Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1320690 | XP_004510954.1 | 54.491 | 668 | 177 | 10 | 7 | 548 | 1 | 667 | 0.0 | 588 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1320690 | sp|Q10EL1|C3H24_ORYSJ | 40.267 | 375 | 157 | 13 | 215 | 524 | 331 | 703 | 1.33e-59 | 214 |
| Msa1320690 | sp|Q10EL1|C3H24_ORYSJ | 48.026 | 152 | 74 | 1 | 9 | 160 | 58 | 204 | 4.02e-27 | 119 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1320690 | A0A1S2YWC5 | 54.491 | 668 | 177 | 10 | 7 | 548 | 1 | 667 | 0.0 | 588 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1320690 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1320690 | MtrunA17_Chr1g0171151 | 61.889 | 593 | 107 | 8 | 3 | 476 | 13 | 605 | 0.0 | 582 |
| Msa1320690 | MtrunA17_Chr7g0257831 | 37.890 | 673 | 258 | 24 | 7 | 534 | 33 | 690 | 8.18e-102 | 323 |
| Msa1320690 | MtrunA17_Chr3g0088521 | 45.729 | 398 | 148 | 12 | 215 | 547 | 314 | 708 | 1.17e-83 | 275 |
| Msa1320690 | MtrunA17_Chr3g0088521 | 59.195 | 174 | 65 | 3 | 3 | 172 | 27 | 198 | 2.86e-48 | 178 |
| Msa1320690 | MtrunA17_Chr5g0437251 | 35.127 | 316 | 158 | 5 | 21 | 292 | 30 | 342 | 1.12e-49 | 182 |
| Msa1320690 | MtrunA17_Chr5g0430211 | 35.276 | 326 | 158 | 4 | 21 | 294 | 35 | 359 | 2.63e-46 | 172 |
| Msa1320690 | MtrunA17_Chr1g0187591 | 34.713 | 314 | 151 | 6 | 20 | 280 | 32 | 344 | 8.54e-45 | 167 |
| Msa1320690 | MtrunA17_Chr3g0113651 | 36.232 | 276 | 153 | 6 | 20 | 279 | 9 | 277 | 1.34e-44 | 165 |
| Msa1320690 | MtrunA17_Chr3g0092171 | 34.217 | 415 | 162 | 16 | 5 | 340 | 67 | 449 | 2.40e-43 | 161 |
| Msa1320690 | MtrunA17_Chr3g0105101 | 37.063 | 286 | 155 | 8 | 7 | 282 | 11 | 281 | 5.34e-40 | 150 |
| Msa1320690 | MtrunA17_Chr3g0105131 | 30.556 | 468 | 287 | 13 | 42 | 493 | 37 | 482 | 2.09e-37 | 144 |
| Msa1320690 | MtrunA17_Chr3g0092221 | 41.176 | 153 | 70 | 2 | 215 | 347 | 208 | 360 | 2.46e-27 | 114 |
| Msa1320690 | MtrunA17_Chr3g0105141 | 54.386 | 57 | 26 | 0 | 215 | 271 | 87 | 143 | 2.85e-18 | 82.4 |
| Msa1320690 | MtrunA17_Chr6g0487481 | 61.111 | 54 | 21 | 0 | 215 | 268 | 153 | 206 | 3.55e-18 | 86.7 |
| Msa1320690 | MtrunA17_Chr8g0389561 | 52.308 | 65 | 31 | 0 | 215 | 279 | 131 | 195 | 5.81e-18 | 85.9 |
| Msa1320690 | MtrunA17_Chr2g0324781 | 53.571 | 56 | 26 | 0 | 215 | 270 | 127 | 182 | 1.52e-17 | 85.1 |
| Msa1320690 | MtrunA17_Chr3g0105121 | 31.868 | 182 | 92 | 5 | 214 | 363 | 59 | 240 | 8.02e-17 | 82.4 |
| Msa1320690 | MtrunA17_Chr3g0135351 | 52.632 | 57 | 27 | 0 | 212 | 268 | 101 | 157 | 4.43e-16 | 79.0 |
| Msa1320690 | MtrunA17_Chr4g0040391 | 46.296 | 54 | 29 | 0 | 215 | 268 | 110 | 163 | 2.98e-14 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1320690 | AT5G12850.1 | 39.189 | 370 | 145 | 15 | 215 | 522 | 307 | 658 | 1.67e-55 | 199 |
| Msa1320690 | AT5G12850.1 | 50.000 | 144 | 70 | 1 | 17 | 160 | 38 | 179 | 4.11e-38 | 149 |
| Msa1320690 | AT5G58620.1 | 30.354 | 593 | 304 | 16 | 18 | 520 | 11 | 584 | 5.75e-55 | 196 |
| Msa1320690 | AT2G40140.2 | 29.016 | 610 | 304 | 17 | 2 | 534 | 12 | 569 | 2.28e-54 | 194 |
| Msa1320690 | AT2G40140.1 | 29.016 | 610 | 304 | 17 | 2 | 534 | 12 | 569 | 2.28e-54 | 194 |
| Msa1320690 | AT2G41900.1 | 39.744 | 390 | 141 | 16 | 215 | 533 | 311 | 677 | 3.70e-54 | 195 |
| Msa1320690 | AT2G41900.1 | 50.968 | 155 | 75 | 1 | 6 | 160 | 33 | 186 | 2.07e-44 | 167 |
| Msa1320690 | AT3G55980.1 | 34.385 | 317 | 164 | 6 | 21 | 299 | 30 | 340 | 1.01e-47 | 175 |
| Msa1320690 | AT3G55980.2 | 34.385 | 317 | 164 | 6 | 21 | 299 | 97 | 407 | 1.90e-47 | 175 |
| Msa1320690 | AT2G25900.2 | 58.929 | 56 | 23 | 0 | 215 | 270 | 140 | 195 | 4.73e-20 | 91.7 |
| Msa1320690 | AT2G25900.1 | 58.929 | 56 | 23 | 0 | 215 | 270 | 140 | 195 | 4.73e-20 | 91.7 |
| Msa1320690 | AT1G03790.1 | 38.889 | 126 | 65 | 3 | 164 | 280 | 79 | 201 | 3.00e-18 | 87.4 |
| Msa1320690 | AT2G19810.1 | 52.632 | 57 | 27 | 0 | 215 | 271 | 128 | 184 | 1.57e-17 | 84.7 |
| Msa1320690 | AT4G29190.1 | 52.727 | 55 | 26 | 0 | 215 | 269 | 129 | 183 | 1.39e-16 | 82.0 |
| Msa1320690 | AT5G44260.1 | 49.231 | 65 | 30 | 1 | 206 | 270 | 105 | 166 | 6.42e-16 | 80.1 |
| Msa1320690 | AT5G07500.1 | 52.830 | 53 | 25 | 0 | 215 | 267 | 102 | 154 | 8.85e-14 | 71.6 |
Find 118 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACAGACCCATGGTCTTATT+TGG | 0.112209 | 8_4:+25436191 | Msa1320690:CDS |
| CCTTTCAAGCCTTGCATATT+AGG | 0.156225 | 8_4:-25434984 | None:intergenic |
| AACAACTGAGGAAGGGATTT+TGG | 0.189164 | 8_4:-25436160 | None:intergenic |
| AGACGATGCTCAACTTTCTT+TGG | 0.209782 | 8_4:-25435985 | None:intergenic |
| AGGGGACTAGTTGTGATAAA+AGG | 0.245519 | 8_4:+25435419 | Msa1320690:CDS |
| CCGTAAAAGTTTCAAGGATA+TGG | 0.276676 | 8_4:+25434545 | None:intergenic |
| CACTTCTCTTTAATCATCTT+AGG | 0.282189 | 8_4:-25436354 | None:intergenic |
| AGTTCTCGAGAAACTTCTTT+TGG | 0.284620 | 8_4:+25435007 | Msa1320690:CDS |
| AATAGATTAAATTTGTGAAT+TGG | 0.288759 | 8_4:-25436418 | None:intergenic |
| TTGATGGTTGCTGCTACTTA+TGG | 0.295175 | 8_4:+25434750 | Msa1320690:CDS |
| TGTTTCTTCTCAGTAAATTT+CGG | 0.296317 | 8_4:-25435167 | None:intergenic |
| GAGATTGGTTCAAGACTTCT+AGG | 0.304933 | 8_4:-25436051 | None:intergenic |
| GCCCTTCACTATGTTGCTTC+TGG | 0.308832 | 8_4:+25434852 | Msa1320690:CDS |
| ATGTTTGATTGGTCCGTAAA+TGG | 0.311412 | 8_4:+25436228 | Msa1320690:CDS |
| ACTTAGTTCGTCTCCATTTA+CGG | 0.315395 | 8_4:-25436241 | None:intergenic |
| GTTCAAATGTATTCTGCATT+TGG | 0.316145 | 8_4:-25436266 | None:intergenic |
