AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1322640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1322640 MtrunA17_Chr8g0355261 90.444 450 26 4 1 444 1 439 0.0 828
Msa1322640 MtrunA17_Chr6g0453321 33.268 508 250 18 9 443 3 494 2.82e-66 220
Msa1322640 MtrunA17_Chr4g0042481 33.803 497 226 19 11 442 5 463 3.32e-64 214
Msa1322640 MtrunA17_Chr7g0217581 32.353 510 259 19 1 443 92 582 1.28e-61 210
Msa1322640 MtrunA17_Chr3g0092111 35.613 424 198 16 64 443 72 464 1.77e-59 201
Msa1322640 MtrunA17_Chr7g0254161 36.675 379 163 10 103 444 86 424 6.93e-58 196
Msa1322640 MtrunA17_Chr5g0417551 31.868 455 201 20 12 444 4 371 4.45e-45 160
Msa1322640 MtrunA17_Chr5g0417561 32.880 368 157 13 81 444 82 363 3.13e-43 155
Msa1322640 MtrunA17_Chr6g0460721 34.708 291 127 12 66 317 32 298 2.18e-37 139
Msa1322640 MtrunA17_Chr6g0460731 28.846 416 165 16 11 353 10 367 2.06e-35 134
Msa1322640 MtrunA17_Chr2g0283811 77.419 62 14 0 110 171 39 100 2.09e-32 120
Msa1322640 MtrunA17_Chr5g0417571 64.198 81 29 0 93 173 113 193 2.44e-31 122
Msa1322640 MtrunA17_Chr5g0417601 62.338 77 29 0 95 171 117 193 1.31e-29 119
Msa1322640 MtrunA17_Chr5g0417601 31.892 185 74 8 272 444 237 381 4.90e-14 73.6
Msa1322640 MtrunA17_Chr4g0010151 67.797 59 19 0 114 172 78 136 3.91e-25 105
Msa1322640 MtrunA17_Chr3g0127201 59.701 67 27 0 107 173 16 82 4.73e-25 104
Msa1322640 MtrunA17_Chr2g0308011 74.000 50 13 0 117 166 36 85 8.42e-25 101
Msa1322640 MtrunA17_Chr4g0061761 71.698 53 15 0 116 168 38 90 2.56e-24 102
Msa1322640 MtrunA17_Chr8g0346551 61.290 62 24 0 113 174 19 80 5.48e-24 100
Msa1322640 MtrunA17_Chr2g0328021 67.857 56 18 0 118 173 62 117 6.81e-24 100
Msa1322640 MtrunA17_Chr4g0031411 66.102 59 20 0 114 172 71 129 8.11e-24 101
Msa1322640 MtrunA17_Chr8g0374111 65.455 55 19 0 118 172 29 83 8.55e-24 99.4
Msa1322640 MtrunA17_Chr8g0374251 72.222 54 15 0 118 171 68 121 1.49e-23 101
Msa1322640 MtrunA17_Chr2g0326001 63.333 60 22 0 113 172 35 94 1.58e-23 100
Msa1322640 MtrunA17_Chr8g0341671 69.231 52 16 0 118 169 20 71 3.98e-23 97.1
Msa1322640 MtrunA17_Chr8g0367161 46.914 81 43 0 92 172 6 86 9.55e-23 98.6
Msa1322640 MtrunA17_Chr7g0237921 69.811 53 16 0 120 172 78 130 1.17e-22 98.6
Msa1322640 MtrunA17_Chr1g0188851 56.452 62 27 0 112 173 37 98 1.90e-22 97.1
Msa1322640 MtrunA17_Chr7g0223311 69.811 53 16 0 120 172 79 131 2.57e-22 98.2
Msa1322640 MtrunA17_Chr5g0411951 65.455 55 19 0 114 168 39 93 5.83e-22 96.3
Msa1322640 MtrunA17_Chr4g0047001 67.925 53 17 0 120 172 57 109 6.16e-22 97.1
Msa1322640 MtrunA17_Chr4g0030051 45.098 102 42 3 107 196 29 128 1.58e-21 94.4
Msa1322640 MtrunA17_Chr3g0117601 53.521 71 32 1 99 168 41 111 5.12e-21 93.6
Msa1322640 MtrunA17_Chr3g0126201 64.151 53 19 0 120 172 53 105 7.06e-21 93.2
Msa1322640 MtrunA17_Chr2g0282511 68.000 50 16 0 117 166 44 93 1.04e-20 92.4
Msa1322640 MtrunA17_Chr2g0282441 68.000 50 16 0 120 169 27 76 1.13e-20 92.8
Msa1322640 MtrunA17_Chr1g0177251 62.963 54 20 0 120 173 14 67 1.28e-20 91.7
Msa1322640 MtrunA17_Chr4g0047761 65.455 55 18 1 118 172 72 125 1.56e-20 92.0
Msa1322640 MtrunA17_Chr2g0282051 66.038 53 17 1 120 172 48 99 2.11e-20 90.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1322640 AT5G39660.3 37.113 388 181 12 83 443 105 456 4.67e-60 203
Msa1322640 AT5G39660.1 37.113 388 181 12 83 443 105 456 4.67e-60 203
Msa1322640 AT5G39660.2 37.113 388 181 12 83 443 105 456 4.67e-60 203
Msa1322640 AT3G47500.1 34.526 475 236 20 12 444 7 448 9.86e-59 199
Msa1322640 AT1G69570.1 29.087 471 223 14 9 444 3 397 5.90e-45 161
Msa1322640 AT1G26790.1 29.834 362 167 16 95 444 86 372 6.44e-36 136
Msa1322640 AT1G29160.1 69.863 73 22 0 99 171 43 115 4.02e-34 126
Msa1322640 AT5G62430.1 70.130 77 22 1 95 171 32 107 6.83e-34 129
Msa1322640 AT5G62430.1 42.718 103 40 4 350 444 207 298 2.00e-12 68.2
Msa1322640 AT2G34140.1 76.667 60 14 0 112 171 52 111 2.60e-32 121
Msa1322640 AT5G60850.1 66.667 69 21 1 118 186 51 117 1.48e-26 109
Msa1322640 AT3G55370.1 68.333 60 19 0 114 173 72 131 5.25e-25 105
Msa1322640 AT3G55370.2 68.333 60 19 0 114 173 72 131 5.74e-25 105
Msa1322640 AT3G55370.3 68.333 60 19 0 114 173 117 176 8.24e-25 105
Msa1322640 AT1G51700.1 68.421 57 17 1 118 173 33 89 1.58e-24 100
Msa1322640 AT2G37590.1 65.000 60 21 0 114 173 85 144 1.72e-24 103
Msa1322640 AT2G28810.2 69.643 56 17 0 114 169 73 128 2.39e-24 103
Msa1322640 AT3G61850.2 52.941 85 38 1 113 195 57 141 3.15e-24 102
Msa1322640 AT3G61850.3 52.941 85 38 1 113 195 57 141 3.15e-24 102
Msa1322640 AT3G61850.1 52.941 85 38 1 113 195 69 153 3.25e-24 102
Msa1322640 AT2G28810.1 69.643 56 17 0 114 169 90 145 4.13e-24 103
Msa1322640 AT3G61850.5 52.941 85 38 1 113 195 57 141 5.05e-24 102
Msa1322640 AT3G61850.4 52.941 85 38 1 113 195 69 153 5.79e-24 102
Msa1322640 AT3G45610.1 51.948 77 32 1 102 173 19 95 5.83e-24 100
Msa1322640 AT5G60200.1 61.667 60 23 0 114 173 51 110 9.02e-24 100
Msa1322640 AT1G07640.1 69.091 55 17 0 118 172 21 75 1.74e-23 100
Msa1322640 AT3G50410.1 50.000 80 30 1 103 172 5 84 1.90e-23 99.4
Msa1322640 AT4G38000.1 68.966 58 17 1 117 174 40 96 1.95e-23 99.0
Msa1322640 AT3G21270.1 69.811 53 16 0 118 170 29 81 1.97e-23 97.8
Msa1322640 AT1G07640.2 69.091 55 17 0 118 172 77 131 2.96e-23 100
Msa1322640 AT1G07640.3 69.091 55 17 0 118 172 85 139 3.74e-23 100
