AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1323090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1323090 MtrunA17_Chr8g0354821 96.939 686 21 0 12 697 3 688 0.0 1395
Msa1323090 MtrunA17_Chr3g0080761 60.116 687 233 8 13 696 15 663 0.0 847
Msa1323090 MtrunA17_Chr7g0255181 45.604 728 334 13 5 696 3 704 0.0 613
Msa1323090 MtrunA17_Chr5g0399801 40.000 585 317 14 130 696 520 1088 1.92e-126 402
Msa1323090 MtrunA17_Chr4g0003501 40.458 524 286 12 176 694 450 952 3.29e-117 374
Msa1323090 MtrunA17_Chr4g0003511 38.850 574 316 14 131 694 501 1049 4.47e-114 368
Msa1323090 MtrunA17_Chr8g0368901 41.556 450 245 12 229 668 317 758 1.37e-105 338
Msa1323090 MtrunA17_Chr1g0163051 39.960 503 279 14 176 668 158 647 7.46e-105 333
Msa1323090 MtrunA17_Chr8g0368911 40.089 449 251 10 229 667 310 750 1.54e-103 333
Msa1323090 MtrunA17_Chr8g0369301 39.741 463 251 9 221 668 289 738 8.14e-103 331
Msa1323090 MtrunA17_Chr6g0467381 35.791 556 304 17 145 667 29 564 2.49e-93 300
Msa1323090 MtrunA17_Chr1g0163041 36.822 516 286 16 176 668 68 566 2.51e-92 298
Msa1323090 MtrunA17_Chr6g0467421 35.791 556 304 17 145 667 29 564 2.66e-92 298
Msa1323090 MtrunA17_Chr6g0467401 35.612 556 305 17 145 667 29 564 1.58e-91 296
Msa1323090 MtrunA17_Chr6g0467531 36.571 525 280 17 176 667 60 564 3.75e-90 292
Msa1323090 MtrunA17_Chr6g0476111 35.490 510 290 13 209 693 195 690 8.68e-89 292
Msa1323090 MtrunA17_Chr3g0094881 36.207 522 290 16 173 666 116 622 9.06e-86 283
Msa1323090 MtrunA17_Chr6g0476121 34.510 510 295 13 209 693 144 639 5.67e-85 281
Msa1323090 MtrunA17_Chr7g0252211 34.442 511 295 13 209 693 257 753 9.55e-85 283
Msa1323090 MtrunA17_Chr6g0467411 33.678 484 274 16 195 667 35 482 1.01e-70 238
Msa1323090 MtrunA17_Chr1g0170651 33.952 539 294 12 176 694 47 543 3.33e-69 236
Msa1323090 MtrunA17_Chr2g0306961 32.943 513 265 15 176 667 9 463 7.04e-69 233
Msa1323090 MtrunA17_Chr7g0232811 30.380 553 275 22 165 692 67 534 2.39e-60 211
Msa1323090 MtrunA17_Chr7g0232841 29.603 554 264 23 165 692 70 523 1.15e-52 190
Msa1323090 MtrunA17_Chr7g0232981 29.795 537 276 19 165 692 67 511 3.03e-52 189
Msa1323090 MtrunA17_Chr1g0190311 28.743 334 170 8 410 693 325 640 5.85e-34 138
Msa1323090 MtrunA17_Chr5g0403241 31.532 333 161 12 401 694 1200 1504 3.31e-30 128
Msa1323090 MtrunA17_Chr7g0262001 28.739 341 174 10 404 695 380 700 2.76e-29 124
Msa1323090 MtrunA17_Chr1g0183321 28.274 336 172 9 410 695 428 744 8.95e-29 122
Msa1323090 MtrunA17_Chr8g0373821 30.368 326 172 11 395 692 235 533 1.15e-27 117
Msa1323090 MtrunA17_Chr4g0075321 34.419 215 118 5 481 694 869 1061 1.46e-27 119
Msa1323090 MtrunA17_Chr1g0201621 31.401 207 92 6 498 697 61 224 4.78e-21 97.1
Msa1323090 MtrunA17_Chr1g0201311 31.401 207 92 6 498 697 61 224 5.37e-21 97.1
Msa1323090 MtrunA17_Chr2g0305371 30.374 214 108 6 484 697 300 472 4.25e-16 81.6
Msa1323090 MtrunA17_Chr6g0477001 27.094 203 110 5 495 697 87 251 3.92e-14 74.3
Msa1323090 MtrunA17_Chr7g0232751 40.000 85 46 2 610 692 33 114 2.32e-13 67.4
Msa1323090 MtrunA17_Chr2g0297191 28.977 176 87 5 519 694 1031 1168 1.22e-12 71.6
Msa1323090 MtrunA17_Chr7g0232871 42.623 61 33 1 513 573 16 74 1.22e-11 62.0
Msa1323090 MtrunA17_Chr7g0232761 30.653 199 109 9 172 364 91 266 2.21e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1323090 AT1G73100.1 49.422 692 304 12 14 697 16 669 0.0 655
Msa1323090 AT5G04940.2 47.361 701 311 10 15 697 10 670 0.0 650
Msa1323090 AT5G04940.1 47.361 701 311 10 15 697 10 670 0.0 650
Msa1323090 AT1G17770.1 39.888 717 372 19 14 696 1 692 3.90e-154 463
Msa1323090 AT2G24740.1 46.211 541 235 13 171 697 257 755 7.61e-147 446
Msa1323090 AT2G35160.5 39.591 538 271 16 168 694 261 755 3.95e-109 348
Msa1323090 AT2G35160.2 39.591 538 271 16 168 694 297 791 5.27e-109 348
Msa1323090 AT2G35160.3 39.591 538 271 16 168 694 297 791 5.27e-109 348
Msa1323090 AT2G35160.1 39.591 538 271 16 168 694 297 791 5.27e-109 348
Msa1323090 AT2G35160.4 39.591 538 271 16 168 694 297 791 5.27e-109 348
Msa1323090 AT4G13460.1 38.142 506 289 12 176 668 145 639 2.97e-107 340
Msa1323090 AT4G13460.2 38.142 506 289 12 176 668 145 639 2.97e-107 340
Msa1323090 AT2G22740.2 38.302 530 302 12 176 693 270 786 2.53e-106 341
Msa1323090 AT2G22740.1 38.302 530 302 12 176 693 270 786 2.53e-106 341
Msa1323090 AT2G33290.1 37.376 503 294 11 176 668 149 640 1.65e-101 325
Msa1323090 AT2G33290.3 37.376 503 294 11 176 668 149 640 1.65e-101 325
Msa1323090 AT2G33290.4 37.376 503 294 11 176 668 149 640 1.65e-101 325
Msa1323090 AT2G33290.2 37.376 503 294 11 176 668 149 640 1.65e-101 325
Msa1323090 AT5G13960.2 35.185 486 284 12 229 693 11 486 1.03e-84 276
Msa1323090 AT5G13960.1 34.646 508 299 13 208 693 124 620 1.48e-84 279
Msa1323090 AT5G47150.1 41.509 212 117 4 176 385 118 324 8.69e-44 160
Msa1323090 AT2G05900.1 42.857 196 108 3 250 443 1 194 6.12e-42 155
Msa1323090 AT2G05900.1 51.163 86 33 1 612 697 236 312 1.30e-21 96.7
Msa1323090 AT3G04380.3 28.060 335 170 8 410 693 128 442 4.42e-37 145
Msa1323090 AT3G04380.2 28.060 335 170 8 410 693 117 431 4.64e-37 145
Msa1323090 AT3G04380.5 28.060 335 170 8 410 693 101 415 5.82e-37 144
Msa1323090 AT3G04380.1 28.060 335 170 8 410 693 144 458 6.23e-37 145
Msa1323090 AT3G04380.6 28.060 335 170 8 410 693 117 431 7.26e-37 144
Msa1323090 AT3G04380.4 28.060 335 170 8 410 693 144 458 8.55e-37 145
Msa1323090 AT5G47160.1 41.410 227 122 6 159 381 188 407 6.76e-35 137
Msa1323090 AT5G47160.3 41.410 227 122 6 159 381 188 407 6.76e-35 137
Msa1323090 AT5G47160.2 41.410 227 122 6 159 381 188 407 6.76e-35 137
Msa1323090 AT1G04050.3 28.382 377 183 11 369 693 274 615 2.55e-30 127
Msa1323090 AT1G04050.2 28.912 377 181 12 369 693 378 719 4.24e-30 127
Msa1323090 AT1G04050.1 28.912 377 181 12 369 693 378 719 4.24e-30 127
Msa1323090 AT2G23740.3 30.818 318 168 12 407 696 1088 1381 2.25e-29 125
Msa1323090 AT2G23740.6 30.818 318 168 12 407 696 1088 1381 2.25e-29 125
Msa1323090 AT2G23740.2 30.818 318 168 12 407 696 1088 1381 2.25e-29 125
Msa1323090 AT2G23740.1 30.818 318 168 12 407 696 1081 1374 2.30e-29 125
Msa1323090 AT5G43990.16 26.849 365 181 11 379 693 354 682 4.36e-29 124
Msa1323090 AT5G43990.5 26.849 365 181 11 379 693 354 682 4.36e-29 124