| TGCTGCTGCAATGAATCTTT+TGG | 0.317820 | 8_4:+25435552 | Msa1320690:CDS |
| CAATTAACGAGGTGGGGATT+TGG | 0.323539 | 8_4:+25434676 | Msa1320690:CDS |
| AATTTAGGAAAGGGGCTTGT+AGG | 0.332058 | 8_4:+25435314 | Msa1320690:intron |
| TGAGCACAAAACTCCTTTGA+TGG | 0.333522 | 8_4:+25434734 | Msa1320690:CDS |
| TGTTGGTGACTTCTCTATTT+CGG | 0.334204 | 8_4:+25435052 | Msa1320690:CDS |
| AAGAGATCTTCAAGATTTGA+TGG | 0.337434 | 8_4:-25435829 | None:intergenic |
| ATTTGGTACTGTCGACAAAA+TGG | 0.338209 | 8_4:+25434693 | Msa1320690:CDS |
| AACTGAAGAGTGTTAGTTCT+AGG | 0.342883 | 8_4:+25436127 | Msa1320690:CDS |
| AAAATCCCTTCCTCAGTTGT+TGG | 0.358560 | 8_4:+25436162 | Msa1320690:CDS |
| TGTATGCATTTCCTCATTGC+GGG | 0.395000 | 8_4:+25436091 | Msa1320690:CDS |
| TCCTAGTTCTAGTCGGTCTA+AGG | 0.397408 | 8_4:+25435798 | Msa1320690:CDS |
| CTGCCTTCGTTAACTAGATC+TGG | 0.406650 | 8_4:+25435481 | Msa1320690:CDS |
| ACAGACCCATGGTCTTATTT+GGG | 0.407519 | 8_4:+25436192 | Msa1320690:CDS |
| TGAGGGCTCATTGAGGAGAT+TGG | 0.413555 | 8_4:-25436066 | None:intergenic |
| CATTGCTGGGTCAGAATACT+TGG | 0.414751 | 8_4:-25435875 | None:intergenic |
| AATCTAGCAGAAGATGTGAT+AGG | 0.419792 | 8_4:-25436390 | None:intergenic |
| CCTAATATGCAAGGCTTGAA+AGG | 0.433365 | 8_4:+25434984 | Msa1320690:CDS |
| CGTCAGCCGTAAAAGTTTCA+AGG | 0.438787 | 8_4:+25434539 | None:intergenic |
| GGCGACACTGAAGGAGAGTA+TGG | 0.454326 | 8_4:-25435125 | None:intergenic |
| CGCCTAATGAGATGTTTGAT+TGG | 0.454473 | 8_4:+25436217 | Msa1320690:CDS |
| TCAATTGGTGTCCCTTCATT+CGG | 0.455164 | 8_4:+25436018 | Msa1320690:CDS |
| GGGGACTAGTTGTGATAAAA+GGG | 0.457864 | 8_4:+25435420 | Msa1320690:CDS |
| CGTCTGTCACAGTCTTCAAT+TGG | 0.460123 | 8_4:+25436003 | Msa1320690:CDS |
| GGAACAACGATGACATCAAC+AGG | 0.461567 | 8_4:-25434960 | None:intergenic |
| CTTCACTATGTTGCTTCTGG+TGG | 0.463871 | 8_4:+25434855 | Msa1320690:CDS |
| TGGTAGTATTGATGTTATGA+AGG | 0.465621 | 8_4:+25434770 | Msa1320690:CDS |
| ACGAAGAGCCTCATCTATCA+TGG | 0.468682 | 8_4:+25436304 | Msa1320690:CDS |
| TTCACTATGTTGCTTCTGGT+GGG | 0.469531 | 8_4:+25434856 | Msa1320690:CDS |
| ATGTGCTGAGCTATTTAGAT+TGG | 0.473706 | 8_4:+25435731 | Msa1320690:CDS |
| GAGGAAATGCATACATTTGA+GGG | 0.476358 | 8_4:-25436083 | None:intergenic |
| AGGATTCCTTCAGTAGGACT+TGG | 0.476658 | 8_4:-25436329 | None:intergenic |
| TGCTCAACTTTCTTTGGAGA+GGG | 0.484541 | 8_4:-25435979 | None:intergenic |
| CGAAGCAAGTACTAGTAAGC+TGG | 0.486150 | 8_4:-25434601 | None:intergenic |
| TGAGGAAATGCATACATTTG+AGG | 0.493617 | 8_4:-25436084 | None:intergenic |
| ATAGCTCAGCACATTGAAGT+TGG | 0.494530 | 8_4:-25435722 | None:intergenic |
| TCGAACACGACTCTGTAAAG+AGG | 0.495482 | 8_4:+25435399 | Msa1320690:CDS |
| GAGGGCATATTAGTATTTGA+AGG | 0.496572 | 8_4:-25435961 | None:intergenic |
| TTGAGCTGTTTCTCAAAAGC+CGG | 0.496747 | 8_4:+25435775 | Msa1320690:CDS |
| GCCTCTGATAATAGATCTGT+TGG | 0.506636 | 8_4:+25435035 | Msa1320690:CDS |
| AGGAAAGGGGCTTGTAGGCA+TGG | 0.515731 | 8_4:+25435319 | Msa1320690:intron |
| CTCATGGAATATTCAAGTGT+TGG | 0.516790 | 8_4:+25435359 | Msa1320690:CDS |
| CTTCTTCAATTAACGAGGTG+GGG | 0.517672 | 8_4:+25434670 | Msa1320690:CDS |
| GCGAAGATTCTTATATCTGC+GGG | 0.517780 | 8_4:+25434900 | Msa1320690:CDS |
| AACAGCTCAAGTCACTCATA+AGG | 0.519911 | 8_4:-25435762 | None:intergenic |
| TTCAAGCCTTGCATATTAGG+AGG | 0.531465 | 8_4:-25434981 | None:intergenic |
| GCTTCTTCAATTAACGAGGT+GGG | 0.531800 | 8_4:+25434669 | Msa1320690:CDS |
| CTCTTTAATCATCTTAGGTG+AGG | 0.532869 | 8_4:-25436349 | None:intergenic |
| ATCTAGCAGAAGATGTGATA+GGG | 0.545866 | 8_4:-25436389 | None:intergenic |
| GAAGCAAGTACTAGTAAGCT+GGG | 0.551582 | 8_4:-25434600 | None:intergenic |
| ACTGAAGAGTGTTAGTTCTA+GGG | 0.551618 | 8_4:+25436128 | Msa1320690:CDS |
| GGTGATCCAACAACTGAGGA+AGG | 0.555330 | 8_4:-25436168 | None:intergenic |
| GACCAATCAAACATCTCATT+AGG | 0.557481 | 8_4:-25436219 | None:intergenic |
| TAGCAGCTGATTCACGTGAA+GGG | 0.557874 | 8_4:-25435912 | None:intergenic |
| ATGCTCAACTTTCTTTGGAG+AGG | 0.560040 | 8_4:-25435980 | None:intergenic |
| TAAGTAGCAGCAACCATCAA+AGG | 0.566012 | 8_4:-25434747 | None:intergenic |
| CGAACACGACTCTGTAAAGA+GGG | 0.566742 | 8_4:+25435400 | Msa1320690:CDS |
| GCCTTAGACCGACTAGAACT+AGG | 0.573068 | 8_4:-25435799 | None:intergenic |
| GGTGACATGCTACCGAATGA+AGG | 0.573431 | 8_4:-25436030 | None:intergenic |
| AAATAAGACCATGGGTCTGT+AGG | 0.574531 | 8_4:-25436189 | None:intergenic |
| TTCGGATCCACTACAAGAGA+AGG | 0.576380 | 8_4:-25435149 | None:intergenic |
| GTTAGTTGTGTCGATAGCAA+TGG | 0.577902 | 8_4:+25434930 | Msa1320690:CDS |
| AGCAGCTGATTCACGTGAAG+GGG | 0.579111 | 8_4:-25435911 | None:intergenic |
| GCTTCGTACAATGACTCTGA+AGG | 0.579529 | 8_4:+25434618 | Msa1320690:CDS |
| ATAGCAGCTGATTCACGTGA+AGG | 0.579797 | 8_4:-25435913 | None:intergenic |
| AGCTTCTTCAATTAACGAGG+TGG | 0.579937 | 8_4:+25434668 | Msa1320690:CDS |
| ATGTATGCATTTCCTCATTG+CGG | 0.580905 | 8_4:+25436090 | Msa1320690:CDS |
| TTGCCCTGAATTTAGGAAAG+GGG | 0.586309 | 8_4:+25435306 | Msa1320690:intron |
| GATAAGTGTGAATATGCTCA+TGG | 0.587938 | 8_4:+25435343 | Msa1320690:CDS |
| GTTGTTCCTCCTAATATGCA+AGG | 0.592085 | 8_4:+25434975 | Msa1320690:CDS |
| GTCGCCGCCTTCTCTTGTAG+TGG | 0.592373 | 8_4:+25435142 | Msa1320690:CDS |
| CACACGATGAAAAGGAATTG+AGG | 0.594718 | 8_4:+25435455 | Msa1320690:CDS |
| GTGACATGCTACCGAATGAA+GGG | 0.596307 | 8_4:-25436029 | None:intergenic |
| AGAGAAGGCGGCGACACTGA+AGG | 0.596334 | 8_4:-25435134 | None:intergenic |
| CGAAGAGCCTCATCTATCAT+GGG | 0.597163 | 8_4:+25436305 | Msa1320690:CDS |
