AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1323700


Find 376 sgRNAs with CRISPR-Local

Find 1289 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr8_4 gene 32261554 32280961 32261554 ID=Msa1323700;Name=Msa1323700
chr8_4 mRNA 32261554 32280961 32261554 ID=Msa1323700-mRNA-1;Parent=Msa1323700;Name=Msa1323700-mRNA-1;_AED=0.11;_eAED=0.11;_QI=197|0.84|0.91|0.97|1|1|34|400|1287
chr8_4 exon 32261554 32261985 32261554 ID=Msa1323700-mRNA-1:exon:10495;Parent=Msa1323700-mRNA-1
chr8_4 exon 32262157 32262268 32262157 ID=Msa1323700-mRNA-1:exon:10494;Parent=Msa1323700-mRNA-1
chr8_4 exon 32262726 32262854 32262726 ID=Msa1323700-mRNA-1:exon:10493;Parent=Msa1323700-mRNA-1
chr8_4 exon 32263568 32263627 32263568 ID=Msa1323700-mRNA-1:exon:10492;Parent=Msa1323700-mRNA-1
chr8_4 exon 32263871 32263973 32263871 ID=Msa1323700-mRNA-1:exon:10491;Parent=Msa1323700-mRNA-1
chr8_4 exon 32264054 32264107 32264054 ID=Msa1323700-mRNA-1:exon:10490;Parent=Msa1323700-mRNA-1
chr8_4 exon 32264670 32264788 32264670 ID=Msa1323700-mRNA-1:exon:10489;Parent=Msa1323700-mRNA-1
chr8_4 exon 32264880 32264957 32264880 ID=Msa1323700-mRNA-1:exon:10488;Parent=Msa1323700-mRNA-1
chr8_4 exon 32265252 32265308 32265252 ID=Msa1323700-mRNA-1:exon:10487;Parent=Msa1323700-mRNA-1
chr8_4 exon 32265444 32265567 32265444 ID=Msa1323700-mRNA-1:exon:10486;Parent=Msa1323700-mRNA-1
chr8_4 exon 32265650 32265761 32265650 ID=Msa1323700-mRNA-1:exon:10485;Parent=Msa1323700-mRNA-1
chr8_4 exon 32265891 32266011 32265891 ID=Msa1323700-mRNA-1:exon:10484;Parent=Msa1323700-mRNA-1
chr8_4 exon 32266843 32266930 32266843 ID=Msa1323700-mRNA-1:exon:10483;Parent=Msa1323700-mRNA-1
chr8_4 exon 32267027 32267122 32267027 ID=Msa1323700-mRNA-1:exon:10482;Parent=Msa1323700-mRNA-1
chr8_4 exon 32267827 32267933 32267827 ID=Msa1323700-mRNA-1:exon:10481;Parent=Msa1323700-mRNA-1
chr8_4 exon 32268095 32268230 32268095 ID=Msa1323700-mRNA-1:exon:10480;Parent=Msa1323700-mRNA-1
chr8_4 exon 32268314 32268411 32268314 ID=Msa1323700-mRNA-1:exon:10479;Parent=Msa1323700-mRNA-1
chr8_4 exon 32270201 32270294 32270201 ID=Msa1323700-mRNA-1:exon:10478;Parent=Msa1323700-mRNA-1
chr8_4 exon 32270463 32270635 32270463 ID=Msa1323700-mRNA-1:exon:10477;Parent=Msa1323700-mRNA-1
chr8_4 exon 32270727 32270797 32270727 ID=Msa1323700-mRNA-1:exon:10476;Parent=Msa1323700-mRNA-1
chr8_4 exon 32271712 32271843 32271712 ID=Msa1323700-mRNA-1:exon:10475;Parent=Msa1323700-mRNA-1
chr8_4 exon 32271929 32272028 32271929 ID=Msa1323700-mRNA-1:exon:10474;Parent=Msa1323700-mRNA-1
chr8_4 exon 32272138 32272269 32272138 ID=Msa1323700-mRNA-1:exon:10473;Parent=Msa1323700-mRNA-1
chr8_4 exon 32272358 32272483 32272358 ID=Msa1323700-mRNA-1:exon:10472;Parent=Msa1323700-mRNA-1
chr8_4 exon 32273117 32273198 32273117 ID=Msa1323700-mRNA-1:exon:10471;Parent=Msa1323700-mRNA-1
chr8_4 exon 32273285 32273345 32273285 ID=Msa1323700-mRNA-1:exon:10470;Parent=Msa1323700-mRNA-1
chr8_4 exon 32273767 32273899 32273767 ID=Msa1323700-mRNA-1:exon:10469;Parent=Msa1323700-mRNA-1
chr8_4 exon 32275622 32275699 32275622 ID=Msa1323700-mRNA-1:exon:10468;Parent=Msa1323700-mRNA-1
chr8_4 exon 32275837 32276018 32275837 ID=Msa1323700-mRNA-1:exon:10467;Parent=Msa1323700-mRNA-1
chr8_4 exon 32276984 32277060 32276984 ID=Msa1323700-mRNA-1:exon:10466;Parent=Msa1323700-mRNA-1
chr8_4 exon 32277274 32277404 32277274 ID=Msa1323700-mRNA-1:exon:10465;Parent=Msa1323700-mRNA-1
chr8_4 exon 32277486 32277659 32277486 ID=Msa1323700-mRNA-1:exon:10464;Parent=Msa1323700-mRNA-1
chr8_4 exon 32277778 32277843 32277778 ID=Msa1323700-mRNA-1:exon:10463;Parent=Msa1323700-mRNA-1
chr8_4 exon 32280339 32280961 32280339 ID=Msa1323700-mRNA-1:exon:10462;Parent=Msa1323700-mRNA-1
chr8_4 five_prime_UTR 32280765 32280961 32280765 ID=Msa1323700-mRNA-1:five_prime_utr;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32280339 32280764 32280339 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32277778 32277843 32277778 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32277486 32277659 32277486 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32277274 32277404 32277274 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32276984 32277060 32276984 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32275837 32276018 32275837 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32275622 32275699 32275622 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32273767 32273899 32273767 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32273285 32273345 32273285 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32273117 32273198 32273117 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32272358 32272483 32272358 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32272138 32272269 32272138 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32271929 32272028 32271929 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32271712 32271843 32271712 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32270727 32270797 32270727 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32270463 32270635 32270463 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32270201 32270294 32270201 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32268314 32268411 32268314 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32268095 32268230 32268095 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32267827 32267933 32267827 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32267027 32267122 32267027 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32266843 32266930 32266843 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32265891 32266011 32265891 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32265650 32265761 32265650 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32265444 32265567 32265444 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32265252 32265308 32265252 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32264880 32264957 32264880 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32264670 32264788 32264670 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32264054 32264107 32264054 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32263871 32263973 32263871 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32263568 32263627 32263568 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32262726 32262854 32262726 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32262157 32262268 32262157 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 CDS 32261954 32261985 32261954 ID=Msa1323700-mRNA-1:cds;Parent=Msa1323700-mRNA-1
chr8_4 three_prime_UTR 32261554 32261953 32261554 ID=Msa1323700-mRNA-1:three_prime_utr;Parent=Msa1323700-mRNA-1
Gene Sequence

