Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321370 | sp|Q94CK9|LRP1_ARATH | 39.394 | 330 | 173 | 10 | 1 | 325 | 1 | 308 | 8.09e-56 | 187 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321370 | G7LG16 | 96.364 | 330 | 9 | 2 | 1 | 330 | 1 | 327 | 0.0 | 662 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1321370 | TF | SRS |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321370 | MtrunA17_Chr8g0353111 | 96.364 | 330 | 9 | 2 | 1 | 330 | 1 | 327 | 0.0 | 662 |
| Msa1321370 | MtrunA17_Chr3g0082511 | 61.095 | 347 | 98 | 16 | 1 | 329 | 1 | 328 | 9.78e-113 | 330 |
| Msa1321370 | MtrunA17_Chr5g0441921 | 43.173 | 271 | 130 | 7 | 42 | 301 | 34 | 291 | 1.04e-51 | 174 |
| Msa1321370 | MtrunA17_Chr8g0372461 | 35.945 | 217 | 109 | 3 | 70 | 285 | 63 | 250 | 1.86e-35 | 131 |
| Msa1321370 | MtrunA17_Chr5g0404781 | 45.062 | 162 | 80 | 4 | 127 | 287 | 100 | 253 | 8.51e-33 | 124 |
| Msa1321370 | MtrunA17_Chr1g0155791 | 42.857 | 161 | 79 | 3 | 127 | 287 | 122 | 269 | 6.57e-32 | 122 |
| Msa1321370 | MtrunA17_Chr3g0142171 | 38.710 | 186 | 82 | 6 | 127 | 307 | 86 | 244 | 2.43e-30 | 116 |
| Msa1321370 | MtrunA17_Chr4g0035591 | 35.632 | 174 | 74 | 3 | 116 | 289 | 9 | 144 | 5.09e-26 | 102 |
| Msa1321370 | MtrunA17_Chr2g0281741 | 62.857 | 35 | 13 | 0 | 127 | 161 | 150 | 184 | 1.05e-11 | 63.2 |
| Msa1321370 | MtrunA17_Chr0c01g0489181 | 54.348 | 46 | 21 | 0 | 116 | 161 | 56 | 101 | 1.36e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321370 | AT5G12330.1 | 39.394 | 330 | 173 | 10 | 1 | 325 | 1 | 308 | 8.23e-57 | 187 |
| Msa1321370 | AT5G12330.2 | 39.394 | 330 | 173 | 10 | 1 | 325 | 1 | 308 | 8.23e-57 | 187 |
| Msa1321370 | AT5G12330.4 | 39.394 | 330 | 173 | 10 | 1 | 325 | 88 | 395 | 2.95e-56 | 188 |
| Msa1321370 | AT3G54430.1 | 45.143 | 175 | 64 | 4 | 125 | 298 | 39 | 182 | 9.68e-39 | 135 |
| Msa1321370 | AT5G66350.3 | 40.556 | 180 | 89 | 1 | 113 | 292 | 106 | 267 | 3.60e-38 | 138 |
| Msa1321370 | AT5G66350.2 | 40.556 | 180 | 89 | 1 | 113 | 292 | 106 | 267 | 4.02e-38 | 138 |
| Msa1321370 | AT5G66350.1 | 40.556 | 180 | 89 | 1 | 113 | 292 | 106 | 267 | 4.55e-38 | 138 |
| Msa1321370 | AT1G75520.1 | 45.062 | 162 | 82 | 3 | 127 | 285 | 125 | 282 | 1.46e-37 | 137 |
| Msa1321370 | AT3G51060.1 | 46.250 | 160 | 62 | 5 | 127 | 283 | 144 | 282 | 1.25e-34 | 130 |
| Msa1321370 | AT1G19790.2 | 43.827 | 162 | 77 | 3 | 127 | 285 | 119 | 269 | 8.02e-34 | 127 |
| Msa1321370 | AT1G19790.1 | 43.827 | 162 | 77 | 3 | 127 | 285 | 119 | 269 | 8.02e-34 | 127 |
| Msa1321370 | AT4G36260.1 | 34.071 | 226 | 129 | 5 | 64 | 285 | 35 | 244 | 4.43e-30 | 117 |
| Msa1321370 | AT2G21400.4 | 37.356 | 174 | 73 | 4 | 113 | 286 | 2 | 139 | 8.30e-30 | 112 |
| Msa1321370 | AT2G21400.2 | 37.356 | 174 | 73 | 4 | 113 | 286 | 3 | 140 | 8.61e-30 | 112 |
| Msa1321370 | AT2G18120.1 | 37.423 | 163 | 76 | 2 | 127 | 289 | 72 | 208 | 1.94e-29 | 112 |
| Msa1321370 | AT2G18120.2 | 37.195 | 164 | 73 | 3 | 127 | 289 | 72 | 206 | 2.37e-29 | 112 |
| Msa1321370 | AT2G21400.3 | 35.057 | 174 | 62 | 4 | 113 | 286 | 3 | 125 | 9.19e-29 | 109 |
| Msa1321370 | AT2G21400.1 | 35.057 | 174 | 62 | 4 | 113 | 286 | 2 | 124 | 1.06e-28 | 109 |
| Msa1321370 | AT5G12330.3 | 38.073 | 218 | 113 | 8 | 1 | 213 | 1 | 201 | 2.95e-27 | 107 |
| Msa1321370 | AT5G33210.2 | 70.000 | 50 | 15 | 0 | 127 | 176 | 17 | 66 | 2.95e-20 | 84.7 |
| Msa1321370 | AT5G33210.1 | 70.000 | 50 | 15 | 0 | 127 | 176 | 52 | 101 | 2.95e-19 | 84.0 |
Find 79 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAATAGAATAGGGAGATTT+TGG | 0.131186 | 8_4:-26870529 | None:intergenic |
| TGCTTGTTGAGATTGCTTTA+AGG | 0.163317 | 8_4:+26871928 | Msa1321370:exon |
| TCATTGTTATTGTTATTGTT+AGG | 0.283403 | 8_4:-26870893 | None:intergenic |
| TGAGGAAAATGGTGAGTTTA+GGG | 0.296289 | 8_4:+26871060 | Msa1321370:CDS |
| AGTAGCATTGAGAATAGAAT+AGG | 0.306600 | 8_4:-26870539 | None:intergenic |
| GTGAGGAAAATGGTGAGTTT+AGG | 0.340272 | 8_4:+26871059 | Msa1321370:CDS |
| CATTGTTATTGTTATTGTTA+GGG | 0.340659 | 8_4:-26870892 | None:intergenic |
| CTATTAGAACCAAGTCTCTT+AGG | 0.357173 | 8_4:-26870721 | None:intergenic |
| GTAGCATTGAGAATAGAATA+GGG | 0.371162 | 8_4:-26870538 | None:intergenic |
| TGAAGATGAACTTGCTTACT+TGG | 0.373159 | 8_4:+26871724 | Msa1321370:CDS |
| AGTGATGGTGGTGCTTCTTC+TGG | 0.380721 | 8_4:+26871247 | Msa1321370:CDS |
| TGTTGCAAAATGAACATGTT+AGG | 0.386699 | 8_4:+26870698 | Msa1321370:exon |
| GATGAAGGTAAGGGAATGTT+TGG | 0.393591 | 8_4:-26870803 | None:intergenic |