| CACCAGAAGCAACATAGTGA+AGG | 0.600552 | 8_4:-25434854 | None:intergenic |
| GGCGATCCCAAATAAGACCA+TGG | 0.600972 | 8_4:-25436198 | None:intergenic |
| AGTGTTAGTTCTAGGGAACT+CGG | 0.601888 | 8_4:+25436135 | Msa1320690:CDS |
| CAAGTATTCTGACCCAGCAA+TGG | 0.604078 | 8_4:+25435876 | Msa1320690:CDS |
| TAGGTGAGGATTCCTTCAGT+AGG | 0.610956 | 8_4:-25436335 | None:intergenic |
| AGACCGACTAGAACTAGGAC+CGG | 0.611965 | 8_4:-25435794 | None:intergenic |
| GTCCATCGCATTAAAAGCAG+AGG | 0.612380 | 8_4:-25435527 | None:intergenic |
| TGCGAAGATTCTTATATCTG+CGG | 0.614268 | 8_4:+25434899 | Msa1320690:CDS |
| GCGATCCCAAATAAGACCAT+GGG | 0.615642 | 8_4:-25436197 | None:intergenic |
| ATGGGTCCAAGTCCTACTGA+AGG | 0.618676 | 8_4:+25436323 | Msa1320690:CDS |
| ACCAGAAGCAACATAGTGAA+GGG | 0.629252 | 8_4:-25434853 | None:intergenic |
| GAGGCAGATGAACATGGTGA+AGG | 0.635941 | 8_4:-25435508 | None:intergenic |
| AGTCGTGTTCGATACTGATG+TGG | 0.638739 | 8_4:-25435388 | None:intergenic |
| ACCAACAGATCTATTATCAG+AGG | 0.639774 | 8_4:-25435036 | None:intergenic |
| AAGCCGGTCCTAGTTCTAGT+CGG | 0.644175 | 8_4:+25435791 | Msa1320690:CDS |
| TTGGATCACCTACAGACCCA+TGG | 0.648746 | 8_4:+25436181 | Msa1320690:CDS |
| AAAGCAGAGGCAGATGAACA+TGG | 0.655402 | 8_4:-25435514 | None:intergenic |
| TGCTGCTGTTTCCCGCAATG+AGG | 0.662922 | 8_4:-25436102 | None:intergenic |
| GTGATCCAACAACTGAGGAA+GGG | 0.664346 | 8_4:-25436167 | None:intergenic |
| ACTTGGACCCATGATAGATG+AGG | 0.665852 | 8_4:-25436312 | None:intergenic |
| AGGAGCTTCTTCAATTAACG+AGG | 0.677801 | 8_4:+25434665 | Msa1320690:CDS |
| GTCGTGTTCGATACTGATGT+GGG | 0.690047 | 8_4:-25435387 | None:intergenic |
| ATACATTTGAGGGCTCATTG+AGG | 0.695981 | 8_4:-25436073 | None:intergenic |
| GGATCCACTACAAGAGAAGG+CGG | 0.703662 | 8_4:-25435146 | None:intergenic |
| TGTAGGTGATCCAACAACTG+AGG | 0.709385 | 8_4:-25436172 | None:intergenic |
| ACACCAGATCTAGTTAACGA+AGG | 0.718756 | 8_4:-25435484 | None:intergenic |
| ATTTGAACATAAAATAAACG+AGG | 0.729185 | 8_4:+25436281 | Msa1320690:CDS |
| GAACACGACTCTGTAAAGAG+GGG | 0.748627 | 8_4:+25435401 | Msa1320690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATAAAAGGGTATTTTTTT+TGG | + | chr8_4:25435432-25435451 | Msa1320690:CDS | 20.0% |
| !! | ATTTGAACATAAAATAAACG+AGG | + | chr8_4:25436281-25436300 | Msa1320690:CDS | 20.0% |
| !!! | TGATAAAAGGGTATTTTTTT+TGG | + | chr8_4:25435432-25435451 | Msa1320690:CDS | 20.0% |
| !! | ATTTGAACATAAAATAAACG+AGG | + | chr8_4:25436281-25436300 | Msa1320690:CDS | 20.0% |
| !! | AAGCTTCTTTTAAACAAAGA+AGG | + | chr8_4:25434645-25434664 | Msa1320690:CDS | 25.0% |
| ! | TGTTTCTTCTCAGTAAATTT+CGG | - | chr8_4:25435170-25435189 | None:intergenic | 25.0% |
| !!! | ATACAAGTTGTTTTTATACC+AGG | - | chr8_4:25435215-25435234 | None:intergenic | 25.0% |
| !! | AAGCTTCTTTTAAACAAAGA+AGG | + | chr8_4:25434645-25434664 | Msa1320690:CDS | 25.0% |
| ! | TGTTTCTTCTCAGTAAATTT+CGG | - | chr8_4:25435170-25435189 | None:intergenic | 25.0% |
| !!! | ATACAAGTTGTTTTTATACC+AGG | - | chr8_4:25435215-25435234 | None:intergenic | 25.0% |
| !! | TGGTAGTATTGATGTTATGA+AGG | + | chr8_4:25434770-25434789 | Msa1320690:CDS | 30.0% |
| !!! | TCTGTTGATTCTTTTAGTTC+TGG | + | chr8_4:25435077-25435096 | Msa1320690:CDS | 30.0% |
| !!! | AGTTCTGGTTTTCTTGAAAA+TGG | + | chr8_4:25435092-25435111 | Msa1320690:CDS | 30.0% |
| !!! | GTTCTGGTTTTCTTGAAAAT+GGG | + | chr8_4:25435093-25435112 | Msa1320690:CDS | 30.0% |
| ! | GTTTTTATACCAGGAAATGA+TGG | - | chr8_4:25435206-25435225 | None:intergenic | 30.0% |
| GGAAAAATTAGGTTTATGCA+CGG | - | chr8_4:25435602-25435621 | None:intergenic | 30.0% | |
| ! | GAAGCAATTTTCAATCTAGT+CGG | + | chr8_4:25435685-25435704 | Msa1320690:CDS | 30.0% |
| ! | AATTTTCAATCTAGTCGGTT+GGG | + | chr8_4:25435690-25435709 | Msa1320690:CDS | 30.0% |
| AAGAGATCTTCAAGATTTGA+TGG | - | chr8_4:25435832-25435851 | None:intergenic | 30.0% | |
| GTTCAAATGTATTCTGCATT+TGG | - | chr8_4:25436269-25436288 | None:intergenic | 30.0% | |
| CACTTCTCTTTAATCATCTT+AGG | - | chr8_4:25436357-25436376 | None:intergenic | 30.0% | |
| !! | TGGTAGTATTGATGTTATGA+AGG | + | chr8_4:25434770-25434789 | Msa1320690:CDS | 30.0% |
| !!! | TCTGTTGATTCTTTTAGTTC+TGG | + | chr8_4:25435077-25435096 | Msa1320690:CDS | 30.0% |
| !!! | AGTTCTGGTTTTCTTGAAAA+TGG | + | chr8_4:25435092-25435111 | Msa1320690:CDS | 30.0% |
| !!! | GTTCTGGTTTTCTTGAAAAT+GGG | + | chr8_4:25435093-25435112 | Msa1320690:CDS | 30.0% |
| ! | GTTTTTATACCAGGAAATGA+TGG | - | chr8_4:25435206-25435225 | None:intergenic | 30.0% |
| GGAAAAATTAGGTTTATGCA+CGG | - | chr8_4:25435602-25435621 | None:intergenic | 30.0% | |
| ! | GAAGCAATTTTCAATCTAGT+CGG | + | chr8_4:25435685-25435704 | Msa1320690:CDS | 30.0% |
| ! | AATTTTCAATCTAGTCGGTT+GGG | + | chr8_4:25435690-25435709 | Msa1320690:CDS | 30.0% |
| AAGAGATCTTCAAGATTTGA+TGG | - | chr8_4:25435832-25435851 | None:intergenic | 30.0% | |
| GTTCAAATGTATTCTGCATT+TGG | - | chr8_4:25436269-25436288 | None:intergenic | 30.0% | |
| CACTTCTCTTTAATCATCTT+AGG | - | chr8_4:25436357-25436376 | None:intergenic | 30.0% | |
| ATTTGGTACTGTCGACAAAA+TGG | + | chr8_4:25434693-25434712 | Msa1320690:CDS | 35.0% | |
| ! | GTTGATGTGAATTTTGCTTG+CGG | + | chr8_4:25434813-25434832 | Msa1320690:CDS | 35.0% |
| ! | TTGATGTGAATTTTGCTTGC+GGG | + | chr8_4:25434814-25434833 | Msa1320690:CDS | 35.0% |
| TGCGAAGATTCTTATATCTG+CGG | + | chr8_4:25434899-25434918 | Msa1320690:CDS | 35.0% | |