Msa1322640 AT5G65590.1 69.643 56 17 0 118 173 41 96 5.32e-23 99.4
Msa1322640 AT4G24060.1 56.061 66 29 0 107 172 42 107 5.80e-23 99.8
Msa1322640 AT5G02460.1 66.102 59 20 0 114 172 91 149 5.87e-23 100
Msa1322640 AT1G64620.1 69.231 52 16 0 115 166 46 97 1.58e-22 98.6
Msa1322640 AT2G28510.1 68.519 54 17 0 120 173 50 103 3.97e-22 96.3
Msa1322640 AT4G00940.1 58.730 63 26 0 113 175 63 125 5.99e-22 95.9
Msa1322640 AT4G00940.3 58.730 63 26 0 113 175 63 125 5.99e-22 95.9
Msa1322640 AT4G00940.2 58.730 63 26 0 113 175 63 125 5.99e-22 95.9
Msa1322640 AT1G47655.1 69.388 49 15 0 118 166 29 77 1.06e-21 93.2
Msa1322640 AT5G66940.1 53.623 69 24 1 104 172 26 86 1.25e-21 93.6
Msa1322640 AT1G28310.1 65.455 55 19 0 118 172 27 81 1.41e-21 95.1
Msa1322640 AT1G28310.2 65.455 55 19 0 118 172 51 105 2.03e-21 95.1
Msa1322640 AT4G21050.1 44.944 89 47 1 105 191 11 99 3.14e-21 92.0
Msa1322640 AT2G46590.2 64.151 53 19 0 113 165 75 127 1.04e-20 93.6
Msa1322640 AT2G46590.1 64.151 53 19 0 113 165 63 115 1.07e-20 93.6
Msa1322640 AT3G52440.1 62.264 53 20 0 120 172 27 79 1.92e-20 90.5
Msa1322640 AT3G52440.2 62.264 53 20 0 120 172 46 98 2.42e-20 90.9
Msa1322640 AT1G21340.1 61.111 54 21 0 120 173 40 93 3.40e-20 90.1
Msa1322640 AT5G62940.1 65.306 49 17 0 120 168 75 123 1.78e-19 90.1
Msa1322640 AT4G21040.1 67.347 49 16 0 120 168 27 75 4.19e-18 83.6
Msa1322640 AT4G21080.1 65.306 49 17 0 120 168 27 75 2.20e-17 82.0
Msa1322640 AT4G21030.1 50.769 65 25 2 106 163 2 66 1.49e-12 66.6

Find 101 sgRNAs with CRISPR-Local

Find 342 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATACAGTGAAGCAGAATATT+TGG 0.189077 8_4:+29786432 Msa1322640:CDS
ATTGGGGTTGTATGCCAAAT+TGG 0.209941 8_4:+29786279 Msa1322640:CDS
AAAACACTTCCTTTCATAAT+AGG 0.219092 8_4:-29786545 None:intergenic
TCCATTTGGCCAACCCAATT+TGG 0.234208 8_4:-29786293 None:intergenic
GGTAATAGGTCACCAACTTT+AGG 0.247029 8_4:+29786377 Msa1322640:CDS
GGACTTGAAGTTATGTTATC+AGG 0.270788 8_4:-29786215 None:intergenic
ACCGATGACACCTTCATATT+GGG 0.274088 8_4:+29786262 Msa1322640:CDS
TTGCTTATTTCTACGCTTAC+CGG 0.293241 8_4:-29785841 None:intergenic
TTGATTGTCAGTATCTCTTT+TGG 0.303295 8_4:-29785646 None:intergenic
GGACAGCTGGTGGAGTAATT+AGG 0.315052 8_4:+29785802 Msa1322640:CDS
TACCGATGACACCTTCATAT+TGG 0.324325 8_4:+29786261 Msa1322640:CDS
GTAATAGGTCACCAACTTTA+GGG 0.357252 8_4:+29786378 Msa1322640:CDS
GAACTCTTAGCAGCCTCTTC+CGG 0.361876 8_4:-29786482 None:intergenic
GTGGTACTTGTTCCGGTAAT+AGG 0.368265 8_4:+29786363 Msa1322640:CDS
TTGTGGATTAGCTTGTTTGC+TGG 0.369067 8_4:-29785532 None:intergenic
CAATACCGGTACTTTGAAAC+TGG 0.373072 8_4:+29785584 Msa1322640:CDS
GCCAAATTGGGTTGGCCAAA+TGG 0.379899 8_4:+29786292 Msa1322640:CDS
CATTCCATCCCCTTCATCTT+CGG 0.385022 8_4:+29786334 Msa1322640:CDS
GCTAGCAGTGGTACTTGTTC+CGG 0.387977 8_4:+29786356 Msa1322640:CDS
GAAAGTGGAATAGAGCATAT+TGG 0.393412 8_4:+29786086 Msa1322640:CDS
TACAGTGAAGCAGAATATTT+GGG 0.407723 8_4:+29786433 Msa1322640:CDS
CTAACGATAATTCTTCCATT+TGG 0.407757 8_4:-29786307 None:intergenic
ATTAGTTCTATGAACTGCTT+TGG 0.409555 8_4:-29785610 None:intergenic
GTACCGGTATTGTACATGTT+TGG 0.410276 8_4:-29785573 None:intergenic
GTAATTAGGAATGTTCCTAT+TGG 0.410965 8_4:+29785816 Msa1322640:CDS
TCTACTGCCATCATGGTTGC+AGG 0.411890 8_4:-29786236 None:intergenic
GGTACTGCATCAAGGGTAAC+AGG 0.411943 8_4:-29785888 None:intergenic
CGAGAACTTGCATTTGACTT+AGG 0.412589 8_4:-29786581 None:intergenic
AGCTTCTGAATCCAAGGAAA+TGG 0.414730 8_4:+29786055 Msa1322640:CDS
CTACGCTTACCGGCTCCAAT+AGG 0.417710 8_4:-29785831 None:intergenic
TTCAGAATACTCCATTTCCT+TGG 0.422020 8_4:-29786066 None:intergenic
GGACACGGCAGAACCTTGTC+TGG 0.427129 8_4:-29785687 None:intergenic
GTTTCTACCGATTCACTAAG+AGG 0.436362 8_4:-29785942 None:intergenic
GTGTCCTCGCTGCAATAGTT+TGG 0.447623 8_4:+29785704 Msa1322640:CDS
CACGCTTTCCTGAAAGGATC+CGG 0.450006 8_4:-29786657 None:intergenic
AGAAGCTCTCACAGAAGAGC+TGG 0.450791 8_4:-29786039 None:intergenic
GACTTATCCATGTTGGAATC+CGG 0.451018 8_4:+29786181 Msa1322640:CDS
CTACAATGTTTCCCTAAAGT+TGG 0.453946 8_4:-29786389 None:intergenic
TAAAGTTGGTGACCTATTAC+CGG 0.455598 8_4:-29786375 None:intergenic
TTGGGGTTGTATGCCAAATT+GGG 0.467016 8_4:+29786280 Msa1322640:CDS
AACTATCAGAATTAATGATC+CGG 0.479510 8_4:+29786463 Msa1322640:CDS
TGCCAGAGGTATTGGACAGC+TGG 0.480992 8_4:+29785789 Msa1322640:CDS
CCGGAGCGAGAGAAAGCAGC+AGG 0.481752 8_4:-29786638 None:intergenic
ATTATTACTCTGCTCCTCCA+TGG 0.483782 8_4:+29786159 Msa1322640:CDS
CGGTACTTCTACTGCCATCA+TGG 0.503743 8_4:-29786243 None:intergenic
GGAAGTTCCTCTTAGTGAAT+CGG 0.506714 8_4:+29785935 Msa1322640:CDS
GGTTGTATGCCAAATTGGGT+TGG 0.508787 8_4:+29786284 Msa1322640:CDS
GGTCACCAGTTTCAAAGTAC+CGG 0.509083 8_4:-29785589 None:intergenic
AGAAACTGTGTTAAATCTCA+AGG 0.509219 8_4:+29785959 Msa1322640:CDS
AGGCTGCTAAGAGTTCTATA+TGG 0.510382 8_4:+29786489 Msa1322640:CDS
ACTAAGAGGAACTTCCTCCT+TGG 0.511294 8_4:-29785928 None:intergenic
CTCCATGGACTTATCCATGT+TGG 0.511657 8_4:+29786174 Msa1322640:CDS
CCTGCTGCTTTCTCTCGCTC+CGG 0.514923 8_4:+29786638 Msa1322640:CDS
CACCAGCTGTCCAATACCTC+TGG 0.521554 8_4:-29785791 None:intergenic
GAAATGGAGTATTCTGAAAG+TGG 0.522372 8_4:+29786071 Msa1322640:CDS
CAGAATTAATGATCCGGAAG+AGG 0.524329 8_4:+29786469 Msa1322640:CDS
TTAGGGAAACATTGTAGAGA+TGG 0.526954 8_4:+29786395 Msa1322640:CDS