| GAACTTAGATATCGATGTTA+CGG | 0.405757 | 8_4:+26874906 | Msa1321370:three_prime_UTR |
| TGCCAATAGCAGATACTCTA+TGG | 0.417109 | 8_4:-26871697 | None:intergenic |
| TTGGCTACTGTGAATATTAG+TGG | 0.419206 | 8_4:+26871743 | Msa1321370:CDS |
| AACTTAGATATCGATGTTAC+GGG | 0.420068 | 8_4:+26874907 | Msa1321370:three_prime_UTR |
| ATGTTCTTCCTCTGCAATTG+AGG | 0.420350 | 8_4:+26871880 | Msa1321370:CDS |
| ATGATGGGGTGTGAGGAAAA+TGG | 0.439286 | 8_4:+26871049 | Msa1321370:CDS |
| TGCCATAGAGTATCTGCTAT+TGG | 0.440334 | 8_4:+26871695 | Msa1321370:CDS |
| ATGTGTGTGTGATTGTGATT+TGG | 0.443717 | 8_4:-26870585 | None:intergenic |
| TGTTGGTTGTGAAGTGATGA+AGG | 0.446919 | 8_4:-26870752 | None:intergenic |
| TGGATTATGATCTGATGAAA+TGG | 0.452099 | 8_4:-26870783 | None:intergenic |
| CGGCTTCGATGAGGCGGGAC+CGG | 0.454062 | 8_4:+26871197 | Msa1321370:CDS |
| TATGATCTGATGAAATGGTT+TGG | 0.460879 | 8_4:-26870778 | None:intergenic |
| TTTAGGGTTTGTCAAGATTG+TGG | 0.461202 | 8_4:+26871076 | Msa1321370:CDS |
| GATGAGGGTGAGTGGTGGTT+AGG | 0.465386 | 8_4:-26870862 | None:intergenic |
| GAATTGCAACTTGGAAGTAA+TGG | 0.469782 | 8_4:+26871836 | Msa1321370:CDS |
| CAATCTCAACAAGCAGAAGC+AGG | 0.470698 | 8_4:-26871920 | None:intergenic |
| ATTGTAGCTATAAAAGATGT+AGG | 0.473288 | 8_4:+26871116 | Msa1321370:CDS |
| TAGTGCTGATGATGAAGGTA+AGG | 0.474808 | 8_4:-26870813 | None:intergenic |
| CGTGAAGAGTACGTGGATAC+CGG | 0.481380 | 8_4:+26871177 | Msa1321370:CDS |
| ATTGTAATGTAAAGAGAGGA+TGG | 0.481632 | 8_4:-26870637 | None:intergenic |
| TCATCATTACTTGTTGTGGT+TGG | 0.483361 | 8_4:-26870958 | None:intergenic |
| TCAGCACTAAGTGTTGGTCT+TGG | 0.487088 | 8_4:+26870827 | Msa1321370:CDS |
| AAAGGGTTTCTCTATGATCA+AGG | 0.488489 | 8_4:+26871776 | Msa1321370:CDS |
| CATGTTAGGCCTAAGAGACT+TGG | 0.493330 | 8_4:+26870712 | Msa1321370:CDS |
| TTCATCATCATTACTTGTTG+TGG | 0.498315 | 8_4:-26870962 | None:intergenic |
| ATTAGTGGCCATGTATTCAA+AGG | 0.512383 | 8_4:+26871758 | Msa1321370:CDS |
| GAAGCAGGGTAAGCACTAGT+TGG | 0.512667 | 8_4:-26871905 | None:intergenic |
| CAACTTGGAAGTAATGGAAG+TGG | 0.519956 | 8_4:+26871842 | Msa1321370:CDS |
| AGAGAAACCCTTTGAATACA+TGG | 0.531479 | 8_4:-26871766 | None:intergenic |
| TTAGTGGCCATGTATTCAAA+GGG | 0.533384 | 8_4:+26871759 | Msa1321370:CDS |
| AGGACTTGTTGTAAAGGTCG+TGG | 0.537935 | 8_4:+26871136 | Msa1321370:CDS |
| GGCAAAGTCTGCTTGAAACC+AGG | 0.539099 | 8_4:-26871641 | None:intergenic |
| CGGTCCCGCCTCATCGAAGC+CGG | 0.540948 | 8_4:-26871196 | None:intergenic |
| AGATGTAGGACTTGTTGTAA+AGG | 0.546985 | 8_4:+26871130 | Msa1321370:CDS |
| GCTTAAACTTCTTGTTCTAG+TGG | 0.556742 | 8_4:-26871350 | None:intergenic |
| CTATGGCACTTGAAAACAGC+AGG | 0.559201 | 8_4:-26871680 | None:intergenic |
| GGGTGAGTGGTGGTTAGGAG+TGG | 0.561227 | 8_4:-26870857 | None:intergenic |
| GCAGGCGCACGAACATAGCG+CGG | 0.562564 | 8_4:-26871662 | None:intergenic |
| GTGCTTCTTCTGGTACTAAG+AGG | 0.566999 | 8_4:+26871257 | Msa1321370:CDS |
| AGAGTATCTGCTATTGGCAA+TGG | 0.570693 | 8_4:+26871701 | Msa1321370:CDS |
| TACATAATAACAAGTACTGT+AGG | 0.571710 | 8_4:-26874831 | None:intergenic |
| ACACTTAGTGCTGATGATGA+AGG | 0.573973 | 8_4:-26870818 | None:intergenic |
| TGTGTTTCAGAATTGCAACT+TGG | 0.580875 | 8_4:+26871827 | Msa1321370:CDS |
| GAGGCGGGACCGGAGTATGA+TGG | 0.586244 | 8_4:+26871207 | Msa1321370:CDS |
| CGGAGTATGATGGTGGCTGA+AGG | 0.587151 | 8_4:+26871217 | Msa1321370:CDS |
| GCTGAAGGTGGTGACAGTGA+TGG | 0.591111 | 8_4:+26871232 | Msa1321370:CDS |
| GGTGAGTGGTGGTTAGGAGT+GGG | 0.591880 | 8_4:-26870856 | None:intergenic |
| GAATATTGTAATGTAAAGAG+AGG | 0.596204 | 8_4:-26870641 | None:intergenic |
| GATACCGGCTTCGATGAGGC+GGG | 0.596250 | 8_4:+26871192 | Msa1321370:CDS |
| GAAGGTGGTGACAGTGATGG+TGG | 0.597594 | 8_4:+26871235 | Msa1321370:CDS |
| TTGATGATGAGGGTGAGTGG+TGG | 0.600442 | 8_4:-26870867 | None:intergenic |
| GGATACCGGCTTCGATGAGG+CGG | 0.605870 | 8_4:+26871191 | Msa1321370:CDS |
| CTTGATGATGATGGGGTGTG+AGG | 0.610289 | 8_4:+26871042 | Msa1321370:CDS |
| TTGTAATGTAAAGAGAGGAT+GGG | 0.615772 | 8_4:-26870636 | None:intergenic |
| TCATCATCAGCACTAAGTGT+TGG | 0.620780 | 8_4:+26870821 | Msa1321370:CDS |
| AGTGCTGATGATGAAGGTAA+GGG | 0.621262 | 8_4:-26870812 | None:intergenic |
| GTTGTGGTTGGCACATCTTG+AGG | 0.623886 | 8_4:-26870946 | None:intergenic |
| AATCTCAACAAGCAGAAGCA+GGG | 0.625538 | 8_4:-26871919 | None:intergenic |
| GCGGGACCGGAGTATGATGG+TGG | 0.640592 | 8_4:+26871210 | Msa1321370:CDS |
| CTTCAGCCACCATCATACTC+CGG | 0.656848 | 8_4:-26871216 | None:intergenic |
| CGTGGATACCGGCTTCGATG+AGG | 0.658234 | 8_4:+26871188 | Msa1321370:CDS |