>Msa1323700

ATGACATCACAACCGTCGATTCCATCTCCTCCTCCGCCATTACCACCGCCACCTGCATCAACGGCACCACCGTCTGACGGCGGCGTTCGTGTTCGTTGCGCCGGTTGTCGGATGATCTTAACTGTAGCGCCTGGACTAACCGAATTCGCTTGTCCTACGTGTCGAATGCCGCAGATGCTTCCGCCGGAACTCATGGCTAGGGTACACCAAACGGCACCGCCGGTAACTCCGCCGACGCAGAATTTGCCGGCGCATGGTATTGATCCTACTAAGATCCAGCTTCCTTGCGCTAAGTGTAAGGCGATTCTCAATGTTCCACATGGATTATCGCGGTTTTCGTGTCCGCAGTGTAATGTTGATCTTGCGGTTGATCTGTCGAAGGTTAAGCAGTTTTTACCTCCGCCGACGCTTGAAGAAGTTAACGAGGTTGCTGTTGAAGTGGAGCGTGATGAAGATGAAGGCGGCATGGCTGGAGAAACATTTACAGATTATCGACCACCAAAAGTATCTATTGGACCTCCGCACCCAGACCCTGTTGTGGAGACATCTTCCTTGTCTGCAGTGCAACCACCGGATCCTACCTATGATCCAAAAACTAAAGATAATTTGGAAAGTTCAAAGGCTTTGTCATGCTTGCAAATTGAGACCTTGGTCTATGCTTGTCAGAGACACCTTCAGCACCTCCCCAGTGGAGCTAGGGCAGGATTTTTTATTGGAGACGGAGCTGGTGTAGGTAAAGGTCGAACAATTGCAGGTCTAATTTGGGAGAACTGGCACCATGGAAGGAGAAAAGCATTGTGGATTTCTGTTGGTTCAGACTTGAAGTTTGATGCTAGAAGAGACTTGGATGATGCGGGCGCAACATGTATTGAAGTGCATGCTTTGAACAAACTGCCTTATTCTAAGCTTGATTCAAAGTCTGTTGGGATCAAGGAGGGAGTTGTTTTCTTGACATACAATAGCCTTATAGCATCTTCAGAGAAAGGTCGTTCTCGTCTCCAGCAGCTTGTGCAGTGGTGTGGACCAGGGTTTGACGGCCTTGTAATTTTTGATGAGTGTCATAAAGCAAAAAATTTGGTCCCTGAAGCTGGTAGTCAGCCAACACGAACCGGAGAAGCAGTGCTTGAAATTCAGGATAAACTACCTGAAGCTCGTGTTGTTTATTGCTCAGCAACTGGTGCATCTGAACCTCGCAATATGGGTTATATGGTTAGACTTGGTCTTTGGGGAGATGGAACTTCTTTCTCCGAGTTCCGGGAATTTCTTGGTGCTCTTGATAGAGGGGGTGTTGGAGCTCTAGAATTAGTTGCCATGGACATGAAAGCAAGGGGGATGTATTTATGTCGGACACTTAGCTATGAGGGTGCCGAGTTTGAAGTTATTGAAGCGCCATTAGAAGATAAAATGATGGACATGTATAAAAAGGCAGCAGAATTTTGGGCAGAATTACGAGTAGAATTGCTGTCAGCTAGTGCCTTCCTAAATGATAAGCCGAACACTAGTCAACTATGGCGATTATACTGGGCAAGCCACCAGCGTTTCTTTAGGCACATGTGTATGTCTGCTAAAGTACCTGCTACTGTAACACTAGCAAAGCAAGCATTAGTTGATGGAAAATGTGTAGTCATTGGTCTTCAGAGTACTGGCGAAGCAAGGACAGAGGAAGCTGGTTCTGAACTTGATGACTTTGTTTCTGGACCTCGGGAATTGCTGCTTAAATTTGTGGAAGAAAATTACCCATTACCAGAAAAACCTCAACTCCTTCCAGGAGAGGATGGTGTTAAGGAGCTTCAAAGGAAGCGGCACTCCGCAACTCCTGATGTTTCATTAAAAGGAAGGGTCAGAAAATCAGCCAAGATGCAGCCTCCTAGTGATGCTGAAAGCGACGAAGAGTCTGAAACTGATTCGGGCATTGAATCTAATGACTCTGATGAGGAGTTTCAGATATGTGAAATTTGCACTACTGAGGAGGAAAGGAAAAAAATGCTACAGTGTTCCTGCTGTGGTAAATTAGTCCATTCTGCATGCTTGATGCCACCAATTGGTGATATAGTTCCTGAAGAGTGGTCATGCCATTTGTGTAAGGAAAAAACAGATGAATACCTTCAAGCAAGGCAGGCCTACATAGCAGAAATCCAGAAGAGGCATGATGCAGCCTTGGAACGTAGGACAAAAATATTAGAGATCATTCGTTCGTTGGATCTTCCAAATAATCCTTTGGATGACATTACTGACCAGCTAGGGGGGCCCGATAAAGTTGCAGAAATTACAGGAAGGAGAGGCATGCTTGTGAGGGGCCCTGCTGGAAAGGGTGTAACTTATCAGGCTCGTAATACAAAGGAAGTCACCATGGAAATGGTTAACATGCATGAAAAGCAGCTTTTTATGGATGGTAAAAAGTTTGTTGCTATAATCTCTGAAGCTGGATCAGCTGGTGTTTCTTTGCAGGCAGATAGGAGAGCAGCAAATCAGAAAAGACGAGTTCATTTAACATTAGAGCTTCCATGGAGTGCTGACCGTGCAATTCAGCAGTTTGGAAGAACTCATAGATCAAATCAAGCTTCGGCACCAGAATACAGGATACTCTTTACTAATCTTGGTGGAGAACGACGATTTGCATCAATTGTTGCGAAGAGATTAGAATCTCTTGGTGCTTTGACTCAGGGGGACCGCAGGGCTGGGCCTTCATTAAGTGCTTATAATTACGACAGTGCTTATGGAAAGAGGGCACTGATGATTATGTACAAAGGAATAATGGAGCAGGATTCTCTACCTGTCGTACCTCCGGGATGTTCATCTGACAGACCAGATACTGTTCAAGATTTCATTATTCAGGCAAAAGCTGCTCTTGTATCTGTTGGGATAGTTAGGGACTCAGTTCTCGGAAATGGTAAAGATTCTGGAAGGTTATCTGGTCGAATTATTGATTCAGATATGCACGAAGTTGGACGATTCCTCAACCGGCTTTTGGGACTACCTCCTGATATTCAGAATGGGCTATTTGAGTTATTTGTGAGTATCTTGGATCTTCTTGTTCGGAATGCTCGCATTGAAGGTAACCTCGACACGGGCATTGTTGACTTGAAGGCTAATGTCATTGAACTACAGGGGACTCCAAAGATCTTGGGATCTTTTCTTTTTATGCCTGCAGAATTGTTTCCTTCTCTTGTAACTAATACAGTTCATGTTGATCAATTGACTGCGGCTTCTACCGTTTTGTTTACATTCATCTTGGATCGTGGGATCACATGGGAGTCAGCAAGTAACATGCTGAATGAAAAACAAAAGGATGGGCTTGGCTCAGCCAATGATGGCTTCTATGAGTCCAAGAGGGAGTGGTTGGGAAAGCGTCATTTCATTTTAGCATTTGAAAGCTCTGCTTCGGGTATGTATAAGATAGTTCGTCCTCCCGTTGGGGAATCAAACCGGGAGATGCCTCTATCTGAATTAAAAAGTAAATACAGAAAAGTTTCATCCTTAGAAAAGGCTCAAACTGGTTGGGAAGAGGAATATGAAGCTTCGTCTAAACAGTCAATGATGGATAGCGTAGCAGATGACCACCAAAACATTATAGTGTTTTGGCAGGTAGAGTGCATGCATGGTCCCAATTGTAAGATTGGCAACTTCTGTACAGTGGGCAGAAGACTACAGGAAGTGAATGTCTTGGGTGGCCTCATTCTTCCTGTTTGGGGAACCATAGAAAAGGCCCTTGCTAAGCAGGCTCGCCTAAGCCATAGGAGGCTACGTGTTGTACGCATAGAAACTACTGTGGATAACAAACGAATTGTTGGACTTCTTGTTCCTAATGCAGCTGTTGAAACTGTGCTTCAAGGTTTAGCGTGGGTTCAAGAAATTGATGATTGA