Msa1323090 AT5G43990.17 26.849 365 181 11 379 693 354 682 4.36e-29 124
Msa1323090 AT5G43990.14 26.849 365 181 11 379 693 354 682 4.36e-29 124
Msa1323090 AT5G43990.3 26.429 420 209 14 324 693 333 702 5.04e-29 124
Msa1323090 AT5G43990.11 26.429 420 209 14 324 693 333 702 5.04e-29 124
Msa1323090 AT5G43990.1 26.429 420 209 14 324 693 333 702 5.04e-29 124
Msa1323090 AT5G43990.4 26.429 420 209 14 324 693 333 702 5.04e-29 124
Msa1323090 AT5G43990.15 26.429 420 209 14 324 693 336 705 5.71e-29 123
Msa1323090 AT5G43990.10 26.429 420 209 14 324 693 336 705 5.71e-29 123
Msa1323090 AT5G43990.7 26.849 365 181 11 379 693 285 613 5.73e-29 123
Msa1323090 AT5G43990.9 26.429 420 209 14 324 693 356 725 5.93e-29 123
Msa1323090 AT5G43990.2 26.429 420 209 14 324 693 356 725 5.93e-29 123
Msa1323090 AT5G43990.8 26.849 365 181 11 379 693 305 633 8.47e-29 122
Msa1323090 AT5G43990.12 26.849 365 181 11 379 693 305 633 8.47e-29 122
Msa1323090 AT5G43990.6 26.849 365 181 11 379 693 305 633 8.47e-29 122
Msa1323090 AT5G43990.13 26.849 365 181 11 379 693 305 633 8.47e-29 122
Msa1323090 AT2G23740.4 31.301 246 122 11 407 624 1088 1314 5.73e-20 95.9
Msa1323090 AT2G23740.5 31.301 246 122 11 407 624 1088 1314 5.73e-20 95.9
Msa1323090 AT3G03750.2 30.396 227 131 8 471 694 145 347 5.99e-19 89.7
Msa1323090 AT4G30860.1 28.643 199 102 5 499 697 307 465 2.58e-14 76.6
Msa1323090 AT3G03750.1 27.556 225 124 8 471 694 145 331 2.41e-13 72.4
Msa1323090 AT3G59960.3 28.333 180 87 6 520 697 111 250 6.65e-11 64.3
Msa1323090 AT3G59960.2 28.333 180 87 6 520 697 111 250 6.65e-11 64.3
Msa1323090 AT3G59960.4 28.333 180 87 6 520 697 111 250 6.65e-11 64.3

Find 158 sgRNAs with CRISPR-Local

Find 374 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAACTCTTGTAGACCCTTAT+TGG 0.198500 8_4:-31038888 None:intergenic
TGCTTATGCTGCTTGGAAAT+TGG 0.240702 8_4:+31039754 Msa1323090:CDS
CTCTTTCAATCCAAGAATCT+TGG 0.247325 8_4:-31039673 None:intergenic
GCACTAGACCAAAAGGTTTC+GGG 0.260116 8_4:-31039928 None:intergenic
AGCTATATTTCCCACATTCT+TGG 0.262990 8_4:-31040428 None:intergenic
AACACGGATTGAACATGTTT+TGG 0.288137 8_4:-31038690 None:intergenic
TGCACTAGACCAAAAGGTTT+CGG 0.303413 8_4:-31039929 None:intergenic
TGGTGCCTGGGATTGAGATT+GGG 0.314399 8_4:+31039294 Msa1323090:CDS
GTGGTGCCTGGGATTGAGAT+TGG 0.321695 8_4:+31039293 Msa1323090:CDS
TTCTTGGCACTTATAATTAG+AGG 0.323045 8_4:-31040412 None:intergenic
TGGAGATAGCGACGATTATT+CGG 0.330458 8_4:+31038941 Msa1323090:CDS
GATTATTCGGAAGGGTTTGT+AGG 0.338716 8_4:+31038954 Msa1323090:CDS
CCATTGGAGGAATATGTCTA+AGG 0.339713 8_4:-31040546 None:intergenic
TCGGCTACTTTGACATCAAC+AGG 0.342895 8_4:-31038801 None:intergenic
ATTGCAAAGAGTTTCTTAAA+AGG 0.342943 8_4:+31039012 Msa1323090:CDS
TATATAAAATCCAAGATTCT+TGG 0.344747 8_4:+31039663 Msa1323090:CDS
GCAGAGTTAACATATGATTA+TGG 0.349411 8_4:+31040568 Msa1323090:CDS
AGAAGAGCGGGCGTGGTGCC+TGG 0.355977 8_4:+31039281 Msa1323090:CDS
GCAAAGTGCCGTGGTTTCTT+TGG 0.357611 8_4:+31040661 Msa1323090:CDS
GAATTATGAACCTAGCTTAC+TGG 0.368503 8_4:+31040342 Msa1323090:CDS
CTGCCAAAGTGACTCCAATA+AGG 0.374599 8_4:+31038874 Msa1323090:CDS
CAGAACAAAGGGTAGAGGTT+GGG 0.385564 8_4:+31040168 Msa1323090:CDS
TTCTTGCTGACCTCTCCAAT+GGG 0.387936 8_4:+31039819 Msa1323090:CDS
ACTTGAATGGTTCATAAATA+CGG 0.393021 8_4:-31040318 None:intergenic
TCAAAGAGGTAATCTTGCTT+TGG 0.393398 8_4:+31039547 Msa1323090:CDS
GAGTATCAAGGATGGATCTA+AGG 0.393584 8_4:+31039391 Msa1323090:CDS
GGAGTCACTTTGGCAGCAAC+AGG 0.394355 8_4:-31038867 None:intergenic
AGAATACTATTTGCAGTATA+CGG 0.394436 8_4:-31040037 None:intergenic
CTTTCGGAAGAGGAATTTGA+TGG 0.395049 8_4:-31038764 None:intergenic
GGTTCATAATTCCACTTGAA+TGG 0.395912 8_4:-31040331 None:intergenic
ACATCATTGACAAGTGATAC+TGG 0.398710 8_4:-31039854 None:intergenic
TGGATTGAAAGAGGGAAATC+TGG 0.399448 8_4:+31039683 Msa1323090:CDS
GTTGTTTCGTCAGGTGTATA+CGG 0.404570 8_4:+31039434 Msa1323090:CDS
AGTAATGCTTTGACTTGTAA+AGG 0.409168 8_4:+31039239 Msa1323090:CDS
GCGTTAAGCGTTGTTTCGTC+AGG 0.419354 8_4:+31039425 Msa1323090:CDS
AGAACAAAGGGTAGAGGTTG+GGG 0.428660 8_4:+31040169 Msa1323090:CDS
ATTCTTGCTGACCTCTCCAA+TGG 0.429575 8_4:+31039818 Msa1323090:CDS
CACTAAAAGATGATGGTGAT+AGG 0.431343 8_4:+31039099 Msa1323090:CDS
GTAATGCTTTGACTTGTAAA+GGG 0.433132 8_4:+31039240 Msa1323090:CDS
GGGGTTTCCTCAGCTTCTTT+CGG 0.441186 8_4:-31038780 None:intergenic
TCCTCAGCTTCTTTCGGAAG+AGG 0.444901 8_4:-31038774 None:intergenic
CGAATGGAAATGTGTCTTGT+GGG 0.460019 8_4:+31039332 Msa1323090:CDS
CAAGATTCTTGGATTGAAAG+AGG 0.462943 8_4:+31039674 Msa1323090:CDS
GCATTTCTTTCTCCTTCTAA+AGG 0.463277 8_4:-31040626 None:intergenic
GGGTTTGCATGCTCAATCAA+TGG 0.467421 8_4:+31039352 Msa1323090:CDS
GGTTTGACAAATGAGTAAAA+TGG 0.474364 8_4:-31038741 None:intergenic
ATTACCCATGCTGGTCATGC+TGG 0.474621 8_4:+31040592 Msa1323090:CDS
TTTCTGGTGGATACCCATCT+GGG 0.476462 8_4:+31038712 Msa1323090:CDS
AACAGGTGCTAAACTACGTA+AGG 0.476974 8_4:-31038664 None:intergenic
CTTACATCTTCCAGTAAGCT+AGG 0.477855 8_4:-31040352 None:intergenic
TTACAATTGCAGCTTAAAGA+AGG 0.477858 8_4:-31039953 None:intergenic
TGCCAAAGTGACTCCAATAA+GGG 0.477984 8_4:+31038875 Msa1323090:CDS
CACGAGGAGAAGAGCGGGCG+TGG 0.478218 8_4:+31039274 Msa1323090:CDS
ATAAAAGTACCAGCACGTAT+AGG 0.483482 8_4:-31040208 None:intergenic
GAAGAGCGGGCGTGGTGCCT+GGG 0.483938 8_4:+31039282 Msa1323090:CDS
TATTTAAGTATAAGTTGGTA+AGG 0.490370 8_4:+31039714 Msa1323090:CDS
CATGAACAGTTCAAATCACC+TGG 0.499372 8_4:-31039989 None:intergenic
GAGGTAGCAGTGCCTTTAGA+AGG 0.502063 8_4:+31040614 Msa1323090:CDS
AAAACTCGCGAGCCGGTTGT+TGG 0.502511 8_4:+31039044 Msa1323090:CDS
ACCTCCAGCATGACCAGCAT+GGG 0.504841 8_4:-31040596 None:intergenic
GACCCTTATTGGAGTCACTT+TGG 0.504947 8_4:-31038877 None:intergenic
TTCATGCATTCAAAGAAATG+AGG 0.505419 8_4:+31040006 Msa1323090:CDS
GCACTTATAATTAGAGGAGA+TGG 0.508609 8_4:-31040406 None:intergenic
GAAATGAATCAACAAGGCTA+TGG 0.511296 8_4:+31038921 Msa1323090:CDS
GAAGGCTGCACTAGACCAAA+AGG 0.511466 8_4:-31039935 None:intergenic
TGGTATATTTAAGTATAAGT+TGG 0.512381 8_4:+31039709 Msa1323090:CDS
TTCAACATTCTGATATACCT+TGG 0.513102 8_4:-31040263 None:intergenic
CTTGGAAATTGGCTCAAAAG+TGG 0.515222 8_4:+31039765 Msa1323090:CDS
AAGGTATATCAGAATGTTGA+AGG 0.517616 8_4:+31040265 Msa1323090:CDS
TGGAATACTTTCAACCCCAT+TGG 0.517944 8_4:-31039834 None:intergenic