CACTGCTAGCCGAAGATGAA+GGG 0.530871 8_4:-29786343 None:intergenic
AGGAATGTTCCTATTGGAGC+CGG 0.533831 8_4:+29785822 Msa1322640:CDS
GGCATACAACCCCAATATGA+AGG 0.535682 8_4:-29786272 None:intergenic
ATATTACACGCTTTCCTGAA+AGG 0.538533 8_4:-29786663 None:intergenic
TTGGAATCTATGTGTATGAC+AGG 0.546648 8_4:-29785909 None:intergenic
AATGAAAAGCATGACCATGA+TGG 0.548748 8_4:-29784372 None:intergenic
CCACTGCTAGCCGAAGATGA+AGG 0.549382 8_4:-29786344 None:intergenic
ATTCCAAACATGTACAATAC+CGG 0.552268 8_4:+29785570 Msa1322640:CDS
TGTGAGAGCTTCTGAATCCA+AGG 0.559146 8_4:+29786049 Msa1322640:CDS
TAATAATGAAGTGAATGTAA+AGG 0.559539 8_4:-29786143 None:intergenic
TTATCAGGCTTAAATGCCAC+CGG 0.562271 8_4:-29786200 None:intergenic
TGTCATACACATAGATTCCA+AGG 0.569094 8_4:+29785911 Msa1322640:CDS
TATGACAGGTACTGCATCAA+GGG 0.571285 8_4:-29785895 None:intergenic
TTCAAGTCCTGCAACCATGA+TGG 0.572277 8_4:+29786229 Msa1322640:CDS
CCCCAATATGAAGGTGTCAT+CGG 0.575122 8_4:-29786263 None:intergenic
CAGAACAAACCTATTATGAA+AGG 0.575243 8_4:+29786536 Msa1322640:CDS
AAACTATTGCAGCGAGGACA+CGG 0.577128 8_4:-29785702 None:intergenic
ATAGTATTAGCATCTTCTTG+TGG 0.578337 8_4:-29785549 None:intergenic
ATGGAAGAATTATCGTTAGT+CGG 0.583127 8_4:+29786311 Msa1322640:CDS
ACTTTGACACCACAATGCAA+TGG 0.588024 8_4:+29786113 Msa1322640:CDS
TGTTGATGTTCGTACGAATG+AGG 0.589965 8_4:+29785506 Msa1322640:CDS
TTCCAACATGGATAAGTCCA+TGG 0.593931 8_4:-29786176 None:intergenic
GTATGACAGGTACTGCATCA+AGG 0.597457 8_4:-29785896 None:intergenic
TCCACATCAACAATCCATCA+TGG 0.598956 8_4:+29784358 Msa1322640:CDS
ACCATGATGGATTGTTGATG+TGG 0.602567 8_4:-29784359 None:intergenic
CCGATGACACCTTCATATTG+GGG 0.607080 8_4:+29786263 Msa1322640:CDS
CTAGCCGAAGATGAAGGGGA+TGG 0.608686 8_4:-29786338 None:intergenic
CCTTCATCTTCGGCTAGCAG+TGG 0.611094 8_4:+29786344 Msa1322640:CDS
GGAACTTGACAACTCTGCAA+AGG 0.613069 8_4:-29785867 None:intergenic
CAGAGGTATTGGACAGCTGG+TGG 0.613246 8_4:+29785792 Msa1322640:CDS
ATTACAATGTTAACCAACCA+AGG 0.617440 8_4:+29785751 Msa1322640:CDS
GGACTCTTCTGCTGTCAAAG+AGG 0.617502 8_4:+29786001 Msa1322640:CDS
GAAACTGTGTTAAATCTCAA+GGG 0.626874 8_4:+29785960 Msa1322640:CDS
GTGAATCTGTGAATCTGTGG+TGG 0.627558 8_4:-29784330 None:intergenic
GGAATTAAGCCATTGCATTG+TGG 0.632188 8_4:-29786122 None:intergenic
ACTGCTAGCCGAAGATGAAG+GGG 0.636553 8_4:-29786342 None:intergenic
AATGCCACCGGATTCCAACA+TGG 0.642061 8_4:-29786188 None:intergenic
CGGAGCGAGAGAAAGCAGCA+GGG 0.655440 8_4:-29786637 None:intergenic
TTATCCATGTTGGAATCCGG+TGG 0.657026 8_4:+29786184 Msa1322640:CDS
TGAATCTGTGAATCTGTGGT+GGG 0.669351 8_4:-29784329 None:intergenic
AGAGTGAATCTGTGAATCTG+TGG 0.680020 8_4:-29784333 None:intergenic
GTCTCCAAACTATTGCAGCG+AGG 0.702604 8_4:-29785708 None:intergenic
CAACATGGATAAGTCCATGG+AGG 0.737932 8_4:-29786173 None:intergenic
CATACACATAGATTCCAAGG+AGG 0.765853 8_4:+29785914 Msa1322640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAAAATGAAATATGTT+AGG + chr8_4:29785016-29785035 Msa1322640:intron 10.0%
!! AAATTAAAATGAAATATGTT+AGG + chr8_4:29785016-29785035 Msa1322640:intron 10.0%
!! ATGTAAGAAAGATAAAAAAA+AGG - chr8_4:29784417-29784436 None:intergenic 15.0%
!!! ATCTTTCTTACATATTTTTT+TGG + chr8_4:29784424-29784443 Msa1322640:intron 15.0%
!!! AAAATTTTAAGCAAACTTAA+TGG + chr8_4:29784472-29784491 Msa1322640:intron 15.0%
!!! TTTGAAAAAGTCATTATTTT+CGG + chr8_4:29785334-29785353 Msa1322640:intron 15.0%
!! ATGTAAGAAAGATAAAAAAA+AGG - chr8_4:29784417-29784436 None:intergenic 15.0%
!!! ATCTTTCTTACATATTTTTT+TGG + chr8_4:29784424-29784443 Msa1322640:intron 15.0%
!!! AAAATTTTAAGCAAACTTAA+TGG + chr8_4:29784472-29784491 Msa1322640:intron 15.0%
!!! TTTGAAAAAGTCATTATTTT+CGG + chr8_4:29785334-29785353 Msa1322640:intron 15.0%
!! AGATAAAAAAAAGGTGAAAA+AGG - chr8_4:29784408-29784427 None:intergenic 20.0%
!!! TGTTTGATAATTTGTTTTGA+AGG + chr8_4:29784631-29784650 Msa1322640:intron 20.0%
!!! GAATTATTTTTGTTTGAATC+TGG + chr8_4:29784710-29784729 Msa1322640:intron 20.0%
!! TGACATGAAAAATGTTAAAT+TGG + chr8_4:29784769-29784788 Msa1322640:intron 20.0%
!! TAATCAAACAGTTAAAGAAT+AGG - chr8_4:29785113-29785132 None:intergenic 20.0%
!!! TTTTGGTATTGTTTAATTTG+TGG + chr8_4:29785157-29785176 Msa1322640:intron 20.0%
!!! TTTGGTATTGTTTAATTTGT+GGG + chr8_4:29785158-29785177 Msa1322640:intron 20.0%
!!! TAATGACTTTTTCAAATTAG+CGG - chr8_4:29785330-29785349 None:intergenic 20.0%
!!! TATCAATGAGTTATAACTTT+TGG + chr8_4:29785393-29785412 Msa1322640:intron 20.0%
!! TAATAATGAAGTGAATGTAA+AGG - chr8_4:29786146-29786165 None:intergenic 20.0%
!!! TCATTAATTCTGATAGTTTT+AGG - chr8_4:29786461-29786480 None:intergenic 20.0%
!! AGATAAAAAAAAGGTGAAAA+AGG - chr8_4:29784408-29784427 None:intergenic 20.0%
!!! TGTTTGATAATTTGTTTTGA+AGG + chr8_4:29784631-29784650 Msa1322640:intron 20.0%
!!! GAATTATTTTTGTTTGAATC+TGG + chr8_4:29784710-29784729 Msa1322640:intron 20.0%
!! TGACATGAAAAATGTTAAAT+TGG + chr8_4:29784769-29784788 Msa1322640:intron 20.0%
!! TAATCAAACAGTTAAAGAAT+AGG - chr8_4:29785113-29785132 None:intergenic 20.0%
!!! TTTTGGTATTGTTTAATTTG+TGG + chr8_4:29785157-29785176 Msa1322640:intron 20.0%
!!! TTTGGTATTGTTTAATTTGT+GGG + chr8_4:29785158-29785177 Msa1322640:intron 20.0%
!!! TAATGACTTTTTCAAATTAG+CGG - chr8_4:29785330-29785349 None:intergenic 20.0%