| ! | AGTTCTCGAGAAACTTCTTT+TGG | + | chr8_4:25435007-25435026 | Msa1320690:CDS | 35.0% |
| ACCAACAGATCTATTATCAG+AGG | - | chr8_4:25435039-25435058 | None:intergenic | 35.0% | |
| !! | TGTTGGTGACTTCTCTATTT+CGG | + | chr8_4:25435052-25435071 | Msa1320690:CDS | 35.0% |
| GATAAGTGTGAATATGCTCA+TGG | + | chr8_4:25435343-25435362 | Msa1320690:CDS | 35.0% | |
| CTCATGGAATATTCAAGTGT+TGG | + | chr8_4:25435359-25435378 | Msa1320690:CDS | 35.0% | |
| !!! | TTTTTTGGCACACGATGAAA+AGG | + | chr8_4:25435447-25435466 | Msa1320690:CDS | 35.0% |
| AGAAGAGACTGGGAAAAATT+AGG | - | chr8_4:25435613-25435632 | None:intergenic | 35.0% | |
| ! | TAATTTTTCCCAGTCTCTTC+TGG | + | chr8_4:25435612-25435631 | Msa1320690:intron | 35.0% |
| TGAGCACATCAAAATGTTCT+AGG | + | chr8_4:25435663-25435682 | Msa1320690:intron | 35.0% | |
| ! | CAATTTTCAATCTAGTCGGT+TGG | + | chr8_4:25435689-25435708 | Msa1320690:CDS | 35.0% |
| ATGTGCTGAGCTATTTAGAT+TGG | + | chr8_4:25435731-25435750 | Msa1320690:CDS | 35.0% | |
| ! | TCTTGAAGATCTCTTTTGTG+CGG | + | chr8_4:25435837-25435856 | Msa1320690:CDS | 35.0% |
| AAAAAACAGAAGCCATTGCT+GGG | - | chr8_4:25435891-25435910 | None:intergenic | 35.0% | |
| ! | GAGGGCATATTAGTATTTGA+AGG | - | chr8_4:25435964-25435983 | None:intergenic | 35.0% |
| GAGGAAATGCATACATTTGA+GGG | - | chr8_4:25436086-25436105 | None:intergenic | 35.0% | |
| TGAGGAAATGCATACATTTG+AGG | - | chr8_4:25436087-25436106 | None:intergenic | 35.0% | |
| ATGTATGCATTTCCTCATTG+CGG | + | chr8_4:25436090-25436109 | Msa1320690:CDS | 35.0% | |
| !! | AACTGAAGAGTGTTAGTTCT+AGG | + | chr8_4:25436127-25436146 | Msa1320690:CDS | 35.0% |
| !! | ACTGAAGAGTGTTAGTTCTA+GGG | + | chr8_4:25436128-25436147 | Msa1320690:CDS | 35.0% |
| GACCAATCAAACATCTCATT+AGG | - | chr8_4:25436222-25436241 | None:intergenic | 35.0% | |
| ! | ATGTTTGATTGGTCCGTAAA+TGG | + | chr8_4:25436228-25436247 | Msa1320690:CDS | 35.0% |
| ACTTAGTTCGTCTCCATTTA+CGG | - | chr8_4:25436244-25436263 | None:intergenic | 35.0% | |
| CTCTTTAATCATCTTAGGTG+AGG | - | chr8_4:25436352-25436371 | None:intergenic | 35.0% | |
| ATCTAGCAGAAGATGTGATA+GGG | - | chr8_4:25436392-25436411 | None:intergenic | 35.0% | |
| AATCTAGCAGAAGATGTGAT+AGG | - | chr8_4:25436393-25436412 | None:intergenic | 35.0% | |
| ATTTGGTACTGTCGACAAAA+TGG | + | chr8_4:25434693-25434712 | Msa1320690:CDS | 35.0% | |
| ! | GTTGATGTGAATTTTGCTTG+CGG | + | chr8_4:25434813-25434832 | Msa1320690:CDS | 35.0% |
| ! | TTGATGTGAATTTTGCTTGC+GGG | + | chr8_4:25434814-25434833 | Msa1320690:CDS | 35.0% |
| TGCGAAGATTCTTATATCTG+CGG | + | chr8_4:25434899-25434918 | Msa1320690:CDS | 35.0% | |
| ! | AGTTCTCGAGAAACTTCTTT+TGG | + | chr8_4:25435007-25435026 | Msa1320690:CDS | 35.0% |
| ACCAACAGATCTATTATCAG+AGG | - | chr8_4:25435039-25435058 | None:intergenic | 35.0% | |
| !! | TGTTGGTGACTTCTCTATTT+CGG | + | chr8_4:25435052-25435071 | Msa1320690:CDS | 35.0% |
| GATAAGTGTGAATATGCTCA+TGG | + | chr8_4:25435343-25435362 | Msa1320690:CDS | 35.0% | |
| CTCATGGAATATTCAAGTGT+TGG | + | chr8_4:25435359-25435378 | Msa1320690:CDS | 35.0% | |
| !!! | TTTTTTGGCACACGATGAAA+AGG | + | chr8_4:25435447-25435466 | Msa1320690:CDS | 35.0% |
| AGAAGAGACTGGGAAAAATT+AGG | - | chr8_4:25435613-25435632 | None:intergenic | 35.0% | |
| ! | TAATTTTTCCCAGTCTCTTC+TGG | + | chr8_4:25435612-25435631 | Msa1320690:intron | 35.0% |
| TGAGCACATCAAAATGTTCT+AGG | + | chr8_4:25435663-25435682 | Msa1320690:intron | 35.0% | |
| ! | CAATTTTCAATCTAGTCGGT+TGG | + | chr8_4:25435689-25435708 | Msa1320690:CDS | 35.0% |
| ATGTGCTGAGCTATTTAGAT+TGG | + | chr8_4:25435731-25435750 | Msa1320690:CDS | 35.0% | |
| ! | TCTTGAAGATCTCTTTTGTG+CGG | + | chr8_4:25435837-25435856 | Msa1320690:CDS | 35.0% |
| AAAAAACAGAAGCCATTGCT+GGG | - | chr8_4:25435891-25435910 | None:intergenic | 35.0% | |
| ! | GAGGGCATATTAGTATTTGA+AGG | - | chr8_4:25435964-25435983 | None:intergenic | 35.0% |
| GAGGAAATGCATACATTTGA+GGG | - | chr8_4:25436086-25436105 | None:intergenic | 35.0% | |
| TGAGGAAATGCATACATTTG+AGG | - | chr8_4:25436087-25436106 | None:intergenic | 35.0% | |
| ATGTATGCATTTCCTCATTG+CGG | + | chr8_4:25436090-25436109 | Msa1320690:CDS | 35.0% | |
| !! | AACTGAAGAGTGTTAGTTCT+AGG | + | chr8_4:25436127-25436146 | Msa1320690:CDS | 35.0% |
| !! | ACTGAAGAGTGTTAGTTCTA+GGG | + | chr8_4:25436128-25436147 | Msa1320690:CDS | 35.0% |
| GACCAATCAAACATCTCATT+AGG | - | chr8_4:25436222-25436241 | None:intergenic | 35.0% | |
| ! | ATGTTTGATTGGTCCGTAAA+TGG | + | chr8_4:25436228-25436247 | Msa1320690:CDS | 35.0% |
| ACTTAGTTCGTCTCCATTTA+CGG | - | chr8_4:25436244-25436263 | None:intergenic | 35.0% | |
| CTCTTTAATCATCTTAGGTG+AGG | - | chr8_4:25436352-25436371 | None:intergenic | 35.0% | |
| ATCTAGCAGAAGATGTGATA+GGG | - | chr8_4:25436392-25436411 | None:intergenic | 35.0% | |
| AATCTAGCAGAAGATGTGAT+AGG | - | chr8_4:25436393-25436412 | None:intergenic | 35.0% | |
| GAAGCAAGTACTAGTAAGCT+GGG | - | chr8_4:25434603-25434622 | None:intergenic | 40.0% | |
| AGGAGCTTCTTCAATTAACG+AGG | + | chr8_4:25434665-25434684 | Msa1320690:CDS | 40.0% | |
| AGCTTCTTCAATTAACGAGG+TGG | + | chr8_4:25434668-25434687 | Msa1320690:CDS | 40.0% | |
| GCTTCTTCAATTAACGAGGT+GGG | + | chr8_4:25434669-25434688 | Msa1320690:CDS | 40.0% | |
| CTTCTTCAATTAACGAGGTG+GGG | + | chr8_4:25434670-25434689 | Msa1320690:CDS | 40.0% | |
| TGAGCACAAAACTCCTTTGA+TGG | + | chr8_4:25434734-25434753 | Msa1320690:CDS | 40.0% | |
| TAAGTAGCAGCAACCATCAA+AGG | - | chr8_4:25434750-25434769 | None:intergenic | 40.0% | |
