:intergenic | 30.0% | |
| TGATAAATTACGCATGTGTT+TGG | - | chr8_4:17459540-17459559 | Msa1316600:intron | 30.0% | |
| TCATAGATCTTGTAGAGAAA+TGG | + | chr8_4:17460113-17460132 | None:intergenic | 30.0% | |
| ATGTAATTCAAGCTTCTCTT+AGG | - | chr8_4:17460545-17460564 | Msa1316600:intron | 30.0% | |
| TGTAATTCAAGCTTCTCTTA+GGG | - | chr8_4:17460546-17460565 | Msa1316600:intron | 30.0% | |
| !!! | ATATTTTAACATAAGAGGGG+AGG | - | chr8_4:17460622-17460641 | Msa1316600:intron | 30.0% |
| GGTAATTCAAACATCTTTGA+GGG | - | chr8_4:17460649-17460668 | Msa1316600:intron | 30.0% | |
| GTAATTCAAACATCTTTGAG+GGG | - | chr8_4:17460650-17460669 | Msa1316600:intron | 30.0% | |
| AAATGCTTAGATTGAACTCA+TGG | - | chr8_4:17460839-17460858 | Msa1316600:CDS | 30.0% | |
| AAGAAGAAAAGCAACAAAGA+TGG | + | chr8_4:17461066-17461085 | None:intergenic | 30.0% | |
| TGATTAAGGGAAATGAAGAA+GGG | + | chr8_4:17461094-17461113 | None:intergenic | 30.0% | |
| ATGATTAAGGGAAATGAAGA+AGG | + | chr8_4:17461095-17461114 | None:intergenic | 30.0% | |
| TTTGGATGGAATGAAAAAGA+TGG | + | chr8_4:17461122-17461141 | None:intergenic | 30.0% | |
| TAAAGATAGACATGTTTGGA+TGG | + | chr8_4:17461136-17461155 | None:intergenic | 30.0% | |
| GAGTTAAAGATAGACATGTT+TGG | + | chr8_4:17461140-17461159 | None:intergenic | 30.0% | |
| GGCAACAACAATAATAACAA+TGG | - | chr8_4:17461345-17461364 | Msa1316600:CDS | 30.0% | |
| AACAATAATAACAATGGTGG+TGG | - | chr8_4:17461351-17461370 | Msa1316600:CDS | 30.0% | |
| CCGTTAGATGAAGAAAATTC+AGG | + | chr8_4:17456367-17456386 | None:intergenic | 35.0% | |
| TGACGGTTGAAATTGATTGA+TGG | + | chr8_4:17456401-17456420 | None:intergenic | 35.0% | |
| CCATAGAATTGTTGATCTGA+CGG | + | chr8_4:17456418-17456437 | None:intergenic | 35.0% | |
| ! | CATGGTATTATTGGATTAGG+AGG | + | chr8_4:17456493-17456512 | None:intergenic | 35.0% |
| CTCCTAATCCAATAATACCA+TGG | - | chr8_4:17456491-17456510 | Msa1316600:CDS | 35.0% | |
| GACCATGGTATTATTGGATT+AGG | + | chr8_4:17456496-17456515 | None:intergenic | 35.0% | |
| GATGAAGACCATGGTATTAT+TGG | + | chr8_4:17456502-17456521 | None:intergenic | 35.0% | |
| AATGATGAAGATGAAGACCA+TGG | + | chr8_4:17456511-17456530 | None:intergenic | 35.0% | |
| !! | GTGTTTGTTATGGATTGTGA+GGG | + | chr8_4:17456544-17456563 | None:intergenic | 35.0% |
| !! | TGTGTTTGTTATGGATTGTG+AGG | + | chr8_4:17456545-17456564 | None:intergenic | 35.0% |
| ! | TGTTGTTGTTGGAACCTTAA+TGG | + | chr8_4:17456604-17456623 | None:intergenic | 35.0% |
| GATTCTGGGTCTATGTAAAT+TGG | + | chr8_4:17456766-17456785 | None:intergenic | 35.0% | |