!!! TATCAATGAGTTATAACTTT+TGG + chr8_4:29785393-29785412 Msa1322640:intron 20.0%
!! TAATAATGAAGTGAATGTAA+AGG - chr8_4:29786146-29786165 None:intergenic 20.0%
!!! TCATTAATTCTGATAGTTTT+AGG - chr8_4:29786461-29786480 None:intergenic 20.0%
! TACTATTCGTATATAGTTCT+AGG + chr8_4:29784512-29784531 Msa1322640:intron 25.0%
!! GTGTTACTATAGAAAATAAG+TGG + chr8_4:29784674-29784693 Msa1322640:intron 25.0%
! TACTATAGAAAATAAGTGGT+AGG + chr8_4:29784678-29784697 Msa1322640:intron 25.0%
! ACTATAGAAAATAAGTGGTA+GGG + chr8_4:29784679-29784698 Msa1322640:intron 25.0%
!!! TGAATCTGGTTTTTTTAAGT+TGG + chr8_4:29784724-29784743 Msa1322640:intron 25.0%
! AAATTGGACCAAATTAATTG+AGG + chr8_4:29784785-29784804 Msa1322640:intron 25.0%
! TGTTCTATTTACTGTATCAT+TGG + chr8_4:29784810-29784829 Msa1322640:intron 25.0%
!! TTAATTTTGTGTTAATCCTC+TGG - chr8_4:29785003-29785022 None:intergenic 25.0%
! TTTGAACTTAACATAACAAC+AGG - chr8_4:29785059-29785078 None:intergenic 25.0%
! AAATCAACGTTGTTAAATAG+TGG + chr8_4:29785208-29785227 Msa1322640:intron 25.0%
!! TTGATAGTATGCATTTCTAT+CGG - chr8_4:29785379-29785398 None:intergenic 25.0%
! TTAAAAAGACAACTTGCATT+AGG - chr8_4:29785420-29785439 None:intergenic 25.0%
! AACTATCAGAATTAATGATC+CGG + chr8_4:29786463-29786482 Msa1322640:CDS 25.0%
! AAAACACTTCCTTTCATAAT+AGG - chr8_4:29786548-29786567 None:intergenic 25.0%
! TACTATTCGTATATAGTTCT+AGG + chr8_4:29784512-29784531 Msa1322640:intron 25.0%
!! GTGTTACTATAGAAAATAAG+TGG + chr8_4:29784674-29784693 Msa1322640:intron 25.0%
! TACTATAGAAAATAAGTGGT+AGG + chr8_4:29784678-29784697 Msa1322640:intron 25.0%
! ACTATAGAAAATAAGTGGTA+GGG + chr8_4:29784679-29784698 Msa1322640:intron 25.0%
!!! TGAATCTGGTTTTTTTAAGT+TGG + chr8_4:29784724-29784743 Msa1322640:intron 25.0%
! AAATTGGACCAAATTAATTG+AGG + chr8_4:29784785-29784804 Msa1322640:intron 25.0%
! TGTTCTATTTACTGTATCAT+TGG + chr8_4:29784810-29784829 Msa1322640:intron 25.0%
!! TTAATTTTGTGTTAATCCTC+TGG - chr8_4:29785003-29785022 None:intergenic 25.0%
! TTTGAACTTAACATAACAAC+AGG - chr8_4:29785059-29785078 None:intergenic 25.0%
! AAATCAACGTTGTTAAATAG+TGG + chr8_4:29785208-29785227 Msa1322640:intron 25.0%
!! TTGATAGTATGCATTTCTAT+CGG - chr8_4:29785379-29785398 None:intergenic 25.0%
! TTAAAAAGACAACTTGCATT+AGG - chr8_4:29785420-29785439 None:intergenic 25.0%
! AACTATCAGAATTAATGATC+CGG + chr8_4:29786463-29786482 Msa1322640:CDS 25.0%
! AAAACACTTCCTTTCATAAT+AGG - chr8_4:29786548-29786567 None:intergenic 25.0%
AAAAGGTGAAAAAGGTGAAA+AGG - chr8_4:29784400-29784419 None:intergenic 30.0%
! AGCAAACTTAATGGATATAG+AGG + chr8_4:29784481-29784500 Msa1322640:intron 30.0%
! AAAGTGTTTATGTTCTAGCT+AGG + chr8_4:29784593-29784612 Msa1322640:intron 30.0%
AGAACACACCTCAATTAATT+TGG - chr8_4:29784796-29784815 None:intergenic 30.0%
ATAATTTCAGCCCAATTACT+CGG - chr8_4:29784851-29784870 None:intergenic 30.0%
ACTAAGTATAAATCGTTCGT+GGG + chr8_4:29784882-29784901 Msa1322640:intron 30.0%
TAAACAATACCAAAAACTCG+TGG - chr8_4:29785152-29785171 None:intergenic 30.0%
TTGTACTAGATAATGTATCG+TGG - chr8_4:29785271-29785290 None:intergenic 30.0%
ATAGTATTAGCATCTTCTTG+TGG - chr8_4:29785552-29785571 None:intergenic 30.0%
ATTCCAAACATGTACAATAC+CGG + chr8_4:29785570-29785589 Msa1322640:CDS 30.0%
!! ATTAGTTCTATGAACTGCTT+TGG - chr8_4:29785613-29785632 None:intergenic 30.0%
! TTGATTGTCAGTATCTCTTT+TGG - chr8_4:29785649-29785668 None:intergenic 30.0%
ATTACAATGTTAACCAACCA+AGG + chr8_4:29785751-29785770 Msa1322640:CDS 30.0%
GTAATTAGGAATGTTCCTAT+TGG + chr8_4:29785816-29785835 Msa1322640:CDS 30.0%
AGAAACTGTGTTAAATCTCA+AGG + chr8_4:29785959-29785978 Msa1322640:CDS 30.0%
GAAACTGTGTTAAATCTCAA+GGG + chr8_4:29785960-29785979 Msa1322640:CDS 30.0%
! AGTCCGTTTCAATTTTTCTA+TGG - chr8_4:29785986-29786005 None:intergenic 30.0%
CTAACGATAATTCTTCCATT+TGG - chr8_4:29786310-29786329 None:intergenic 30.0%
ATGGAAGAATTATCGTTAGT+CGG + chr8_4:29786311-29786330 Msa1322640:CDS 30.0%
ATACAGTGAAGCAGAATATT+TGG + chr8_4:29786432-29786451 Msa1322640:CDS 30.0%
TACAGTGAAGCAGAATATTT+GGG + chr8_4:29786433-29786452 Msa1322640:CDS 30.0%
CAGAACAAACCTATTATGAA+AGG + chr8_4:29786536-29786555 Msa1322640:CDS 30.0%
AAAAGGTGAAAAAGGTGAAA+AGG - chr8_4:29784400-29784419 None:intergenic 30.0%
! AGCAAACTTAATGGATATAG+AGG + chr8_4:29784481-29784500 Msa1322640:intron 30.0%
! AAAGTGTTTATGTTCTAGCT+AGG + chr8_4:29784593-29784612 Msa1322640:intron 30.0%
AGAACACACCTCAATTAATT+TGG - chr8_4:29784796-29784815 None:intergenic 30.0%
ATAATTTCAGCCCAATTACT+CGG - chr8_4:29784851-29784870 None:intergenic 30.0%
ACTAAGTATAAATCGTTCGT+GGG + chr8_4:29784882-29784901 Msa1322640:intron 30.0%
TAAACAATACCAAAAACTCG+TGG - chr8_4:29785152-29785171 None:intergenic 30.0%
TTGTACTAGATAATGTATCG+TGG - chr8_4:29785271-29785290 None:intergenic 30.0%
ATAGTATTAGCATCTTCTTG+TGG - chr8_4:29785552-29785571 None:intergenic 30.0%
ATTCCAAACATGTACAATAC+CGG + chr8_4:29785570-29785589 Msa1322640:CDS 30.0%
!! ATTAGTTCTATGAACTGCTT+TGG - chr8_4:29785613-29785632 None:intergenic 30.0%
! TTGATTGTCAGTATCTCTTT+TGG - chr8_4:29785649-29785668 None:intergenic 30.0%
ATTACAATGTTAACCAACCA+AGG + chr8_4:29785751-29785770 Msa1322640:CDS 30.0%
GTAATTAGGAATGTTCCTAT+TGG + chr8_4:29785816-29785835 Msa1322640:CDS 30.0%
AGAAACTGTGTTAAATCTCA+AGG + chr8_4:29785959-29785978 Msa1322640:CDS 30.0%