| AGTATGATGGTGGCTGAAGG+TGG | 0.658861 | 8_4:+26871220 | Msa1321370:CDS |
| ATAACTAGCTCTTGTCACCA+AGG | 0.669802 | 8_4:+26871379 | Msa1321370:CDS |
| AGTTGGAACCTCAATTGCAG+AGG | 0.675832 | 8_4:-26871888 | None:intergenic |
| AGTTGCAATTCTGAAACACA+AGG | 0.685469 | 8_4:-26871824 | None:intergenic |
| GTACTCACGTGAAGAGTACG+TGG | 0.688748 | 8_4:+26871170 | Msa1321370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATATGATTATTTAATCA+TGG | - | chr8_4:26871422-26871441 | None:intergenic | 10.0% |
| !! | ATATATTTACAAAGAAAAAT+AGG | + | chr8_4:26872151-26872170 | Msa1321370:intron | 10.0% |
| !! | ATAGTAAATAGTTAAATATA+CGG | + | chr8_4:26872793-26872812 | Msa1321370:intron | 10.0% |
| !! | TATATTAAAAATTATGTGAA+TGG | - | chr8_4:26873123-26873142 | None:intergenic | 10.0% |
| !!! | TGTTTACAAAACTTTTTTTA+TGG | + | chr8_4:26871447-26871466 | Msa1321370:intron | 15.0% |
| !!! | GAAATTGTATTCTTTTATTA+AGG | + | chr8_4:26872083-26872102 | Msa1321370:intron | 15.0% |
| !!! | TATTTAAAAGTGTCTAATTA+AGG | + | chr8_4:26872877-26872896 | Msa1321370:intron | 15.0% |
| !! | AAGAAAAGATGTAAAAATTT+GGG | - | chr8_4:26873588-26873607 | None:intergenic | 15.0% |
| !! | AAAGAAAAGATGTAAAAATT+TGG | - | chr8_4:26873589-26873608 | None:intergenic | 15.0% |
| !! | ATTAGAAAAAAGGAAAAATA+CGG | + | chr8_4:26873706-26873725 | Msa1321370:intron | 15.0% |
| !!! | TTTTTTTTTATGGATAACAA+AGG | - | chr8_4:26873777-26873796 | None:intergenic | 15.0% |
| !!! | ATAACAAAGGTTTTTTTTTA+TGG | - | chr8_4:26873787-26873806 | None:intergenic | 15.0% |
| !! | GAATAATGATAATATAACAA+AGG | - | chr8_4:26873800-26873819 | None:intergenic | 15.0% |
| !! | TAAATTTAATGAAATTGTCT+TGG | - | chr8_4:26873956-26873975 | None:intergenic | 15.0% |
| !! | ATTAGATTAAATAAGGAATA+TGG | - | chr8_4:26874277-26874296 | None:intergenic | 15.0% |
| !!! | ATATTCCTTATTTAATCTAA+TGG | + | chr8_4:26874276-26874295 | Msa1321370:intron | 15.0% |
| !!! | TTTTACCATTAGATTAAATA+AGG | - | chr8_4:26874284-26874303 | None:intergenic | 15.0% |
| !!! | TTATGTATTGTTTTCTTTAG+GGG | - | chr8_4:26870565-26870584 | None:intergenic | 20.0% |
| !!! | GTTATGTATTGTTTTCTTTA+GGG | - | chr8_4:26870566-26870585 | None:intergenic | 20.0% |
| !!! | GTTGGTTTTGTTTATTTATT+GGG | - | chr8_4:26870668-26870687 | None:intergenic | 20.0% |
| !!! | TGTTGGTTTTGTTTATTTAT+TGG | - | chr8_4:26870669-26870688 | None:intergenic | 20.0% |
| !!! | CATTGTTATTGTTATTGTTA+GGG | - | chr8_4:26870895-26870914 | None:intergenic | 20.0% |
| !!! | TCATTGTTATTGTTATTGTT+AGG | - | chr8_4:26870896-26870915 | None:intergenic | 20.0% |
| !! | GTATTGTTATAATGATAAGT+TGG | + | chr8_4:26871990-26872009 | Msa1321370:intron | 20.0% |
| !! | ATAGAGAGAAAATAAAATCA+AGG | + | chr8_4:26872196-26872215 | Msa1321370:intron | 20.0% |
| !! | ATATTGAAATCATTTCCTAA+TGG | - | chr8_4:26872292-26872311 | None:intergenic | 20.0% |
| !! | GAAGTCAATAACTAATTTAA+TGG | - | chr8_4:26872627-26872646 | None:intergenic | 20.0% |
| !! | TATTGAGCTATAGAAATTAA+TGG | - | chr8_4:26873334-26873353 | None:intergenic | 20.0% |
| !! | AGAAAAGATGTAAAAATTTG+GGG | - | chr8_4:26873587-26873606 | None:intergenic | 20.0% |
| !! | GTTACTGATAATTAGAAAAA+AGG | + | chr8_4:26873696-26873715 | Msa1321370:intron | 20.0% |
| !! | TTAGAAAAAAGGAAAAATAC+GGG | + | chr8_4:26873707-26873726 | Msa1321370:intron | 20.0% |
| !! | ACAATATAATCAAAGAGAAA+AGG | + | chr8_4:26873830-26873849 | Msa1321370:intron | 20.0% |
| !! | GCTAAAGAATTATATGAAAT+AGG | + | chr8_4:26874033-26874052 | Msa1321370:intron | 20.0% |
| !!! | CATTATACATTTTACCAAAT+CGG | + | chr8_4:26874385-26874404 | Msa1321370:intron | 20.0% |
| !! | TAGCTACAATAATATGTAAT+GGG | - | chr8_4:26874642-26874661 | None:intergenic | 20.0% |
| !! | CAATTTATATAGATTTGTGT+AGG | + | chr8_4:26874718-26874737 | Msa1321370:intron | 20.0% |
| !! | GGTTATGTATTGTTTTCTTT+AGG | - | chr8_4:26870567-26870586 | None:intergenic | 25.0% |
| ! | GAATATTGTAATGTAAAGAG+AGG | - | chr8_4:26870644-26870663 | None:intergenic | 25.0% |
| !! | TTCATCAAGACTCAAATTTT+TGG | + | chr8_4:26870921-26870940 | Msa1321370:CDS | 25.0% |
| !!! | AAACAAAAACTTGATGATGA+TGG | + | chr8_4:26871033-26871052 | Msa1321370:CDS | 25.0% |
| !!! | AACAAAAACTTGATGATGAT+GGG | + | chr8_4:26871034-26871053 | Msa1321370:CDS | 25.0% |
| ! | ATTGTAGCTATAAAAGATGT+AGG | + | chr8_4:26871116-26871135 | Msa1321370:CDS | 25.0% |
| ! | ACAATACAAGTACATCAAAA+GGG | - | chr8_4:26871977-26871996 | None:intergenic | 25.0% |
| ! | AACAATACAAGTACATCAAA+AGG | - | chr8_4:26871978-26871997 | None:intergenic | 25.0% |