TCATATGTTAACTCTGCCAT+TGG 0.520039 8_4:-31040562 None:intergenic
ATGGAAGTGTTCAGAACAAA+GGG 0.520947 8_4:+31040157 Msa1323090:CDS
TATGTTAACTCTGCCATTGG+AGG 0.521537 8_4:-31040559 None:intergenic
AATAAAACCATTCCTTGTAC+AGG 0.521861 8_4:-31039798 None:intergenic
GAAGAACAAAACTCGCGAGC+CGG 0.522460 8_4:+31039037 Msa1323090:CDS
TATAAGTTGGTAAGGTTACC+TGG 0.522467 8_4:+31039722 Msa1323090:CDS
GAACTCGTACCACCAACAAC+CGG 0.528217 8_4:-31039056 None:intergenic
GGAAGGCAGGTTCCTGTACA+AGG 0.528660 8_4:+31039786 Msa1323090:CDS
TGATAAACGAAAGCGTAGTA+CGG 0.532272 8_4:+31038977 Msa1323090:CDS
TGTAACACAGCATGTGTCCC+AGG 0.534817 8_4:+31039971 Msa1323090:CDS
GCAGGTTCCTGTACAAGGAA+TGG 0.539532 8_4:+31039791 Msa1323090:CDS
AATTATAAGTGCCAAGAATG+TGG 0.540601 8_4:+31040417 Msa1323090:CDS
TCGAATGGAAATGTGTCTTG+TGG 0.542415 8_4:+31039331 Msa1323090:CDS
TTGGCTCAAAAGTGGAAGGC+AGG 0.546449 8_4:+31039773 Msa1323090:CDS
CCTTAGACATATTCCTCCAA+TGG 0.547540 8_4:+31040546 Msa1323090:CDS
GGTTTGCATGCTCAATCAAT+GGG 0.548358 8_4:+31039353 Msa1323090:CDS
ACTAAAAGATGATGGTGATA+GGG 0.551648 8_4:+31039100 Msa1323090:CDS
CAAATAGTATTCTAGTGAGT+CGG 0.552747 8_4:+31040047 Msa1323090:CDS
AAGATTCTTGGATTGAAAGA+GGG 0.554674 8_4:+31039675 Msa1323090:CDS
ACTCGCGAGCCGGTTGTTGG+TGG 0.555816 8_4:+31039047 Msa1323090:CDS
TCAGAACAAAGGGTAGAGGT+TGG 0.558625 8_4:+31040167 Msa1323090:CDS
TTTCGGAAGAGGAATTTGAT+GGG 0.558690 8_4:-31038763 None:intergenic
GGTGCCTGGGATTGAGATTG+GGG 0.558794 8_4:+31039295 Msa1323090:CDS
GATTATGGAATTACCCATGC+TGG 0.562248 8_4:+31040583 Msa1323090:CDS
AACCCGACACTAAAAGATGA+TGG 0.564385 8_4:+31039092 Msa1323090:CDS
GTAGGAAAACACCGACACAT+AGG 0.564832 8_4:-31040094 None:intergenic
ACATCCCCAATCTCAATCCC+AGG 0.570470 8_4:-31039299 None:intergenic
TACCTCCAGCATGACCAGCA+TGG 0.572482 8_4:-31040597 None:intergenic
TAGGAAAACACCGACACATA+GGG 0.573999 8_4:-31040093 None:intergenic
GATAGCGACGATTATTCGGA+AGG 0.574436 8_4:+31038945 Msa1323090:CDS
TAAAATGGAGGAAACCCAGA+TGG 0.574940 8_4:-31038726 None:intergenic
GATGAAGTTAGAGTCATTCG+AGG 0.576279 8_4:+31039590 Msa1323090:CDS
ATTATAAGTGCCAAGAATGT+GGG 0.579471 8_4:+31040418 Msa1323090:CDS
GTGTTCAGAACAAAGGGTAG+AGG 0.581999 8_4:+31040163 Msa1323090:CDS
TGACGTTTGATTCAATTCGA+AGG 0.582508 8_4:+31039144 Msa1323090:CDS
TACTTTCAACCCCATTGGAG+AGG 0.582710 8_4:-31039829 None:intergenic
AAGCCGCTTATTCATGAATG+TGG 0.582827 8_4:+31040070 Msa1323090:CDS
TTGACAAATGAGTAAAATGG+AGG 0.583789 8_4:-31038738 None:intergenic
GTTCCTTCGACTCTTCAAGT+TGG 0.586309 8_4:-31039175 None:intergenic
TCCTCTTCCGAAAGAAGCTG+AGG 0.587764 8_4:+31038773 Msa1323090:CDS
CGGCTACTTTGACATCAACA+GGG 0.587818 8_4:-31038800 None:intergenic
ACACTGGATCCTATACGTGC+TGG 0.589618 8_4:+31040199 Msa1323090:CDS
GGTGGTACGAGTTCTTATGT+TGG 0.589976 8_4:+31039065 Msa1323090:CDS
CATTGGAGGAATATGTCTAA+GGG 0.591612 8_4:-31040545 None:intergenic
AATTGATTATATGAGTATCA+AGG 0.594679 8_4:+31039379 Msa1323090:CDS
CATGGAAGTGTTCAGAACAA+AGG 0.594814 8_4:+31040156 Msa1323090:CDS
CAATGATGTCGATGATGAGA+AGG 0.596174 8_4:+31039868 Msa1323090:CDS
GACTGGTTTAAAACAACACA+TGG 0.599479 8_4:+31040138 Msa1323090:CDS
AGAAGTTATTAACAGAGCCA+AGG 0.601057 8_4:+31040246 Msa1323090:CDS
TCATGCATTCAAAGAAATGA+GGG 0.603338 8_4:+31040007 Msa1323090:CDS
CGTTTGATTCAATTCGAAGG+AGG 0.603429 8_4:+31039147 Msa1323090:CDS
ACTAACACGAGGAGAAGAGC+GGG 0.604705 8_4:+31039269 Msa1323090:CDS
GTATTTATGAACCATTCAAG+TGG 0.607961 8_4:+31040320 Msa1323090:CDS
GAAATTGGCTCAAAAGTGGA+AGG 0.609566 8_4:+31039769 Msa1323090:CDS
AGGAGAAAGAAATGCTTGTG+TGG 0.611149 8_4:+31040634 Msa1323090:CDS
GAACAAAGGGTAGAGGTTGG+GGG 0.611366 8_4:+31040170 Msa1323090:CDS
GATTATATGAGTATCAAGGA+TGG 0.613333 8_4:+31039383 Msa1323090:CDS
TTCGGAAGAGGAATTTGATG+GGG 0.613859 8_4:-31038762 None:intergenic
AACTAACACGAGGAGAAGAG+CGG 0.618441 8_4:+31039268 Msa1323090:CDS
ATAGCGACGATTATTCGGAA+GGG 0.618833 8_4:+31038946 Msa1323090:CDS
GGAGAAAGAAATGCTTGTGT+GGG 0.619249 8_4:+31040635 Msa1323090:CDS
ATGCCAACTTGAAGAGTCGA+AGG 0.621780 8_4:+31039172 Msa1323090:CDS
ACCCATGCTGGTCATGCTGG+AGG 0.621845 8_4:+31040595 Msa1323090:CDS
TCTTGCTGACCTCTCCAATG+GGG 0.629627 8_4:+31039820 Msa1323090:CDS
GAAAGAGGGAAATCTGGCGG+TGG 0.632493 8_4:+31039689 Msa1323090:CDS
AAGTTCAAATGTATGTAGTG+AGG 0.636973 8_4:+31040372 Msa1323090:CDS
TGGGTATCCACCAGAAAACA+CGG 0.640101 8_4:-31038706 None:intergenic
AAAATGGAGGAAACCCAGAT+GGG 0.640580 8_4:-31038725 None:intergenic
GGGCCACATTCATGAATAAG+CGG 0.645886 8_4:-31040073 None:intergenic
TTGGCAGCCAGTCTTATATG+CGG 0.646377 8_4:+31040486 Msa1323090:CDS
TATCAAGGATGGATCTAAGG+AGG 0.648003 8_4:+31039394 Msa1323090:CDS
TGCACTTGCTATCAAGCGTG+CGG 0.648738 8_4:+31039205 Msa1323090:CDS
ACTGATCAGAAGCTTCAAAG+AGG 0.649359 8_4:+31039533 Msa1323090:CDS
TTGCATGCTCAATCAATGGG+TGG 0.651570 8_4:+31039356 Msa1323090:CDS
ACAGGTGCTAAACTACGTAA+GGG 0.655052 8_4:-31038663 None:intergenic
GGCTACTTTGACATCAACAG+GGG 0.664370 8_4:-31038799 None:intergenic
TGTGGGTCAGCAAAGTGCCG+TGG 0.671789 8_4:+31040652 Msa1323090:CDS
ATGAATGTGGCCCTATGTGT+CGG 0.674340 8_4:+31040083 Msa1323090:CDS
CAAAGTAGCCGAGAAAACGC+CGG 0.676869 8_4:+31038812 Msa1323090:CDS
TGGATCTAAGGAGGATACTG+TGG 0.679943 8_4:+31039403 Msa1323090:CDS
AATGATGTCGATGATGAGAA+GGG 0.683211 8_4:+31039869 Msa1323090:CDS
TGTATACGGTGATGATACAG+AGG 0.684181 8_4:+31039448 Msa1323090:CDS
ATTGTTAACCAAAGAAACCA+CGG 0.691606 8_4:-31040669 None:intergenic
GATGAAGAAATGAATCAACA+AGG 0.704808 8_4:+31038915 Msa1323090:CDS
ATTGAAAGAGGGAAATCTGG+CGG 0.710427 8_4:+31039686 Msa1323090:CDS
ATGAACAGTTCAAATCACCT+GGG 0.723585 8_4:-31039988 None:intergenic
AAGGGTTTAAAACTAACACG+AGG 0.770459 8_4:+31039258 Msa1323090:CDS
CTTTGGACAGAAGTGCACAG+CGG 0.772147 8_4:+31039564 Msa1323090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAATGTTTTAATTTATAG+TGG + chr8_4:31039473-31039492 Msa1323090:CDS 10.0%
!!! AATAATGTTTTAATTTATAG+TGG + chr8_4:31039473-31039492 Msa1323090:CDS 10.0%
!! AATTGATTATATGAGTATCA+AGG + chr8_4:31039379-31039398 Msa1323090:CDS 20.0%
!! TCAAAAATCTATATGTATGA+TGG + chr8_4:31039638-31039657 Msa1323090:CDS 20.0%
!! TATATAAAATCCAAGATTCT+TGG + chr8_4:31039663-31039682 Msa1323090:CDS 20.0%
!! TGGTATATTTAAGTATAAGT+TGG + chr8_4:31039709-31039728 Msa1323090:CDS 20.0%