GAAACTGTGTTAAATCTCAA+GGG + chr8_4:29785960-29785979 Msa1322640:CDS 30.0%
! AGTCCGTTTCAATTTTTCTA+TGG - chr8_4:29785986-29786005 None:intergenic 30.0%
CTAACGATAATTCTTCCATT+TGG - chr8_4:29786310-29786329 None:intergenic 30.0%
ATGGAAGAATTATCGTTAGT+CGG + chr8_4:29786311-29786330 Msa1322640:CDS 30.0%
ATACAGTGAAGCAGAATATT+TGG + chr8_4:29786432-29786451 Msa1322640:CDS 30.0%
TACAGTGAAGCAGAATATTT+GGG + chr8_4:29786433-29786452 Msa1322640:CDS 30.0%
CAGAACAAACCTATTATGAA+AGG + chr8_4:29786536-29786555 Msa1322640:CDS 30.0%
! GATCCTTCAATCAAGCTTTT+TGG + chr8_4:29784284-29784303 Msa1322640:CDS 35.0%
CTTCCAAAAAGCTTGATTGA+AGG - chr8_4:29784290-29784309 None:intergenic 35.0%
! AATGAAAAGCATGACCATGA+TGG - chr8_4:29784375-29784394 None:intergenic 35.0%
CTGTATCATTGGAATATGTG+TGG + chr8_4:29784821-29784840 Msa1322640:intron 35.0%
CACGAACGATTTATACTTAG+TGG - chr8_4:29784883-29784902 None:intergenic 35.0%
CACTAAGTATAAATCGTTCG+TGG + chr8_4:29784881-29784900 Msa1322640:intron 35.0%
CAGTTAAAGAATAGGACAAC+AGG - chr8_4:29785105-29785124 None:intergenic 35.0%
ATCGTGGAACAACACTAATT+TGG - chr8_4:29785255-29785274 None:intergenic 35.0%
TTTGGTACTCAATTGCAGAA+TGG + chr8_4:29785459-29785478 Msa1322640:intron 35.0%
! CAATTTTTGCAGAAATGCCT+TGG - chr8_4:29785771-29785790 None:intergenic 35.0%
ATTTCTGCAAAAATTGCCAG+AGG + chr8_4:29785775-29785794 Msa1322640:CDS 35.0%
!! TTGCTTATTTCTACGCTTAC+CGG - chr8_4:29785844-29785863 None:intergenic 35.0%
TTGGAATCTATGTGTATGAC+AGG - chr8_4:29785912-29785931 None:intergenic 35.0%
TGTCATACACATAGATTCCA+AGG + chr8_4:29785911-29785930 Msa1322640:CDS 35.0%
GGGCCATAGAAAAATTGAAA+CGG + chr8_4:29785980-29785999 Msa1322640:CDS 35.0%
TTCAGAATACTCCATTTCCT+TGG - chr8_4:29786069-29786088 None:intergenic 35.0%
! GAAATGGAGTATTCTGAAAG+TGG + chr8_4:29786071-29786090 Msa1322640:CDS 35.0%
GAAAGTGGAATAGAGCATAT+TGG + chr8_4:29786086-29786105 Msa1322640:CDS 35.0%
GGACTTGAAGTTATGTTATC+AGG - chr8_4:29786218-29786237 None:intergenic 35.0%
!! TAAAGTTGGTGACCTATTAC+CGG - chr8_4:29786378-29786397 None:intergenic 35.0%
GTAATAGGTCACCAACTTTA+GGG + chr8_4:29786378-29786397 Msa1322640:CDS 35.0%
CTACAATGTTTCCCTAAAGT+TGG - chr8_4:29786392-29786411 None:intergenic 35.0%
TTAGGGAAACATTGTAGAGA+TGG + chr8_4:29786395-29786414 Msa1322640:CDS 35.0%
! GATCCTTCAATCAAGCTTTT+TGG + chr8_4:29784284-29784303 Msa1322640:CDS 35.0%
CTTCCAAAAAGCTTGATTGA+AGG - chr8_4:29784290-29784309 None:intergenic 35.0%
! AATGAAAAGCATGACCATGA+TGG - chr8_4:29784375-29784394 None:intergenic 35.0%
CTGTATCATTGGAATATGTG+TGG + chr8_4:29784821-29784840 Msa1322640:intron 35.0%
CACGAACGATTTATACTTAG+TGG - chr8_4:29784883-29784902 None:intergenic 35.0%
CACTAAGTATAAATCGTTCG+TGG + chr8_4:29784881-29784900 Msa1322640:intron 35.0%
CAGTTAAAGAATAGGACAAC+AGG - chr8_4:29785105-29785124 None:intergenic 35.0%
ATCGTGGAACAACACTAATT+TGG - chr8_4:29785255-29785274 None:intergenic 35.0%
TTTGGTACTCAATTGCAGAA+TGG + chr8_4:29785459-29785478 Msa1322640:intron 35.0%
! CAATTTTTGCAGAAATGCCT+TGG - chr8_4:29785771-29785790 None:intergenic 35.0%
ATTTCTGCAAAAATTGCCAG+AGG + chr8_4:29785775-29785794 Msa1322640:CDS 35.0%
!! TTGCTTATTTCTACGCTTAC+CGG - chr8_4:29785844-29785863 None:intergenic 35.0%
TTGGAATCTATGTGTATGAC+AGG - chr8_4:29785912-29785931 None:intergenic 35.0%
TGTCATACACATAGATTCCA+AGG + chr8_4:29785911-29785930 Msa1322640:CDS 35.0%
GGGCCATAGAAAAATTGAAA+CGG + chr8_4:29785980-29785999 Msa1322640:CDS 35.0%
TTCAGAATACTCCATTTCCT+TGG - chr8_4:29786069-29786088 None:intergenic 35.0%
! GAAATGGAGTATTCTGAAAG+TGG + chr8_4:29786071-29786090 Msa1322640:CDS 35.0%
GAAAGTGGAATAGAGCATAT+TGG + chr8_4:29786086-29786105 Msa1322640:CDS 35.0%
GGACTTGAAGTTATGTTATC+AGG - chr8_4:29786218-29786237 None:intergenic 35.0%
!! TAAAGTTGGTGACCTATTAC+CGG - chr8_4:29786378-29786397 None:intergenic 35.0%
GTAATAGGTCACCAACTTTA+GGG + chr8_4:29786378-29786397 Msa1322640:CDS 35.0%
CTACAATGTTTCCCTAAAGT+TGG - chr8_4:29786392-29786411 None:intergenic 35.0%
TTAGGGAAACATTGTAGAGA+TGG + chr8_4:29786395-29786414 Msa1322640:CDS 35.0%
TGAATCTGTGAATCTGTGGT+GGG - chr8_4:29784332-29784351 None:intergenic 40.0%
AGAGTGAATCTGTGAATCTG+TGG - chr8_4:29784336-29784355 None:intergenic 40.0%
TCCACATCAACAATCCATCA+TGG + chr8_4:29784358-29784377 Msa1322640:CDS 40.0%
!! ACCATGATGGATTGTTGATG+TGG - chr8_4:29784362-29784381 None:intergenic 40.0%
TTCCTGAGTGGGATAATTCT+TGG + chr8_4:29784918-29784937 Msa1322640:intron 40.0%
GTCAGACTTTACTTACGTTC+TGG + chr8_4:29784940-29784959 Msa1322640:intron 40.0%
! GTTAATCCTCTGGTTCCTAA+GGG - chr8_4:29784993-29785012 None:intergenic 40.0%
! TGTTAATCCTCTGGTTCCTA+AGG - chr8_4:29784994-29785013 None:intergenic 40.0%
! CGAGTAAAACCACGAGTTTT+TGG + chr8_4:29785140-29785159 Msa1322640:intron 40.0%
TTAGCGGCATAACAGTTCTA+TGG - chr8_4:29785314-29785333 None:intergenic 40.0%
! TCTATCGGTGCTTTCAATCA+CGG - chr8_4:29785364-29785383 None:intergenic 40.0%
TGTTGATGTTCGTACGAATG+AGG + chr8_4:29785506-29785525 Msa1322640:CDS 40.0%
!! TTGTGGATTAGCTTGTTTGC+TGG - chr8_4:29785535-29785554 None:intergenic 40.0%
! GTACCGGTATTGTACATGTT+TGG - chr8_4:29785576-29785595 None:intergenic 40.0%
!! CAATACCGGTACTTTGAAAC+TGG + chr8_4:29785584-29785603 Msa1322640:CDS 40.0%
!! AGTTTTCAAGAAGCCAGACA+AGG + chr8_4:29785674-29785693 Msa1322640:CDS 40.0%
! TTTTGCAGAAATGCCTTGGT+TGG - chr8_4:29785767-29785786 None:intergenic 40.0%