| !!! | TTGGTGGTTTTACTGATTCT+GGG | + | chr8_4:17456780-17456799 | None:intergenic | 35.0% |
| !!! | TTTGGTGGTTTTACTGATTC+TGG | + | chr8_4:17456781-17456800 | None:intergenic | 35.0% |
| ATCTTCACGTTTCTTCTCTT+TGG | + | chr8_4:17456799-17456818 | None:intergenic | 35.0% | |
| ! | ATCAACTGTCCTTTTACTGT+TGG | + | chr8_4:17457010-17457029 | None:intergenic | 35.0% |
| AACAGTAAAAGGACAGTTGA+TGG | - | chr8_4:17457009-17457028 | Msa1316600:intron | 35.0% | |
| GTCGTAATGTTGATCGTTAT+GGG | - | chr8_4:17457076-17457095 | Msa1316600:intron | 35.0% | |
| TTAAAATATTGGAGCGAGTG+TGG | - | chr8_4:17457495-17457514 | Msa1316600:intron | 35.0% | |
| TAAAATATTGGAGCGAGTGT+GGG | - | chr8_4:17457496-17457515 | Msa1316600:intron | 35.0% | |
| ! | AAAAAGGATTAGCGATTGCA+GGG | + | chr8_4:17457649-17457668 | None:intergenic | 35.0% |
| ! | AAAAAAGGATTAGCGATTGC+AGG | + | chr8_4:17457650-17457669 | None:intergenic | 35.0% |
| CAGTGATTAAATTGGGTCAA+AGG | - | chr8_4:17458044-17458063 | Msa1316600:intron | 35.0% | |
| !! | TTCTGAGGCTAAAAAAGTTG+AGG | - | chr8_4:17458548-17458567 | Msa1316600:intron | 35.0% |
| ! | TCAACTTTTGCTTGGAAGTT+GGG | + | chr8_4:17459254-17459273 | None:intergenic | 35.0% |
| ! | ATCAACTTTTGCTTGGAAGT+TGG | + | chr8_4:17459255-17459274 | None:intergenic | 35.0% |
| ! | CTCATGTATCAACTTTTGCT+TGG | + | chr8_4:17459262-17459281 | None:intergenic | 35.0% |
| !! | CAAGCAAAAGTTGATACATG+AGG | - | chr8_4:17459260-17459279 | Msa1316600:intron | 35.0% |
| AATCTTGTCAGATAATCACG+TGG | + | chr8_4:17459392-17459411 | None:intergenic | 35.0% | |
| GTGATTATCTGACAAGATTG+CGG | - | chr8_4:17459393-17459412 | Msa1316600:intron | 35.0% | |
| GGTCAACCATAAATATTACG+TGG | - | chr8_4:17459491-17459510 | Msa1316600:intron | 35.0% | |
| !! | CATATAGCGTGTTTTTGAAG+CGG | + | chr8_4:17459672-17459691 | None:intergenic | 35.0% |
| CCAAATGGAGAAAATGTTCA+CGG | + | chr8_4:17459742-17459761 | None:intergenic | 35.0% | |
| ! | TGTAACGGAGAGAAAGTTAA+AGG | - | chr8_4:17459966-17459985 | Msa1316600:intron | 35.0% |
| GTAATTCAAGCTTCTCTTAG+GGG | - | chr8_4:17460547-17460566 | Msa1316600:intron | 35.0% | |
| GGGTAATTCAAACATCTTTG+AGG | - | chr8_4:17460648-17460667 | Msa1316600:intron | 35.0% | |
| AAATACTAAAATGCCCCCAA+CGG | - | chr8_4:17460951-17460970 | Msa1316600:CDS | 35.0% | |
| TATTGAGAGAAAGAAGAGAG+TGG | + | chr8_4:17461171-17461190 | None:intergenic | 35.0% | |
| ! | GAAACTGAAGGATTTTGTTG+TGG | + | chr8_4:17461213-17461232 | None:intergenic | 35.0% |
| ! | TAAGTGTTATTACCAGATGG+GGG | + | chr8_4:17461279-17461298 | None:intergenic | 35.0% |