| ! | TTGATGGTTGCTGCTACTTA+TGG | + | chr8_4:25434750-25434769 | Msa1320690:CDS | 40.0% |
| ! | TGATGTGAATTTTGCTTGCG+GGG | + | chr8_4:25434815-25434834 | Msa1320690:CDS | 40.0% |
| ACCAGAAGCAACATAGTGAA+GGG | - | chr8_4:25434856-25434875 | None:intergenic | 40.0% | |
| ! | TTCACTATGTTGCTTCTGGT+GGG | + | chr8_4:25434856-25434875 | Msa1320690:CDS | 40.0% |
| GCGAAGATTCTTATATCTGC+GGG | + | chr8_4:25434900-25434919 | Msa1320690:CDS | 40.0% | |
| ! | GTTAGTTGTGTCGATAGCAA+TGG | + | chr8_4:25434930-25434949 | Msa1320690:CDS | 40.0% |
| GTTGTTCCTCCTAATATGCA+AGG | + | chr8_4:25434975-25434994 | Msa1320690:CDS | 40.0% | |
| TTCAAGCCTTGCATATTAGG+AGG | - | chr8_4:25434984-25435003 | None:intergenic | 40.0% | |
| CCTTTCAAGCCTTGCATATT+AGG | - | chr8_4:25434987-25435006 | None:intergenic | 40.0% | |
| CCTAATATGCAAGGCTTGAA+AGG | + | chr8_4:25434984-25435003 | Msa1320690:CDS | 40.0% | |
| GCCTCTGATAATAGATCTGT+TGG | + | chr8_4:25435035-25435054 | Msa1320690:CDS | 40.0% | |
| ! | AACTATAATGGAACCTCCCA+AGG | - | chr8_4:25435279-25435298 | None:intergenic | 40.0% |
| CTTGCCCTGAATTTAGGAAA+GGG | + | chr8_4:25435305-25435324 | Msa1320690:intron | 40.0% | |
| TTGCCCTGAATTTAGGAAAG+GGG | + | chr8_4:25435306-25435325 | Msa1320690:intron | 40.0% | |
| AAGCCCCTTTCCTAAATTCA+GGG | - | chr8_4:25435312-25435331 | None:intergenic | 40.0% | |
| AATTTAGGAAAGGGGCTTGT+AGG | + | chr8_4:25435314-25435333 | Msa1320690:intron | 40.0% | |
| !! | AGGGGACTAGTTGTGATAAA+AGG | + | chr8_4:25435419-25435438 | Msa1320690:CDS | 40.0% |
| !! | GGGGACTAGTTGTGATAAAA+GGG | + | chr8_4:25435420-25435439 | Msa1320690:CDS | 40.0% |
| CACACGATGAAAAGGAATTG+AGG | + | chr8_4:25435455-25435474 | Msa1320690:CDS | 40.0% | |
| ACACCAGATCTAGTTAACGA+AGG | - | chr8_4:25435487-25435506 | None:intergenic | 40.0% | |
| ! | TGCTGCTGCAATGAATCTTT+TGG | + | chr8_4:25435552-25435571 | Msa1320690:CDS | 40.0% |
| ! | GCTGCAATGAATCTTTTGGT+TGG | + | chr8_4:25435556-25435575 | Msa1320690:intron | 40.0% |
| ATAGCTCAGCACATTGAAGT+TGG | - | chr8_4:25435725-25435744 | None:intergenic | 40.0% | |
| AACAGCTCAAGTCACTCATA+AGG | - | chr8_4:25435765-25435784 | None:intergenic | 40.0% | |
| !! | TTGAGCTGTTTCTCAAAAGC+CGG | + | chr8_4:25435775-25435794 | Msa1320690:CDS | 40.0% |
| GAAAAAACAGAAGCCATTGC+TGG | - | chr8_4:25435892-25435911 | None:intergenic | 40.0% | |
| ! | TGCTCAACTTTCTTTGGAGA+GGG | - | chr8_4:25435982-25436001 | None:intergenic | 40.0% |
| ! | ATGCTCAACTTTCTTTGGAG+AGG | - | chr8_4:25435983-25436002 | None:intergenic | 40.0% |
| AGACGATGCTCAACTTTCTT+TGG | - | chr8_4:25435988-25436007 | None:intergenic | 40.0% | |
| ! | TCAATTGGTGTCCCTTCATT+CGG | + | chr8_4:25436018-25436037 | Msa1320690:CDS | 40.0% |
| ! | GAGATTGGTTCAAGACTTCT+AGG | - | chr8_4:25436054-25436073 | None:intergenic | 40.0% |
| ATACATTTGAGGGCTCATTG+AGG | - | chr8_4:25436076-25436095 | None:intergenic | 40.0% | |
| TGTATGCATTTCCTCATTGC+GGG | + | chr8_4:25436091-25436110 | Msa1320690:CDS | 40.0% | |
| !! | AGTGTTAGTTCTAGGGAACT+CGG | + | chr8_4:25436135-25436154 | Msa1320690:CDS | 40.0% |
| ! | AACAACTGAGGAAGGGATTT+TGG | - | chr8_4:25436163-25436182 | None:intergenic | 40.0% |
| AAAATCCCTTCCTCAGTTGT+TGG | + | chr8_4:25436162-25436181 | Msa1320690:CDS | 40.0% | |
| AAATAAGACCATGGGTCTGT+AGG | - | chr8_4:25436192-25436211 | None:intergenic | 40.0% | |
| !! | TACAGACCCATGGTCTTATT+TGG | + | chr8_4:25436191-25436210 | Msa1320690:CDS | 40.0% |
| !! | ACAGACCCATGGTCTTATTT+GGG | + | chr8_4:25436192-25436211 | Msa1320690:CDS | 40.0% |
| CGCCTAATGAGATGTTTGAT+TGG | + | chr8_4:25436217-25436236 | Msa1320690:CDS | 40.0% | |
| GAAGCAAGTACTAGTAAGCT+GGG | - | chr8_4:25434603-25434622 | None:intergenic | 40.0% | |
| AGGAGCTTCTTCAATTAACG+AGG | + | chr8_4:25434665-25434684 | Msa1320690:CDS | 40.0% | |
| AGCTTCTTCAATTAACGAGG+TGG | + | chr8_4:25434668-25434687 | Msa1320690:CDS | 40.0% | |
| GCTTCTTCAATTAACGAGGT+GGG | + | chr8_4:25434669-25434688 | Msa1320690:CDS | 40.0% | |
| CTTCTTCAATTAACGAGGTG+GGG | + | chr8_4:25434670-25434689 | Msa1320690:CDS | 40.0% | |
| TGAGCACAAAACTCCTTTGA+TGG | + | chr8_4:25434734-25434753 | Msa1320690:CDS | 40.0% | |
| TAAGTAGCAGCAACCATCAA+AGG | - | chr8_4:25434750-25434769 | None:intergenic | 40.0% | |
| ! | TTGATGGTTGCTGCTACTTA+TGG | + | chr8_4:25434750-25434769 | Msa1320690:CDS | 40.0% |
| ! | TGATGTGAATTTTGCTTGCG+GGG | + | chr8_4:25434815-25434834 | Msa1320690:CDS | 40.0% |
| ACCAGAAGCAACATAGTGAA+GGG | - | chr8_4:25434856-25434875 | None:intergenic | 40.0% | |
| ! | TTCACTATGTTGCTTCTGGT+GGG | + | chr8_4:25434856-25434875 | Msa1320690:CDS | 40.0% |
| GCGAAGATTCTTATATCTGC+GGG | + | chr8_4:25434900-25434919 | Msa1320690:CDS | 40.0% | |
| ! | GTTAGTTGTGTCGATAGCAA+TGG | + | chr8_4:25434930-25434949 | Msa1320690:CDS | 40.0% |
| GTTGTTCCTCCTAATATGCA+AGG | + | chr8_4:25434975-25434994 | Msa1320690:CDS | 40.0% | |
| TTCAAGCCTTGCATATTAGG+AGG | - | chr8_4:25434984-25435003 | None:intergenic | 40.0% | |
| CCTTTCAAGCCTTGCATATT+AGG | - | chr8_4:25434987-25435006 | None:intergenic | 40.0% | |
| CCTAATATGCAAGGCTTGAA+AGG | + | chr8_4:25434984-25435003 | Msa1320690:CDS | 40.0% | |
| GCCTCTGATAATAGATCTGT+TGG | + | chr8_4:25435035-25435054 | Msa1320690:CDS | 40.0% | |
| ! | AACTATAATGGAACCTCCCA+AGG | - | chr8_4:25435279-25435298 | None:intergenic | 40.0% |
| CTTGCCCTGAATTTAGGAAA+GGG | + | chr8_4:25435305-25435324 | Msa1320690:intron | 40.0% | |
| TTGCCCTGAATTTAGGAAAG+GGG | + | chr8_4:25435306-25435325 | Msa1320690:intron | 40.0% | |