| !! | TACCTTATGATTTTACCATT+AGG | + | chr8_4:26872274-26872293 | Msa1321370:intron | 25.0% |
| ! | TTCCTAATGGTAAAATCATA+AGG | - | chr8_4:26872279-26872298 | None:intergenic | 25.0% |
| ! | ACCTAAGGAATTGAAAAATT+AGG | - | chr8_4:26872584-26872603 | None:intergenic | 25.0% |
| ! | TCAATAAACTAATCAACCTA+AGG | - | chr8_4:26872599-26872618 | None:intergenic | 25.0% |
| ! | ACAGTAGGTTGTTAAAATAT+AGG | + | chr8_4:26872760-26872779 | Msa1321370:intron | 25.0% |
| ! | CAGTAGGTTGTTAAAATATA+GGG | + | chr8_4:26872761-26872780 | Msa1321370:intron | 25.0% |
| ! | AGTAGGTTGTTAAAATATAG+GGG | + | chr8_4:26872762-26872781 | Msa1321370:intron | 25.0% |
| !!! | TTAAAAGTGTCTAATTAAGG+CGG | + | chr8_4:26872880-26872899 | Msa1321370:intron | 25.0% |
| ! | TGTATACTTGTGTCAATTTA+TGG | + | chr8_4:26872933-26872952 | Msa1321370:intron | 25.0% |
| ! | GTAACATAGAAAACTTACTT+TGG | - | chr8_4:26872980-26872999 | None:intergenic | 25.0% |
| !! | TTCTATGTTACCAAATTTTG+TGG | + | chr8_4:26872989-26873008 | Msa1321370:intron | 25.0% |
| ! | TTCAAAACAACCACAAAATT+TGG | - | chr8_4:26873002-26873021 | None:intergenic | 25.0% |
| !!! | ATGTTTTGATTGATGAAGTT+TGG | + | chr8_4:26873164-26873183 | Msa1321370:intron | 25.0% |
| ! | AAAATAAATGTGACGAAATG+AGG | - | chr8_4:26873212-26873231 | None:intergenic | 25.0% |
| ! | TAAAAAAATCAACTTTCCCA+TGG | - | chr8_4:26873427-26873446 | None:intergenic | 25.0% |
| !! | ATGTTTCTTGTTTGATCTAA+TGG | - | chr8_4:26873450-26873469 | None:intergenic | 25.0% |
| ! | ATTAGATCAAACAAGAAACA+TGG | + | chr8_4:26873449-26873468 | Msa1321370:intron | 25.0% |
| ! | GAAAAGATGTAAAAATTTGG+GGG | - | chr8_4:26873586-26873605 | None:intergenic | 25.0% |
| !!! | TAACCAAATCATTTTTCTGA+GGG | - | chr8_4:26873680-26873699 | None:intergenic | 25.0% |
| !! | TTTTTATGGATAACAAAGGT+TGG | - | chr8_4:26873773-26873792 | None:intergenic | 25.0% |
| ! | TGCTATTGATGTTTATTTGT+AGG | + | chr8_4:26873977-26873996 | Msa1321370:intron | 25.0% |
| ! | TATGAACGTTGAATCAAAAT+TGG | + | chr8_4:26874469-26874488 | Msa1321370:intron | 25.0% |
| ! | GTAGCTACAATAATATGTAA+TGG | - | chr8_4:26874643-26874662 | None:intergenic | 25.0% |
| ! | AAGTTGTTACCTAAACATTA+GGG | - | chr8_4:26874665-26874684 | None:intergenic | 25.0% |
| ! | AAAGTTGTTACCTAAACATT+AGG | - | chr8_4:26874666-26874685 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCTTTCTGATGAC+AGG | + | chr8_4:26874779-26874798 | Msa1321370:intron | 25.0% |
| !! | TACATAATAACAAGTACTGT+AGG | - | chr8_4:26874834-26874853 | None:intergenic | 25.0% |
| ! | AGAATAGAATAGGGAGATTT+TGG | - | chr8_4:26870532-26870551 | None:intergenic | 30.0% |
| ! | GTAGCATTGAGAATAGAATA+GGG | - | chr8_4:26870541-26870560 | None:intergenic | 30.0% |
| ! | AGTAGCATTGAGAATAGAAT+AGG | - | chr8_4:26870542-26870561 | None:intergenic | 30.0% |
| TTGTAATGTAAAGAGAGGAT+GGG | - | chr8_4:26870639-26870658 | None:intergenic | 30.0% | |
| ATTGTAATGTAAAGAGAGGA+TGG | - | chr8_4:26870640-26870659 | None:intergenic | 30.0% | |
| ! | TTCATTTTGCAACAAGGTTT+TGG | - | chr8_4:26870692-26870711 | None:intergenic | 30.0% |
| ! | AACATGTTCATTTTGCAACA+AGG | - | chr8_4:26870698-26870717 | None:intergenic | 30.0% |
| TGTTGCAAAATGAACATGTT+AGG | + | chr8_4:26870698-26870717 | Msa1321370:exon | 30.0% | |
| !!! | ATGAAATGGTTTGGTTTTGT+TGG | - | chr8_4:26870772-26870791 | None:intergenic | 30.0% |
| TATGATCTGATGAAATGGTT+TGG | - | chr8_4:26870781-26870800 | None:intergenic | 30.0% | |
| TGGATTATGATCTGATGAAA+TGG | - | chr8_4:26870786-26870805 | None:intergenic | 30.0% | |
| ! | TTCATCATCATTACTTGTTG+TGG | - | chr8_4:26870965-26870984 | None:intergenic | 30.0% |
| !! | ACAAAAACTTGATGATGATG+GGG | + | chr8_4:26871035-26871054 | Msa1321370:CDS | 30.0% |
| !! | AACAAAAAGTGAAAGTACCT+TGG | - | chr8_4:26871399-26871418 | None:intergenic | 30.0% |
| TGAATCCAAAAAATGCAACA+AGG | - | chr8_4:26872338-26872357 | None:intergenic | 30.0% | |
| ATGTCACCTTCAATCAAAAA+AGG | + | chr8_4:26872441-26872460 | Msa1321370:intron | 30.0% | |
| !!! | AGTTGTCCTTTTTTGATTGA+AGG | - | chr8_4:26872450-26872469 | None:intergenic | 30.0% |
| !! | GCCTAATTTTTCAATTCCTT+AGG | + | chr8_4:26872580-26872599 | Msa1321370:intron | 30.0% |
| AGTCATTGAAAGAATATGCT+AGG | + | chr8_4:26872694-26872713 | Msa1321370:intron | 30.0% | |
| ACTAATTTGATGCTAGTAAG+TGG | + | chr8_4:26872718-26872737 | Msa1321370:intron | 30.0% | |
| ! | ATAGAAAACTTACTTTGGAG+GGG | - | chr8_4:26872975-26872994 | None:intergenic | 30.0% |
| CATAGAAAACTTACTTTGGA+GGG | - | chr8_4:26872976-26872995 | None:intergenic | 30.0% | |