| ! | GTAAGTGTTATTACCAGATG+GGG | + | chr8_4:17461280-17461299 | None:intergenic | 35.0% |
| ! | GGTAAGTGTTATTACCAGAT+GGG | + | chr8_4:17461281-17461300 | None:intergenic | 35.0% |
| GTGTTGTGTAATATGCAAGA+GGG | + | chr8_4:17461416-17461435 | None:intergenic | 35.0% | |
| TGTGTTGTGTAATATGCAAG+AGG | + | chr8_4:17461417-17461436 | None:intergenic | 35.0% | |
| CCGTCAGATCAACAATTCTA+TGG | - | chr8_4:17456415-17456434 | Msa1316600:CDS | 40.0% | |
| TGGTGCAGTAGAGTTGTTAT+TGG | + | chr8_4:17456584-17456603 | None:intergenic | 40.0% | |
| ACAACTCTACTGCACCATTA+AGG | - | chr8_4:17456587-17456606 | Msa1316600:intron | 40.0% | |
| !! | ACGGTGTTGTTTGTTGTTGT+TGG | + | chr8_4:17456615-17456634 | None:intergenic | 40.0% |
| ATCGAGTTTCTCTTCTCTGA+TGG | + | chr8_4:17456700-17456719 | None:intergenic | 40.0% | |
| ATCAGAGAAGAGAAACTCGA+TGG | - | chr8_4:17456699-17456718 | Msa1316600:intron | 40.0% | |
| TTCACGTTTCTTCTCTTTGG+TGG | + | chr8_4:17456796-17456815 | None:intergenic | 40.0% | |
| ATACTGCAAAGAATGGTACC+AGG | - | chr8_4:17456883-17456902 | Msa1316600:intron | 40.0% | |
| GATGGATACTGCATCAATGT+TGG | - | chr8_4:17456915-17456934 | Msa1316600:intron | 40.0% | |
| !! | AAAAGGACAGTTGATGGTTC+AGG | - | chr8_4:17457015-17457034 | Msa1316600:intron | 40.0% |
| !! | ACAGTTGATGGTTCAGGATT+AGG | - | chr8_4:17457021-17457040 | Msa1316600:intron | 40.0% |
| !! | CAGTTGATGGTTCAGGATTA+GGG | - | chr8_4:17457022-17457041 | Msa1316600:intron | 40.0% |
| AAGGCTTAGGCAATGAAACA+GGG | + | chr8_4:17457050-17457069 | None:intergenic | 40.0% | |
| TAAGGCTTAGGCAATGAAAC+AGG | + | chr8_4:17457051-17457070 | None:intergenic | 40.0% | |
| TCAACATTACGACCTTGGTA+AGG | + | chr8_4:17457069-17457088 | None:intergenic | 40.0% | |
| AACGATCAACATTACGACCT+TGG | + | chr8_4:17457074-17457093 | None:intergenic | 40.0% | |
| GGTCGTAATGTTGATCGTTA+TGG | - | chr8_4:17457075-17457094 | Msa1316600:intron | 40.0% | |
| TTTGTCCTGTTCATCATGCA+TGG | - | chr8_4:17457236-17457255 | Msa1316600:intron | 40.0% | |
| GATATCCATGCATGATGAAC+AGG | + | chr8_4:17457244-17457263 | None:intergenic | 40.0% | |
| ATTCTTAATCCACTGGGATC+TGG | - | chr8_4:17457301-17457320 | Msa1316600:intron | 40.0% | |
| CTTTGCAGGGGCAAAAAAAA+AGG | + | chr8_4:17458088-17458107 | None:intergenic | 40.0% | |
| !!! | ATTTTGGTGATTTGCTGACG+TGG | + | chr8_4:17457732-17457751 | None:intergenic | 40.0% |
| ACGTCAGCAAATCACCAAAA+TGG | - | chr8_4:17457731-17457750 | Msa1316600:intron | 40.0% | |
| ACGTCAGCAAATGACCAAAA+GGG | + | chr8_4:17458022-17458041 | None:intergenic | 40.0% | |
| TGACGTGGCAGTGATTAAAT+TGG | - | chr8_4:17458036-17458055 | Msa1316600:intron | 40.0% | |