| AAGCCCCTTTCCTAAATTCA+GGG | - | chr8_4:25435312-25435331 | None:intergenic | 40.0% | |
| AATTTAGGAAAGGGGCTTGT+AGG | + | chr8_4:25435314-25435333 | Msa1320690:intron | 40.0% | |
| !! | AGGGGACTAGTTGTGATAAA+AGG | + | chr8_4:25435419-25435438 | Msa1320690:CDS | 40.0% |
| !! | GGGGACTAGTTGTGATAAAA+GGG | + | chr8_4:25435420-25435439 | Msa1320690:CDS | 40.0% |
| CACACGATGAAAAGGAATTG+AGG | + | chr8_4:25435455-25435474 | Msa1320690:CDS | 40.0% | |
| ACACCAGATCTAGTTAACGA+AGG | - | chr8_4:25435487-25435506 | None:intergenic | 40.0% | |
| ! | TGCTGCTGCAATGAATCTTT+TGG | + | chr8_4:25435552-25435571 | Msa1320690:CDS | 40.0% |
| ! | GCTGCAATGAATCTTTTGGT+TGG | + | chr8_4:25435556-25435575 | Msa1320690:intron | 40.0% |
| ATAGCTCAGCACATTGAAGT+TGG | - | chr8_4:25435725-25435744 | None:intergenic | 40.0% | |
| AACAGCTCAAGTCACTCATA+AGG | - | chr8_4:25435765-25435784 | None:intergenic | 40.0% | |
| !! | TTGAGCTGTTTCTCAAAAGC+CGG | + | chr8_4:25435775-25435794 | Msa1320690:CDS | 40.0% |
| GAAAAAACAGAAGCCATTGC+TGG | - | chr8_4:25435892-25435911 | None:intergenic | 40.0% | |
| ! | TGCTCAACTTTCTTTGGAGA+GGG | - | chr8_4:25435982-25436001 | None:intergenic | 40.0% |
| ! | ATGCTCAACTTTCTTTGGAG+AGG | - | chr8_4:25435983-25436002 | None:intergenic | 40.0% |
| AGACGATGCTCAACTTTCTT+TGG | - | chr8_4:25435988-25436007 | None:intergenic | 40.0% | |
| ! | TCAATTGGTGTCCCTTCATT+CGG | + | chr8_4:25436018-25436037 | Msa1320690:CDS | 40.0% |
| ! | GAGATTGGTTCAAGACTTCT+AGG | - | chr8_4:25436054-25436073 | None:intergenic | 40.0% |
| ATACATTTGAGGGCTCATTG+AGG | - | chr8_4:25436076-25436095 | None:intergenic | 40.0% | |
| TGTATGCATTTCCTCATTGC+GGG | + | chr8_4:25436091-25436110 | Msa1320690:CDS | 40.0% | |
| !! | AGTGTTAGTTCTAGGGAACT+CGG | + | chr8_4:25436135-25436154 | Msa1320690:CDS | 40.0% |
| ! | AACAACTGAGGAAGGGATTT+TGG | - | chr8_4:25436163-25436182 | None:intergenic | 40.0% |
| AAAATCCCTTCCTCAGTTGT+TGG | + | chr8_4:25436162-25436181 | Msa1320690:CDS | 40.0% | |
| AAATAAGACCATGGGTCTGT+AGG | - | chr8_4:25436192-25436211 | None:intergenic | 40.0% | |
| !! | TACAGACCCATGGTCTTATT+TGG | + | chr8_4:25436191-25436210 | Msa1320690:CDS | 40.0% |
| !! | ACAGACCCATGGTCTTATTT+GGG | + | chr8_4:25436192-25436211 | Msa1320690:CDS | 40.0% |
| CGCCTAATGAGATGTTTGAT+TGG | + | chr8_4:25436217-25436236 | Msa1320690:CDS | 40.0% | |
| CGAAGCAAGTACTAGTAAGC+TGG | - | chr8_4:25434604-25434623 | None:intergenic | 45.0% | |
| GCTTCGTACAATGACTCTGA+AGG | + | chr8_4:25434618-25434637 | Msa1320690:CDS | 45.0% | |
| CAATTAACGAGGTGGGGATT+TGG | + | chr8_4:25434676-25434695 | Msa1320690:CDS | 45.0% | |
| CACCAGAAGCAACATAGTGA+AGG | - | chr8_4:25434857-25434876 | None:intergenic | 45.0% | |
| ! | CTTCACTATGTTGCTTCTGG+TGG | + | chr8_4:25434855-25434874 | Msa1320690:CDS | 45.0% |
| GGAACAACGATGACATCAAC+AGG | - | chr8_4:25434963-25434982 | None:intergenic | 45.0% | |
| TTCGGATCCACTACAAGAGA+AGG | - | chr8_4:25435152-25435171 | None:intergenic | 45.0% | |
| !! | CCAGGAAATGATGGATCTAC+TGG | - | chr8_4:25435197-25435216 | None:intergenic | 45.0% |
| CCAGTAGATCCATCATTTCC+TGG | + | chr8_4:25435194-25435213 | Msa1320690:intron | 45.0% | |
| CCTTTCCTAAATTCAGGGCA+AGG | - | chr8_4:25435307-25435326 | None:intergenic | 45.0% | |
| CCTTGCCCTGAATTTAGGAA+AGG | + | chr8_4:25435304-25435323 | Msa1320690:intron | 45.0% | |
| CAAGCCCCTTTCCTAAATTC+AGG | - | chr8_4:25435313-25435332 | None:intergenic | 45.0% | |
| GTCGTGTTCGATACTGATGT+GGG | - | chr8_4:25435390-25435409 | None:intergenic | 45.0% | |
| AGTCGTGTTCGATACTGATG+TGG | - | chr8_4:25435391-25435410 | None:intergenic | 45.0% | |
| TCGAACACGACTCTGTAAAG+AGG | + | chr8_4:25435399-25435418 | Msa1320690:CDS | 45.0% | |
| CGAACACGACTCTGTAAAGA+GGG | + | chr8_4:25435400-25435419 | Msa1320690:CDS | 45.0% | |
| GAACACGACTCTGTAAAGAG+GGG | + | chr8_4:25435401-25435420 | Msa1320690:CDS | 45.0% | |
| CTGCCTTCGTTAACTAGATC+TGG | + | chr8_4:25435481-25435500 | Msa1320690:CDS | 45.0% | |
| AAAGCAGAGGCAGATGAACA+TGG | - | chr8_4:25435517-25435536 | None:intergenic | 45.0% | |
| !! | TGCCTCTGCTTTTAATGCGA+TGG | + | chr8_4:25435525-25435544 | Msa1320690:CDS | 45.0% |
| GTCCATCGCATTAAAAGCAG+AGG | - | chr8_4:25435530-25435549 | None:intergenic | 45.0% | |
| TTATGCACGGAAGAGACTGA+CGG | - | chr8_4:25435589-25435608 | None:intergenic | 45.0% | |
| ! | TTCCCAGTCTCTTCTGGAAA+TGG | + | chr8_4:25435618-25435637 | Msa1320690:intron | 45.0% |
| ! | TGCCATTTCCAGAAGAGACT+GGG | - | chr8_4:25435623-25435642 | None:intergenic | 45.0% |
| ! | ATGCCATTTCCAGAAGAGAC+TGG | - | chr8_4:25435624-25435643 | None:intergenic | 45.0% |
| !! | TCCTAGTTCTAGTCGGTCTA+AGG | + | chr8_4:25435798-25435817 | Msa1320690:CDS | 45.0% |
| CATTGCTGGGTCAGAATACT+TGG | - | chr8_4:25435878-25435897 | None:intergenic | 45.0% | |
| CAAGTATTCTGACCCAGCAA+TGG | + | chr8_4:25435876-25435895 | Msa1320690:CDS | 45.0% | |
| ! | TAGCAGCTGATTCACGTGAA+GGG | - | chr8_4:25435915-25435934 | None:intergenic | 45.0% |
| ! | ATAGCAGCTGATTCACGTGA+AGG | - | chr8_4:25435916-25435935 | None:intergenic | 45.0% |
| CGTCTGTCACAGTCTTCAAT+TGG | + | chr8_4:25436003-25436022 | Msa1320690:CDS | 45.0% | |
| GTGACATGCTACCGAATGAA+GGG | - | chr8_4:25436032-25436051 | None:intergenic | 45.0% | |
| GTGATCCAACAACTGAGGAA+GGG | - | chr8_4:25436170-25436189 | None:intergenic | 45.0% | |
| TGTAGGTGATCCAACAACTG+AGG | - | chr8_4:25436175-25436194 | None:intergenic | 45.0% | |
| GCGATCCCAAATAAGACCAT+GGG | - | chr8_4:25436200-25436219 | None:intergenic | 45.0% | |