| ACATAGAAAACTTACTTTGG+AGG | - | chr8_4:26872977-26872996 | None:intergenic | 30.0% | |
| TGAAAATGTCCTAGTTTCTA+AGG | - | chr8_4:26873270-26873289 | None:intergenic | 30.0% | |
| ATAACTAGCAACATGACTTT+AGG | + | chr8_4:26873354-26873373 | Msa1321370:intron | 30.0% | |
| ! | TTTTTATATTCAACCATCGC+CGG | + | chr8_4:26873606-26873625 | Msa1321370:intron | 30.0% |
| !! | GTAACCAAATCATTTTTCTG+AGG | - | chr8_4:26873681-26873700 | None:intergenic | 30.0% |
| TAATCTTAACCAATCACCAA+TGG | - | chr8_4:26873861-26873880 | None:intergenic | 30.0% | |
| TAATGAAATTGTCTTGGATC+TGG | - | chr8_4:26873950-26873969 | None:intergenic | 30.0% | |
| AATGATGGTAGAACATAGTA+TGG | + | chr8_4:26874217-26874236 | Msa1321370:intron | 30.0% | |
| ATGATGGTAGAACATAGTAT+GGG | + | chr8_4:26874218-26874237 | Msa1321370:intron | 30.0% | |
| GTAAAAAATCAACTTTCCCA+TGG | + | chr8_4:26874298-26874317 | Msa1321370:intron | 30.0% | |
| TTTGACATATTCACTCATTC+AGG | + | chr8_4:26874434-26874453 | Msa1321370:intron | 30.0% | |
| !! | AATATGTAATGGGCAAAATG+TGG | - | chr8_4:26874632-26874651 | None:intergenic | 30.0% |
| GAACTTAGATATCGATGTTA+CGG | + | chr8_4:26874906-26874925 | Msa1321370:three_prime_UTR | 30.0% | |
| AACTTAGATATCGATGTTAC+GGG | + | chr8_4:26874907-26874926 | Msa1321370:three_prime_UTR | 30.0% | |
| ATGTGTGTGTGATTGTGATT+TGG | - | chr8_4:26870588-26870607 | None:intergenic | 35.0% | |
| CTATTAGAACCAAGTCTCTT+AGG | - | chr8_4:26870724-26870743 | None:intergenic | 35.0% | |
| !!! | TGTTAGGGTTTTGATGATGA+GGG | - | chr8_4:26870880-26870899 | None:intergenic | 35.0% |
| !!! | TTGTTAGGGTTTTGATGATG+AGG | - | chr8_4:26870881-26870900 | None:intergenic | 35.0% |
| !! | TCATCATTACTTGTTGTGGT+TGG | - | chr8_4:26870961-26870980 | None:intergenic | 35.0% |
| TGAGGAAAATGGTGAGTTTA+GGG | + | chr8_4:26871060-26871079 | Msa1321370:CDS | 35.0% | |
| ! | TTTAGGGTTTGTCAAGATTG+TGG | + | chr8_4:26871076-26871095 | Msa1321370:CDS | 35.0% |
| !! | AGATGTAGGACTTGTTGTAA+AGG | + | chr8_4:26871130-26871149 | Msa1321370:CDS | 35.0% |
| GCTTAAACTTCTTGTTCTAG+TGG | - | chr8_4:26871353-26871372 | None:intergenic | 35.0% | |
| ! | TGAAGATGAACTTGCTTACT+TGG | + | chr8_4:26871724-26871743 | Msa1321370:CDS | 35.0% |
| TTGGCTACTGTGAATATTAG+TGG | + | chr8_4:26871743-26871762 | Msa1321370:CDS | 35.0% | |
| ATTAGTGGCCATGTATTCAA+AGG | + | chr8_4:26871758-26871777 | Msa1321370:CDS | 35.0% | |
| TTAGTGGCCATGTATTCAAA+GGG | + | chr8_4:26871759-26871778 | Msa1321370:CDS | 35.0% | |
| AGAGAAACCCTTTGAATACA+TGG | - | chr8_4:26871769-26871788 | None:intergenic | 35.0% | |
| AAAGGGTTTCTCTATGATCA+AGG | + | chr8_4:26871776-26871795 | Msa1321370:CDS | 35.0% | |
| !! | AGTTGCAATTCTGAAACACA+AGG | - | chr8_4:26871827-26871846 | None:intergenic | 35.0% |
| TGTGTTTCAGAATTGCAACT+TGG | + | chr8_4:26871827-26871846 | Msa1321370:CDS | 35.0% | |
| GAATTGCAACTTGGAAGTAA+TGG | + | chr8_4:26871836-26871855 | Msa1321370:CDS | 35.0% | |
| ! | TGCTTGTTGAGATTGCTTTA+AGG | + | chr8_4:26871928-26871947 | Msa1321370:exon | 35.0% |
| ACCATTTGTACGACAATTTC+TGG | + | chr8_4:26872121-26872140 | Msa1321370:intron | 35.0% | |
| CCATTTGTACGACAATTTCT+GGG | + | chr8_4:26872122-26872141 | Msa1321370:intron | 35.0% | |
| !!! | TGACACCTTGTTGCATTTTT+TGG | + | chr8_4:26872330-26872349 | Msa1321370:intron | 35.0% |
| AATCTGATTCAGCAAGAGTT+CGG | + | chr8_4:26872556-26872575 | Msa1321370:intron | 35.0% | |
| TGCTAGTAAGTGGATAAACT+TGG | + | chr8_4:26872728-26872747 | Msa1321370:intron | 35.0% | |
| GCTAGTAAGTGGATAAACTT+GGG | + | chr8_4:26872729-26872748 | Msa1321370:intron | 35.0% | |
| ACTTGGGTCAAATTAACAGT+AGG | + | chr8_4:26872745-26872764 | Msa1321370:intron | 35.0% | |
| ! | TAGAAAACTTACTTTGGAGG+GGG | - | chr8_4:26872974-26872993 | None:intergenic | 35.0% |
| !!! | AGTATAGTTTTTTCCCACCA+TGG | + | chr8_4:26873407-26873426 | Msa1321370:intron | 35.0% |
| !!! | GTATAGTTTTTTCCCACCAT+GGG | + | chr8_4:26873408-26873427 | Msa1321370:intron | 35.0% |
| AAAATCAACTTTCCCATGGT+GGG | - | chr8_4:26874302-26874321 | None:intergenic | 35.0% | |
| AAAAATCAACTTTCCCATGG+TGG | - | chr8_4:26874301-26874320 | None:intergenic | 35.0% | |
| TTATCTTAGTTGCTCTGTAC+TGG | + | chr8_4:26873474-26873493 | Msa1321370:intron | 35.0% | |
| AAATTTGGGGGAAATGATGA+AGG | - | chr8_4:26873574-26873593 | None:intergenic | 35.0% | |
| ACTCCCTCAGAAAAATGATT+TGG | + | chr8_4:26873674-26873693 | Msa1321370:intron | 35.0% | |
| ! | TATGGATAACAAAGGTTGGT+AGG | - | chr8_4:26873769-26873788 | None:intergenic | 35.0% |
| !! | AAGAGAAAAGGTACTTCCAT+TGG | + | chr8_4:26873842-26873861 | Msa1321370:intron | 35.0% |