| GACGTGGCAGTGATTAAATT+GGG | - | chr8_4:17458037-17458056 | Msa1316600:intron | 40.0% | |
| CTTTGCAGGGGCAAAAAAAA+AGG | - | chr8_4:17458088-17458107 | Msa1316600:intron | 40.0% | |
| ! | ACAAACATTTTTGCAGGAGG+AGG | - | chr8_4:17458424-17458443 | Msa1316600:intron | 40.0% |
| ! | CAAACATTTTTGCAGGAGGA+GGG | - | chr8_4:17458425-17458444 | Msa1316600:intron | 40.0% |
| CATGGGTGCACACAAAAATT+AGG | - | chr8_4:17458470-17458489 | Msa1316600:intron | 40.0% | |
| ! | CAACTTTTGCTTGGAAGTTG+GGG | + | chr8_4:17459253-17459272 | None:intergenic | 40.0% |
| ATTATCTGACAAGATTGCGG+TGG | - | chr8_4:17459396-17459415 | Msa1316600:intron | 40.0% | |
| TTATGGTTGACCAAGCAGAT+GGG | + | chr8_4:17459483-17459502 | None:intergenic | 40.0% | |
| TTTATGGTTGACCAAGCAGA+TGG | + | chr8_4:17459484-17459503 | None:intergenic | 40.0% | |
| TATTACGTGGATAACCACGT+CGG | - | chr8_4:17459504-17459523 | Msa1316600:intron | 40.0% | |
| ! | TACGCATGTGTTTGGAATTC+TGG | - | chr8_4:17459548-17459567 | Msa1316600:intron | 40.0% |
| TTGCAAATTCTTGCGTTACG+AGG | - | chr8_4:17459575-17459594 | Msa1316600:intron | 40.0% | |
| TGGAGAAAATGTTCACGGAA+TGG | + | chr8_4:17459737-17459756 | None:intergenic | 40.0% | |
| ! | CCGTGAACATTTTCTCCATT+TGG | - | chr8_4:17459739-17459758 | Msa1316600:intron | 40.0% |
| ! | ATTCAAACATCTTTGAGGGG+AGG | - | chr8_4:17460653-17460672 | Msa1316600:intron | 40.0% |
| ! | TTCAAACATCTTTGAGGGGA+GGG | - | chr8_4:17460654-17460673 | Msa1316600:intron | 40.0% |
| AAGGGAAATGAAGAAGGGAA+GGG | + | chr8_4:17461089-17461108 | None:intergenic | 40.0% | |
| TAAGGGAAATGAAGAAGGGA+AGG | + | chr8_4:17461090-17461109 | None:intergenic | 40.0% | |
| !! | CTGAAGGATTTTGTTGTGGT+TGG | + | chr8_4:17461209-17461228 | None:intergenic | 40.0% |
| TATGGTAATCCAGATTGTGG+TGG | + | chr8_4:17461252-17461271 | None:intergenic | 40.0% | |
| GGATATGGTAATCCAGATTG+TGG | + | chr8_4:17461255-17461274 | None:intergenic | 40.0% | |
| ! | GGGTAAGTGTTATTACCAGA+TGG | + | chr8_4:17461282-17461301 | None:intergenic | 40.0% |
| AAGGTGGTGTTCGATTACAA+GGG | + | chr8_4:17461302-17461321 | None:intergenic | 40.0% | |
| TAAGGTGGTGTTCGATTACA+AGG | + | chr8_4:17461303-17461322 | None:intergenic | 40.0% | |
| TGTAATCGAACACCACCTTA+TGG | - | chr8_4:17461303-17461322 | Msa1316600:CDS | 40.0% | |
| !! | AACAATGGTGGTGGTGTTTA+TGG | - | chr8_4:17461360-17461379 | Msa1316600:CDS | 40.0% |
| AACAAATCATCTTCAGGCTG+TGG | + | chr8_4:17461393-17461412 | None:intergenic | 40.0% | |
| AGAGGGAACAAATCATCTTC+AGG | + | chr8_4:17461399-17461418 | None:intergenic | 40.0% | |