!!! TATTTAAGTATAAGTTGGTA+AGG + chr8_4:31039714-31039733 Msa1323090:CDS 20.0%
!! AATTGATTATATGAGTATCA+AGG + chr8_4:31039379-31039398 Msa1323090:CDS 20.0%
!! TCAAAAATCTATATGTATGA+TGG + chr8_4:31039638-31039657 Msa1323090:CDS 20.0%
!! TATATAAAATCCAAGATTCT+TGG + chr8_4:31039663-31039682 Msa1323090:CDS 20.0%
!! TGGTATATTTAAGTATAAGT+TGG + chr8_4:31039709-31039728 Msa1323090:CDS 20.0%
!!! TATTTAAGTATAAGTTGGTA+AGG + chr8_4:31039714-31039733 Msa1323090:CDS 20.0%
! ATTGCAAAGAGTTTCTTAAA+AGG + chr8_4:31039012-31039031 Msa1323090:CDS 25.0%
!!! TGTTTTAATTTATAGTGGTC+AGG + chr8_4:31039478-31039497 Msa1323090:CDS 25.0%
!!! GTTTTAATTTATAGTGGTCA+GGG + chr8_4:31039479-31039498 Msa1323090:CDS 25.0%
!! ATTTTTGAACTTCTATTCAC+AGG - chr8_4:31039626-31039645 None:intergenic 25.0%
! AGAATACTATTTGCAGTATA+CGG - chr8_4:31040040-31040059 None:intergenic 25.0%
! ACTTGAATGGTTCATAAATA+CGG - chr8_4:31040321-31040340 None:intergenic 25.0%
! AAAAAATGCAATGTGGATAA+AGG - chr8_4:31040524-31040543 None:intergenic 25.0%
! ATTGCAAAGAGTTTCTTAAA+AGG + chr8_4:31039012-31039031 Msa1323090:CDS 25.0%
!!! TGTTTTAATTTATAGTGGTC+AGG + chr8_4:31039478-31039497 Msa1323090:CDS 25.0%
!!! GTTTTAATTTATAGTGGTCA+GGG + chr8_4:31039479-31039498 Msa1323090:CDS 25.0%
!! ATTTTTGAACTTCTATTCAC+AGG - chr8_4:31039626-31039645 None:intergenic 25.0%
! AGAATACTATTTGCAGTATA+CGG - chr8_4:31040040-31040059 None:intergenic 25.0%
! ACTTGAATGGTTCATAAATA+CGG - chr8_4:31040321-31040340 None:intergenic 25.0%
! AAAAAATGCAATGTGGATAA+AGG - chr8_4:31040524-31040543 None:intergenic 25.0%
!!! TGAACATGTTTTGGTAAAAC+AGG - chr8_4:31038684-31038703 None:intergenic 30.0%
TTGACAAATGAGTAAAATGG+AGG - chr8_4:31038741-31038760 None:intergenic 30.0%
GGTTTGACAAATGAGTAAAA+TGG - chr8_4:31038744-31038763 None:intergenic 30.0%
GATGAAGAAATGAATCAACA+AGG + chr8_4:31038915-31038934 Msa1323090:CDS 30.0%
! ACTAAAAGATGATGGTGATA+GGG + chr8_4:31039100-31039119 Msa1323090:CDS 30.0%
!! AGTAATGCTTTGACTTGTAA+AGG + chr8_4:31039239-31039258 Msa1323090:CDS 30.0%
!! GTAATGCTTTGACTTGTAAA+GGG + chr8_4:31039240-31039259 Msa1323090:CDS 30.0%
!!! GGATGTTTTCTTTTTTCGAA+TGG + chr8_4:31039316-31039335 Msa1323090:CDS 30.0%
GATTATATGAGTATCAAGGA+TGG + chr8_4:31039383-31039402 Msa1323090:CDS 30.0%
AAGATTCTTGGATTGAAAGA+GGG + chr8_4:31039675-31039694 Msa1323090:CDS 30.0%
AAAAAATTGCTTATGCTGCT+TGG + chr8_4:31039747-31039766 Msa1323090:CDS 30.0%
AATAAAACCATTCCTTGTAC+AGG - chr8_4:31039801-31039820 None:intergenic 30.0%
GTGAAATAAGTGAAAAAAGC+AGG - chr8_4:31039896-31039915 None:intergenic 30.0%
TTACAATTGCAGCTTAAAGA+AGG - chr8_4:31039956-31039975 None:intergenic 30.0%
TTCATGCATTCAAAGAAATG+AGG + chr8_4:31040006-31040025 Msa1323090:CDS 30.0%
TCATGCATTCAAAGAAATGA+GGG + chr8_4:31040007-31040026 Msa1323090:CDS 30.0%
CAAATAGTATTCTAGTGAGT+CGG + chr8_4:31040047-31040066 Msa1323090:CDS 30.0%
!! ACTTTTATTTGTGAGTATGC+AGG + chr8_4:31040223-31040242 Msa1323090:CDS 30.0%
TTCAACATTCTGATATACCT+TGG - chr8_4:31040266-31040285 None:intergenic 30.0%
AAGGTATATCAGAATGTTGA+AGG + chr8_4:31040265-31040284 Msa1323090:CDS 30.0%
GTATTTATGAACCATTCAAG+TGG + chr8_4:31040320-31040339 Msa1323090:CDS 30.0%
AAGTTCAAATGTATGTAGTG+AGG + chr8_4:31040372-31040391 Msa1323090:CDS 30.0%
TTCTTGGCACTTATAATTAG+AGG - chr8_4:31040415-31040434 None:intergenic 30.0%
AATTATAAGTGCCAAGAATG+TGG + chr8_4:31040417-31040436 Msa1323090:CDS 30.0%
ATTATAAGTGCCAAGAATGT+GGG + chr8_4:31040418-31040437 Msa1323090:CDS 30.0%
! TTATTTTCCGCATATAAGAC+TGG - chr8_4:31040496-31040515 None:intergenic 30.0%
GCAGAGTTAACATATGATTA+TGG + chr8_4:31040568-31040587 Msa1323090:CDS 30.0%
!!! TGAACATGTTTTGGTAAAAC+AGG - chr8_4:31038684-31038703 None:intergenic 30.0%
TTGACAAATGAGTAAAATGG+AGG - chr8_4:31038741-31038760 None:intergenic 30.0%
GGTTTGACAAATGAGTAAAA+TGG - chr8_4:31038744-31038763 None:intergenic 30.0%
GATGAAGAAATGAATCAACA+AGG + chr8_4:31038915-31038934 Msa1323090:CDS 30.0%
! ACTAAAAGATGATGGTGATA+GGG + chr8_4:31039100-31039119 Msa1323090:CDS 30.0%
!! AGTAATGCTTTGACTTGTAA+AGG + chr8_4:31039239-31039258 Msa1323090:CDS 30.0%
!! GTAATGCTTTGACTTGTAAA+GGG + chr8_4:31039240-31039259 Msa1323090:CDS 30.0%
!!! GGATGTTTTCTTTTTTCGAA+TGG + chr8_4:31039316-31039335 Msa1323090:CDS 30.0%
GATTATATGAGTATCAAGGA+TGG + chr8_4:31039383-31039402 Msa1323090:CDS 30.0%
AAGATTCTTGGATTGAAAGA+GGG + chr8_4:31039675-31039694 Msa1323090:CDS 30.0%
AAAAAATTGCTTATGCTGCT+TGG + chr8_4:31039747-31039766 Msa1323090:CDS 30.0%
AATAAAACCATTCCTTGTAC+AGG - chr8_4:31039801-31039820 None:intergenic 30.0%
GTGAAATAAGTGAAAAAAGC+AGG - chr8_4:31039896-31039915 None:intergenic 30.0%
TTACAATTGCAGCTTAAAGA+AGG - chr8_4:31039956-31039975 None:intergenic 30.0%
TTCATGCATTCAAAGAAATG+AGG + chr8_4:31040006-31040025 Msa1323090:CDS 30.0%
TCATGCATTCAAAGAAATGA+GGG + chr8_4:31040007-31040026 Msa1323090:CDS 30.0%
CAAATAGTATTCTAGTGAGT+CGG + chr8_4:31040047-31040066 Msa1323090:CDS 30.0%
!! ACTTTTATTTGTGAGTATGC+AGG + chr8_4:31040223-31040242 Msa1323090:CDS 30.0%
TTCAACATTCTGATATACCT+TGG - chr8_4:31040266-31040285 None:intergenic 30.0%
AAGGTATATCAGAATGTTGA+AGG + chr8_4:31040265-31040284 Msa1323090:CDS 30.0%
GTATTTATGAACCATTCAAG+TGG + chr8_4:31040320-31040339 Msa1323090:CDS 30.0%
AAGTTCAAATGTATGTAGTG+AGG + chr8_4:31040372-31040391 Msa1323090:CDS 30.0%
TTCTTGGCACTTATAATTAG+AGG - chr8_4:31040415-31040434 None:intergenic 30.0%
AATTATAAGTGCCAAGAATG+TGG + chr8_4:31040417-31040436 Msa1323090:CDS 30.0%
ATTATAAGTGCCAAGAATGT+GGG + chr8_4:31040418-31040437 Msa1323090:CDS 30.0%
! TTATTTTCCGCATATAAGAC+TGG - chr8_4:31040496-31040515 None:intergenic 30.0%
GCAGAGTTAACATATGATTA+TGG + chr8_4:31040568-31040587 Msa1323090:CDS 30.0%
!! AACACGGATTGAACATGTTT+TGG - chr8_4:31038693-31038712 None:intergenic 35.0%
TTTCGGAAGAGGAATTTGAT+GGG - chr8_4:31038766-31038785 None:intergenic 35.0%
GAAATGAATCAACAAGGCTA+TGG + chr8_4:31038921-31038940 Msa1323090:CDS 35.0%
! TGATAAACGAAAGCGTAGTA+CGG + chr8_4:31038977-31038996 Msa1323090:CDS 35.0%
! TCACCATCATCTTTTAGTGT+CGG - chr8_4:31039098-31039117 None:intergenic 35.0%
! CACTAAAAGATGATGGTGAT+AGG + chr8_4:31039099-31039118 Msa1323090:CDS 35.0%
TGACGTTTGATTCAATTCGA+AGG + chr8_4:31039144-31039163 Msa1323090:CDS 35.0%
! AAGGGTTTAAAACTAACACG+AGG + chr8_4:31039258-31039277 Msa1323090:CDS 35.0%