! GCAAAAATTGCCAGAGGTAT+TGG + chr8_4:29785781-29785800 Msa1322640:CDS 40.0%
! TATGACAGGTACTGCATCAA+GGG - chr8_4:29785898-29785917 None:intergenic 40.0%
CATACACATAGATTCCAAGG+AGG + chr8_4:29785914-29785933 Msa1322640:CDS 40.0%
GGAAGTTCCTCTTAGTGAAT+CGG + chr8_4:29785935-29785954 Msa1322640:CDS 40.0%
!! GTTTCTACCGATTCACTAAG+AGG - chr8_4:29785945-29785964 None:intergenic 40.0%
AGCTTCTGAATCCAAGGAAA+TGG + chr8_4:29786055-29786074 Msa1322640:CDS 40.0%
ACTTTGACACCACAATGCAA+TGG + chr8_4:29786113-29786132 Msa1322640:CDS 40.0%
GGAATTAAGCCATTGCATTG+TGG - chr8_4:29786125-29786144 None:intergenic 40.0%
ATTATTACTCTGCTCCTCCA+TGG + chr8_4:29786159-29786178 Msa1322640:CDS 40.0%
TTCCAACATGGATAAGTCCA+TGG - chr8_4:29786179-29786198 None:intergenic 40.0%
GACTTATCCATGTTGGAATC+CGG + chr8_4:29786181-29786200 Msa1322640:CDS 40.0%
TTATCAGGCTTAAATGCCAC+CGG - chr8_4:29786203-29786222 None:intergenic 40.0%
TACCGATGACACCTTCATAT+TGG + chr8_4:29786261-29786280 Msa1322640:CDS 40.0%
ACCGATGACACCTTCATATT+GGG + chr8_4:29786262-29786281 Msa1322640:CDS 40.0%
ATTGGGGTTGTATGCCAAAT+TGG + chr8_4:29786279-29786298 Msa1322640:CDS 40.0%
TTGGGGTTGTATGCCAAATT+GGG + chr8_4:29786280-29786299 Msa1322640:CDS 40.0%
GGTAATAGGTCACCAACTTT+AGG + chr8_4:29786377-29786396 Msa1322640:CDS 40.0%
CAGAATTAATGATCCGGAAG+AGG + chr8_4:29786469-29786488 Msa1322640:CDS 40.0%
AGGCTGCTAAGAGTTCTATA+TGG + chr8_4:29786489-29786508 Msa1322640:CDS 40.0%
! CGAGAACTTGCATTTGACTT+AGG - chr8_4:29786584-29786603 None:intergenic 40.0%
TGAATCTGTGAATCTGTGGT+GGG - chr8_4:29784332-29784351 None:intergenic 40.0%
AGAGTGAATCTGTGAATCTG+TGG - chr8_4:29784336-29784355 None:intergenic 40.0%
TCCACATCAACAATCCATCA+TGG + chr8_4:29784358-29784377 Msa1322640:CDS 40.0%
!! ACCATGATGGATTGTTGATG+TGG - chr8_4:29784362-29784381 None:intergenic 40.0%
TTCCTGAGTGGGATAATTCT+TGG + chr8_4:29784918-29784937 Msa1322640:intron 40.0%
GTCAGACTTTACTTACGTTC+TGG + chr8_4:29784940-29784959 Msa1322640:intron 40.0%
! GTTAATCCTCTGGTTCCTAA+GGG - chr8_4:29784993-29785012 None:intergenic 40.0%
! TGTTAATCCTCTGGTTCCTA+AGG - chr8_4:29784994-29785013 None:intergenic 40.0%
! CGAGTAAAACCACGAGTTTT+TGG + chr8_4:29785140-29785159 Msa1322640:intron 40.0%
TTAGCGGCATAACAGTTCTA+TGG - chr8_4:29785314-29785333 None:intergenic 40.0%
! TCTATCGGTGCTTTCAATCA+CGG - chr8_4:29785364-29785383 None:intergenic 40.0%
TGTTGATGTTCGTACGAATG+AGG + chr8_4:29785506-29785525 Msa1322640:CDS 40.0%
!! TTGTGGATTAGCTTGTTTGC+TGG - chr8_4:29785535-29785554 None:intergenic 40.0%
! GTACCGGTATTGTACATGTT+TGG - chr8_4:29785576-29785595 None:intergenic 40.0%
!! CAATACCGGTACTTTGAAAC+TGG + chr8_4:29785584-29785603 Msa1322640:CDS 40.0%
!! AGTTTTCAAGAAGCCAGACA+AGG + chr8_4:29785674-29785693 Msa1322640:CDS 40.0%
! TTTTGCAGAAATGCCTTGGT+TGG - chr8_4:29785767-29785786 None:intergenic 40.0%
! GCAAAAATTGCCAGAGGTAT+TGG + chr8_4:29785781-29785800 Msa1322640:CDS 40.0%
! TATGACAGGTACTGCATCAA+GGG - chr8_4:29785898-29785917 None:intergenic 40.0%
CATACACATAGATTCCAAGG+AGG + chr8_4:29785914-29785933 Msa1322640:CDS 40.0%
GGAAGTTCCTCTTAGTGAAT+CGG + chr8_4:29785935-29785954 Msa1322640:CDS 40.0%
!! GTTTCTACCGATTCACTAAG+AGG - chr8_4:29785945-29785964 None:intergenic 40.0%
AGCTTCTGAATCCAAGGAAA+TGG + chr8_4:29786055-29786074 Msa1322640:CDS 40.0%
ACTTTGACACCACAATGCAA+TGG + chr8_4:29786113-29786132 Msa1322640:CDS 40.0%
GGAATTAAGCCATTGCATTG+TGG - chr8_4:29786125-29786144 None:intergenic 40.0%
ATTATTACTCTGCTCCTCCA+TGG + chr8_4:29786159-29786178 Msa1322640:CDS 40.0%
TTCCAACATGGATAAGTCCA+TGG - chr8_4:29786179-29786198 None:intergenic 40.0%
GACTTATCCATGTTGGAATC+CGG + chr8_4:29786181-29786200 Msa1322640:CDS 40.0%
TTATCAGGCTTAAATGCCAC+CGG - chr8_4:29786203-29786222 None:intergenic 40.0%
TACCGATGACACCTTCATAT+TGG + chr8_4:29786261-29786280 Msa1322640:CDS 40.0%
ACCGATGACACCTTCATATT+GGG + chr8_4:29786262-29786281 Msa1322640:CDS 40.0%
ATTGGGGTTGTATGCCAAAT+TGG + chr8_4:29786279-29786298 Msa1322640:CDS 40.0%
TTGGGGTTGTATGCCAAATT+GGG + chr8_4:29786280-29786299 Msa1322640:CDS 40.0%
GGTAATAGGTCACCAACTTT+AGG + chr8_4:29786377-29786396 Msa1322640:CDS 40.0%
CAGAATTAATGATCCGGAAG+AGG + chr8_4:29786469-29786488 Msa1322640:CDS 40.0%
AGGCTGCTAAGAGTTCTATA+TGG + chr8_4:29786489-29786508 Msa1322640:CDS 40.0%
! CGAGAACTTGCATTTGACTT+AGG - chr8_4:29786584-29786603 None:intergenic 40.0%
GTGAATCTGTGAATCTGTGG+TGG - chr8_4:29784333-29784352 None:intergenic 45.0%
TGTGTGGTTGACCGAGTAAT+TGG + chr8_4:29784837-29784856 Msa1322640:intron 45.0%
GTGTGGTTGACCGAGTAATT+GGG + chr8_4:29784838-29784857 Msa1322640:intron 45.0%
ATCTGAGTTCGATTCCTGAG+TGG + chr8_4:29784906-29784925 Msa1322640:intron 45.0%
TCTGAGTTCGATTCCTGAGT+GGG + chr8_4:29784907-29784926 Msa1322640:intron 45.0%
GACCAAGAATTATCCCACTC+AGG - chr8_4:29784923-29784942 None:intergenic 45.0%
GGTCACCAGTTTCAAAGTAC+CGG - chr8_4:29785592-29785611 None:intergenic 45.0%
AAACTATTGCAGCGAGGACA+CGG - chr8_4:29785705-29785724 None:intergenic 45.0%
AGGAATGTTCCTATTGGAGC+CGG + chr8_4:29785822-29785841 Msa1322640:CDS 45.0%
GGAACTTGACAACTCTGCAA+AGG - chr8_4:29785870-29785889 None:intergenic 45.0%
! GTATGACAGGTACTGCATCA+AGG - chr8_4:29785899-29785918 None:intergenic 45.0%
ACTAAGAGGAACTTCCTCCT+TGG - chr8_4:29785931-29785950 None:intergenic 45.0%