Protein sequence

>Msa1323700

MTSQPSIPSPPPPLPPPPASTAPPSDGGVRVRCAGCRMILTVAPGLTEFACPTCRMPQMLPPELMARVHQTAPPVTPPTQNLPAHGIDPTKIQLPCAKCKAILNVPHGLSRFSCPQCNVDLAVDLSKVKQFLPPPTLEEVNEVAVEVERDEDEGGMAGETFTDYRPPKVSIGPPHPDPVVETSSLSAVQPPDPTYDPKTKDNLESSKALSCLQIETLVYACQRHLQHLPSGARAGFFIGDGAGVGKGRTIAGLIWENWHHGRRKALWISVGSDLKFDARRDLDDAGATCIEVHALNKLPYSKLDSKSVGIKEGVVFLTYNSLIASSEKGRSRLQQLVQWCGPGFDGLVIFDECHKAKNLVPEAGSQPTRTGEAVLEIQDKLPEARVVYCSATGASEPRNMGYMVRLGLWGDGTSFSEFREFLGALDRGGVGALELVAMDMKARGMYLCRTLSYEGAEFEVIEAPLEDKMMDMYKKAAEFWAELRVELLSASAFLNDKPNTSQLWRLYWASHQRFFRHMCMSAKVPATVTLAKQALVDGKCVVIGLQSTGEARTEEAGSELDDFVSGPRELLLKFVEENYPLPEKPQLLPGEDGVKELQRKRHSATPDVSLKGRVRKSAKMQPPSDAESDEESETDSGIESNDSDEEFQICEICTTEEERKKMLQCSCCGKLVHSACLMPPIGDIVPEEWSCHLCKEKTDEYLQARQAYIAEIQKRHDAALERRTKILEIIRSLDLPNNPLDDITDQLGGPDKVAEITGRRGMLVRGPAGKGVTYQARNTKEVTMEMVNMHEKQLFMDGKKFVAIISEAGSAGVSLQADRRAANQKRRVHLTLELPWSADRAIQQFGRTHRSNQASAPEYRILFTNLGGERRFASIVAKRLESLGALTQGDRRAGPSLSAYNYDSAYGKRALMIMYKGIMEQDSLPVVPPGCSSDRPDTVQDFIIQAKAALVSVGIVRDSVLGNGKDSGRLSGRIIDSDMHEVGRFLNRLLGLPPDIQNGLFELFVSILDLLVRNARIEGNLDTGIVDLKANVIELQGTPKILGSFLFMPAELFPSLVTNTVHVDQLTAASTVLFTFILDRGITWESASNMLNEKQKDGLGSANDGFYESKREWLGKRHFILAFESSASGMYKIVRPPVGESNREMPLSELKSKYRKVSSLEKAQTGWEEEYEASSKQSMMDSVADDHQNIIVFWQVECMHGPNCKIGNFCTVGRRLQEVNVLGGLILPVWGTIEKALAKQARLSHRRLRVVRIETTVDNKRIVGLLVPNAAVETVLQGLAWVQEIDD*