TCAAAGAGGTAATCTTGCTT+TGG + chr8_4:31039547-31039566 Msa1323090:CDS 35.0%
CTCTTTCAATCCAAGAATCT+TGG - chr8_4:31039676-31039695 None:intergenic 35.0%
CAAGATTCTTGGATTGAAAG+AGG + chr8_4:31039674-31039693 Msa1323090:CDS 35.0%
!! TATAAGTTGGTAAGGTTACC+TGG + chr8_4:31039722-31039741 Msa1323090:CDS 35.0%
!!! GCATAAGCAATTTTTTGACC+AGG - chr8_4:31039743-31039762 None:intergenic 35.0%
ACATCATTGACAAGTGATAC+TGG - chr8_4:31039857-31039876 None:intergenic 35.0%
AATGATGTCGATGATGAGAA+GGG + chr8_4:31039869-31039888 Msa1323090:CDS 35.0%
ATGAACAGTTCAAATCACCT+GGG - chr8_4:31039991-31040010 None:intergenic 35.0%
AAAAATCGAGTATCACAGAC+TGG + chr8_4:31040121-31040140 Msa1323090:CDS 35.0%
!! GACTGGTTTAAAACAACACA+TGG + chr8_4:31040138-31040157 Msa1323090:CDS 35.0%
!! ATGGAAGTGTTCAGAACAAA+GGG + chr8_4:31040157-31040176 Msa1323090:CDS 35.0%
!! ATAAAAGTACCAGCACGTAT+AGG - chr8_4:31040211-31040230 None:intergenic 35.0%
AGAAGTTATTAACAGAGCCA+AGG + chr8_4:31040246-31040265 Msa1323090:CDS 35.0%
GGTTCATAATTCCACTTGAA+TGG - chr8_4:31040334-31040353 None:intergenic 35.0%
GAATTATGAACCTAGCTTAC+TGG + chr8_4:31040342-31040361 Msa1323090:CDS 35.0%
GCACTTATAATTAGAGGAGA+TGG - chr8_4:31040409-31040428 None:intergenic 35.0%
AGCTATATTTCCCACATTCT+TGG - chr8_4:31040431-31040450 None:intergenic 35.0%
TAAGGGCAAAAAATGCAATG+TGG - chr8_4:31040531-31040550 None:intergenic 35.0%
CATTGGAGGAATATGTCTAA+GGG - chr8_4:31040548-31040567 None:intergenic 35.0%
TCATATGTTAACTCTGCCAT+TGG - chr8_4:31040565-31040584 None:intergenic 35.0%
GCATTTCTTTCTCCTTCTAA+AGG - chr8_4:31040629-31040648 None:intergenic 35.0%
!! AACACGGATTGAACATGTTT+TGG - chr8_4:31038693-31038712 None:intergenic 35.0%
TTTCGGAAGAGGAATTTGAT+GGG - chr8_4:31038766-31038785 None:intergenic 35.0%
GAAATGAATCAACAAGGCTA+TGG + chr8_4:31038921-31038940 Msa1323090:CDS 35.0%
! TGATAAACGAAAGCGTAGTA+CGG + chr8_4:31038977-31038996 Msa1323090:CDS 35.0%
! TCACCATCATCTTTTAGTGT+CGG - chr8_4:31039098-31039117 None:intergenic 35.0%
! CACTAAAAGATGATGGTGAT+AGG + chr8_4:31039099-31039118 Msa1323090:CDS 35.0%
TGACGTTTGATTCAATTCGA+AGG + chr8_4:31039144-31039163 Msa1323090:CDS 35.0%
! AAGGGTTTAAAACTAACACG+AGG + chr8_4:31039258-31039277 Msa1323090:CDS 35.0%
TCAAAGAGGTAATCTTGCTT+TGG + chr8_4:31039547-31039566 Msa1323090:CDS 35.0%
CTCTTTCAATCCAAGAATCT+TGG - chr8_4:31039676-31039695 None:intergenic 35.0%
CAAGATTCTTGGATTGAAAG+AGG + chr8_4:31039674-31039693 Msa1323090:CDS 35.0%
!! TATAAGTTGGTAAGGTTACC+TGG + chr8_4:31039722-31039741 Msa1323090:CDS 35.0%
!!! GCATAAGCAATTTTTTGACC+AGG - chr8_4:31039743-31039762 None:intergenic 35.0%
ACATCATTGACAAGTGATAC+TGG - chr8_4:31039857-31039876 None:intergenic 35.0%
AATGATGTCGATGATGAGAA+GGG + chr8_4:31039869-31039888 Msa1323090:CDS 35.0%
ATGAACAGTTCAAATCACCT+GGG - chr8_4:31039991-31040010 None:intergenic 35.0%
AAAAATCGAGTATCACAGAC+TGG + chr8_4:31040121-31040140 Msa1323090:CDS 35.0%
!! GACTGGTTTAAAACAACACA+TGG + chr8_4:31040138-31040157 Msa1323090:CDS 35.0%
!! ATGGAAGTGTTCAGAACAAA+GGG + chr8_4:31040157-31040176 Msa1323090:CDS 35.0%
!! ATAAAAGTACCAGCACGTAT+AGG - chr8_4:31040211-31040230 None:intergenic 35.0%
AGAAGTTATTAACAGAGCCA+AGG + chr8_4:31040246-31040265 Msa1323090:CDS 35.0%
GGTTCATAATTCCACTTGAA+TGG - chr8_4:31040334-31040353 None:intergenic 35.0%
GAATTATGAACCTAGCTTAC+TGG + chr8_4:31040342-31040361 Msa1323090:CDS 35.0%
GCACTTATAATTAGAGGAGA+TGG - chr8_4:31040409-31040428 None:intergenic 35.0%
AGCTATATTTCCCACATTCT+TGG - chr8_4:31040431-31040450 None:intergenic 35.0%
TAAGGGCAAAAAATGCAATG+TGG - chr8_4:31040531-31040550 None:intergenic 35.0%
CATTGGAGGAATATGTCTAA+GGG - chr8_4:31040548-31040567 None:intergenic 35.0%
TCATATGTTAACTCTGCCAT+TGG - chr8_4:31040565-31040584 None:intergenic 35.0%
GCATTTCTTTCTCCTTCTAA+AGG - chr8_4:31040629-31040648 None:intergenic 35.0%
ACAGGTGCTAAACTACGTAA+GGG - chr8_4:31038666-31038685 None:intergenic 40.0%
AACAGGTGCTAAACTACGTA+AGG - chr8_4:31038667-31038686 None:intergenic 40.0%
! CATGTTCAATCCGTGTTTTC+TGG + chr8_4:31038696-31038715 Msa1323090:CDS 40.0%
AAAATGGAGGAAACCCAGAT+GGG - chr8_4:31038728-31038747 None:intergenic 40.0%
TAAAATGGAGGAAACCCAGA+TGG - chr8_4:31038729-31038748 None:intergenic 40.0%
TTCGGAAGAGGAATTTGATG+GGG - chr8_4:31038765-31038784 None:intergenic 40.0%
CTTTCGGAAGAGGAATTTGA+TGG - chr8_4:31038767-31038786 None:intergenic 40.0%
TGCCAAAGTGACTCCAATAA+GGG + chr8_4:31038875-31038894 Msa1323090:CDS 40.0%
GAACTCTTGTAGACCCTTAT+TGG - chr8_4:31038891-31038910 None:intergenic 40.0%
TGGAGATAGCGACGATTATT+CGG + chr8_4:31038941-31038960 Msa1323090:CDS 40.0%
ATAGCGACGATTATTCGGAA+GGG + chr8_4:31038946-31038965 Msa1323090:CDS 40.0%
GATTATTCGGAAGGGTTTGT+AGG + chr8_4:31038954-31038973 Msa1323090:CDS 40.0%
AACCCGACACTAAAAGATGA+TGG + chr8_4:31039092-31039111 Msa1323090:CDS 40.0%
! CACCATCATCTTTTAGTGTC+GGG - chr8_4:31039097-31039116 None:intergenic 40.0%
CGTTTGATTCAATTCGAAGG+AGG + chr8_4:31039147-31039166 Msa1323090:CDS 40.0%
TCGAATGGAAATGTGTCTTG+TGG + chr8_4:31039331-31039350 Msa1323090:CDS 40.0%
CGAATGGAAATGTGTCTTGT+GGG + chr8_4:31039332-31039351 Msa1323090:CDS 40.0%
GGTTTGCATGCTCAATCAAT+GGG + chr8_4:31039353-31039372 Msa1323090:CDS 40.0%
GAGTATCAAGGATGGATCTA+AGG + chr8_4:31039391-31039410 Msa1323090:CDS 40.0%
TATCAAGGATGGATCTAAGG+AGG + chr8_4:31039394-31039413 Msa1323090:CDS 40.0%
! GTTGTTTCGTCAGGTGTATA+CGG + chr8_4:31039434-31039453 Msa1323090:CDS 40.0%
TGTATACGGTGATGATACAG+AGG + chr8_4:31039448-31039467 Msa1323090:CDS 40.0%
ACTGATCAGAAGCTTCAAAG+AGG + chr8_4:31039533-31039552 Msa1323090:CDS 40.0%
GATGAAGTTAGAGTCATTCG+AGG + chr8_4:31039590-31039609 Msa1323090:CDS 40.0%
TGGATTGAAAGAGGGAAATC+TGG + chr8_4:31039683-31039702 Msa1323090:CDS 40.0%
ATTGAAAGAGGGAAATCTGG+CGG + chr8_4:31039686-31039705 Msa1323090:CDS 40.0%
! TGCTTATGCTGCTTGGAAAT+TGG + chr8_4:31039754-31039773 Msa1323090:CDS 40.0%
! CTTGGAAATTGGCTCAAAAG+TGG + chr8_4:31039765-31039784 Msa1323090:CDS 40.0%
! GAAATTGGCTCAAAAGTGGA+AGG + chr8_4:31039769-31039788 Msa1323090:CDS 40.0%
TGGAATACTTTCAACCCCAT+TGG - chr8_4:31039837-31039856 None:intergenic 40.0%
CAATGATGTCGATGATGAGA+AGG + chr8_4:31039868-31039887 Msa1323090:CDS 40.0%
! CTCAAAAACCCGAAACCTTT+TGG + chr8_4:31039920-31039939 Msa1323090:CDS 40.0%
TGCACTAGACCAAAAGGTTT+CGG - chr8_4:31039932-31039951 None:intergenic 40.0%