TGTGAGAGCTTCTGAATCCA+AGG + chr8_4:29786049-29786068 Msa1322640:CDS 45.0%
CAACATGGATAAGTCCATGG+AGG - chr8_4:29786176-29786195 None:intergenic 45.0%
CTCCATGGACTTATCCATGT+TGG + chr8_4:29786174-29786193 Msa1322640:CDS 45.0%
TTATCCATGTTGGAATCCGG+TGG + chr8_4:29786184-29786203 Msa1322640:CDS 45.0%
TTCAAGTCCTGCAACCATGA+TGG + chr8_4:29786229-29786248 Msa1322640:CDS 45.0%
!! CCCCAATATGAAGGTGTCAT+CGG - chr8_4:29786266-29786285 None:intergenic 45.0%
CCGATGACACCTTCATATTG+GGG + chr8_4:29786263-29786282 Msa1322640:CDS 45.0%
GGCATACAACCCCAATATGA+AGG - chr8_4:29786275-29786294 None:intergenic 45.0%
GGTTGTATGCCAAATTGGGT+TGG + chr8_4:29786284-29786303 Msa1322640:CDS 45.0%
TCCATTTGGCCAACCCAATT+TGG - chr8_4:29786296-29786315 None:intergenic 45.0%
CATTCCATCCCCTTCATCTT+CGG + chr8_4:29786334-29786353 Msa1322640:CDS 45.0%
GTGGTACTTGTTCCGGTAAT+AGG + chr8_4:29786363-29786382 Msa1322640:CDS 45.0%
GTGAATCTGTGAATCTGTGG+TGG - chr8_4:29784333-29784352 None:intergenic 45.0%
TGTGTGGTTGACCGAGTAAT+TGG + chr8_4:29784837-29784856 Msa1322640:intron 45.0%
GTGTGGTTGACCGAGTAATT+GGG + chr8_4:29784838-29784857 Msa1322640:intron 45.0%
ATCTGAGTTCGATTCCTGAG+TGG + chr8_4:29784906-29784925 Msa1322640:intron 45.0%
TCTGAGTTCGATTCCTGAGT+GGG + chr8_4:29784907-29784926 Msa1322640:intron 45.0%
GACCAAGAATTATCCCACTC+AGG - chr8_4:29784923-29784942 None:intergenic 45.0%
GGTCACCAGTTTCAAAGTAC+CGG - chr8_4:29785592-29785611 None:intergenic 45.0%
AAACTATTGCAGCGAGGACA+CGG - chr8_4:29785705-29785724 None:intergenic 45.0%
AGGAATGTTCCTATTGGAGC+CGG + chr8_4:29785822-29785841 Msa1322640:CDS 45.0%
GGAACTTGACAACTCTGCAA+AGG - chr8_4:29785870-29785889 None:intergenic 45.0%
! GTATGACAGGTACTGCATCA+AGG - chr8_4:29785899-29785918 None:intergenic 45.0%
ACTAAGAGGAACTTCCTCCT+TGG - chr8_4:29785931-29785950 None:intergenic 45.0%
TGTGAGAGCTTCTGAATCCA+AGG + chr8_4:29786049-29786068 Msa1322640:CDS 45.0%
CAACATGGATAAGTCCATGG+AGG - chr8_4:29786176-29786195 None:intergenic 45.0%
CTCCATGGACTTATCCATGT+TGG + chr8_4:29786174-29786193 Msa1322640:CDS 45.0%
TTATCCATGTTGGAATCCGG+TGG + chr8_4:29786184-29786203 Msa1322640:CDS 45.0%
TTCAAGTCCTGCAACCATGA+TGG + chr8_4:29786229-29786248 Msa1322640:CDS 45.0%
!! CCCCAATATGAAGGTGTCAT+CGG - chr8_4:29786266-29786285 None:intergenic 45.0%
CCGATGACACCTTCATATTG+GGG + chr8_4:29786263-29786282 Msa1322640:CDS 45.0%
GGCATACAACCCCAATATGA+AGG - chr8_4:29786275-29786294 None:intergenic 45.0%
GGTTGTATGCCAAATTGGGT+TGG + chr8_4:29786284-29786303 Msa1322640:CDS 45.0%
TCCATTTGGCCAACCCAATT+TGG - chr8_4:29786296-29786315 None:intergenic 45.0%
CATTCCATCCCCTTCATCTT+CGG + chr8_4:29786334-29786353 Msa1322640:CDS 45.0%
GTGGTACTTGTTCCGGTAAT+AGG + chr8_4:29786363-29786382 Msa1322640:CDS 45.0%
CGTTCCAGTAATCCGGAGTT+CGG - chr8_4:29784966-29784985 None:intergenic 50.0%
TTACTGGAACGCCTTCCCTT+AGG + chr8_4:29784975-29784994 Msa1322640:intron 50.0%
! ATCCTCTGGTTCCTAAGGGA+AGG - chr8_4:29784989-29785008 None:intergenic 50.0%
!! GTGTGTCGACTGACACAGTT+TGG + chr8_4:29785441-29785460 Msa1322640:intron 50.0%
GTGTCCTCGCTGCAATAGTT+TGG + chr8_4:29785704-29785723 Msa1322640:CDS 50.0%
GTCTCCAAACTATTGCAGCG+AGG - chr8_4:29785711-29785730 None:intergenic 50.0%
GGACAGCTGGTGGAGTAATT+AGG + chr8_4:29785802-29785821 Msa1322640:CDS 50.0%
GGTACTGCATCAAGGGTAAC+AGG - chr8_4:29785891-29785910 None:intergenic 50.0%
GGACTCTTCTGCTGTCAAAG+AGG + chr8_4:29786001-29786020 Msa1322640:CDS 50.0%
AGAAGCTCTCACAGAAGAGC+TGG - chr8_4:29786042-29786061 None:intergenic 50.0%
AATGCCACCGGATTCCAACA+TGG - chr8_4:29786191-29786210 None:intergenic 50.0%
TCTACTGCCATCATGGTTGC+AGG - chr8_4:29786239-29786258 None:intergenic 50.0%
CGGTACTTCTACTGCCATCA+TGG - chr8_4:29786246-29786265 None:intergenic 50.0%
!! GCCAAATTGGGTTGGCCAAA+TGG + chr8_4:29786292-29786311 Msa1322640:CDS 50.0%
ACTGCTAGCCGAAGATGAAG+GGG - chr8_4:29786345-29786364 None:intergenic 50.0%
CACTGCTAGCCGAAGATGAA+GGG - chr8_4:29786346-29786365 None:intergenic 50.0%
GCTAGCAGTGGTACTTGTTC+CGG + chr8_4:29786356-29786375 Msa1322640:CDS 50.0%
GAACTCTTAGCAGCCTCTTC+CGG - chr8_4:29786485-29786504 None:intergenic 50.0%
CACGCTTTCCTGAAAGGATC+CGG - chr8_4:29786660-29786679 None:intergenic 50.0%
CGTTCCAGTAATCCGGAGTT+CGG - chr8_4:29784966-29784985 None:intergenic 50.0%
TTACTGGAACGCCTTCCCTT+AGG + chr8_4:29784975-29784994 Msa1322640:intron 50.0%
! ATCCTCTGGTTCCTAAGGGA+AGG - chr8_4:29784989-29785008 None:intergenic 50.0%
!! GTGTGTCGACTGACACAGTT+TGG + chr8_4:29785441-29785460 Msa1322640:intron 50.0%
GTGTCCTCGCTGCAATAGTT+TGG + chr8_4:29785704-29785723 Msa1322640:CDS 50.0%
GTCTCCAAACTATTGCAGCG+AGG - chr8_4:29785711-29785730 None:intergenic 50.0%
GGACAGCTGGTGGAGTAATT+AGG + chr8_4:29785802-29785821 Msa1322640:CDS 50.0%
GGTACTGCATCAAGGGTAAC+AGG - chr8_4:29785891-29785910 None:intergenic 50.0%
GGACTCTTCTGCTGTCAAAG+AGG + chr8_4:29786001-29786020 Msa1322640:CDS 50.0%
AGAAGCTCTCACAGAAGAGC+TGG - chr8_4:29786042-29786061 None:intergenic 50.0%
AATGCCACCGGATTCCAACA+TGG - chr8_4:29786191-29786210 None:intergenic 50.0%
TCTACTGCCATCATGGTTGC+AGG - chr8_4:29786239-29786258 None:intergenic 50.0%
CGGTACTTCTACTGCCATCA+TGG - chr8_4:29786246-29786265 None:intergenic 50.0%
!! GCCAAATTGGGTTGGCCAAA+TGG + chr8_4:29786292-29786311 Msa1322640:CDS 50.0%
ACTGCTAGCCGAAGATGAAG+GGG - chr8_4:29786345-29786364 None:intergenic 50.0%