| AATTCCAATTGTGTCACCAA+GGG | - | chr8_4:26874073-26874092 | None:intergenic | 35.0% | |
| AAATTCCAATTGTGTCACCA+AGG | - | chr8_4:26874074-26874093 | None:intergenic | 35.0% | |
| ! | TTGGTGACACAATTGGAATT+TGG | + | chr8_4:26874073-26874092 | Msa1321370:intron | 35.0% |
| AACAGAGAAAACATGTTACC+TGG | - | chr8_4:26874103-26874122 | None:intergenic | 35.0% | |
| ! | AGGTAACATGTTTTCTCTGT+TGG | + | chr8_4:26874102-26874121 | Msa1321370:intron | 35.0% |
| TGAATGGAGAAGAAAAGAGT+TGG | + | chr8_4:26874132-26874151 | Msa1321370:intron | 35.0% | |
| GAATGGAGAAGAAAAGAGTT+GGG | + | chr8_4:26874133-26874152 | Msa1321370:intron | 35.0% | |
| AATGGAGAAGAAAAGAGTTG+GGG | + | chr8_4:26874134-26874153 | Msa1321370:intron | 35.0% | |
| ATGAAGGAGAGAGAAAATGA+TGG | + | chr8_4:26874202-26874221 | Msa1321370:intron | 35.0% | |
| AAAAATCAACTTTCCCATGG+TGG | + | chr8_4:26874301-26874320 | Msa1321370:intron | 35.0% | |
| AAAATCAACTTTCCCATGGT+GGG | + | chr8_4:26874302-26874321 | Msa1321370:intron | 35.0% | |
| ! | ATTTTACCAAATCGGATCGT+TGG | + | chr8_4:26874393-26874412 | Msa1321370:intron | 35.0% |
| ACATATTCACTCATTCAGGA+CGG | + | chr8_4:26874438-26874457 | Msa1321370:intron | 35.0% | |
| TCCAAGAACCATATTTGTCT+TGG | + | chr8_4:26874572-26874591 | Msa1321370:intron | 35.0% | |
| TCCAAGACAAATATGGTTCT+TGG | - | chr8_4:26874576-26874595 | None:intergenic | 35.0% | |
| AGACTCATCCAAGACAAATA+TGG | - | chr8_4:26874583-26874602 | None:intergenic | 35.0% | |
| GGATGAGTCTAAAAATTGAC+CGG | + | chr8_4:26874593-26874612 | Msa1321370:intron | 35.0% | |
| TTGTAGCTACCCTAATGTTT+AGG | + | chr8_4:26874653-26874672 | Msa1321370:intron | 35.0% | |
| ! | TTTTTCTTTCTGATGACAGG+TGG | + | chr8_4:26874782-26874801 | Msa1321370:intron | 35.0% |
| !!! | GTTTTTTCTCTGGTTATGCA+TGG | + | chr8_4:26874804-26874823 | Msa1321370:three_prime_UTR | 35.0% |
| !!! | AGGGAGATTTTGGAACAGAA+AGG | - | chr8_4:26870522-26870541 | None:intergenic | 40.0% |
| !! | TTGCAACAAGGTTTTGGTGT+TGG | - | chr8_4:26870686-26870705 | None:intergenic | 40.0% |
| ! | TGTTGGTTGTGAAGTGATGA+AGG | - | chr8_4:26870755-26870774 | None:intergenic | 40.0% |
| GATGAAGGTAAGGGAATGTT+TGG | - | chr8_4:26870806-26870825 | None:intergenic | 40.0% | |
| !! | AGTGCTGATGATGAAGGTAA+GGG | - | chr8_4:26870815-26870834 | None:intergenic | 40.0% |
| !! | TAGTGCTGATGATGAAGGTA+AGG | - | chr8_4:26870816-26870835 | None:intergenic | 40.0% |
| !! | ACACTTAGTGCTGATGATGA+AGG | - | chr8_4:26870821-26870840 | None:intergenic | 40.0% |
| TCATCATCAGCACTAAGTGT+TGG | + | chr8_4:26870821-26870840 | Msa1321370:CDS | 40.0% | |
| GTGAGGAAAATGGTGAGTTT+AGG | + | chr8_4:26871059-26871078 | Msa1321370:CDS | 40.0% | |
| ! | ATAACTAGCTCTTGTCACCA+AGG | + | chr8_4:26871379-26871398 | Msa1321370:CDS | 40.0% |
| CTACCTCTCTGATTAGTACA+GGG | - | chr8_4:26871558-26871577 | None:intergenic | 40.0% | |
| TCTACCTCTCTGATTAGTAC+AGG | - | chr8_4:26871559-26871578 | None:intergenic | 40.0% | |
| ! | TGTTTCTGAATTGCAGATCC+TGG | + | chr8_4:26871623-26871642 | Msa1321370:intron | 40.0% |
| ! | TGCCATAGAGTATCTGCTAT+TGG | + | chr8_4:26871695-26871714 | Msa1321370:CDS | 40.0% |
| TGCCAATAGCAGATACTCTA+TGG | - | chr8_4:26871700-26871719 | None:intergenic | 40.0% | |
| ! | AGAGTATCTGCTATTGGCAA+TGG | + | chr8_4:26871701-26871720 | Msa1321370:CDS | 40.0% |
| ! | CAACTTGGAAGTAATGGAAG+TGG | + | chr8_4:26871842-26871861 | Msa1321370:CDS | 40.0% |
| ATGTTCTTCCTCTGCAATTG+AGG | + | chr8_4:26871880-26871899 | Msa1321370:CDS | 40.0% | |
| AATCTCAACAAGCAGAAGCA+GGG | - | chr8_4:26871922-26871941 | None:intergenic | 40.0% | |
| CCCAGAAATTGTCGTACAAA+TGG | - | chr8_4:26872125-26872144 | None:intergenic | 40.0% | |
| TAAGGCGGAGACTAATTTAG+TGG | + | chr8_4:26872895-26872914 | Msa1321370:intron | 40.0% | |
| ! | CCTAGTTTCTAAGGAAAGAG+TGG | - | chr8_4:26873261-26873280 | None:intergenic | 40.0% |
| CCACTCTTTCCTTAGAAACT+AGG | + | chr8_4:26873258-26873277 | Msa1321370:intron | 40.0% | |
| ATGACTTTAGGTAACTGCTG+AGG | + | chr8_4:26873366-26873385 | Msa1321370:intron | 40.0% | |
| !! | AATGATGGTGGAAGAAAGTG+TGG | - | chr8_4:26873508-26873527 | None:intergenic | 40.0% |
| ATGGAGGAGAGAGAAAATGA+TGG | - | chr8_4:26873523-26873542 | None:intergenic | 40.0% | |
| ! | AAACTCACCGTTTTCTTTGC+CGG | - | chr8_4:26873628-26873647 | None:intergenic | 40.0% |
| ! | AAGGTACTTCCATTGGTGAT+TGG | + | chr8_4:26873849-26873868 | Msa1321370:intron | 40.0% |
| TCTTGCAACAACTTCTTCCA+TGG | + | chr8_4:26873903-26873922 | Msa1321370:intron | 40.0% | |