CATGAACAGTTCAAATCACC+TGG - chr8_4:31039992-31040011 None:intergenic 40.0%
AAGCCGCTTATTCATGAATG+TGG + chr8_4:31040070-31040089 Msa1323090:CDS 40.0%
TAGGAAAACACCGACACATA+GGG - chr8_4:31040096-31040115 None:intergenic 40.0%
! GATACTCGATTTTTGCAGGT+AGG - chr8_4:31040115-31040134 None:intergenic 40.0%
! CTGTGATACTCGATTTTTGC+AGG - chr8_4:31040119-31040138 None:intergenic 40.0%
!! CATGGAAGTGTTCAGAACAA+AGG + chr8_4:31040156-31040175 Msa1323090:CDS 40.0%
CTTACATCTTCCAGTAAGCT+AGG - chr8_4:31040355-31040374 None:intergenic 40.0%
!!! GTTGCTCCCCAAATGTTTTT+TGG + chr8_4:31040467-31040486 Msa1323090:CDS 40.0%
TGGCTGCCAAAAAACATTTG+GGG - chr8_4:31040476-31040495 None:intergenic 40.0%
CTGGCTGCCAAAAAACATTT+GGG - chr8_4:31040477-31040496 None:intergenic 40.0%
ACTGGCTGCCAAAAAACATT+TGG - chr8_4:31040478-31040497 None:intergenic 40.0%
CCATTGGAGGAATATGTCTA+AGG - chr8_4:31040549-31040568 None:intergenic 40.0%
CCTTAGACATATTCCTCCAA+TGG + chr8_4:31040546-31040565 Msa1323090:CDS 40.0%
TATGTTAACTCTGCCATTGG+AGG - chr8_4:31040562-31040581 None:intergenic 40.0%
GATTATGGAATTACCCATGC+TGG + chr8_4:31040583-31040602 Msa1323090:CDS 40.0%
AGGAGAAAGAAATGCTTGTG+TGG + chr8_4:31040634-31040653 Msa1323090:CDS 40.0%
GGAGAAAGAAATGCTTGTGT+GGG + chr8_4:31040635-31040654 Msa1323090:CDS 40.0%
ACAGGTGCTAAACTACGTAA+GGG - chr8_4:31038666-31038685 None:intergenic 40.0%
AACAGGTGCTAAACTACGTA+AGG - chr8_4:31038667-31038686 None:intergenic 40.0%
! CATGTTCAATCCGTGTTTTC+TGG + chr8_4:31038696-31038715 Msa1323090:CDS 40.0%
AAAATGGAGGAAACCCAGAT+GGG - chr8_4:31038728-31038747 None:intergenic 40.0%
TAAAATGGAGGAAACCCAGA+TGG - chr8_4:31038729-31038748 None:intergenic 40.0%
TTCGGAAGAGGAATTTGATG+GGG - chr8_4:31038765-31038784 None:intergenic 40.0%
CTTTCGGAAGAGGAATTTGA+TGG - chr8_4:31038767-31038786 None:intergenic 40.0%
TGCCAAAGTGACTCCAATAA+GGG + chr8_4:31038875-31038894 Msa1323090:CDS 40.0%
GAACTCTTGTAGACCCTTAT+TGG - chr8_4:31038891-31038910 None:intergenic 40.0%
TGGAGATAGCGACGATTATT+CGG + chr8_4:31038941-31038960 Msa1323090:CDS 40.0%
ATAGCGACGATTATTCGGAA+GGG + chr8_4:31038946-31038965 Msa1323090:CDS 40.0%
GATTATTCGGAAGGGTTTGT+AGG + chr8_4:31038954-31038973 Msa1323090:CDS 40.0%
AACCCGACACTAAAAGATGA+TGG + chr8_4:31039092-31039111 Msa1323090:CDS 40.0%
! CACCATCATCTTTTAGTGTC+GGG - chr8_4:31039097-31039116 None:intergenic 40.0%
CGTTTGATTCAATTCGAAGG+AGG + chr8_4:31039147-31039166 Msa1323090:CDS 40.0%
TCGAATGGAAATGTGTCTTG+TGG + chr8_4:31039331-31039350 Msa1323090:CDS 40.0%
CGAATGGAAATGTGTCTTGT+GGG + chr8_4:31039332-31039351 Msa1323090:CDS 40.0%
GGTTTGCATGCTCAATCAAT+GGG + chr8_4:31039353-31039372 Msa1323090:CDS 40.0%
GAGTATCAAGGATGGATCTA+AGG + chr8_4:31039391-31039410 Msa1323090:CDS 40.0%
TATCAAGGATGGATCTAAGG+AGG + chr8_4:31039394-31039413 Msa1323090:CDS 40.0%
! GTTGTTTCGTCAGGTGTATA+CGG + chr8_4:31039434-31039453 Msa1323090:CDS 40.0%
TGTATACGGTGATGATACAG+AGG + chr8_4:31039448-31039467 Msa1323090:CDS 40.0%
ACTGATCAGAAGCTTCAAAG+AGG + chr8_4:31039533-31039552 Msa1323090:CDS 40.0%
GATGAAGTTAGAGTCATTCG+AGG + chr8_4:31039590-31039609 Msa1323090:CDS 40.0%
TGGATTGAAAGAGGGAAATC+TGG + chr8_4:31039683-31039702 Msa1323090:CDS 40.0%
ATTGAAAGAGGGAAATCTGG+CGG + chr8_4:31039686-31039705 Msa1323090:CDS 40.0%
! TGCTTATGCTGCTTGGAAAT+TGG + chr8_4:31039754-31039773 Msa1323090:CDS 40.0%
! CTTGGAAATTGGCTCAAAAG+TGG + chr8_4:31039765-31039784 Msa1323090:CDS 40.0%
! GAAATTGGCTCAAAAGTGGA+AGG + chr8_4:31039769-31039788 Msa1323090:CDS 40.0%
TGGAATACTTTCAACCCCAT+TGG - chr8_4:31039837-31039856 None:intergenic 40.0%
CAATGATGTCGATGATGAGA+AGG + chr8_4:31039868-31039887 Msa1323090:CDS 40.0%
! CTCAAAAACCCGAAACCTTT+TGG + chr8_4:31039920-31039939 Msa1323090:CDS 40.0%
TGCACTAGACCAAAAGGTTT+CGG - chr8_4:31039932-31039951 None:intergenic 40.0%
CATGAACAGTTCAAATCACC+TGG - chr8_4:31039992-31040011 None:intergenic 40.0%
AAGCCGCTTATTCATGAATG+TGG + chr8_4:31040070-31040089 Msa1323090:CDS 40.0%
TAGGAAAACACCGACACATA+GGG - chr8_4:31040096-31040115 None:intergenic 40.0%
! GATACTCGATTTTTGCAGGT+AGG - chr8_4:31040115-31040134 None:intergenic 40.0%
! CTGTGATACTCGATTTTTGC+AGG - chr8_4:31040119-31040138 None:intergenic 40.0%
!! CATGGAAGTGTTCAGAACAA+AGG + chr8_4:31040156-31040175 Msa1323090:CDS 40.0%
CTTACATCTTCCAGTAAGCT+AGG - chr8_4:31040355-31040374 None:intergenic 40.0%
!!! GTTGCTCCCCAAATGTTTTT+TGG + chr8_4:31040467-31040486 Msa1323090:CDS 40.0%
TGGCTGCCAAAAAACATTTG+GGG - chr8_4:31040476-31040495 None:intergenic 40.0%
CTGGCTGCCAAAAAACATTT+GGG - chr8_4:31040477-31040496 None:intergenic 40.0%
ACTGGCTGCCAAAAAACATT+TGG - chr8_4:31040478-31040497 None:intergenic 40.0%
CCATTGGAGGAATATGTCTA+AGG - chr8_4:31040549-31040568 None:intergenic 40.0%
CCTTAGACATATTCCTCCAA+TGG + chr8_4:31040546-31040565 Msa1323090:CDS 40.0%
TATGTTAACTCTGCCATTGG+AGG - chr8_4:31040562-31040581 None:intergenic 40.0%
GATTATGGAATTACCCATGC+TGG + chr8_4:31040583-31040602 Msa1323090:CDS 40.0%
AGGAGAAAGAAATGCTTGTG+TGG + chr8_4:31040634-31040653 Msa1323090:CDS 40.0%
GGAGAAAGAAATGCTTGTGT+GGG + chr8_4:31040635-31040654 Msa1323090:CDS 40.0%
! GTTCAATCCGTGTTTTCTGG+TGG + chr8_4:31038699-31038718 Msa1323090:CDS 45.0%
TGGGTATCCACCAGAAAACA+CGG - chr8_4:31038709-31038728 None:intergenic 45.0%
!! TTTTCTGGTGGATACCCATC+TGG + chr8_4:31038711-31038730 Msa1323090:CDS 45.0%
! TTTCTGGTGGATACCCATCT+GGG + chr8_4:31038712-31038731 Msa1323090:CDS 45.0%
! GGCTACTTTGACATCAACAG+GGG - chr8_4:31038802-31038821 None:intergenic 45.0%
! CGGCTACTTTGACATCAACA+GGG - chr8_4:31038803-31038822 None:intergenic 45.0%
! TCGGCTACTTTGACATCAAC+AGG - chr8_4:31038804-31038823 None:intergenic 45.0%
CTGCCAAAGTGACTCCAATA+AGG + chr8_4:31038874-31038893 Msa1323090:CDS 45.0%
GACCCTTATTGGAGTCACTT+TGG - chr8_4:31038880-31038899 None:intergenic 45.0%
GATAGCGACGATTATTCGGA+AGG + chr8_4:31038945-31038964 Msa1323090:CDS 45.0%
GGTGGTACGAGTTCTTATGT+TGG + chr8_4:31039065-31039084 Msa1323090:CDS 45.0%
ATGCCAACTTGAAGAGTCGA+AGG + chr8_4:31039172-31039191 Msa1323090:CDS 45.0%
GTTCCTTCGACTCTTCAAGT+TGG - chr8_4:31039178-31039197 None:intergenic 45.0%
AACTAACACGAGGAGAAGAG+CGG + chr8_4:31039268-31039287 Msa1323090:CDS 45.0%
GGGTTTGCATGCTCAATCAA+TGG + chr8_4:31039352-31039371 Msa1323090:CDS 45.0%