| ACGAAGAGCCTCATCTATCA+TGG | + | chr8_4:25436304-25436323 | Msa1320690:CDS | 45.0% | |
| CGAAGAGCCTCATCTATCAT+GGG | + | chr8_4:25436305-25436324 | Msa1320690:CDS | 45.0% | |
| ACTTGGACCCATGATAGATG+AGG | - | chr8_4:25436315-25436334 | None:intergenic | 45.0% | |
| AGGATTCCTTCAGTAGGACT+TGG | - | chr8_4:25436332-25436351 | None:intergenic | 45.0% | |
| TAGGTGAGGATTCCTTCAGT+AGG | - | chr8_4:25436338-25436357 | None:intergenic | 45.0% | |
| CGAAGCAAGTACTAGTAAGC+TGG | - | chr8_4:25434604-25434623 | None:intergenic | 45.0% | |
| GCTTCGTACAATGACTCTGA+AGG | + | chr8_4:25434618-25434637 | Msa1320690:CDS | 45.0% | |
| CAATTAACGAGGTGGGGATT+TGG | + | chr8_4:25434676-25434695 | Msa1320690:CDS | 45.0% | |
| CACCAGAAGCAACATAGTGA+AGG | - | chr8_4:25434857-25434876 | None:intergenic | 45.0% | |
| ! | CTTCACTATGTTGCTTCTGG+TGG | + | chr8_4:25434855-25434874 | Msa1320690:CDS | 45.0% |
| GGAACAACGATGACATCAAC+AGG | - | chr8_4:25434963-25434982 | None:intergenic | 45.0% | |
| TTCGGATCCACTACAAGAGA+AGG | - | chr8_4:25435152-25435171 | None:intergenic | 45.0% | |
| !! | CCAGGAAATGATGGATCTAC+TGG | - | chr8_4:25435197-25435216 | None:intergenic | 45.0% |
| CCAGTAGATCCATCATTTCC+TGG | + | chr8_4:25435194-25435213 | Msa1320690:intron | 45.0% | |
| CCTTTCCTAAATTCAGGGCA+AGG | - | chr8_4:25435307-25435326 | None:intergenic | 45.0% | |
| CCTTGCCCTGAATTTAGGAA+AGG | + | chr8_4:25435304-25435323 | Msa1320690:intron | 45.0% | |
| CAAGCCCCTTTCCTAAATTC+AGG | - | chr8_4:25435313-25435332 | None:intergenic | 45.0% | |
| GTCGTGTTCGATACTGATGT+GGG | - | chr8_4:25435390-25435409 | None:intergenic | 45.0% | |
| AGTCGTGTTCGATACTGATG+TGG | - | chr8_4:25435391-25435410 | None:intergenic | 45.0% | |
| TCGAACACGACTCTGTAAAG+AGG | + | chr8_4:25435399-25435418 | Msa1320690:CDS | 45.0% | |
| CGAACACGACTCTGTAAAGA+GGG | + | chr8_4:25435400-25435419 | Msa1320690:CDS | 45.0% | |
| GAACACGACTCTGTAAAGAG+GGG | + | chr8_4:25435401-25435420 | Msa1320690:CDS | 45.0% | |
| CTGCCTTCGTTAACTAGATC+TGG | + | chr8_4:25435481-25435500 | Msa1320690:CDS | 45.0% | |
| AAAGCAGAGGCAGATGAACA+TGG | - | chr8_4:25435517-25435536 | None:intergenic | 45.0% | |
| !! | TGCCTCTGCTTTTAATGCGA+TGG | + | chr8_4:25435525-25435544 | Msa1320690:CDS | 45.0% |
| GTCCATCGCATTAAAAGCAG+AGG | - | chr8_4:25435530-25435549 | None:intergenic | 45.0% | |
| TTATGCACGGAAGAGACTGA+CGG | - | chr8_4:25435589-25435608 | None:intergenic | 45.0% | |
| ! | TTCCCAGTCTCTTCTGGAAA+TGG | + | chr8_4:25435618-25435637 | Msa1320690:intron | 45.0% |
| ! | TGCCATTTCCAGAAGAGACT+GGG | - | chr8_4:25435623-25435642 | None:intergenic | 45.0% |
| ! | ATGCCATTTCCAGAAGAGAC+TGG | - | chr8_4:25435624-25435643 | None:intergenic | 45.0% |
| !! | TCCTAGTTCTAGTCGGTCTA+AGG | + | chr8_4:25435798-25435817 | Msa1320690:CDS | 45.0% |
| CATTGCTGGGTCAGAATACT+TGG | - | chr8_4:25435878-25435897 | None:intergenic | 45.0% | |
| CAAGTATTCTGACCCAGCAA+TGG | + | chr8_4:25435876-25435895 | Msa1320690:CDS | 45.0% | |
| ! | TAGCAGCTGATTCACGTGAA+GGG | - | chr8_4:25435915-25435934 | None:intergenic | 45.0% |
| ! | ATAGCAGCTGATTCACGTGA+AGG | - | chr8_4:25435916-25435935 | None:intergenic | 45.0% |
| CGTCTGTCACAGTCTTCAAT+TGG | + | chr8_4:25436003-25436022 | Msa1320690:CDS | 45.0% | |
| GTGACATGCTACCGAATGAA+GGG | - | chr8_4:25436032-25436051 | None:intergenic | 45.0% | |
| GTGATCCAACAACTGAGGAA+GGG | - | chr8_4:25436170-25436189 | None:intergenic | 45.0% | |
| TGTAGGTGATCCAACAACTG+AGG | - | chr8_4:25436175-25436194 | None:intergenic | 45.0% | |
| GCGATCCCAAATAAGACCAT+GGG | - | chr8_4:25436200-25436219 | None:intergenic | 45.0% | |
| ACGAAGAGCCTCATCTATCA+TGG | + | chr8_4:25436304-25436323 | Msa1320690:CDS | 45.0% | |
| CGAAGAGCCTCATCTATCAT+GGG | + | chr8_4:25436305-25436324 | Msa1320690:CDS | 45.0% | |
| ACTTGGACCCATGATAGATG+AGG | - | chr8_4:25436315-25436334 | None:intergenic | 45.0% | |
| AGGATTCCTTCAGTAGGACT+TGG | - | chr8_4:25436332-25436351 | None:intergenic | 45.0% | |
| TAGGTGAGGATTCCTTCAGT+AGG | - | chr8_4:25436338-25436357 | None:intergenic | 45.0% | |
| ! | GCCCTTCACTATGTTGCTTC+TGG | + | chr8_4:25434852-25434871 | Msa1320690:CDS | 50.0% |
| GGATCCACTACAAGAGAAGG+CGG | - | chr8_4:25435149-25435168 | None:intergenic | 50.0% | |
| TATGCAGCTTGTATGCACCC+AGG | + | chr8_4:25435232-25435251 | Msa1320690:intron | 50.0% | |
| GGCAAGGCACGCAACTATAA+TGG | - | chr8_4:25435291-25435310 | None:intergenic | 50.0% | |
| GAGGCAGATGAACATGGTGA+AGG | - | chr8_4:25435511-25435530 | None:intergenic | 50.0% | |
| TATGCACGGAAGAGACTGAC+GGG | - | chr8_4:25435588-25435607 | None:intergenic | 50.0% | |
| !! | AAGCCGGTCCTAGTTCTAGT+CGG | + | chr8_4:25435791-25435810 | Msa1320690:CDS | 50.0% |
| AGACCGACTAGAACTAGGAC+CGG | - | chr8_4:25435797-25435816 | None:intergenic | 50.0% | |
| GCCTTAGACCGACTAGAACT+AGG | - | chr8_4:25435802-25435821 | None:intergenic | 50.0% | |
| ! | AGCAGCTGATTCACGTGAAG+GGG | - | chr8_4:25435914-25435933 | None:intergenic | 50.0% |
| GGTGACATGCTACCGAATGA+AGG | - | chr8_4:25436033-25436052 | None:intergenic | 50.0% | |
| TGAGGGCTCATTGAGGAGAT+TGG | - | chr8_4:25436069-25436088 | None:intergenic | 50.0% | |
| GGTGATCCAACAACTGAGGA+AGG | - | chr8_4:25436171-25436190 | None:intergenic | 50.0% | |
| TTGGATCACCTACAGACCCA+TGG | + | chr8_4:25436181-25436200 | Msa1320690:CDS | 50.0% | |
| GGCGATCCCAAATAAGACCA+TGG | - | chr8_4:25436201-25436220 | None:intergenic | 50.0% | |
| ATGGGTCCAAGTCCTACTGA+AGG | + | chr8_4:25436323-25436342 | Msa1320690:CDS | 50.0% | |