CACTGCTAGCCGAAGATGAA+GGG - chr8_4:29786346-29786365 None:intergenic 50.0%
GCTAGCAGTGGTACTTGTTC+CGG + chr8_4:29786356-29786375 Msa1322640:CDS 50.0%
GAACTCTTAGCAGCCTCTTC+CGG - chr8_4:29786485-29786504 None:intergenic 50.0%
CACGCTTTCCTGAAAGGATC+CGG - chr8_4:29786660-29786679 None:intergenic 50.0%
CTTACGTTCTGGCCGAACTC+CGG + chr8_4:29784951-29784970 Msa1322640:intron 55.0%
!! GGGAAGGCGTTCCAGTAATC+CGG - chr8_4:29784973-29784992 None:intergenic 55.0%
!! TGCCAGAGGTATTGGACAGC+TGG + chr8_4:29785789-29785808 Msa1322640:CDS 55.0%
CACCAGCTGTCCAATACCTC+TGG - chr8_4:29785794-29785813 None:intergenic 55.0%
!! CAGAGGTATTGGACAGCTGG+TGG + chr8_4:29785792-29785811 Msa1322640:CDS 55.0%
!! CTACGCTTACCGGCTCCAAT+AGG - chr8_4:29785834-29785853 None:intergenic 55.0%
CTAGCCGAAGATGAAGGGGA+TGG - chr8_4:29786341-29786360 None:intergenic 55.0%
CCACTGCTAGCCGAAGATGA+AGG - chr8_4:29786347-29786366 None:intergenic 55.0%
CCTTCATCTTCGGCTAGCAG+TGG + chr8_4:29786344-29786363 Msa1322640:CDS 55.0%
CTTACGTTCTGGCCGAACTC+CGG + chr8_4:29784951-29784970 Msa1322640:intron 55.0%
!! GGGAAGGCGTTCCAGTAATC+CGG - chr8_4:29784973-29784992 None:intergenic 55.0%
!! TGCCAGAGGTATTGGACAGC+TGG + chr8_4:29785789-29785808 Msa1322640:CDS 55.0%
CACCAGCTGTCCAATACCTC+TGG - chr8_4:29785794-29785813 None:intergenic 55.0%
!! CAGAGGTATTGGACAGCTGG+TGG + chr8_4:29785792-29785811 Msa1322640:CDS 55.0%
!! CTACGCTTACCGGCTCCAAT+AGG - chr8_4:29785834-29785853 None:intergenic 55.0%
CTAGCCGAAGATGAAGGGGA+TGG - chr8_4:29786341-29786360 None:intergenic 55.0%
CCACTGCTAGCCGAAGATGA+AGG - chr8_4:29786347-29786366 None:intergenic 55.0%
CCTTCATCTTCGGCTAGCAG+TGG + chr8_4:29786344-29786363 Msa1322640:CDS 55.0%
CTGGCCGAACTCCGGATTAC+TGG + chr8_4:29784959-29784978 Msa1322640:intron 60.0%
CGCCTTCCCTTAGGAACCAG+AGG + chr8_4:29784984-29785003 Msa1322640:intron 60.0%
GGACACGGCAGAACCTTGTC+TGG - chr8_4:29785690-29785709 None:intergenic 60.0%
CGGAGCGAGAGAAAGCAGCA+GGG - chr8_4:29786640-29786659 None:intergenic 60.0%
!! CCTGCTGCTTTCTCTCGCTC+CGG + chr8_4:29786638-29786657 Msa1322640:CDS 60.0%
CTCTCGCTCCGGATCCTTTC+AGG + chr8_4:29786649-29786668 Msa1322640:CDS 60.0%
CTGGCCGAACTCCGGATTAC+TGG + chr8_4:29784959-29784978 Msa1322640:intron 60.0%
CGCCTTCCCTTAGGAACCAG+AGG + chr8_4:29784984-29785003 Msa1322640:intron 60.0%
GGACACGGCAGAACCTTGTC+TGG - chr8_4:29785690-29785709 None:intergenic 60.0%
CGGAGCGAGAGAAAGCAGCA+GGG - chr8_4:29786640-29786659 None:intergenic 60.0%
!! CCTGCTGCTTTCTCTCGCTC+CGG + chr8_4:29786638-29786657 Msa1322640:CDS 60.0%
CTCTCGCTCCGGATCCTTTC+AGG + chr8_4:29786649-29786668 Msa1322640:CDS 60.0%
CCGGAGCGAGAGAAAGCAGC+AGG - chr8_4:29786641-29786660 None:intergenic 65.0%
CCGGAGCGAGAGAAAGCAGC+AGG - chr8_4:29786641-29786660 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 29784251 29786682 29784251 ID=Msa1322640;Name=Msa1322640
chr8_4 mRNA 29784251 29786682 29784251 ID=Msa1322640-mRNA-1;Parent=Msa1322640;Name=Msa1322640-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0|1|1|1|2|0|444
chr8_4 exon 29784251 29784379 29784251 ID=Msa1322640-mRNA-1:exon:9898;Parent=Msa1322640-mRNA-1
chr8_4 exon 29785477 29786682 29785477 ID=Msa1322640-mRNA-1:exon:9899;Parent=Msa1322640-mRNA-1
chr8_4 CDS 29784251 29784379 29784251 ID=Msa1322640-mRNA-1:cds;Parent=Msa1322640-mRNA-1
chr8_4 CDS 29785477 29786682 29785477 ID=Msa1322640-mRNA-1:cds;Parent=Msa1322640-mRNA-1
Gene Sequence

>Msa1322640

ATGTTCTATATTAAACAAGAACAACAAGAAGAAGATCCTTCAATCAAGCTTTTTGGAAGTGATATTCAAATTCATACTCCCACCACAGATTCACAGATTCACTCTCTTCCACATCAACAATCCATCATGAATGGACTTGAAGAATCAGCTAATGCTGATGTTGATGTTCGTACGAATGAGGTTTCCAGCAAACAAGCTAATCCACAAGAAGATGCTAATACTATTCCAAACATGTACAATACCGGTACTTTGAAACTGGTGACCAAAGCAGTTCATAGAACTAATGAACACAAGACTGCCAAAAGAGATACTGACAATCAAGAGAAAGTTTTCAAGAAGCCAGACAAGGTTCTGCCGTGTCCTCGCTGCAATAGTTTGGAGACAAAGTTTTGCTATTTCAACAATTACAATGTTAACCAACCAAGGCATTTCTGCAAAAATTGCCAGAGGTATTGGACAGCTGGTGGAGTAATTAGGAATGTTCCTATTGGAGCCGGTAAGCGTAGAAATAAGCAATCGCCTTTGCAGAGTTGTCAAGTTCCTGTTACCCTTGATGCAGTACCTGTCATACACATAGATTCCAAGGAGGAAGTTCCTCTTAGTGAATCGGTAGAAACTGTGTTAAATCTCAAGGGCCATAGAAAAATTGAAACGGACTCTTCTGCTGTCAAAGAGGAAATTGAGAACTCTTCCAGCTCTTCTGTGAGAGCTTCTGAATCCAAGGAAATGGAGTATTCTGAAAGTGGAATAGAGCATATTGGTTTGACTTTGACACCACAATGCAATGGCTTAATTCCTTTACATTCACTTCATTATTACTCTGCTCCTCCATGGACTTATCCATGTTGGAATCCGGTGGCATTTAAGCCTGATAACATAACTTCAAGTCCTGCAACCATGATGGCAGTAGAAGTACCGATGACACCTTCATATTGGGGTTGTATGCCAAATTGGGTTGGCCAAATGGAAGAATTATCGTTAGTCGGCATTCCATCCCCTTCATCTTCGGCTAGCAGTGGTACTTGTTCCGGTAATAGGTCACCAACTTTAGGGAAACATTGTAGAGATGGAAGTACACAAGAAGATACAGTGAAGCAGAATATTTGGGTTCCTAAAACTATCAGAATTAATGATCCGGAAGAGGCTGCTAAGAGTTCTATATGGTCAACTTTGAGAACGAAATCTGAACAGAACAAACCTATTATGAAAGGAAGTGTTTTTAAATCATTTGAACCTAAGTCAAATGCAAGTTCTCGTGATTTAGACGATAATCAAATTCTACGAGCAAACCCTGCTGCTTTCTCTCGCTCCGGATCCTTTCAGGAAAGCGTGTAA
Protein sequence

>Msa1322640

MFYIKQEQQEEDPSIKLFGSDIQIHTPTTDSQIHSLPHQQSIMNGLEESANADVDVRTNEVSSKQANPQEDANTIPNMYNTGTLKLVTKAVHRTNEHKTAKRDTDNQEKVFKKPDKVLPCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGVIRNVPIGAGKRRNKQSPLQSCQVPVTLDAVPVIHIDSKEEVPLSESVETVLNLKGHRKIETDSSAVKEEIENSSSSSVRASESKEMEYSESGIEHIGLTLTPQCNGLIPLHSLHYYSAPPWTYPCWNPVAFKPDNITSSPATMMAVEVPMTPSYWGCMPNWVGQMEELSLVGIPSPSSSASSGTCSGNRSPTLGKHCRDGSTQEDTVKQNIWVPKTIRINDPEEAAKSSIWSTLRTKSEQNKPIMKGSVFKSFEPKSNASSRDLDDNQILRANPAAFSRSGSFQESV*