| GTACCGTAATGGTTCGCATT+CGG | + | chr8_4:17456670-17456689 | None:intergenic | 45.0% | |
| ATGGAGATGCAGTACCGTAA+TGG | + | chr8_4:17456681-17456700 | None:intergenic | 45.0% | |
| AGAGAAGAGAAACTCGATGG+CGG | - | chr8_4:17456702-17456721 | Msa1316600:intron | 45.0% | |
| GTATCCATCTTAGTTCCACC+TGG | + | chr8_4:17456904-17456923 | None:intergenic | 45.0% | |
| CTTCAGGAGCCAACAGTAAA+AGG | - | chr8_4:17456998-17457017 | Msa1316600:intron | 45.0% | |
| TCATTGCCTAAGCCTTACCA+AGG | - | chr8_4:17457054-17457073 | Msa1316600:intron | 45.0% | |
| TTACGACCTTGGTAAGGCTT+AGG | + | chr8_4:17457063-17457082 | None:intergenic | 45.0% | |
| AATTTCACACCAGATCCCAG+TGG | + | chr8_4:17457313-17457332 | None:intergenic | 45.0% | |
| TGTGATTCGTCCCTGCAAAT+AGG | - | chr8_4:17457605-17457624 | Msa1316600:intron | 45.0% | |
| GTGATTCGTCCCTGCAAATA+GGG | - | chr8_4:17457606-17457625 | Msa1316600:intron | 45.0% | |
| TTAAGCGAGCCCTATTTGCA+GGG | + | chr8_4:17457618-17457637 | None:intergenic | 45.0% | |
| TTTAAGCGAGCCCTATTTGC+AGG | + | chr8_4:17457619-17457638 | None:intergenic | 45.0% | |
| CAGTGATTCAACTGGGTCAA+AGG | + | chr8_4:17457709-17457728 | None:intergenic | 45.0% | |
| CACGTCAGCAAATGACCAAA+AGG | + | chr8_4:17458023-17458042 | None:intergenic | 45.0% | |
| !! | CTTTTGGTCATTTGCTGACG+TGG | - | chr8_4:17458021-17458040 | Msa1316600:intron | 45.0% |
| TTTAAGCGACCCCTATTTGC+AGG | - | chr8_4:17458134-17458153 | Msa1316600:intron | 45.0% | |
| TTAAGCGACCCCTATTTGCA+GGG | - | chr8_4:17458135-17458154 | Msa1316600:intron | 45.0% | |
| TGATTCGTCCCTGCAAATAG+GGG | + | chr8_4:17457607-17457626 | None:intergenic | 45.0% | |
| GTGATTCGTCCCTGCAAATA+GGG | + | chr8_4:17457606-17457625 | None:intergenic | 45.0% | |
| TGTGATTCGTCCCTGCAAAT+AGG | + | chr8_4:17457605-17457624 | None:intergenic | 45.0% | |
| AAAAATTAGGCTCCCGCTGT+TGG | - | chr8_4:17458483-17458502 | Msa1316600:intron | 45.0% | |
| AAAATTAGGCTCCCGCTGTT+GGG | - | chr8_4:17458484-17458503 | Msa1316600:intron | 45.0% | |
| ! | TACGGGAAACAAACTGGTCT+TGG | - | chr8_4:17458524-17458543 | Msa1316600:intron | 45.0% |
| !! | CAAACTGGTCTTGGTTTCTG+AGG | - | chr8_4:17458533-17458552 | Msa1316600:intron | 45.0% |
| GATCAGTGAAACAAACACCC+AGG | - | chr8_4:17459070-17459089 | Msa1316600:intron | 45.0% | |
| ! | TCTTGGAATGAGAGCATGAC+TGG | - | chr8_4:17459224-17459243 | Msa1316600:intron | 45.0% |
| !!! | TAGCGTGTTTTTGAAGCGGT+GGG | + | chr8_4:17459668-17459687 | None:intergenic | 45.0% |
| !!! | ATAGCGTGTTTTTGAAGCGG+TGG | + | chr8_4:17459669-17459688 | None:intergenic | 45.0% |