| !! | GGTTGCTTTGAAATTTCCCT+TGG | + | chr8_4:26874054-26874073 | Msa1321370:intron | 40.0% |
| ! | ATTTCCCTTGGTGACACAAT+TGG | + | chr8_4:26874066-26874085 | Msa1321370:intron | 40.0% |
| ! | CATGTTTTCTCTGTTGGCAA+TGG | + | chr8_4:26874108-26874127 | Msa1321370:intron | 40.0% |
| AGTTGGGGAAATGATGAAGT+TGG | + | chr8_4:26874149-26874168 | Msa1321370:intron | 40.0% | |
| !! | AAATGATGAAGTTGGTGGTC+CGG | + | chr8_4:26874157-26874176 | Msa1321370:intron | 40.0% |
| !!! | GTGAAGTTTTTTCCCACCAT+GGG | - | chr8_4:26874317-26874336 | None:intergenic | 40.0% |
| !!! | AGTGAAGTTTTTTCCCACCA+TGG | - | chr8_4:26874318-26874337 | None:intergenic | 40.0% |
| AAAGAAAGAGCTTCAGCAGT+TGG | - | chr8_4:26874359-26874378 | None:intergenic | 40.0% | |
| GAGTCTAAAAATTGACCGGA+TGG | + | chr8_4:26874597-26874616 | Msa1321370:intron | 40.0% | |
| AAATTGACCGGATGGAATCA+TGG | + | chr8_4:26874605-26874624 | Msa1321370:intron | 40.0% | |
| !!! | ATGACAGGTGGTTTTTTCTC+TGG | + | chr8_4:26874794-26874813 | Msa1321370:intron | 40.0% |
| CATGTTAGGCCTAAGAGACT+TGG | + | chr8_4:26870712-26870731 | Msa1321370:CDS | 45.0% | |
| !! | TCAGCACTAAGTGTTGGTCT+TGG | + | chr8_4:26870827-26870846 | Msa1321370:CDS | 45.0% |
| !!! | GTTTTGATGATGAGGGTGAG+TGG | - | chr8_4:26870873-26870892 | None:intergenic | 45.0% |
| ! | ATGATGGGGTGTGAGGAAAA+TGG | + | chr8_4:26871049-26871068 | Msa1321370:CDS | 45.0% |
| !! | AGGACTTGTTGTAAAGGTCG+TGG | + | chr8_4:26871136-26871155 | Msa1321370:CDS | 45.0% |
| GTGCTTCTTCTGGTACTAAG+AGG | + | chr8_4:26871257-26871276 | Msa1321370:CDS | 45.0% | |
| ATCAGAGAGGTAGACGCAAT+TGG | - | chr8_4:26871565-26871584 | None:intergenic | 45.0% | |
| ATCAGAGAGGTAGACGCAAT+TGG | + | chr8_4:26871565-26871584 | Msa1321370:intron | 45.0% | |
| CTATGGCACTTGAAAACAGC+AGG | - | chr8_4:26871683-26871702 | None:intergenic | 45.0% | |
| AGTTGGAACCTCAATTGCAG+AGG | - | chr8_4:26871891-26871910 | None:intergenic | 45.0% | |
| CAATCTCAACAAGCAGAAGC+AGG | - | chr8_4:26871923-26871942 | None:intergenic | 45.0% | |
| CTAACACAGTCGATGAAGTG+TGG | - | chr8_4:26872529-26872548 | None:intergenic | 45.0% | |
| ! | CACACTTCATCGACTGTGTT+AGG | + | chr8_4:26872527-26872546 | Msa1321370:intron | 45.0% |
| TGCTTCTCCTCATCAAGCTT+TGG | + | chr8_4:26873234-26873253 | Msa1321370:intron | 45.0% | |
| ACTTTAGGTAACTGCTGAGG+TGG | + | chr8_4:26873369-26873388 | Msa1321370:intron | 45.0% | |
| GAGGAGAGAGAAAATGATGG+TGG | - | chr8_4:26873520-26873539 | None:intergenic | 45.0% | |
| TTTGGGGGAAATGATGAAGG+TGG | - | chr8_4:26873571-26873590 | None:intergenic | 45.0% | |
| CAATTGGAATTTGGCACACC+AGG | + | chr8_4:26874082-26874101 | Msa1321370:intron | 45.0% | |
| CTCTGTTGGCAATGGTTGAA+TGG | + | chr8_4:26874116-26874135 | Msa1321370:intron | 45.0% | |
| TGGGGAAATGATGAAGTTGG+TGG | + | chr8_4:26874152-26874171 | Msa1321370:intron | 45.0% | |
| AAAGAGCTTCAGCAGTTGGT+GGG | - | chr8_4:26874355-26874374 | None:intergenic | 45.0% | |
| CTCAATCCAACGATCCGATT+TGG | - | chr8_4:26874402-26874421 | None:intergenic | 45.0% | |
| ATGTGGACCATGATTCCATC+CGG | - | chr8_4:26874615-26874634 | None:intergenic | 45.0% | |
| !! | TTGATGATGAGGGTGAGTGG+TGG | - | chr8_4:26870870-26870889 | None:intergenic | 50.0% |
| GTTGTGGTTGGCACATCTTG+AGG | - | chr8_4:26870949-26870968 | None:intergenic | 50.0% | |
| !! | CTTGATGATGATGGGGTGTG+AGG | + | chr8_4:26871042-26871061 | Msa1321370:CDS | 50.0% |
| ! | GTACTCACGTGAAGAGTACG+TGG | + | chr8_4:26871170-26871189 | Msa1321370:CDS | 50.0% |
| ! | CGTGAAGAGTACGTGGATAC+CGG | + | chr8_4:26871177-26871196 | Msa1321370:CDS | 50.0% |
| CTTCAGCCACCATCATACTC+CGG | - | chr8_4:26871219-26871238 | None:intergenic | 50.0% | |
| !! | AGTATGATGGTGGCTGAAGG+TGG | + | chr8_4:26871220-26871239 | Msa1321370:CDS | 50.0% |
| !! | AGTGATGGTGGTGCTTCTTC+TGG | + | chr8_4:26871247-26871266 | Msa1321370:CDS | 50.0% |
| !! | ACAGGGCACTGTAATCAGAG+AGG | - | chr8_4:26871541-26871560 | None:intergenic | 50.0% |
| GTGCCCTGTACTAATCAGAG+AGG | + | chr8_4:26871552-26871571 | Msa1321370:intron | 50.0% | |
| GGCAAAGTCTGCTTGAAACC+AGG | - | chr8_4:26871644-26871663 | None:intergenic | 50.0% | |
| GAAGCAGGGTAAGCACTAGT+TGG | - | chr8_4:26871908-26871927 | None:intergenic | 50.0% | |
| GAGTGGTCCAAAGCTTGATG+AGG | - | chr8_4:26873244-26873263 | None:intergenic | 50.0% | |
| !! | TGAGAGACTGGTCTGAGACA+TGG | - | chr8_4:26873542-26873561 | None:intergenic | 50.0% |
| ! | GGAAATGATGAAGGTGGTGG+TGG | - | chr8_4:26873565-26873584 | None:intergenic | 50.0% |
| ACCATCGCCGGCAAAGAAAA+CGG | + | chr8_4:26873618-26873637 | Msa1321370:intron | 50.0% | |