TTGCATGCTCAATCAATGGG+TGG + chr8_4:31039356-31039375 Msa1323090:CDS 45.0%
TGGATCTAAGGAGGATACTG+TGG + chr8_4:31039403-31039422 Msa1323090:CDS 45.0%
ATTCTTGCTGACCTCTCCAA+TGG + chr8_4:31039818-31039837 Msa1323090:CDS 45.0%
TTCTTGCTGACCTCTCCAAT+GGG + chr8_4:31039819-31039838 Msa1323090:CDS 45.0%
TACTTTCAACCCCATTGGAG+AGG - chr8_4:31039832-31039851 None:intergenic 45.0%
GCACTAGACCAAAAGGTTTC+GGG - chr8_4:31039931-31039950 None:intergenic 45.0%
GGGCCACATTCATGAATAAG+CGG - chr8_4:31040076-31040095 None:intergenic 45.0%
ATGAATGTGGCCCTATGTGT+CGG + chr8_4:31040083-31040102 Msa1323090:CDS 45.0%
GTAGGAAAACACCGACACAT+AGG - chr8_4:31040097-31040116 None:intergenic 45.0%
GTGTTCAGAACAAAGGGTAG+AGG + chr8_4:31040163-31040182 Msa1323090:CDS 45.0%
TCAGAACAAAGGGTAGAGGT+TGG + chr8_4:31040167-31040186 Msa1323090:CDS 45.0%
CAGAACAAAGGGTAGAGGTT+GGG + chr8_4:31040168-31040187 Msa1323090:CDS 45.0%
AGAACAAAGGGTAGAGGTTG+GGG + chr8_4:31040169-31040188 Msa1323090:CDS 45.0%
! TTGGCAGCCAGTCTTATATG+CGG + chr8_4:31040486-31040505 Msa1323090:CDS 45.0%
! GTTCAATCCGTGTTTTCTGG+TGG + chr8_4:31038699-31038718 Msa1323090:CDS 45.0%
TGGGTATCCACCAGAAAACA+CGG - chr8_4:31038709-31038728 None:intergenic 45.0%
!! TTTTCTGGTGGATACCCATC+TGG + chr8_4:31038711-31038730 Msa1323090:CDS 45.0%
! TTTCTGGTGGATACCCATCT+GGG + chr8_4:31038712-31038731 Msa1323090:CDS 45.0%
! GGCTACTTTGACATCAACAG+GGG - chr8_4:31038802-31038821 None:intergenic 45.0%
! CGGCTACTTTGACATCAACA+GGG - chr8_4:31038803-31038822 None:intergenic 45.0%
! TCGGCTACTTTGACATCAAC+AGG - chr8_4:31038804-31038823 None:intergenic 45.0%
CTGCCAAAGTGACTCCAATA+AGG + chr8_4:31038874-31038893 Msa1323090:CDS 45.0%
GACCCTTATTGGAGTCACTT+TGG - chr8_4:31038880-31038899 None:intergenic 45.0%
GATAGCGACGATTATTCGGA+AGG + chr8_4:31038945-31038964 Msa1323090:CDS 45.0%
GGTGGTACGAGTTCTTATGT+TGG + chr8_4:31039065-31039084 Msa1323090:CDS 45.0%
ATGCCAACTTGAAGAGTCGA+AGG + chr8_4:31039172-31039191 Msa1323090:CDS 45.0%
GTTCCTTCGACTCTTCAAGT+TGG - chr8_4:31039178-31039197 None:intergenic 45.0%
AACTAACACGAGGAGAAGAG+CGG + chr8_4:31039268-31039287 Msa1323090:CDS 45.0%
GGGTTTGCATGCTCAATCAA+TGG + chr8_4:31039352-31039371 Msa1323090:CDS 45.0%
TTGCATGCTCAATCAATGGG+TGG + chr8_4:31039356-31039375 Msa1323090:CDS 45.0%
TGGATCTAAGGAGGATACTG+TGG + chr8_4:31039403-31039422 Msa1323090:CDS 45.0%
ATTCTTGCTGACCTCTCCAA+TGG + chr8_4:31039818-31039837 Msa1323090:CDS 45.0%
TTCTTGCTGACCTCTCCAAT+GGG + chr8_4:31039819-31039838 Msa1323090:CDS 45.0%
TACTTTCAACCCCATTGGAG+AGG - chr8_4:31039832-31039851 None:intergenic 45.0%
GCACTAGACCAAAAGGTTTC+GGG - chr8_4:31039931-31039950 None:intergenic 45.0%
GGGCCACATTCATGAATAAG+CGG - chr8_4:31040076-31040095 None:intergenic 45.0%
ATGAATGTGGCCCTATGTGT+CGG + chr8_4:31040083-31040102 Msa1323090:CDS 45.0%
GTAGGAAAACACCGACACAT+AGG - chr8_4:31040097-31040116 None:intergenic 45.0%
GTGTTCAGAACAAAGGGTAG+AGG + chr8_4:31040163-31040182 Msa1323090:CDS 45.0%
TCAGAACAAAGGGTAGAGGT+TGG + chr8_4:31040167-31040186 Msa1323090:CDS 45.0%
CAGAACAAAGGGTAGAGGTT+GGG + chr8_4:31040168-31040187 Msa1323090:CDS 45.0%
AGAACAAAGGGTAGAGGTTG+GGG + chr8_4:31040169-31040188 Msa1323090:CDS 45.0%
! TTGGCAGCCAGTCTTATATG+CGG + chr8_4:31040486-31040505 Msa1323090:CDS 45.0%
TCCTCTTCCGAAAGAAGCTG+AGG + chr8_4:31038773-31038792 Msa1323090:CDS 50.0%
TCCTCAGCTTCTTTCGGAAG+AGG - chr8_4:31038777-31038796 None:intergenic 50.0%
GGGGTTTCCTCAGCTTCTTT+CGG - chr8_4:31038783-31038802 None:intergenic 50.0%
CAAAGTAGCCGAGAAAACGC+CGG + chr8_4:31038812-31038831 Msa1323090:CDS 50.0%
! TGCTTTCACCGGCGTTTTCT+CGG - chr8_4:31038823-31038842 None:intergenic 50.0%
GAAGAACAAAACTCGCGAGC+CGG + chr8_4:31039037-31039056 Msa1323090:CDS 50.0%
GAACTCGTACCACCAACAAC+CGG - chr8_4:31039059-31039078 None:intergenic 50.0%
!! TGCACTTGCTATCAAGCGTG+CGG + chr8_4:31039205-31039224 Msa1323090:CDS 50.0%
ACTAACACGAGGAGAAGAGC+GGG + chr8_4:31039269-31039288 Msa1323090:CDS 50.0%
TGGTGCCTGGGATTGAGATT+GGG + chr8_4:31039294-31039313 Msa1323090:CDS 50.0%
ACATCCCCAATCTCAATCCC+AGG - chr8_4:31039302-31039321 None:intergenic 50.0%
! GCGTTAAGCGTTGTTTCGTC+AGG + chr8_4:31039425-31039444 Msa1323090:CDS 50.0%
! CTTTGGACAGAAGTGCACAG+CGG + chr8_4:31039564-31039583 Msa1323090:CDS 50.0%
TTGGCTCAAAAGTGGAAGGC+AGG + chr8_4:31039773-31039792 Msa1323090:CDS 50.0%
GCAGGTTCCTGTACAAGGAA+TGG + chr8_4:31039791-31039810 Msa1323090:CDS 50.0%
TCTTGCTGACCTCTCCAATG+GGG + chr8_4:31039820-31039839 Msa1323090:CDS 50.0%
GAAGGCTGCACTAGACCAAA+AGG - chr8_4:31039938-31039957 None:intergenic 50.0%
TGTAACACAGCATGTGTCCC+AGG + chr8_4:31039971-31039990 Msa1323090:CDS 50.0%
GAACAAAGGGTAGAGGTTGG+GGG + chr8_4:31040170-31040189 Msa1323090:CDS 50.0%
ACACTGGATCCTATACGTGC+TGG + chr8_4:31040199-31040218 Msa1323090:CDS 50.0%
ATTACCCATGCTGGTCATGC+TGG + chr8_4:31040592-31040611 Msa1323090:CDS 50.0%
GAGGTAGCAGTGCCTTTAGA+AGG + chr8_4:31040614-31040633 Msa1323090:CDS 50.0%
!! GCAAAGTGCCGTGGTTTCTT+TGG + chr8_4:31040661-31040680 Msa1323090:CDS 50.0%
TCCTCTTCCGAAAGAAGCTG+AGG + chr8_4:31038773-31038792 Msa1323090:CDS 50.0%
TCCTCAGCTTCTTTCGGAAG+AGG - chr8_4:31038777-31038796 None:intergenic 50.0%
GGGGTTTCCTCAGCTTCTTT+CGG - chr8_4:31038783-31038802 None:intergenic 50.0%
CAAAGTAGCCGAGAAAACGC+CGG + chr8_4:31038812-31038831 Msa1323090:CDS 50.0%
! TGCTTTCACCGGCGTTTTCT+CGG - chr8_4:31038823-31038842 None:intergenic 50.0%
GAAGAACAAAACTCGCGAGC+CGG + chr8_4:31039037-31039056 Msa1323090:CDS 50.0%
GAACTCGTACCACCAACAAC+CGG - chr8_4:31039059-31039078 None:intergenic 50.0%
!! TGCACTTGCTATCAAGCGTG+CGG + chr8_4:31039205-31039224 Msa1323090:CDS 50.0%
ACTAACACGAGGAGAAGAGC+GGG + chr8_4:31039269-31039288 Msa1323090:CDS 50.0%
TGGTGCCTGGGATTGAGATT+GGG + chr8_4:31039294-31039313 Msa1323090:CDS 50.0%
ACATCCCCAATCTCAATCCC+AGG - chr8_4:31039302-31039321 None:intergenic 50.0%
! GCGTTAAGCGTTGTTTCGTC+AGG + chr8_4:31039425-31039444 Msa1323090:CDS 50.0%
! CTTTGGACAGAAGTGCACAG+CGG + chr8_4:31039564-31039583 Msa1323090:CDS 50.0%
TTGGCTCAAAAGTGGAAGGC+AGG + chr8_4:31039773-31039792 Msa1323090:CDS 50.0%
GCAGGTTCCTGTACAAGGAA+TGG + chr8_4:31039791-31039810 Msa1323090:CDS 50.0%
TCTTGCTGACCTCTCCAATG+GGG + chr8_4:31039820-31039839 Msa1323090:CDS 50.0%
GAAGGCTGCACTAGACCAAA+AGG - chr8_4:31039938-31039957 None:intergenic 50.0%