| ATTCAAGCTTCTCTTAGGGG+AGG | - | chr8_4:17460550-17460569 | Msa1316600:intron | 45.0% | |
| TTCAAGCTTCTCTTAGGGGA+GGG | - | chr8_4:17460551-17460570 | Msa1316600:intron | 45.0% | |
| TTAACATAAGAGGGGAGGTG+AGG | - | chr8_4:17460627-17460646 | Msa1316600:intron | 45.0% | |
| TAACATAAGAGGGGAGGTGA+GGG | - | chr8_4:17460628-17460647 | Msa1316600:intron | 45.0% | |
| ! | TCAAACATCTTTGAGGGGAG+GGG | - | chr8_4:17460655-17460674 | Msa1316600:intron | 45.0% |
| AACGGTAGTCAACTACCGTT+GGG | + | chr8_4:17460969-17460988 | None:intergenic | 45.0% | |
| GAGAAAGAAGAGAGTGGAAG+TGG | + | chr8_4:17461165-17461184 | None:intergenic | 45.0% | |
| AAATCATCTTCAGGCTGTGG+TGG | + | chr8_4:17461390-17461409 | None:intergenic | 45.0% | |
| !!! | TATTTTCTTAATTAAAATAT+TGG | - | chr8_4:17457484-17457503 | Msa1316600:intron | 5.0% |
| !!! | TGATATTATATTAATTTTAA+GGG | - | chr8_4:17457575-17457594 | Msa1316600:intron | 5.0% |
| !!! | AAATTTTGAAATTTTTTTTA+AGG | + | chr8_4:17457796-17457815 | None:intergenic | 5.0% |
| !!! | ATTTTTTATATATAATTTCT+TGG | - | chr8_4:17459207-17459226 | Msa1316600:intron | 5.0% |
| !!! | ACATATTTTAATTTAATTTT+GGG | - | chr8_4:17460295-17460314 | Msa1316600:intron | 5.0% |
| !!! | AAATTTTGATTATATTAAAT+TGG | - | chr8_4:17460397-17460416 | Msa1316600:intron | 5.0% |
| !! | AAATATAATTATAATTTGAT+TGG | - | chr8_4:17460795-17460814 | Msa1316600:CDS | 5.0% |
| CCTCCGAATGCGAACCATTA+CGG | - | chr8_4:17456664-17456683 | Msa1316600:intron | 50.0% | |
| TGTCTAGCTGCTACACTCTG+AGG | + | chr8_4:17456832-17456851 | None:intergenic | 50.0% | |
| CTGCAAAGAATGGTACCAGG+TGG | - | chr8_4:17456886-17456905 | Msa1316600:intron | 50.0% | |
| GGTACCAGGTGGAACTAAGA+TGG | - | chr8_4:17456897-17456916 | Msa1316600:intron | 50.0% | |
| GACACAGCTTAAGTCACTGC+AGG | - | chr8_4:17456969-17456988 | Msa1316600:intron | 50.0% | |
| GACGTGGCAGTGATTCAACT+GGG | + | chr8_4:17457716-17457735 | None:intergenic | 50.0% | |
| TGACGTGGCAGTGATTCAAC+TGG | + | chr8_4:17457717-17457736 | None:intergenic | 50.0% | |
| TCACCAAAATGGCACGCGAA+AGG | - | chr8_4:17457742-17457761 | Msa1316600:intron | 50.0% | |
| CGAAAGGACGAAAATACCCC+TGG | - | chr8_4:17457758-17457777 | Msa1316600:intron | 50.0% | |
| CGAAAGGACGAAAATACCCC+TGG | + | chr8_4:17457758-17457777 | None:intergenic | 50.0% | |
| ! | ACATTTTTGCAGGAGGAGGG+AGG | - | chr8_4:17458428-17458447 | Msa1316600:intron | 50.0% |
| AGGGAGCAGTGTGCTTAACA+TGG | - | chr8_4:17458452-17458471 | Msa1316600:intron | 50.0% | |
| GGGAGCAGTGTGCTTAACAT+GGG | - | chr8_4:17458453-17458472 | Msa1316600:intron | 50.0% | |
| GTACATATGTGCCCAACAGC+GGG | + | chr8_4:17458498-17458517 | None:intergenic | 50.0% | |