| AACTTCTTCCATGGCGATGC+TGG | + | chr8_4:26873912-26873931 | Msa1321370:intron | 50.0% | |
| ACTTCTTCCATGGCGATGCT+GGG | + | chr8_4:26873913-26873932 | Msa1321370:intron | 50.0% | |
| TGTGAGTGAGTGGGACATGA+AGG | + | chr8_4:26874186-26874205 | Msa1321370:intron | 50.0% | |
| !! | CAGTTGGTGGGGTTTAGCAT+GGG | - | chr8_4:26874343-26874362 | None:intergenic | 50.0% |
| ! | AAGAGCTTCAGCAGTTGGTG+GGG | - | chr8_4:26874354-26874373 | None:intergenic | 50.0% |
| GAAAGAGCTTCAGCAGTTGG+TGG | - | chr8_4:26874356-26874375 | None:intergenic | 50.0% | |
| GGTGAGTGGTGGTTAGGAGT+GGG | - | chr8_4:26870859-26870878 | None:intergenic | 55.0% | |
| GATGAGGGTGAGTGGTGGTT+AGG | - | chr8_4:26870865-26870884 | None:intergenic | 55.0% | |
| !! | CGGAGTATGATGGTGGCTGA+AGG | + | chr8_4:26871217-26871236 | Msa1321370:CDS | 55.0% |
| GCTGAAGGTGGTGACAGTGA+TGG | + | chr8_4:26871232-26871251 | Msa1321370:CDS | 55.0% | |
| GAAGGTGGTGACAGTGATGG+TGG | + | chr8_4:26871235-26871254 | Msa1321370:CDS | 55.0% | |
| TGCTGAGGTGGCGTTTAGCA+TGG | + | chr8_4:26873381-26873400 | Msa1321370:intron | 55.0% | |
| !! | GAGACTGGTCTGAGACATGG+AGG | - | chr8_4:26873539-26873558 | None:intergenic | 55.0% |
| GGGGGAAATGATGAAGGTGG+TGG | - | chr8_4:26873568-26873587 | None:intergenic | 55.0% | |
| ! | ACCGTTTTCTTTGCCGGCGA+TGG | - | chr8_4:26873622-26873641 | None:intergenic | 55.0% |
| CTTCTTCCATGGCGATGCTG+GGG | + | chr8_4:26873914-26873933 | Msa1321370:intron | 55.0% | |
| !! | TGATGAAGTTGGTGGTCCGG+TGG | + | chr8_4:26874160-26874179 | Msa1321370:intron | 55.0% |
| !! | GATGAAGTTGGTGGTCCGGT+GGG | + | chr8_4:26874161-26874180 | Msa1321370:intron | 55.0% |
| !! | GCAGTTGGTGGGGTTTAGCA+TGG | - | chr8_4:26874344-26874363 | None:intergenic | 55.0% |
| GGGTGAGTGGTGGTTAGGAG+TGG | - | chr8_4:26870860-26870879 | None:intergenic | 60.0% | |
| !! | CGTGGATACCGGCTTCGATG+AGG | + | chr8_4:26871188-26871207 | Msa1321370:CDS | 60.0% |
| !! | GGATACCGGCTTCGATGAGG+CGG | + | chr8_4:26871191-26871210 | Msa1321370:CDS | 60.0% |
| !! | GATACCGGCTTCGATGAGGC+GGG | + | chr8_4:26871192-26871211 | Msa1321370:CDS | 60.0% |
| !! | AGGTGGTGGTGGTGAGAGAC+TGG | - | chr8_4:26873554-26873573 | None:intergenic | 60.0% |
| CCACTCACTCACACACCCAC+CGG | - | chr8_4:26874179-26874198 | None:intergenic | 60.0% | |
| CGGTGGGTGTGTGAGTGAGT+GGG | + | chr8_4:26874177-26874196 | Msa1321370:intron | 60.0% | |
| GAGGCGGGACCGGAGTATGA+TGG | + | chr8_4:26871207-26871226 | Msa1321370:CDS | 65.0% | |
| GCGGGACCGGAGTATGATGG+TGG | + | chr8_4:26871210-26871229 | Msa1321370:CDS | 65.0% | |
| GCAGGCGCACGAACATAGCG+CGG | - | chr8_4:26871665-26871684 | None:intergenic | 65.0% | |
| TCCATGGCGATGCTGGGGAG+AGG | + | chr8_4:26873919-26873938 | Msa1321370:intron | 65.0% | |
| CCATGGCGATGCTGGGGAGA+GGG | + | chr8_4:26873920-26873939 | Msa1321370:intron | 65.0% | |
| CATGGCGATGCTGGGGAGAG+GGG | + | chr8_4:26873921-26873940 | Msa1321370:intron | 65.0% | |
| CCGGTGGGTGTGTGAGTGAG+TGG | + | chr8_4:26874176-26874195 | Msa1321370:intron | 65.0% | |
| CGGTCCCGCCTCATCGAAGC+CGG | - | chr8_4:26871199-26871218 | None:intergenic | 70.0% | |
| CGGCTTCGATGAGGCGGGAC+CGG | + | chr8_4:26871197-26871216 | Msa1321370:CDS | 70.0% | |
| CCCTCTCCCCAGCATCGCCA+TGG | - | chr8_4:26873923-26873942 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 26870517 | 26874958 | 26870517 | ID=Msa1321370;Name=Msa1321370 |
| chr8_4 | mRNA | 26870517 | 26874958 | 26870517 | ID=Msa1321370-mRNA-1;Parent=Msa1321370;Name=Msa1321370-mRNA-1;_AED=0.00;_eAED=0.00;_QI=190|1|1|1|0.5|0.33|3|170|330 |
| chr8_4 | exon | 26870517 | 26871400 | 26870517 | ID=Msa1321370-mRNA-1:exon:9113;Parent=Msa1321370-mRNA-1 |
| chr8_4 | exon | 26871639 | 26871949 | 26871639 | ID=Msa1321370-mRNA-1:exon:9114;Parent=Msa1321370-mRNA-1 |
| chr8_4 | exon | 26874801 | 26874958 | 26874801 | ID=Msa1321370-mRNA-1:exon:9115;Parent=Msa1321370-mRNA-1 |
| chr8_4 | five_prime_UTR | 26870517 | 26870706 | 26870517 | ID=Msa1321370-mRNA-1:five_prime_utr;Parent=Msa1321370-mRNA-1 |
| chr8_4 | CDS | 26870707 | 26871400 | 26870707 | ID=Msa1321370-mRNA-1:cds;Parent=Msa1321370-mRNA-1 |
| chr8_4 | CDS | 26871639 | 26871937 | 26871639 | ID=Msa1321370-mRNA-1:cds;Parent=Msa1321370-mRNA-1 |
| chr8_4 | three_prime_UTR | 26871938 | 26871949 | 26871938 | ID=Msa1321370-mRNA-1:three_prime_utr;Parent=Msa1321370-mRNA-1 |
| chr8_4 | three_prime_UTR | 26874801 | 26874958 | 26874801 | ID=Msa1321370-mRNA-1:three_prime_utr;Parent=Msa1321370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