TGTAACACAGCATGTGTCCC+AGG + chr8_4:31039971-31039990 Msa1323090:CDS 50.0%
GAACAAAGGGTAGAGGTTGG+GGG + chr8_4:31040170-31040189 Msa1323090:CDS 50.0%
ACACTGGATCCTATACGTGC+TGG + chr8_4:31040199-31040218 Msa1323090:CDS 50.0%
ATTACCCATGCTGGTCATGC+TGG + chr8_4:31040592-31040611 Msa1323090:CDS 50.0%
GAGGTAGCAGTGCCTTTAGA+AGG + chr8_4:31040614-31040633 Msa1323090:CDS 50.0%
!! GCAAAGTGCCGTGGTTTCTT+TGG + chr8_4:31040661-31040680 Msa1323090:CDS 50.0%
! GGAGTCACTTTGGCAGCAAC+AGG - chr8_4:31038870-31038889 None:intergenic 55.0%
AAAACTCGCGAGCCGGTTGT+TGG + chr8_4:31039044-31039063 Msa1323090:CDS 55.0%
GTGGTGCCTGGGATTGAGAT+TGG + chr8_4:31039293-31039312 Msa1323090:CDS 55.0%
GGTGCCTGGGATTGAGATTG+GGG + chr8_4:31039295-31039314 Msa1323090:CDS 55.0%
GAAAGAGGGAAATCTGGCGG+TGG + chr8_4:31039689-31039708 Msa1323090:CDS 55.0%
GGAAGGCAGGTTCCTGTACA+AGG + chr8_4:31039786-31039805 Msa1323090:CDS 55.0%
ACCTCCAGCATGACCAGCAT+GGG - chr8_4:31040599-31040618 None:intergenic 55.0%
TACCTCCAGCATGACCAGCA+TGG - chr8_4:31040600-31040619 None:intergenic 55.0%
! GGAGTCACTTTGGCAGCAAC+AGG - chr8_4:31038870-31038889 None:intergenic 55.0%
AAAACTCGCGAGCCGGTTGT+TGG + chr8_4:31039044-31039063 Msa1323090:CDS 55.0%
GTGGTGCCTGGGATTGAGAT+TGG + chr8_4:31039293-31039312 Msa1323090:CDS 55.0%
GGTGCCTGGGATTGAGATTG+GGG + chr8_4:31039295-31039314 Msa1323090:CDS 55.0%
GAAAGAGGGAAATCTGGCGG+TGG + chr8_4:31039689-31039708 Msa1323090:CDS 55.0%
GGAAGGCAGGTTCCTGTACA+AGG + chr8_4:31039786-31039805 Msa1323090:CDS 55.0%
ACCTCCAGCATGACCAGCAT+GGG - chr8_4:31040599-31040618 None:intergenic 55.0%
TACCTCCAGCATGACCAGCA+TGG - chr8_4:31040600-31040619 None:intergenic 55.0%
!! GCTGCTGCTGCTGCTTTCAC+CGG - chr8_4:31038834-31038853 None:intergenic 60.0%
AGGTTGGGGGCTTCGAACAC+TGG + chr8_4:31040183-31040202 Msa1323090:CDS 60.0%
ACCCATGCTGGTCATGCTGG+AGG + chr8_4:31040595-31040614 Msa1323090:CDS 60.0%
!! TGTGGGTCAGCAAAGTGCCG+TGG + chr8_4:31040652-31040671 Msa1323090:CDS 60.0%
!! GCTGCTGCTGCTGCTTTCAC+CGG - chr8_4:31038834-31038853 None:intergenic 60.0%
AGGTTGGGGGCTTCGAACAC+TGG + chr8_4:31040183-31040202 Msa1323090:CDS 60.0%
ACCCATGCTGGTCATGCTGG+AGG + chr8_4:31040595-31040614 Msa1323090:CDS 60.0%
!! TGTGGGTCAGCAAAGTGCCG+TGG + chr8_4:31040652-31040671 Msa1323090:CDS 60.0%
ACTCGCGAGCCGGTTGTTGG+TGG + chr8_4:31039047-31039066 Msa1323090:CDS 65.0%
ACTCGCGAGCCGGTTGTTGG+TGG + chr8_4:31039047-31039066 Msa1323090:CDS 65.0%
CACGAGGAGAAGAGCGGGCG+TGG + chr8_4:31039274-31039293 Msa1323090:CDS 70.0%
AGAAGAGCGGGCGTGGTGCC+TGG + chr8_4:31039281-31039300 Msa1323090:CDS 70.0%
GAAGAGCGGGCGTGGTGCCT+GGG + chr8_4:31039282-31039301 Msa1323090:CDS 70.0%
CACGAGGAGAAGAGCGGGCG+TGG + chr8_4:31039274-31039293 Msa1323090:CDS 70.0%
AGAAGAGCGGGCGTGGTGCC+TGG + chr8_4:31039281-31039300 Msa1323090:CDS 70.0%
GAAGAGCGGGCGTGGTGCCT+GGG + chr8_4:31039282-31039301 Msa1323090:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 31038594 31040687 31038594 ID=Msa1323090;Name=Msa1323090
chr8_4 mRNA 31038594 31040687 31038594 ID=Msa1323090-mRNA-1;Parent=Msa1323090;Name=Msa1323090-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|-1|0|1|-1|1|1|0|697
chr8_4 exon 31038594 31040687 31038594 ID=Msa1323090-mRNA-1:exon:10169;Parent=Msa1323090-mRNA-1
chr8_4 CDS 31038594 31040687 31038594 ID=Msa1323090-mRNA-1:cds;Parent=Msa1323090-mRNA-1
Gene Sequence

>Msa1323090

ATGGAAGAACAACACAACAACAACACTGCTTCAGATTCATTTGACAAATCTAAGATTGTTGAAGTCAAACCCTTACGTAGTTTAGCACCTGTTTTACCAAAACATGTTCAATCCGTGTTTTCTGGTGGATACCCATCTGGGTTTCCTCCATTTTACTCATTTGTCAAACCCCATCAAATTCCTCTTCCGAAAGAAGCTGAGGAAACCCCTGTTGATGTCAAAGTAGCCGAGAAAACGCCGGTGAAAGCAGCAGCAGCAGCAGCTCATGACACTCCTGTTGCTGCCAAAGTGACTCCAATAAGGGTCTACAAGAGTTCACATGATGAAGAAATGAATCAACAAGGCTATGGAGATAGCGACGATTATTCGGAAGGGTTTGTAGGTGATAAACGAAAGCGTAGTACGGATAATATTGAGAATTGCAAAGAGTTTCTTAAAAGGAAGAAGAACAAAACTCGCGAGCCGGTTGTTGGTGGTACGAGTTCTTATGTTGGTGTTAACCCGACACTAAAAGATGATGGTGATAGGGAGTCAGTTAATCATGTGCTTATGACGTTTGATTCAATTCGAAGGAGGCTATGCCAACTTGAAGAGTCGAAGGAACTAAACAATGCACTTGCTATCAAGCGTGCGGATCTAAGAGCGAGTAATGCTTTGACTTGTAAAGGGTTTAAAACTAACACGAGGAGAAGAGCGGGCGTGGTGCCTGGGATTGAGATTGGGGATGTTTTCTTTTTTCGAATGGAAATGTGTCTTGTGGGTTTGCATGCTCAATCAATGGGTGGAATTGATTATATGAGTATCAAGGATGGATCTAAGGAGGATACTGTGGCGTTAAGCGTTGTTTCGTCAGGTGTATACGGTGATGATACAGAGGATAATAATGTTTTAATTTATAGTGGTCAGGGTGAGAATTTCAACAAGAAAGATAAACATGTGACTGATCAGAAGCTTCAAAGAGGTAATCTTGCTTTGGACAGAAGTGCACAGCGGCACGATGAAGTTAGAGTCATTCGAGGCGTGAGAGATCCTGTGAATAGAAGTTCAAAAATCTATATGTATGATGGTTTATATAAAATCCAAGATTCTTGGATTGAAAGAGGGAAATCTGGCGGTGGTATATTTAAGTATAAGTTGGTAAGGTTACCTGGTCAAAAAATTGCTTATGCTGCTTGGAAATTGGCTCAAAAGTGGAAGGCAGGTTCCTGTACAAGGAATGGTTTTATTCTTGCTGACCTCTCCAATGGGGTTGAAAGTATTCCAGTATCACTTGTCAATGATGTCGATGATGAGAAGGGTCCTGCTTTTTTCACTTATTTCACGTCTCTCAAAAACCCGAAACCTTTTGGTCTAGTGCAGCCTTCTTTAAGCTGCAATTGTAACACAGCATGTGTCCCAGGTGATTTGAACTGTTCATGCATTCAAAGAAATGAGGGTGATTTTCCGTATACTGCAAATAGTATTCTAGTGAGTCGGAAGCCGCTTATTCATGAATGTGGCCCTATGTGTCGGTGTTTTCCTACCTGCAAAAATCGAGTATCACAGACTGGTTTAAAACAACACATGGAAGTGTTCAGAACAAAGGGTAGAGGTTGGGGGCTTCGAACACTGGATCCTATACGTGCTGGTACTTTTATTTGTGAGTATGCAGGAGAAGTTATTAACAGAGCCAAGGTATATCAGAATGTTGAAGGAGATAATGACGAATATGTTTTTGATACAAGCCGTATTTATGAACCATTCAAGTGGAATTATGAACCTAGCTTACTGGAAGATGTAAGTTCAAATGTATGTAGTGAGGATTATACTATACCATCTCCTCTAATTATAAGTGCCAAGAATGTGGGAAATATAGCTAGATTCATGAATCATAGTTGCTCCCCAAATGTTTTTTGGCAGCCAGTCTTATATGCGGAAAATAATCAATCCTTTATCCACATTGCATTTTTTGCCCTTAGACATATTCCTCCAATGGCAGAGTTAACATATGATTATGGAATTACCCATGCTGGTCATGCTGGAGGTAGCAGTGCCTTTAGAAGGAGAAAGAAATGCTTGTGTGGGTCAGCAAAGTGCCGTGGTTTCTTTGGTTAA
Protein sequence

>Msa1323090

MEEQHNNNTASDSFDKSKIVEVKPLRSLAPVLPKHVQSVFSGGYPSGFPPFYSFVKPHQIPLPKEAEETPVDVKVAEKTPVKAAAAAAHDTPVAAKVTPIRVYKSSHDEEMNQQGYGDSDDYSEGFVGDKRKRSTDNIENCKEFLKRKKNKTREPVVGGTSSYVGVNPTLKDDGDRESVNHVLMTFDSIRRRLCQLEESKELNNALAIKRADLRASNALTCKGFKTNTRRRAGVVPGIEIGDVFFFRMEMCLVGLHAQSMGGIDYMSIKDGSKEDTVALSVVSSGVYGDDTEDNNVLIYSGQGENFNKKDKHVTDQKLQRGNLALDRSAQRHDEVRVIRGVRDPVNRSSKIYMYDGLYKIQDSWIERGKSGGGIFKYKLVRLPGQKIAYAAWKLAQKWKAGSCTRNGFILADLSNGVESIPVSLVNDVDDEKGPAFFTYFTSLKNPKPFGLVQPSLSCNCNTACVPGDLNCSCIQRNEGDFPYTANSILVSRKPLIHECGPMCRCFPTCKNRVSQTGLKQHMEVFRTKGRGWGLRTLDPIRAGTFICEYAGEVINRAKVYQNVEGDNDEYVFDTSRIYEPFKWNYEPSLLEDVSSNVCSEDYTIPSPLIISAKNVGNIARFMNHSCSPNVFWQPVLYAENNQSFIHIAFFALRHIPPMAELTYDYGITHAGHAGGSSAFRRRKKCLCGSAKCRGFFG*