| CGTACATATGTGCCCAACAG+CGG | + | chr8_4:17458499-17458518 | None:intergenic | 50.0% | |
| CGCTGTTGGGCACATATGTA+CGG | - | chr8_4:17458497-17458516 | Msa1316600:intron | 50.0% | |
| GCACATATGTACGGCCACTA+CGG | - | chr8_4:17458506-17458525 | Msa1316600:intron | 50.0% | |
| CACATATGTACGGCCACTAC+GGG | - | chr8_4:17458507-17458526 | Msa1316600:intron | 50.0% | |
| ! | GACCAGTTTGTTTCCCGTAG+TGG | + | chr8_4:17458523-17458542 | None:intergenic | 50.0% |
| ! | CTTTTGCTTGGAAGTTGGGG+TGG | + | chr8_4:17459250-17459269 | None:intergenic | 50.0% |
| CAGATGGGTATCACGTGTCA+GGG | + | chr8_4:17459468-17459487 | None:intergenic | 50.0% | |
| ACACGTGATACCCATCTGCT+TGG | - | chr8_4:17459470-17459489 | Msa1316600:intron | 50.0% | |
| !!! | AGCGTGTTTTTGAAGCGGTG+GGG | + | chr8_4:17459667-17459686 | None:intergenic | 50.0% |
| TCAAGCTTCTCTTAGGGGAG+GGG | - | chr8_4:17460552-17460571 | Msa1316600:intron | 50.0% | |
| ACGGTAGTCAACTACCGTTG+GGG | + | chr8_4:17460968-17460987 | None:intergenic | 50.0% | |
| CAACGGTAGTCAACTACCGT+TGG | + | chr8_4:17460970-17460989 | None:intergenic | 50.0% | |
| ACGGTAGTTGACTACCGTTG+AGG | - | chr8_4:17460970-17460989 | Msa1316600:CDS | 50.0% | |
| AGCGGTAGTTAACTACCGCT+GGG | + | chr8_4:17460997-17461016 | None:intergenic | 50.0% | |
| GGTGGAGCTGTTGAAACTGA+AGG | + | chr8_4:17461225-17461244 | None:intergenic | 50.0% | |
| ! | AATCCAGATTGTGGTGGTGC+TGG | + | chr8_4:17461246-17461265 | None:intergenic | 50.0% |
| TTACCATATCCACCCCCATC+TGG | - | chr8_4:17461264-17461283 | Msa1316600:CDS | 50.0% | |
| TTACCAGATGGGGGTGGATA+TGG | + | chr8_4:17461270-17461289 | None:intergenic | 50.0% | |
| ! | GTGTTATTACCAGATGGGGG+TGG | + | chr8_4:17461276-17461295 | None:intergenic | 50.0% |
| CCGTAATGGTTCGCATTCGG+AGG | + | chr8_4:17456667-17456686 | None:intergenic | 55.0% | |
| ! | AAACTCGATGGCGGCGTTGA+GGG | - | chr8_4:17456711-17456730 | Msa1316600:intron | 55.0% |
| TCACTGCAGGAACGTGCTTC+AGG | - | chr8_4:17456982-17457001 | Msa1316600:intron | 55.0% | |
| !!! | CGTCCTTTCGCGTGCCATTT+TGG | + | chr8_4:17457748-17457767 | None:intergenic | 55.0% |
| ! | TGACCAAAAGGGCACGCGAA+AGG | + | chr8_4:17458011-17458030 | None:intergenic | 55.0% |
| GGCCACTACGGGAAACAAAC+TGG | - | chr8_4:17458518-17458537 | Msa1316600:intron | 55.0% | |
| ! | TACATGAGGTGTCTCTGCGC+TGG | - | chr8_4:17459274-17459293 | Msa1316600:intron | 55.0% |
| ! | ACATGAGGTGTCTCTGCGCT+GGG | - | chr8_4:17459275-17459294 | Msa1316600:intron | 55.0% |
| GCGGTGGTTGCGTTTACGAT+CGG | - | chr8_4:17459412-17459431 | Msa1316600:intron | 55.0% | |