| ! | GCCCTTCACTATGTTGCTTC+TGG | + | chr8_4:25434852-25434871 | Msa1320690:CDS | 50.0% |
| GGATCCACTACAAGAGAAGG+CGG | - | chr8_4:25435149-25435168 | None:intergenic | 50.0% | |
| TATGCAGCTTGTATGCACCC+AGG | + | chr8_4:25435232-25435251 | Msa1320690:intron | 50.0% | |
| GGCAAGGCACGCAACTATAA+TGG | - | chr8_4:25435291-25435310 | None:intergenic | 50.0% | |
| GAGGCAGATGAACATGGTGA+AGG | - | chr8_4:25435511-25435530 | None:intergenic | 50.0% | |
| TATGCACGGAAGAGACTGAC+GGG | - | chr8_4:25435588-25435607 | None:intergenic | 50.0% | |
| !! | AAGCCGGTCCTAGTTCTAGT+CGG | + | chr8_4:25435791-25435810 | Msa1320690:CDS | 50.0% |
| AGACCGACTAGAACTAGGAC+CGG | - | chr8_4:25435797-25435816 | None:intergenic | 50.0% | |
| GCCTTAGACCGACTAGAACT+AGG | - | chr8_4:25435802-25435821 | None:intergenic | 50.0% | |
| ! | AGCAGCTGATTCACGTGAAG+GGG | - | chr8_4:25435914-25435933 | None:intergenic | 50.0% |
| GGTGACATGCTACCGAATGA+AGG | - | chr8_4:25436033-25436052 | None:intergenic | 50.0% | |
| TGAGGGCTCATTGAGGAGAT+TGG | - | chr8_4:25436069-25436088 | None:intergenic | 50.0% | |
| GGTGATCCAACAACTGAGGA+AGG | - | chr8_4:25436171-25436190 | None:intergenic | 50.0% | |
| TTGGATCACCTACAGACCCA+TGG | + | chr8_4:25436181-25436200 | Msa1320690:CDS | 50.0% | |
| GGCGATCCCAAATAAGACCA+TGG | - | chr8_4:25436201-25436220 | None:intergenic | 50.0% | |
| ATGGGTCCAAGTCCTACTGA+AGG | + | chr8_4:25436323-25436342 | Msa1320690:CDS | 50.0% | |
| GGCGACACTGAAGGAGAGTA+TGG | - | chr8_4:25435128-25435147 | None:intergenic | 55.0% | |
| TGCACCCAGGAGAGAATGCT+CGG | + | chr8_4:25435245-25435264 | Msa1320690:intron | 55.0% | |
| TCCTCCGAGCATTCTCTCCT+GGG | - | chr8_4:25435252-25435271 | None:intergenic | 55.0% | |
| AGGAGAGAATGCTCGGAGGA+GGG | + | chr8_4:25435252-25435271 | Msa1320690:intron | 55.0% | |
| GCGTGCCTTGCCCTGAATTT+AGG | + | chr8_4:25435299-25435318 | Msa1320690:intron | 55.0% | |
| AGGAAAGGGGCTTGTAGGCA+TGG | + | chr8_4:25435319-25435338 | Msa1320690:intron | 55.0% | |
| ATGCACGGAAGAGACTGACG+GGG | - | chr8_4:25435587-25435606 | None:intergenic | 55.0% | |
| !! | TGCTGCTGTTTCCCGCAATG+AGG | - | chr8_4:25436105-25436124 | None:intergenic | 55.0% |
| GGCGACACTGAAGGAGAGTA+TGG | - | chr8_4:25435128-25435147 | None:intergenic | 55.0% | |
| TGCACCCAGGAGAGAATGCT+CGG | + | chr8_4:25435245-25435264 | Msa1320690:intron | 55.0% | |
| TCCTCCGAGCATTCTCTCCT+GGG | - | chr8_4:25435252-25435271 | None:intergenic | 55.0% | |
| AGGAGAGAATGCTCGGAGGA+GGG | + | chr8_4:25435252-25435271 | Msa1320690:intron | 55.0% | |
| GCGTGCCTTGCCCTGAATTT+AGG | + | chr8_4:25435299-25435318 | Msa1320690:intron | 55.0% | |
| AGGAAAGGGGCTTGTAGGCA+TGG | + | chr8_4:25435319-25435338 | Msa1320690:intron | 55.0% | |
| ATGCACGGAAGAGACTGACG+GGG | - | chr8_4:25435587-25435606 | None:intergenic | 55.0% | |
| !! | TGCTGCTGTTTCCCGCAATG+AGG | - | chr8_4:25436105-25436124 | None:intergenic | 55.0% |
| AGAGAAGGCGGCGACACTGA+AGG | - | chr8_4:25435137-25435156 | None:intergenic | 60.0% | |
| GTCGCCGCCTTCTCTTGTAG+TGG | + | chr8_4:25435142-25435161 | Msa1320690:CDS | 60.0% | |
| ACCCAGGAGAGAATGCTCGG+AGG | + | chr8_4:25435248-25435267 | Msa1320690:intron | 60.0% | |
| CTCCTCCGAGCATTCTCTCC+TGG | - | chr8_4:25435253-25435272 | None:intergenic | 60.0% | |
| CAGGAGAGAATGCTCGGAGG+AGG | + | chr8_4:25435251-25435270 | Msa1320690:intron | 60.0% | |
| AATGCTCGGAGGAGGGACCT+TGG | + | chr8_4:25435259-25435278 | Msa1320690:intron | 60.0% | |
| ATGCTCGGAGGAGGGACCTT+GGG | + | chr8_4:25435260-25435279 | Msa1320690:intron | 60.0% | |
| TGCACGGAAGAGACTGACGG+GGG | - | chr8_4:25435586-25435605 | None:intergenic | 60.0% | |
| AGAGAAGGCGGCGACACTGA+AGG | - | chr8_4:25435137-25435156 | None:intergenic | 60.0% | |
| GTCGCCGCCTTCTCTTGTAG+TGG | + | chr8_4:25435142-25435161 | Msa1320690:CDS | 60.0% | |
| ACCCAGGAGAGAATGCTCGG+AGG | + | chr8_4:25435248-25435267 | Msa1320690:intron | 60.0% | |
| CTCCTCCGAGCATTCTCTCC+TGG | - | chr8_4:25435253-25435272 | None:intergenic | 60.0% | |
| CAGGAGAGAATGCTCGGAGG+AGG | + | chr8_4:25435251-25435270 | Msa1320690:intron | 60.0% | |
| AATGCTCGGAGGAGGGACCT+TGG | + | chr8_4:25435259-25435278 | Msa1320690:intron | 60.0% | |
| ATGCTCGGAGGAGGGACCTT+GGG | + | chr8_4:25435260-25435279 | Msa1320690:intron | 60.0% | |
| TGCACGGAAGAGACTGACGG+GGG | - | chr8_4:25435586-25435605 | None:intergenic | 60.0% | |
| CTCGGAGGAGGGACCTTGGG+AGG | + | chr8_4:25435263-25435282 | Msa1320690:intron | 70.0% | |
| CTCGGAGGAGGGACCTTGGG+AGG | + | chr8_4:25435263-25435282 | Msa1320690:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 25434546 | 25436434 | 25434546 | ID=Msa1320690;Name=Msa1320690 |
| chr8_4 | mRNA | 25434546 | 25436434 | 25434546 | ID=Msa1320690-mRNA-1;Parent=Msa1320690;Name=Msa1320690-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|0.5|0.33|3|0|548 |
| chr8_4 | exon | 25434546 | 25435189 | 25434546 | ID=Msa1320690-mRNA-1:exon:8735;Parent=Msa1320690-mRNA-1 |
| chr8_4 | exon | 25435321 | 25435573 | 25435321 | ID=Msa1320690-mRNA-1:exon:8736;Parent=Msa1320690-mRNA-1 |
| chr8_4 | exon | 25435685 | 25436434 | 25435685 | ID=Msa1320690-mRNA-1:exon:8737;Parent=Msa1320690-mRNA-1 |
| chr8_4 | CDS | 25434546 | 25435189 | 25434546 | ID=Msa1320690-mRNA-1:cds;Parent=Msa1320690-mRNA-1 |
| chr8_4 | CDS | 25435321 | 25435573 | 25435321 | ID=Msa1320690-mRNA-1:cds;Parent=Msa1320690-mRNA-1 |
| chr8_4 | CDS | 25435685 | 25436434 | 25435685 | ID=Msa1320690-mRNA-1:cds;Parent=Msa1320690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