| CGGTGGTTGCGTTTACGATC+GGG | - | chr8_4:17459413-17459432 | Msa1316600:intron | 55.0% | |
| GTTGCGTTTACGATCGGGCA+CGG | - | chr8_4:17459418-17459437 | Msa1316600:intron | 55.0% | |
| GCAGATGGGTATCACGTGTC+AGG | + | chr8_4:17459469-17459488 | None:intergenic | 55.0% | |
| CGGTAGTCAACTACCGTTGG+GGG | + | chr8_4:17460967-17460986 | None:intergenic | 55.0% | |
| AACTACCGCTGGGTCCTCAA+CGG | + | chr8_4:17460987-17461006 | None:intergenic | 55.0% | |
| GAGCGGTAGTTAACTACCGC+TGG | + | chr8_4:17460998-17461017 | None:intergenic | 55.0% | |
| CGAACACCACCTTATGGCAG+CGG | - | chr8_4:17461309-17461328 | Msa1316600:CDS | 55.0% | |
| ! | GAAACTCGATGGCGGCGTTG+AGG | - | chr8_4:17456710-17456729 | Msa1316600:intron | 60.0% |
| ! | CGTCCTTTCGCGTGCCCTTT+TGG | - | chr8_4:17458005-17458024 | Msa1316600:intron | 60.0% |
| ! | TTTTGCAGGAGGAGGGAGGC+AGG | - | chr8_4:17458432-17458451 | Msa1316600:intron | 60.0% |
| TTTGCAGGAGGAGGGAGGCA+GGG | - | chr8_4:17458433-17458452 | Msa1316600:intron | 60.0% | |
| ! | CATGAGGTGTCTCTGCGCTG+GGG | - | chr8_4:17459276-17459295 | Msa1316600:intron | 60.0% |
| GACTACCGTTGAGGACCCAG+CGG | - | chr8_4:17460979-17460998 | Msa1316600:CDS | 60.0% | |
| ! | CCAGATTGTGGTGGTGCTGG+TGG | + | chr8_4:17461243-17461262 | None:intergenic | 60.0% |
| CCACCAGCACCACCACAATC+TGG | - | chr8_4:17461240-17461259 | Msa1316600:CDS | 60.0% | |
| ACACCACCTTATGGCAGCGG+CGG | - | chr8_4:17461312-17461331 | Msa1316600:CDS | 60.0% | |
| CCACCTTATGGCAGCGGCGG+CGG | - | chr8_4:17461315-17461334 | Msa1316600:CDS | 70.0% | |
| TCACCGCCGCCGCTGCCATA+AGG | + | chr8_4:17461321-17461340 | None:intergenic | 70.0% | |
| CCGCCGCCGCTGCCATAAGG+TGG | + | chr8_4:17461318-17461337 | None:intergenic | 75.0% | |
| ! | GGCAGCGGCGGCGGTGACGA+CGG | - | chr8_4:17461324-17461343 | Msa1316600:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 17456337 | 17461467 | 17456337 | ID=Msa1316600;Name=Msa1316600 |
| chr8_4 | mRNA | 17456337 | 17461467 | 17456337 | ID=Msa1316600-mRNA-1;Parent=Msa1316600;Name=Msa1316600-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0|0|1|1|1|2|0|325 |
| chr8_4 | exon | 17460729 | 17461467 | 17460729 | ID=Msa1316600-mRNA-1:exon:6380;Parent=Msa1316600-mRNA-1 |
| chr8_4 | exon | 17456337 | 17456575 | 17456337 | ID=Msa1316600-mRNA-1:exon:6379;Parent=Msa1316600-mRNA-1 |
| chr8_4 | CDS | 17460729 | 17461467 | 17460729 | ID=Msa1316600-mRNA-1:cds;Parent=Msa1316600-mRNA-1 |
| chr8_4 | CDS | 17456337 | 17456575 | 17456337 | ID=Msa1316600-mRNA-1:cds;Parent=Msa1316600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
